RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LVRN (Homo sapiens)

Ensembl gene IDs: ENSG00000172901

Ensembl transcript IDs: ENST00000357872.9, ENST00000395528.6, ENST00000503203.5, ENST00000503329.5, ENST00000504467.5, ENST00000512314.5, ENST00000512413.1, ENST00000514509.5, ENST00000515454.5

Found 685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGCCTTCATCTCCACTATGGCCTCCACCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACAATCATTTGTCTTTTTGTGACACCA +
Preference number: 1 (lower is better)
Translates to: QSLHLHYGLHHSKPK*TSMDPTIICLFVTP
Trigger: TGGTGTCACAAAAAGACAAATGATTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGAGAGAAATGGGCAGGAGAAGACACA +
Preference number: 1 (lower is better)
Translates to: FCDTIKFSNQQHVVQ*RMYCGREKWAGEDT
Trigger: TGTGTCTTCTCCTGCCCATTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR TCA 90 bp GTACCTTTAGACAAGGAAAAGGCATCATCAATCAACTGCAGTCTGTaGATAACAGGAATCGCCTGCAGAATTAGACCCAAATATGCCCAG +
Preference number: 1 (lower is better)
Translates to: VPLDKEKASSINCSL*ITGIACRIRPKYAQ
Trigger: CTGGGCATATTTGGGTCTAATTCTGCAGGCGATTCCTGTTATTCACAGACTGCAGTTGATTGATGATGCCTTTTCCTTGTCTAAAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512314.5
3UTR TCA 90 bp TGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTC +
Preference number: 1 (lower is better)
Translates to: CYCLLTSLFSLVRLG*KGVHPTGEYTIKSF
Trigger: GAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR GCA 90 bp ACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGTATaGCATACTATAATTTCATCTTCTTCAGCAAGGTACTTGGTTAAC +
Preference number: 1 (lower is better)
Translates to: TSETRSLVTKFTKTV*HTIISSSSARYLVN
Trigger: GTTAACCAAGTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPLVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAATCCCACAGCCTCCCCTaGCACTCAGGGAGAATCCTC +
Preference number: 2 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKSHSLP*HSGRIL
Trigger: GAGGATTCTCCCTGAGTGTCAGGGGAGGCTGTGGGA...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATCGTTTGTCCACGTGGTaGAGTCCCACAGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYRLSTW*SPTASP
Trigger: AGGGGAGGCTGTGGGACTTCACCACGTGGACAAACG...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 2 (lower is better)
Translates to: STMASTTASLSALPWILQMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 2 (lower is better)
Translates to: QAMCFSLATQLSWHLASCPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 2 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 2 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKLVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTCTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 2 (lower is better)
Translates to: KKSFATYRPTSDEATTSILVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 2 (lower is better)
Translates to: STMASTTASLSALPWILQVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 2 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 2 (lower is better)
Translates to: QAMCFSLATQLSWHLASCPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPSMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 2 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRADYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCTCAAACTTAATCCCCTaGGTGCAAAACTGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRASNLIP*VQNCKD
Trigger: ATCCTTACAGTTTTGCACTCAGGGGATTAAGTTTGA...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHQHVVQ*RMYCGR
Trigger: TCTCCCACAGTACATCCTGCATTGAACCACGTGTTG...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAATCAACTGCAGTCTGTaGATAACAGGAATCGCCTGC +
Preference number: 2 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKINCSL*ITGIAC
Trigger: GCAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR GCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACA +
Preference number: 2 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSHSKPK*TSMDPT
Trigger: TGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTG...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 2 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTISMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAGTATCCATGGGTCTTTaGTGCAGCTCATTGCATAAG +
Preference number: 2 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIVSMGL*CSSLHK
Trigger: CTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACTAAGTGCACTTCCATaGATCCTACAATCATTTGTC +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPLSALP*ILQSFV
Trigger: GACAAATGATTGTAGGATCCATGGAAGTGCACTTAG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR CAA 90 bp GGATGTACTGTGGGAGAGAGAAATGGGCAGGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAATTGTCTCCTCTTTCTTTTTCAACT +
Preference number: 2 (lower is better)
Translates to: GCTVGERNGQEKTHF*PLGLVKLSPLSFST
Trigger: AGTTGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTCCTGCCCATTTCTCTCTCCCACAGTACATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATTGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: CFSLATQLSWHLASCFSDCEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTAGTCTGAGTAGCCTGTaGTTTCGTTTGTCCACGTGG +
Preference number: 2 (lower is better)
Translates to: PDTQGESSCESNTKANVCSLSSL*FRLSTW
Trigger: CCACGTGGACAAACGAAAGCACAGGCTACTCAGACT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 2 (lower is better)
Translates to: QAMCFSLATQLSWHLASCLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 2 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: QAMCFSLATQLSWHLASCLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 2 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: KIATSYVFLLSHAAILALRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGAAACCCAAGCAAAGTTaGCAGTCCTTCCATTTCAAT +
Preference number: 2 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMKPKQS*QSFHFN
Trigger: ATTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR TCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 2 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFCEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR TCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 2 (lower is better)
Translates to: QAMCFSLATQLSWHLASCISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: PDTQGESSCESNTKANVCQHVVQ*RMYCGR
Trigger: TCTCCCACAGTACATCCTGCATTGAACCACGTGTTG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACA +
Preference number: 2 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCHSKPK*TSMDPT
Trigger: TGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTG...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATCAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 2 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 2 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 2 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTAAGTGCACTTCCATaGATCCTACAATCATTTGTC +
Preference number: 2 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHLSALP*ILQSFV
Trigger: GACAAATGATTGTAGGATCCATGGAAGTGCACTTAG...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATATCAACTGCAGTCTGTaGATAACAGGAATCGCCTGC +
Preference number: 2 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHINCSL*ITGIAC
Trigger: GCAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
3UTR-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR GCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTTGTTCCATGTTTCAATaGATGACTTCAATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: KIATSYVFLLSHAAILALCSMFQ*MTSIRH
Trigger: ATGCCTTATTGAAGTCATGCATTGAAACATGGAACA...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 2 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 2 (lower is better)
Translates to: PDTQGESSCESNTKANVCVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATCAGAAACAAGATCCCTaGTTACCAAGTTTACCAAGA +
Preference number: 2 (lower is better)
Translates to: CFSLATQLSWHLASCFSDQKQDP*LPSLPR
Trigger: TCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTG...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: PDTQGESSCESNTKANVCPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAGGGAGAATCCTCTTGTaGATCAAATACAAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKGRILL*IKYKSK
Trigger: TTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCC...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTATGCCCAGAAGAAGATaGGAACATTTTTCCGCAAAG +
Preference number: 2 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSMPRRR*EHFSAK
Trigger: CTTTGCGGAAAAATGTTCTCATCTTCTTCTGGGCAT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
3UTR-3UTR GCA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTATAACAGGAATCGCCTaGAGAATTAGACCCAAATAT +
Preference number: 2 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFITGIA*RIRPKY
Trigger: ATATTTGGGTCTAATTCTGCAGGCGATTCCTGTTAT...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
3UTR-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 2 (lower is better)
Translates to: PDTQGESSCESNTKANVCINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATATGTGTAAAGTAAGTTaGTCCACATTACAAGTAGGT +
Preference number: 2 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYMCKVS*STLQVG
Trigger: ACCTACTTGTAATGTGGACCAACTTACTTTACACAT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: PTNTQLQKVFPVILELSSPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTTCAAACTTAATCCCCTaGGTGCAAAACTGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVSNLIP*VQNCKD
Trigger: ATCCTTACAGTTTTGCACTCAGGGGATTAAGTTTGA...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTAAGTGTCCAAAGTCTTaGAGGTTAGACAAGGAAAAG +
Preference number: 2 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVKCPKS*RLDKEK
Trigger: CTTTTCCTTGTCTAACCTTCAAGACTTTGGACACTT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR GCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCTTTCTTTTTCAACTTaGTTTTCTTTGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCLSFST*FSLAPL
Trigger: CAGTGGAGCCAAAGAAAAGCAAGTTGAAAAAGAAAG...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGCTTTCTTTTTCAACTTaGTTTTCTTTGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMLSFST*FSLAPL
Trigger: CAGTGGAGCCAAAGAAAAGCAAGTTGAAAAAGAAAG...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 2 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 2 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAATGCCCAGAAGAAGATaGGAACATTTTTCCGCAAAG +
Preference number: 2 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIMPRRR*EHFSAK
Trigger: CTTTGCGGAAAAATGTTCTCATCTTCTTCTGGGCAT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
3UTR-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCTAAGTGCACTTCCATaGATCCTACAATCATTTGTC +
Preference number: 2 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHLSALP*ILQSFV
Trigger: GACAAATGATTGTAGGATCCATGGAAGTGCACTTAG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: PTNTQLQKVFPVILELSSRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAATCAAACTTAATCCCCTaGGTGCAAAACTGTAAGGAT +
Preference number: 2 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKSNLIP*VQNCKD
Trigger: ATCCTTACAGTTTTGCACTCAGGGGATTAAGTTTGA...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR GCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATATAACAGGAATCGCCTaGAGAATTAGACCCAAATAT +
Preference number: 2 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHITGIA*RIRPKY
Trigger: ATATTTGGGTCTAATTCTGCAGGCGATTCCTGTTAT...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
3UTR-3UTR GCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 2 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 2 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSIEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 2 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 2 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 2 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 2 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTTTCTTTTTCAACTTaGTTTTCTTTGGCTCCACTG +
Preference number: 2 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKLSFST*FSLAPL
Trigger: CAGTGGAGCCAAAGAAAAGCAAGTTGAAAAAGAAAG...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 2 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGTTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 2 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTGTTCCATGTTTCAATaGATGACTTCAATAAGGCAT +
Preference number: 2 (lower is better)
Translates to: KIPFALNSSLYLLLSFDICSMFQ*MTSIRH
Trigger: ATGCCTTATTGAAGTCATGCATTGAAACATGGAACA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAA +
Preference number: 3 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAEKTHF*PLGLVK
Trigger: TTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 3 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRATACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAATCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 3 (lower is better)
Translates to: STMASTTASLSALPWILQSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAACAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 3 (lower is better)
Translates to: STMASTTASLSALPWILQQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 3 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACGGATCCTACAATCATTaGTCTTTTTGTGACACCATA +
Preference number: 3 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDGSYNH*SFCDTI
Trigger: TATGGTGTCACAAAAAGACAAATGATTGTAGGATCC...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACAAGTAGGTTCAATTaGGCCAAAAGACACTATGTT +
Preference number: 3 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRATSRFN*AKRHYV
Trigger: AACATAGTGTCTTTTGGCCAAATTGAACCTACTTGT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 3 (lower is better)
Translates to: QAMCFSLATQLSWHLASCLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR GCA 72 bp ACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGAGAGAAATGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: TIKFSNQQHVVQ*RMYCGREKWAG
Trigger: TCCTGCCCATTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 3 (lower is better)
Translates to: QAMCFSLATQLSWHLASCQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATGTCTTTTGACATCATaGTTTTCACTCGTACGCTTA +
Preference number: 3 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPCLLTS*FSLVRL
Trigger: TAAGCGTACGAGTGAAAACAATGATGTCAAAAGACA...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 3 (lower is better)
Translates to: SYVFLLSHAAILALSFLFSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 3 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 3 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 3 (lower is better)
Translates to: LTKKSFATYRPTSDEATTQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: SYVFLLSHAAILALSFLFRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTCAACTTGCTTTTCTTaGGCTCCACTGTCTTCTAGT +
Preference number: 3 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSTCFS*APLSSS
Trigger: ACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTGA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCTCAACTTGCTTTTCTTaGGCTCCACTGTCTTCTAGT +
Preference number: 3 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSSTCFS*APLSSS
Trigger: ACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTGA...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTGTCTTTTGACATCATaGTTTTCACTCGTACGCTTA +
Preference number: 3 (lower is better)
Translates to: QAMCFSLATQLSWHLASCCLLTS*FSLVRL
Trigger: TAAGCGTACGAGTGAAAACAATGATGTCAAAAGACA...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 3 (lower is better)
Translates to: KKSFATYRPTSDEATTSILRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR TCA 72 bp CTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACTGGTGAATACACAATT +
Preference number: 3 (lower is better)
Translates to: LLTSLFSLVRLG*KGVHPTGEYTI
Trigger: AATTGTGTATTCACCAGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: KKSFATYRPTSDEATTSIRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAA +
Preference number: 3 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMEKTHF*PLGLVK
Trigger: TTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTC...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGGGATCCTACAATCATTaGTCTTTTTGTGACACCATA +
Preference number: 3 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMGSYNH*SFCDTI
Trigger: TATGGTGTCACAAAAAGACAAATGATTGTAGGATCC...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR TCA 72 bp AAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATaGCAATATGAGAAGAATGGCACTCTGAGTAATAAA +
Preference number: 3 (lower is better)
Translates to: KLSAITHPQGQT*QYEKNGTLSNK
Trigger: TTTATTACTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAATTAGGGCTCGTTAAATaGTCTCCTCTTTCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKLGLVK*SPLSFS
Trigger: TGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAA...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTGAAACCCAAGCAAAGTaGACAGTCCTTCCATTTCAA +
Preference number: 3 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSETQAK*TVLPFQ
Trigger: TTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTTC...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGGATCCTACAATCATTaGTCTTTTTGTGACACCATA +
Preference number: 3 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFGSYNH*SFCDTI
Trigger: TATGGTGTCACAAAAAGACAAATGATTGTAGGATCC...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTTTAGGGCTCGTTAAATaGTCTCCTCTTTCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCLGLVK*SPLSFS
Trigger: TGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAA...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAA +
Preference number: 3 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIEKTHF*PLGLVK
Trigger: TTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR GCA 72 bp ACAAGATCCCTGGTTACCAAGTTTACCAAGACTGTATaGCATACTATAATTTCATCTTCTTCAGCAAGGTAC +
Preference number: 3 (lower is better)
Translates to: TRSLVTKFTKTV*HTIISSSSARY
Trigger: GTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp CCTGGTTACCAAGTTTACCAAGACTGTATGCCATACTATAATTTCATCTTCTTCAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: PGYQVYQDCMPYYNFIFFRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...GAAGAAGATGAAATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCAAGTGTCCAAAGTCTaGAAGGTTAGACAAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSIQVSKV*KVRQGK
Trigger: TTTTCCTTGTCTAACCTTCAAGACTTTGGACACTTG...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
3UTR-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATACTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 3 (lower is better)
Translates to: SKFCGIITQHEVTSFPEILCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR CCA 72 bp ATATATCATAGATGTTCACCTCAGAAACAAGATCCCTaGTTACCAAGTTTACCAAGACTGTATGCCATACTA +
Preference number: 3 (lower is better)
Translates to: IYHRCSPQKQDP*LPSLPRLYAIL
Trigger: TAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATGATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 3 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 3 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
3UTR-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTGTCTTTTGACATCATaGTTTTCACTCGTACGCTTA +
Preference number: 3 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHCLLTS*FSLVRL
Trigger: TAAGCGTACGAGTGAAAACAATGATGTCAAAAGACA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR-3UTR CAA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 3 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACCGGGGGTCGCCAGTTaGTCGGGGTGGTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPPGVAS*SGWSSP
Trigger: CGGTGACGACCACCCCGAGCAACTGGCGACCCCCGG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGGCCAGGGTGTTCAGTaGTGCGACCCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPGQGVQ*CDPCPS
Trigger: GGAGGGGCAGGGGTCGCAGCACTGAACACCCTGGCC...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACACGCTAACAGGGCCCTaGGCTCGCCCTGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDTLTGP*ARPGRC
Trigger: ACACCGACCAGGGCGAGCGCAGGGCCCTGTTAGCGT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGCTCGCGTGCACTGCTaGGTTTCGGGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAARVHC*VSGLAS
Trigger: CGACGCCAACCCCGAAACCCAGCAGTGCACGCGAGC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACGGCTTCCAAGTCCCTaGGTCCAGGCAGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPRLPSP*VQAAPT
Trigger: CGTCGGAGCTGCCTGGACTCAGGGACTTGGAAGCCG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCAGGGTGTTCAGTGCTaGGACCCCTGCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDQGVQC*DPCPSS
Trigger: AGAGGAGGGGCAGGGGTCGCAGCACTGAACACCCTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCAGCAGCAGGGCCACTaGGCGGCTCACATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDQQQGH*AAHIEA
Trigger: GGCTTCTATGTGAGCCGCGCAGTGGCCCTGCTGCTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAGTTGGCGTCGGCTTCTaGCTGAGGGGAGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: STMASTTASLSALPWILQVGVGF*LRGGED
Trigger: GTCTTCCCCTCCCCTCAGGCAGAAGCCGACGCCAAC...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCGTTGGCGTCGGCTTCTaGCTGAGGGGAGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFVGVGF*LRGGED
Trigger: GTCTTCCCCTCCCCTCAGGCAGAAGCCGACGCCAAC...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCTAGCTCGCGTGCACTaGTGGGTTTCGGGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDLARVH*WVSGLA
Trigger: CGCCAACCCCGAAACCCAGCAGTGCACGCGAGCTAG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTCTGTGGCGTTCCCAGTaGCCGGGGAAAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALLWRSQ*PGKGVP
Trigger: GGGGACCCCTTTCCCCGGGCACTGGGAACGCCACAG...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGCTGGGTTTCGGGGTTaGCGTCGGCTTCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAAGFRG*RRLLPE
Trigger: CTCAGGCAGAAGCCGACGCCAACCCCGAAACCCAGC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCGCACGCGGCCCACTGTaGCGTTCCCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLARGPL*RSQCPG
Trigger: CCCCGGGCACTGGGAACGCCACAGTGGGCCGCGTGC...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCAGTGCTGCGACCCCTaGCCCTCCTCTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDQCCDP*PSSLVS
Trigger: CGATACAAGAGAGGAGGGGCAGGGGTCGCAGCACTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTGGGACGCGCTCGCAGTaGCCGTACAAGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFGTRSQ*PYKAAS
Trigger: ACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCC...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAAGGCAGCTCCGACGGTaGGACGCGCTCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKRQLRR*DALAVA
Trigger: GGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCT...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCAGGCAGCTCCGACGGTaGGACGCGCTCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLRQLRR*DALAVA
Trigger: GGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCT...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGGCAGCAGTCGAGAGGTaGCCACCGTGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMAAVER*PPCSAP
Trigger: CGGTGCGCTGCACGGTGGCCACCTCTCGACTGCTGC...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGAGCCTGGACGGACTaGAGCTCAGCAGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRARAWTD*SSADSG
Trigger: ACCGCTGTCTGCTGAGCTCCAGTCCGTCCAGGCTCT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACGTTTGTCCACGTGGTaGAGTCCCACAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPRLSTW*SPTASP
Trigger: AGGGGAGGCTGTGGGACTTCACCACGTGGACAAACG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATGGCCAGGGTGTTCAGTaGTGCGACCCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDGQGVQ*CDPCPS
Trigger: GGAGGGGCAGGGGTCGCAGCACTGAACACCCTGGCC...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGTCGTCGGGCCTCAGCTaGGGCCACAGCTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMSSGLS*GHSSRS
Trigger: CGATCTGGAGCTGTGGCCGCAGCTGAGGCCCGACGA...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAGCTCGCGTGCACTGCTaGGTTTCGGGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLARVHC*VSGLAS
Trigger: CGACGCCAACCCCGAAACCCAGCAGTGCACGCGAGC...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTGCACGCGGCCCACTGTaGCGTTCCCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCARGPL*RSQCPG
Trigger: CCCCGGGCACTGGGAACGCCACAGTGGGCCGCGTGC...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357872.9
CDS-3UTR TCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTGTTCACGCGGCCAGTaGAGGGCAAAGACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYCSRGQ*RAKTRP
Trigger: CGGCCGGGTCTTTGCCCTTCACTGGCCGCGTGAACA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATTGTTCACGCGGCCAGTaGAGGGCAAAGACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDCSRGQ*RAKTRP
Trigger: CGGCCGGGTCTTTGCCCTTCACTGGCCGCGTGAACA...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRALVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCAGGGTGTTCAGTGCTaGGACCCCTGCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMQGVQC*DPCPSS
Trigger: AGAGGAGGGGCAGGGGTCGCAGCACTGAACACCCTG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGGCCAGGGTGTTCAGTaGTGCGACCCCTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFGQGVQ*CDPCPS
Trigger: GGAGGGGCAGGGGTCGCAGCACTGAACACCCTGGCC...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCCTAGCTCGCGTGCACTaGTGGGTTTCGGGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTLARVH*WVSGLA
Trigger: CGCCAACCCCGAAACCCAGCAGTGCACGCGAGCTAG...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCCGGGGGTCGCCAGTTaGTCGGGGTGGTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCPGVAS*SGWSSP
Trigger: CGGTGACGACCACCCCGAGCAACTGGCGACCCCCGG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTCGTCGGGCCTCAGCTaGGGCCACAGCTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSSGLS*GHSSRS
Trigger: CGATCTGGAGCTGTGGCCGCAGCTGAGGCCCGACGA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCTCGTCGGGCCTCAGCTaGGGCCACAGCTCCAGATCG +
Preference number: 4 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLSSGLS*GHSSRS
Trigger: CGATCTGGAGCTGTGGCCGCAGCTGAGGCCCGACGA...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTCTGTGGCGTTCCCAGTaGCCGGGGAAAGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFLWRSQ*PGKGVP
Trigger: GGGGACCCCTTTCCCCGGGCACTGGGAACGCCACAG...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357872.9
CDS-3UTR CCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGGGACGCGCTCGCAGTaGCCGTACAAGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFGTRSQ*PYKAAS
Trigger: ACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCC...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAGCTGGGTTTCGGGGTTaGCGTCGGCTTCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIAGFRG*RRLLPE
Trigger: CTCAGGCAGAAGCCGACGCCAACCCCGAAACCCAGC...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATGCCAGTTGCTCGGGGTaGTCGTCACCGCTAGCTCGC +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDASCSG*SSPLAR
Trigger: GCGAGCTAGCGGTGACGACCACCCCGAGCAACTGGC...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTGCTCACATAGAAGCCTaGGCTGGAAGGGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFAHIEA*AGRGPH
Trigger: ATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGC...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTGCGTCGGCTTCTGCCTaGGGGGAGGGGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSASASA*GEGKTR
Trigger: CCGAGTCTTCCCCTCCCCTCAGGCAGAAGCCGACGC...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAGGAAGAGTCCCTCCCTaGGGTCTTCCTTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIGRVPP*GLPSPG
Trigger: GCCTGGTGAAGGAAGACCTCAGGGAGGGACTCTTCC...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAACCTGTGGCCAAGTCTaGGTAGCCTGTGCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: STMASTTASLSALPWILQTCGQV*VACAFV
Trigger: AACGAAAGCACAGGCTACTCAGACTTGGCCACAGGT...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCAGAGGCACTGCGGAGTaGCTGGGCTGGGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTRGTAE*LGWGPY
Trigger: ATAAGGTCCCCAGCCCAGTCACTCCGCAGTGCCTCT...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503329.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTCAGTGCTGCGACCCCTaGCCCTCCTCTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFQCCDP*PSSLVS
Trigger: CGATACAAGAGAGGAGGGGCAGGGGTCGCAGCACTG...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATCAGCAGCAGGGCCACTaGGCGGCTCACATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDQQQGH*AAHIEA
Trigger: GGCTTCTATGTGAGCCGCGCAGTGGCCCTGCTGCTG...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTGGAAGGGGGCCCCATaGCAGGGACCGGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMWKGAP*QGPGSG
Trigger: GCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCA...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGGGGACGCGCTCGCAGTaGCCGTACAAGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMGTRSQ*PYKAAS
Trigger: ACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCC...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGCGTCGGCTTCTGCCTaGGGGGAGGGGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVASASA*GEGKTR
Trigger: CCGAGTCTTCCCCTCCCCTCAGGCAGAAGCCGACGC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDSSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTCCCACAGCCTCCCCTaGCACTCAGGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSHSLP*HSGRIL
Trigger: GAGGATTCTCCCTGAGTGTCAGGGGAGGCTGTGGGA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACGTTTGTCCACGTGGTaGAGTCCCACAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKRLSTW*SPTASP
Trigger: AGGGGAGGCTGTGGGACTTCACCACGTGGACAAACG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAACCGGGGGTCGCCAGTTaGTCGGGGTGGTCGTCACCG +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKPGVAS*SGWSSP
Trigger: CGGTGACGACCACCCCGAGCAACTGGCGACCCCCGG...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTTCCTGGAAGAGGCTATaGAGCAGCAGTCGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALSWKRL*SSSREV
Trigger: CACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGA...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGACGCTAACAGGGCCCTaGGCTCGCCCTGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMTLTGP*ARPGRC
Trigger: ACACCGACCAGGGCGAGCGCAGGGCCCTGTTAGCGT...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTACGCTAACAGGGCCCTaGGCTCGCCCTGGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSTLTGP*ARPGRC
Trigger: ACACCGACCAGGGCGAGCGCAGGGCCCTGTTAGCGT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGCCAGTTGCTCGGGGTaGTCGTCACCGCTAGCTCGC +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCASCSG*SSPLAR
Trigger: GCGAGCTAGCGGTGACGACCACCCCGAGCAACTGGC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGCAGCAGTCGAGAGGTaGCCACCGTGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHAAVER*PPCSAP
Trigger: CGGTGCGCTGCACGGTGGCCACCTCTCGACTGCTGC...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPSWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMLVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAAAATTCTCTGACCTATaGCCTGTGGCCAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: STMASTTASLSALPWILQKFSDL*PVAKSE
Trigger: CTCAGACTTGGCCACAGGTCATAGGTCAGAGAATTT...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGTTGGCGTCGGCTTCTaGCTGAGGGGAGGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCVGVGF*LRGGED
Trigger: GTCTTCCCCTCCCCTCAGGCAGAAGCCGACGCCAAC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGCTAGCTCGCGTGCACTaGTGGGTTTCGGGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMLARVH*WVSGLA
Trigger: CGCCAACCCCGAAACCCAGCAGTGCACGCGAGCTAG...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAQHVVQ*RMYCGR
Trigger: TCTCCCACAGTACATCCTGCATTGAACCACGTGTTG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACA +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDHSKPK*TSMDPT
Trigger: TGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATGGAGCTCAGAGACTGTaGCAGCTGTCAAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDGAQRL*QLSKPR
Trigger: CCGGGGTTTTGACAGCTGCCACAGTCTCTGAGCTCC...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAGGCAGCTCCGACGGTaGGACGCGCTCGCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIRQLRR*DALAVA
Trigger: GGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGCCAGTTGCTCGGGGTaGTCGTCACCGCTAGCTCGC +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVASCSG*SSPLAR
Trigger: GCGAGCTAGCGGTGACGACCACCCCGAGCAACTGGC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGAATGTTGGTTCCAGCTaGGACGCTAACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMNVGSS*DANRAL
Trigger: CAGGGCCCTGTTAGCGTCCCAGCTGGAACCAACATT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCAAGTTTCCAAACCACTaGTGTCCAATCTCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFKFPNH*CPISWE
Trigger: CTCCCACGAGATTGGACACCAGTGGTTTGGAAACTT...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATGCACTGCGGAGTGACTaGGCTGGGGACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDALRSD*AGDLIA
Trigger: TGCTATAAGGTCCCCAGCCCAGTCACTCCGCAGTGC...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000503329.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAACGGCTTCCAAGTCCCTaGGTCCAGGCAGCTCCGACG +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKRLPSP*VQAAPT
Trigger: CGTCGGAGCTGCCTGGACTCAGGGACTTGGAAGCCG...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGCGTCGGCTTCTGCCTaGGGGGAGGGGAAGACTCGG +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIASASA*GEGKTR
Trigger: CCGAGTCTTCCCCTCCCCTCAGGCAGAAGCCGACGC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCCCTTTCTGTTCTGTTaGCGTGGTCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDPFLFC*RGHSHI
Trigger: TATGTGACTATGACCACGTCAACAGAACAGAAAGGG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCTGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRACEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAACAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: STMASTTASLSALPWILQQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGACCTGTGGCCAAGTCTaGGTAGCCTGTGCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMTCGQV*VACAFV
Trigger: AACGAAAGCACAGGCTACTCAGACTTGGCCACAGGT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTAGAGGCACTGCGGAGTaGCTGGGCTGGGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSRGTAE*LGWGPY
Trigger: ATAAGGTCCCCAGCCCAGTCACTCCGCAGTGCCTCT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503329.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGCTGCAGCTCGTAGCTaGTACCAGGTTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFAAARS*YQVSGA
Trigger: AGCCCCTGAAACCTGGTAGCAGCTACGAGCTGCAGC...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCCTTTCCGGGCCCAGATaGGTATCTCCTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSLSGPR*VSPCPF
Trigger: AAAGGGGCAAGGAGATACGCATCTGGGCCCGGAAAG...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATCTTTCCGGGCCCAGATaGGTATCTCCTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDLSGPR*VSPCPF
Trigger: AAAGGGGCAAGGAGATACGCATCTGGGCCCGGAAAG...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACACTTCCATTTGCAATTaGATCTTTCCGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDTSICN*IFPGPD
Trigger: ATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFSMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGTATCCATGGGTCTTTaGTGCAGCTCATTGCATAAG +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAVSMGL*CSSLHK
Trigger: CTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTGGAAGGGGGCCCCATaGCAGGGACCGGGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIWKGAP*QGPGSG
Trigger: GCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATGCTCGCGTGCACTGCTaGGTTTCGGGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHARVHC*VSGLAS
Trigger: CGACGCCAACCCCGAAACCCAGCAGTGCACGCGAGC...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAGCAGCAGTCGAGAGGTaGCCACCGTGCAGCGCACCG +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKAAVER*PPCSAP
Trigger: CGGTGCGCTGCACGGTGGCCACCTCTCGACTGCTGC...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGCGCGCTCGCAGTCCTaGAAGAGGCTATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVARSQS*KRLCSS
Trigger: GCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACTGGAAAACCACTCTaGTGTGTCCAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRATGKPL*CVQLSI
Trigger: AATGGACAGTTGGACACACCAGAGTGGTTTTCCAGT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTGACCTATGACCTGTaGCCAAGTCTGAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHLTYDL*PSLSSL
Trigger: CAGGCTACTCAGACTTGGCCACAGGTCATAGGTCAG...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGGCACTGCGGAGTGACTaGGCTGGGGACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLALRSD*AGDLIA
Trigger: TGCTATAAGGTCCCCAGCCCAGTCACTCCGCAGTGC...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTTGTTCACGCGGCCAGTaGAGGGCAAAGACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFCSRGQ*RAKTRP
Trigger: CGGCCGGGTCTTTGCCCTTCACTGGCCGCGTGAACA...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAGTTTCAGGGGCTCACTaGGCTCCAGCACCATGTATT +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKVSGAH*APAPCI
Trigger: AATACATGGTGCTGGAGCTCAGTGAGCCCCTGAAAC...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTGTTTCAGGGGCTCACTaGGCTCCAGCACCATGTATT +
Preference number: 4 (lower is better)
Translates to: KKSFATYRPTSDEATTSIVSGAH*APAPCI
Trigger: AATACATGGTGCTGGAGCTCAGTGAGCCCCTGAAAC...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGAAGAGTCCCTCCCTaGGGTCTTCCTTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHGRVPP*GLPSPG
Trigger: GCCTGGTGAAGGAAGACCTCAGGGAGGGACTCTTCC...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACCCTTTCTGTTCTGTTaGCGTGGTCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPPFLFC*RGHSHI
Trigger: TATGTGACTATGACCACGTCAACAGAACAGAAAGGG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKSSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPCEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVSWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: QAMCFSLATQLSWHLASCVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGTCCTCTCTTGTATCGTaGCTCTTCCTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVSSLVS*LFLLEE
Trigger: CTCTTCCAGGAGGAAGAGGCACGATACAAGAGAGGA...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTCAGTGCTGCGACCCCTaGCCCTCCTCTCTTGTATCG +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVQCCDP*PSSLVS
Trigger: CGATACAAGAGAGGAGGGGCAGGGGTCGCAGCACTG...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTCCTGGAAGAGGCTATaGAGCAGCAGTCGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFSWKRL*SSSREV
Trigger: CACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAACTTCCATTTGCAATTaGATCTTTCCGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPTSICN*IFPGPD
Trigger: ATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATGCGCGCTCGCAGTCCTaGAAGAGGCTATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHARSQS*KRLCSS
Trigger: GCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGC...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAGGGAAAACATACCTaGCAAATGTTGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAKGKHT*QMLVPA
Trigger: AGCTGGAACCAACATTTGCCAGGTATGTTTTCCCTT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACTAGCTTTGGCATGTTaGAAAGGGCCACATAACTTG +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPLALAC*KGPHNL
Trigger: CAAGTTATGTGGCCCTTTCCAACATGCCAAAGCTAG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACTACTCTGGTCATCTATaGCCATTTGAAAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDYSGHL*PFENAS
Trigger: GGAGGCATTTTCAAATGGCCATAGATGACCAGAGTA...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFNTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAATCAACTGCAGTCTGTaGATAACAGGAATCGCCTTA +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPINCSL*ITGIAL
Trigger: TAAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATACCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTCCCACAGCCTCCCCTaGCACTCAGGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHSHSLP*HSGRIL
Trigger: GAGGATTCTCCCTGAGTGTCAGGGGAGGCTGTGGGA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGTATGCCATACTATAATTTCCCACAGCCTCCCCTaGCACTCAGGGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: ETRSLVTKFTKTVCHTIISHSLP*HSGRIL
Trigger: GAGGATTCTCCCTGAGTGTCAGGGGAGGCTGTGGGA...AATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR GCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTCCTCTCTTGTATCGTaGCTCTTCCTCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSSLVS*LFLLEE
Trigger: CTCTTCCAGGAGGAAGAGGCACGATACAAGAGAGGA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357872.9
CDS-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCCAGGGTGTTCAGTGCTaGGACCCCTGCCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIQGVQC*DPCPSS
Trigger: AGAGGAGGGGCAGGGGTCGCAGCACTGAACACCCTG...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCCAGCAGCAGGGCCACTaGGCGGCTCACATAGAAGCC +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIQQQGH*AAHIEA
Trigger: GGCTTCTATGTGAGCCGCGCAGTGGCCCTGCTGCTG...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGCTGCAGCTCGTAGCTaGTACCAGGTTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVAAARS*YQVSGA
Trigger: AGCCCCTGAAACCTGGTAGCAGCTACGAGCTGCAGC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCTTTCCGGGCCCAGATaGGTATCTCCTTGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCLSGPR*VSPCPF
Trigger: AAAGGGGCAAGGAGATACGCATCTGGGCCCGGAAAG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAGTCTGCACTTCCATTTaGAATTGCATCTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIVCTSI*NCIFPG
Trigger: GCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGAC...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATAGTCTGAGTAGCCTGTaGTTTCGTTTGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYSLSSL*FRLSTW
Trigger: CCACGTGGACAAACGAAAGCACAGGCTACTCAGACT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAATTGTGTTCCATACCTaGTCAAAGTGTGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPIVFHT*SKCGCS
Trigger: ACTACAGCCACACTTTGAGCAGGTATGGAACACAAT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAGCGCGCTCGCAGTCCTaGAAGAGGCTATGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKARSQS*KRLCSS
Trigger: GCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGC...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTAATGTTGGTTCCAGCTaGGACGCTAACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCNVGSS*DANRAL
Trigger: CAGGGCCCTGTTAGCGTCCCAGCTGGAACCAACATT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTAGTTGCCTTCAGAGCTaGCTCATCAAAACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QAMCFSLATQLSWHLASCSCLQS*LIKTRE
Trigger: TTCCCTTGTTTTGATGAGCCAGCTCTGAAGGCAACT...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAATCCATGTGTCATTGCTaGTTAGAAGAGTCCGATTTT +
Preference number: 4 (lower is better)
Translates to: STMASTTASLSALPWILQSMCHC*LEESDF
Trigger: AAAATCGGACTCTTCTAACCAGCAATGACACATGGA...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCCTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ATSYVFLLSHAAILALSFLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCAGAAACAAGATCCCTaGTTACCAAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAQKQDP*LPSLPR
Trigger: TCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTGCCACGCAGCTATCCTaGCACTTAGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFATQLS*HLASCF
Trigger: AAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGC...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGCCTTCATCTCCACTATaGCCTCCACCACAGCAAGCC +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMPSSPL*PPPQQA
Trigger: GGCTTGCTGTGGTGGAGGCCATAGTGGAGATGAAGG...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCCTCCTGGAAGAGCCTaGACGGACTGGAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHPPGRA*TDWSSA
Trigger: TGCTGAGCTCCAGTCCGTCCAGGCTCTTCCAGGAGG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAGCTCACATAGAAGCCTaGGCTGGAAGGGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKAHIEA*AGRGPH
Trigger: ATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGC...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGCTCACATAGAAGCCTaGGCTGGAAGGGGGCCCCAT +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIAHIEA*AGRGPH
Trigger: ATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTGGAAGAGTCCCTCCCTaGGGTCTTCCTTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFGRVPP*GLPSPG
Trigger: GCCTGGTGAAGGAAGACCTCAGGGAGGGACTCTTCC...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATACCCTTTCTGTTCTGTTaGCGTGGTCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIPFLFC*RGHSHI
Trigger: TATGTGACTATGACCACGTCAACAGAACAGAAAGGG...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR TCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATAGAAGATGGGACCTGTaGTGTTCAAAGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHRRWDL*CSKQSL
Trigger: CAGACTTTGCTTTGAACATCACAGGTCCCATCTTCT...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCCAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCGTTTGTCCACGTGGTaGAGTCCCACAGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFRLSTW*SPTASP
Trigger: AGGGGAGGCTGTGGGACTTCACCACGTGGACAAACG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTACCTGTGGCCAAGTCTaGGTAGCCTGTGCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCTCGQV*VACAFV
Trigger: AACGAAAGCACAGGCTACTCAGACTTGGCCACAGGT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATAAATTCTCTGACCTATaGCCTGTGGCCAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYKFSDL*PVAKSE
Trigger: CTCAGACTTGGCCACAGGTCATAGGTCAGAGAATTT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAAAATTCTCTGACCTATaGCCTGTGGCCAAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKKFSDL*PVAKSE
Trigger: CTCAGACTTGGCCACAGGTCATAGGTCAGAGAATTT...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAAGAGGCACTGCGGAGTaGCTGGGCTGGGGACCTTAT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKRGTAE*LGWGPY
Trigger: ATAAGGTCCCCAGCCCAGTCACTCCGCAGTGCCTCT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000503329.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTTCCTGGAAGAGGCTATaGAGCAGCAGTCGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVSWKRL*SSSREV
Trigger: CACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGA...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCGCTGCAGCTCGTAGCTaGTACCAGGTTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSIAAARS*YQVSGA
Trigger: AGCCCCTGAAACCTGGTAGCAGCTACGAGCTGCAGC...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACTCAAAATAAGATaGAAAACCCTCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAKLKIR*KTLVEP
Trigger: TGGCTCAACGAGGGTTTTGCATCTTATTTTGAGTTT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATGTATCCATGGGTCTTTaGTGCAGCTCATTGCATAAG +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHVSMGL*CSSLHK
Trigger: CTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTAGTCTGAGTAGCCTGTaGTTTCGTTTGTCCACGTGG +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFSLSSL*FRLSTW
Trigger: CCACGTGGACAAACGAAAGCACAGGCTACTCAGACT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTATTGTGTTCCATACCTaGTCAAAGTGTGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: QAMCFSLATQLSWHLASCIVFHT*SKCGCS
Trigger: ACTACAGCCACACTTTGAGCAGGTATGGAACACAAT...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATGGAGCTCAGAGACTGTaGCAGCTGTCAAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHGAQRL*QLSKPR
Trigger: CCGGGGTTTTGACAGCTGCCACAGTCTCTGAGCTCC...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCCTAGCTTTGGCATGTTaGAAAGGGCCACATAACTTG +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTLALAC*KGPHNL
Trigger: CAAGTTATGTGGCCCTTTCCAACATGCCAAAGCTAG...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTTACTCTGGTCATCTATaGCCATTTGAAAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALYSGHL*PFENAS
Trigger: GGAGGCATTTTCAAATGGCCATAGATGACCAGAGTA...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCTTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAGCCACGCAGCTATCCTaGCACTTAGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKATQLS*HLASCF
Trigger: AAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGC...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCGCCACGCAGCTATCCTaGCACTTAGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSATQLS*HLASCF
Trigger: AAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGC...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGCTGACCTATGACCTGTaGCCAAGTCTGAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMLTYDL*PSLSSL
Trigger: CAGGCTACTCAGACTTGGCCACAGGTCATAGGTCAG...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp ATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTGCTGTTTCAATCTCAGCACTGCGGAGTGACTaGGCTGGGGACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: ISSSSARYLVNSSAVSISALRSD*AGDLIA
Trigger: TGCTATAAGGTCCCCAGCCCAGTCACTCCGCAGTGC...TGAGATTGAAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
3UTR CAA 72 bp TTTCTGGATGATCCACCCATTTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAAC +
Preference number: 4 (lower is better)
Translates to: FLDDPPILRKVL*TAEGSLQGPTN
Trigger: GTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAATCAACTGCAGTCTGTaGATAACAGGAATCGCCTTA +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKINCSL*ITGIAL
Trigger: TAAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504467.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCSSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KKSFATYRPTSDEATTSIMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAACCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCTCGTACGCTTAGGCTaGAAGGGTGTCCATCCCACT +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHLVRLG*KGVHPT
Trigger: AGTGGGATGGACACCCTTTCAGCCTAAGCGTACGAG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTATGCCCAGAAGAAGATaGGAACATTTTTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFMPRRR*EHFSAK
Trigger: CTTTGCGGAAAAATGTTCTCATCTTCTTCTGGGCAT...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR TCA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTAAACCCAAGCAAAGTTaGCAGTCCTTCCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: QAMCFSLATQLSWHLASCKPKQS*QSFHFN
Trigger: ATTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTT...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAACTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKLGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCGGAGCTCAGAGACTGTaGCAGCTGTCAAAACCCCGG +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIGAQRL*QLSKPR
Trigger: CCGGGGTTTTGACAGCTGCCACAGTCTCTGAGCTCC...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATCTGTTAAGTATCCATaGGTCTTTGCTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTISVKYP*VFAAAH
Trigger: ATGAGCTGCAGCAAAGACCCATGGATACTTAACAGA...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTATGCAGGATGTACTGTaGGAGAGAGAAATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFMQDVL*EREMGR
Trigger: CCTGCCCATTTCTCTCTCCCACAGTACATCCTGCAT...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCAAGTAGGTTCAATTTaGCCAAAAGACACTATGTTT +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDQVGSI*PKDTMF
Trigger: AAACATAGTGTCTTTTGGCCAAATTGAACCTACTTG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCAAGTAGGTTCAATTTaGCCAAAAGACACTATGTTT +
Preference number: 4 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAQVGSI*PKDTMF
Trigger: AAACATAGTGTCTTTTGGCCAAATTGAACCTACTTG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACATGTGTAAAGTAAGTTaGTCCACATTACAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDMCKVS*STLQVG
Trigger: ACCTACTTGTAATGTGGACCAACTTACTTTACACAT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCTCTTCTTTTTCAGACTaGCCTAGCTTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSSSFSD*PSFGML
Trigger: CAACATGCCAAAGCTAGGTCAGTCTGAAAAAGAAGA...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCTCTTCTTTTTCAGACTaGCCTAGCTTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFSSFSD*PSFGML
Trigger: CAACATGCCAAAGCTAGGTCAGTCTGAAAAAGAAGA...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTCTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATCATCTATGGCCATTTaGAAATGCCTCCATAGATCA +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTISSMAI*KCLHRS
Trigger: TGATCTATGGAGGCATTTTCAAATGGCCATAGATGA...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAATCATCTATGGCCATTTaGAAATGCCTCCATAGATCA +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKSSMAI*KCLHRS
Trigger: TGATCTATGGAGGCATTTTCAAATGGCCATAGATGA...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAATCAACTGCAGTCTGTaGATAACAGGAATCGCCTTA +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKINCSL*ITGIAL
Trigger: TAAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp AAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSFATYRPTSDEATTSIICEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...TATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTATCAACTGCAGTCTGTaGATAACAGGAATCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLINCSL*ITGIAC
Trigger: GCAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR TCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAAAGTGTCCAAAGTCTTaGAGGTTAGACAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIKCPKS*RLDKEK
Trigger: CTTTTCCTTGTCTAACCTTCAAGACTTTGGACACTT...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGTCTGCACTTCCATTTaGAATTGCATCTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCVCTSI*NCIFPG
Trigger: GCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGAC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTGTCTGCACTTCCATTTaGAATTGCATCTTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFVCTSI*NCIFPG
Trigger: GCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGAC...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR GCA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFLGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCCTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFLGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGTTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFSMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: LLTAEGSLQGPTNTQLQKMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...TTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTATAACAGGAATCGCCTaGAGAATTAGACCCAAATAT +
Preference number: 4 (lower is better)
Translates to: KIATSYVFLLSHAAILALITGIA*RIRPKY
Trigger: ATATTTGGGTCTAATTCTGCAGGCGATTCCTGTTAT...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR GCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCATTGTGTTCCATACCTaGTCAAAGTGTGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFIVFHT*SKCGCS
Trigger: ACTACAGCCACACTTTGAGCAGGTATGGAACACAAT...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCAATGTTGGTTCCAGCTaGGACGCTAACAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDINVGSS*DANRAL
Trigger: CAGGGCCCTGTTAGCGTCCCAGCTGGAACCAACATT...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATAAGGGAAAACATACCTaGCAAATGTTGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYKGKHT*QMLVPA
Trigger: AGCTGGAACCAACATTTGCCAGGTATGTTTTCCCTT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGAAGTTTCCAAACCACTaGTGTCCAATCTCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMKFPNH*CPISWE
Trigger: CTCCCACGAGATTGGACACCAGTGGTTTGGAAACTT...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCTACTCTGGTCATCTATaGCCATTTGAAAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFYSGHL*PFENAS
Trigger: GGAGGCATTTTCAAATGGCCATAGATGACCAGAGTA...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGACTGGAAAACCACTCTaGTGTGTCCAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLTGKPL*CVQLSI
Trigger: AATGGACAGTTGGACACACCAGAGTGGTTTTCCAGT...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATCCATGTGTCATTGCTaGTTAGAAGAGTCCGATTTT +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTISMCHC*LEESDF
Trigger: AAAATCGGACTCTTCTAACCAGCAATGACACATGGA...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTAAAATCACCCAGTCATaGTCAGAATCTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: SYVFLLSHAAILALSFLFKITQS*SESETC
Trigger: GCAAGTTTCAGATTCTGACCATGACTGGGTGATTTT...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGAAAATCACCCAGTCATaGTCAGAATCTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMKITQS*SESETC
Trigger: GCAAGTTTCAGATTCTGACCATGACTGGGTGATTTT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCAGAAACAAGATCCCTaGTTACCAAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMQKQDP*LPSLPR
Trigger: TCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATACTAAGTGCACTTCCATaGATCCTACAATCATTTGTC +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTILSALP*ILQSFV
Trigger: GACAAATGATTGTAGGATCCATGGAAGTGCACTTAG...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACAAGTAGGTTCAATTTaGCCAAAAGACACTATGTTT +
Preference number: 4 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPQVGSI*PKDTMF
Trigger: AAACATAGTGTCTTTTGGCCAAATTGAACCTACTTG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTAGAAGATGGGACCTGTaGTGTTCAAAGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSRRWDL*CSKQSL
Trigger: CAGACTTTGCTTTGAACATCACAGGTCCCATCTTCT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR TCA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: YVFLLSHAAILALSFLFFGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCTCATCTATGGCCATTTaGAAATGCCTCCATAGATCA +
Preference number: 4 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLSSMAI*KCLHRS
Trigger: TGATCTATGGAGGCATTTTCAAATGGCCATAGATGA...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSCEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTCAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSSWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATTGTAATATTAAAAGTTaGCTTCAGAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHCNIKS*LQSWLI
Trigger: GATGAGCCAGCTCTGAAGGCAACTTTTAATATTACA...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGTGTAATATTAAAAGTTaGCTTCAGAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMCNIKS*LQSWLI
Trigger: GATGAGCCAGCTCTGAAGGCAACTTTTAATATTACA...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGAAACTCAAAATAAGATaGAAAACCCTCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMKLKIR*KTLVEP
Trigger: TGGCTCAACGAGGGTTTTGCATCTTATTTTGAGTTT...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: CFSLATQLSWHLASCFSDLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCTTTCTTTTTCAACTTaGTTTTCTTTGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMLSFST*FSLAPL
Trigger: CAGTGGAGCCAAAGAAAAGCAAGTTGAAAAAGAAAG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTACTGGAAAACCACTCTaGTGTGTCCAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCTGKPL*CVQLSI
Trigger: AATGGACAGTTGGACACACCAGAGTGGTTTTCCAGT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTACTGGAAAACCACTCTaGTGTGTCCAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSTGKPL*CVQLSI
Trigger: AATGGACAGTTGGACACACCAGAGTGGTTTTCCAGT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAAGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: LTKKSFATYRPTSDEATTRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGTTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 4 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATAAACCCTAGGGCCTaGAAAAACTGTTATTTCCCT +
Preference number: 4 (lower is better)
Translates to: KKSFATYRPTSDEATTSIINPRA*KNCYFP
Trigger: AGGGAAATAACAGTTTTTCCAGGCCCTAGGGTTTAT...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CCA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGCAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGCTGACCTATGACCTGTaGCCAAGTCTGAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLLTYDL*PSLSSL
Trigger: CAGGCTACTCAGACTTGGCCACAGGTCATAGGTCAG...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATAATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KSFATYRPTSDEATTSIIILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...TATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTATCAACTGCAGTCTGTaGATAACAGGAATCGCCTTA +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCINCSL*ITGIAL
Trigger: TAAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GTATGCCATACTATAATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: VCHTIISSSSARYLVNSSSSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...ACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAAGTTCTTTTGACAGCTaGAGGCAGTCTTCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKSSFDS*RQSSRP
Trigger: GGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCCGGCCAACTTCAGATaGAGCCACAACCTCAATTAT +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHPANFR*SHNLNY
Trigger: ATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATGCCATACTATAATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VCHTIISSSSARYLVNSSSWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...ACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAGTTGGCATGAACTCTaGTCCTCTGGTGTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEISWHEL*SSGVPP
Trigger: TGGAGGAACACCAGAGGATCAGAGTTCATGCCAACT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTCCAAACATGACAATATaGGAAGAATGGCACTCTGAG +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLPNMTI*EEWHSE
Trigger: CTCAGAGTGCCATTCTTCTCATATTGTCATGTTTGG...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTGGGAGAATCCTCTTGTaGATCAAATACAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: KKSFATYRPTSDEATTSIGRILL*IKYKSK
Trigger: TTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCC...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTATCAACTGCAGTCTGTaGATAACAGGAATCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSINCSL*ITGIAC
Trigger: GCAGGCGATTCCTGTTATTCACAGACTGCAGTTGAT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TTAACAAGATGTCCCACTCTTTATCACTTCCCAAGGCAATGCCATAACATAAAACAACACGTGGTTCAATaGAGGATGTACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LTRCPTLYHFPRQCHNIKQHVVQ*RMYCGR
Trigger: TCTCCCACAGTACATCCTGCATTGAACCACGTGTTG...TTTTATGTTATGGCATTGCCTTGGGAAGTGATAAAGAGTGGGACATCTTGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR GCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACA +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHHSKPK*TSMDPT
Trigger: TGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTATTGTGTTCCATACCTaGTCAAAGTGTGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFIVFHT*SKCGCS
Trigger: ACTACAGCCACACTTTGAGCAGGTATGGAACACAAT...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTAAGGGAAAACATACCTaGCAAATGTTGGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLKGKHT*QMLVPA
Trigger: AGCTGGAACCAACATTTGCCAGGTATGTTTTCCCTT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CCA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAAAGGGCCACATAACTTaGATGATGAATCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIKGHIT*MMNHCN
Trigger: ATTACAATGATTCATCATCCAAGTTATGTGGCCCTT...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTTACTCTGGTCATCTATaGCCATTTGAAAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFYSGHL*PFENAS
Trigger: GGAGGCATTTTCAAATGGCCATAGATGACCAGAGTA...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATCCATGTGTCATTGCTaGTTAGAAGAGTCCGATTTT +
Preference number: 4 (lower is better)
Translates to: KSFATYRPTSDEATTSIISMCHC*LEESDF
Trigger: AAAATCGGACTCTTCTAACCAGCAATGACACATGGA...TATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTCAGAAACAAGATCCCTaGTTACCAAGTTTACCAAGA +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFQKQDP*LPSLPR
Trigger: TCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTG...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTCTGTTAAGTATCCATaGGTCTTTGCTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSSVKYP*VFAAAH
Trigger: ATGAGCTGCAGCAAAGACCCATGGATACTTAACAGA...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCGCCACGCAGCTATCCTaGCACTTAGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSIATQLS*HLASCF
Trigger: AAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGC...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGCTAGTCACCAGGGCGTaGTCTTCTCTGAGGATATTA +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLLVTRA*SSLRIL
Trigger: TAATATCCTCAGAGAAGATCACGCCCTGGTGACTAG...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLNTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAACAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTAACAAGATGTCCCACTCTTTATCACTTCCCAAGGCAATGCCATAACATAAAACAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGA +
Preference number: 4 (lower is better)
Translates to: LTRCPTLYHFPRQCHNIKQLASC*LRSLLR
Trigger: TCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTG...TTTTATGTTATGGCATTGCCTTGGGAAGTGATAAAGAGTGGGACATCTTGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGGTCTGTAAGTTGGCATaGACTCTGATCCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLVCKLA*TLILWC
Trigger: ACACCAGAGGATCAGAGTTCATGCCAACTTACAGAC...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTTCAAACTTAATCCCCTaGGTGCAAAACTGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCSNLIP*VQNCKD
Trigger: ATCCTTACAGTTTTGCACTCAGGGGATTAAGTTTGA...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTAAGTGTCCAAAGTCTTaGAGGTTAGACAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSKCPKS*RLDKEK
Trigger: CTTTTCCTTGTCTAACCTTCAAGACTTTGGACACTT...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTAAACCCAAGCAAAGTTaGCAGTCCTTCCATTTCAAT +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCKPKQS*QSFHFN
Trigger: ATTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTGTATCCATGGGTCTTTaGTGCAGCTCATTGCATAAG +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSVSMGL*CSSLHK
Trigger: CTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCAACACGTGGTTCAATaGAGGATGTACTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFQHVVQ*RMYCGR
Trigger: TCTCCCACAGTACATCCTGCATTGAACCACGTGTTG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp GTATGCCATACTATAATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTCACAGCAAGCCTAAGTaGACTTCCATGGATCCTACA +
Preference number: 4 (lower is better)
Translates to: VCHTIISSSSARYLVNSSHSKPK*TSMDPT
Trigger: TGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTG...ACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR GCA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTTGTTCCATGTTTCAATaGATGACTTCAATAAGGCAT +
Preference number: 4 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFCSMFQ*MTSIRH
Trigger: ATGCCTTATTGAAGTCATGCATTGAAACATGGAACA...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAAAGTTTCCAAACCACTaGTGTCCAATCTCGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKKFPNH*CPISWE
Trigger: CTCCCACGAGATTGGACACCAGTGGTTTGGAAACTT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGGTTTTCAAGATAAAATaGCTCCTGTTTCATGACGCC +
Preference number: 4 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMVFKIK*LLFHDA
Trigger: GGCGTCATGAAACAGGAGCCATTTTATCTTGAAAAC...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTAAAATCACCCAGTCATaGTCAGAATCTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCKITQS*SESETC
Trigger: GCAAGTTTCAGATTCTGACCATGACTGGGTGATTTT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCTTCAGCAAGGTACTTaGTTAACTCAAGTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PDTQGESSCESNTKANVCLQQGT*LTQVLF
Trigger: AAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGCCACGCAGCTATCCTaGCACTTAGCTTCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIATQLS*HLASCF
Trigger: AAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTAGAAGATGGGACCTGTaGTGTTCAAAGCAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFRRWDL*CSKQSL
Trigger: CAGACTTTGCTTTGAACATCACAGGTCCCATCTTCT...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGGGCGTGATCTTCTCTaGGGATATTATGTAAAATGT +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVGRDLL*GYYVKC
Trigger: ACATTTTACATAATATCCTCAGAGAAGATCACGCCC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTATCTTGCTCAGCGTTTaGGTAGGAAAATGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVILLSV*VGKCLQ
Trigger: TTGAAGACATTTTCCTACTCAAACGCTGAGCAAGAT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVNTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHNTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTGCGAAAAGTTCTTTTaGCAGCTGAAGGCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDICEKFF*QLKAVF
Trigger: GAAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAATGCAAGAGGAGTGCTaGAAGATAGCCACAAGCTAT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKMQEEC*KIATSY
Trigger: ATAGCTTGTGGCTATCTTTCAGCACTCCTCTTGCAT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGGGAGAATCCTCTTGTaGATCAAATACAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCGRILL*IKYKSK
Trigger: TTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TTAACAAGATGTCCCACTCTTTATCACTTCCCAAGGCAATGCCATAACATAAAAATGCCCAGAAGAAGATaGGAACATTTTTCCGCAAAG +
Preference number: 4 (lower is better)
Translates to: LTRCPTLYHFPRQCHNIKMPRRR*EHFSAK
Trigger: CTTTGCGGAAAAATGTTCTCATCTTCTTCTGGGCAT...TTTTATGTTATGGCATTGCCTTGGGAAGTGATAAAGAGTGGGACATCTTGTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAACTTCCATTTGCAATTaGATCTTTCCGGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKTSICN*IFPGPD
Trigger: ATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHLGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSILGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTTTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAATCCATGGGTCTTTGCTaGAGCTCATTGCATAAGCAA +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKSMGLC*SSLHKQ
Trigger: TTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGA...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCGTATCCATGGGTCTTTaGTGCAGCTCATTGCATAAG +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIVSMGL*CSSLHK
Trigger: CTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTATAACAGGAATCGCCTaGAGAATTAGACCCAAATAT +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLITGIA*RIRPKY
Trigger: ATATTTGGGTCTAATTCTGCAGGCGATTCCTGTTAT...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000512314.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAAGTTGCCTTCAGAGCTaGCTCATCAAAACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKSCLQS*LIKTRE
Trigger: TTCCCTTGTTTTGATGAGCCAGCTCTGAAGGCAACT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTAGTTGCCTTCAGAGCTaGCTCATCAAAACAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFSCLQS*LIKTRE
Trigger: TTCCCTTGTTTTGATGAGCCAGCTCTGAAGGCAACT...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCCTAGCTTTGGCATGTTaGAAAGGGCCACATAACTTG +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDILALAC*KGPHNL
Trigger: CAAGTTATGTGGCCCTTTCCAACATGCCAAAGCTAG...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTCAGTTTTCCATTGCATaGTTGTCAAAACTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVQFSIA*LSKLGK
Trigger: CTTGCCTAGTTTTGACAACCATGCAATGGAAAACTG...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAATACTCTGGTCATCTATaGCCATTTGAAAATGCCTCC +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKYSGHL*PFENAS
Trigger: GGAGGCATTTTCAAATGGCCATAGATGACCAGAGTA...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAACTGGAAAACCACTCTaGTGTGTCCAACTGTCCATT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKTGKPL*CVQLSI
Trigger: AATGGACAGTTGGACACACCAGAGTGGTTTTCCAGT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTCTGTTAAGTATCCATaGGTCTTTGCTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHSVKYP*VFAAAH
Trigger: ATGAGCTGCAGCAAAGACCCATGGATACTTAACAGA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTTCTGTTAAGTATCCATaGGTCTTTGCTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSSVKYP*VFAAAH
Trigger: ATGAGCTGCAGCAAAGACCCATGGATACTTAACAGA...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTTTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 4 (lower is better)
Translates to: SFATYRPTSDEATTSIIFFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GTATGCCATACTATAATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTGTAACCAGCAACACGTaGTTCAATGCAGGATGTACT +
Preference number: 4 (lower is better)
Translates to: VCHTIISSSSARYLVNSSVTSNT*FNAGCT
Trigger: AGTACATCCTGCATTGAACCACGTGTTGCTGGTTAC...ACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAATTATAGTATGGCATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CCA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTATGTGTAAAGTAAGTTaGTCCACATTACAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFMCKVS*STLQVG
Trigger: ACCTACTTGTAATGTGGACCAACTTACTTTACACAT...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
3UTR CAA 72 bp GTCCCATCTTATAGAAAGGATGAAACCCAAGCAAAGTaGACAGTCCTTCCATTTCAATTTGGTACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VPSYRKDETQAK*TVLPFQFGTFK
Trigger: CTTGAAAGTACCAAATTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTTCATCCTTTCTATAAGATGGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTCTTCTTTTTCAGACTaGCCTAGCTTTGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISSFSD*PSFGML
Trigger: CAACATGCCAAAGCTAGGTCAGTCTGAAAAAGAAGA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR TCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTTCATCTATGGCCATTTaGAAATGCCTCCATAGATCA +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSSSMAI*KCLHRS
Trigger: TGATCTATGGAGGCATTTTCAAATGGCCATAGATGA...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHNTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFVMVRI*NLHFWE
Trigger: TTCCCAGAAATGCAAGTTTCAGATTCTGACCATGAC...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCCTGGGAATACTTTGCTaGTTTGATCTAGCCAGACTA +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDILGILC*FDLARL
Trigger: TAGTCTGGCTAGATCAAAGCAGCAAAGTATTCCCAG...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAG +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSLLLTA*QLLTKK
Trigger: CTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAG...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTCTTTCTTTTTCAACTTaGTTTTCTTTGGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVLSFST*FSLAPL
Trigger: CAGTGGAGCCAAAGAAAAGCAAGTTGAAAAAGAAAG...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTCCATGTGTCATTGCTaGTTAGAAGAGTCCGATTTT +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHSMCHC*LEESDF
Trigger: AAAATCGGACTCTTCTAACCAGCAATGACACATGGA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTAAAATCACCCAGTCATaGTCAGAATCTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSKITQS*SESETC
Trigger: GCAAGTTTCAGATTCTGACCATGACTGGGTGATTTT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTTCTGTTAAGTATCCATaGGTCTTTGCTGCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFSVKYP*VFAAAH
Trigger: ATGAGCTGCAGCAAAGACCCATGGATACTTAACAGA...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCAACTTGCTTTTCTTTaGCTCCACTGTCTTCTAGTG +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFQLAFL*LHCLLV
Trigger: CACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTCTAAGTGCACTTCCATaGATCCTACAATCATTTGTC +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSLSALP*ILQSFV
Trigger: GACAAATGATTGTAGGATCCATGGAAGTGCACTTAG...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTCATCTATGGCCATTTaGAAATGCCTCCATAGATCA +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISSMAI*KCLHRS
Trigger: TGATCTATGGAGGCATTTTCAAATGGCCATAGATGA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAATACTTTGCTGCTTTaGTCTAGCCAGACTAAAGGT +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEINTLLL*SSQTKG
Trigger: ACCTTTAGTCTGGCTAGATCAAAGCAGCAAAGTATT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCATTTCATTTTCTGGATaGTCCACCCATTTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSIISFSG*STHFAK
Trigger: TTTCGCAAAATGGGTGGATCATCCAGAAAATGAAAT...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp TTAACAAGATGTCCCACTCTTTATCACTTCCCAAGGCAATGCCATAACATAAAAAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: LTRCPTLYHFPRQCHNIKRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...TTTTATGTTATGGCATTGCCTTGGGAAGTGATAAAGAGTGGGACATCTTGTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGGATTATAACCCAACATaGAGTGACATCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLDYNPT*SDIFPR
Trigger: TCTGGGAAAGATGTCACTTCATGTTGGGTTATAATC...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTCAAACTTAATCCCCTaGGTGCAAAACTGTAAGGAT +
Preference number: 4 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISNLIP*VQNCKD
Trigger: ATCCTTACAGTTTTGCACTCAGGGGATTAAGTTTGA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR TCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGAGAATCCTCTTGTaGATCAAATACAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKGRILL*IKYKSK
Trigger: TTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCC...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAATTTCTGGGAATACTTTaGTGCTTTGATCTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKFLGIL*CFDLAR
Trigger: TCTGGCTAGATCAAAGCAGCAAAGTATTCCCAGAAA...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAATGTTACTGAAAAACTaGTGCAGCTCCACAATCTGT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKMLLKN*CSSTIC
Trigger: ACAGATTGTGGAGCTGCAGCAGTTTTTCAGTAACAT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTAAGGGCCACATAACTTaGATGATGAATCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVKGHIT*MMNHCN
Trigger: ATTACAATGATTCATCATCCAAGTTATGTGGCCCTT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATACAGTTTTCCATTGCATaGTTGTCAAAACTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIQFSIA*LSKLGK
Trigger: CTTGCCTAGTTTTGACAACCATGCAATGGAAAACTG...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACAGTTTTCCATTGCATaGTTGTCAAAACTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKQFSIA*LSKLGK
Trigger: CTTGCCTAGTTTTGACAACCATGCAATGGAAAACTG...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTTCCATGTGTCATTGCTaGTTAGAAGAGTCCGATTTT +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFSMCHC*LEESDF
Trigger: AAAATCGGACTCTTCTAACCAGCAATGACACATGGA...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAAAAATCACCCAGTCATaGTCAGAATCTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKKITQS*SESETC
Trigger: GCAAGTTTCAGATTCTGACCATGACTGGGTGATTTT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAATTCATTAGAAGTGAATaGAGATGTGCTGATGGCATA +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKFIRSE*RCADGI
Trigger: TATGCCATCAGCACATCTCCATTCACTTCTAATGAA...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp GAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGTATGCCATACTATAATTGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: ETRSLVTKFTKTVCHTIIEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...AATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR TCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAGAAGAATGGCACTCTaGGTAATAAATGTGACTGAA +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIRRMAL*VINVTE
Trigger: TTCAGTCACATTTATTACTCAGAGTGCCATTCTTCT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATATGTAATATTAAAAGTTaGCTTCAGAGCTGGCTCATC +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEICNIKS*LQSWLI
Trigger: GATGAGCCAGCTCTGAAGGCAACTTTTAATATTACA...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAAAACTCAAAATAAGATaGAAAACCCTCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIKLKIR*KTLVEP
Trigger: TGGCTCAACGAGGGTTTTGCATCTTATTTTGAGTTT...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR GCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAATTTGCTGCAGCTCATTaGATAAGCAAGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKFAAAH*ISKLNL
Trigger: AAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAA...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR GCA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTTGTTCCATGTTTCAATaGATGACTTCAATAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PTNTQLQKVFPVILELSSCSMFQ*MTSIRH
Trigger: ATGCCTTATTGAAGTCATGCATTGAAACATGGAACA...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CCA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAAAGGGCCACATAACTTaGATGATGAATCATTGTAAT +
Preference number: 4 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKKGHIT*MMNHCN
Trigger: ATTACAATGATTCATCATCCAAGTTATGTGGCCCTT...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGAGGTATTTCATTTTCTaGATGATCCACCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLRYFIF*MIHPFC
Trigger: GCAAAATGGGTGGATCATCCAGAAAATGAAATACCT...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CCA 90 bp GTATATATTAGATTAATCAATGATTGTGTTCCATACCTGCTCAAAGTGTGGCTGGAAATACAGCAGCATTaGCAAAATTGTCAGCAATCA +
Preference number: 4 (lower is better)
Translates to: VYIRLINDCVPYLLKVWLEIQQH*QNCQQS
Trigger: TGATTGCTGACAATTTTGCCAATGCTGCTGTATTTC...CAGCCACACTTTGAGCAGGTATGGAACACAATCATTGATTAATCTAATATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CCA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAATGTGTAAAGTAAGTTaGTCCACATTACAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKMCKVS*STLQVG
Trigger: ACCTACTTGTAATGTGGACCAACTTACTTTACACAT...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS CCA 90 bp AAGTCCCTGAGTCCAGGCAGCTCCGACGGTGGGACGCGCTCGCAGTaGCCGTACAAGGCGGCGAGTACGGCCAGCGCCAGCAGGAGGGCG +
Preference number: 5 (lower is better)
Translates to: KSLSPGSSDGGTRSQ*PYKAASTASASRRA
Trigger: CGCCCTCCTGCTGGCGCTGGCCGTACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCTGGACTCAGGGACTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 90 bp CAGCCAGCAGCAGGGCCACTGCGCGGCTCACATAGAAGCCTGAGCTaGAAGGGGGCCCCATGGCAGGGACCGGGTTCAGGCGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QPAAGPLRGSHRSLS*KGAPWQGPGSGARL
Trigger: CAGCCTCGCGCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGCCGCGCAGTGGCCCTGCTGCTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 90 bp AGGGGTCCCCGCACCTCGGCGCGCTCGCAGTCCTGGAAGAGGCTATaGAGCAGCAGTCGAGAGGTGGCCACCGTGCAGCGCACCGTGATG +
Preference number: 5 (lower is better)
Translates to: RGPRTSARSQSWKRL*SSSREVATVQRTVM
Trigger: CATCACGGTGCGCTGCACGGTGGCCACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGCCGAGGTGCGGGGACCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 90 bp GGAAGACTCGGCTTCCAAGTCCCTGAGTCCAGGCAGCTCCGACGGTaGGACGCGCTCGCAGTGGCCGTACAAGGCGGCGAGTACGGCCAG +
Preference number: 5 (lower is better)
Translates to: GRLGFQVPESRQLRR*DALAVAVQGGEYGQ
Trigger: CTGGCCGTACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCTGGACTCAGGGACTTGGAAGCCGAGTCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 90 bp CCACTGCGCGGCTCACATAGAAGCCTGAGCTGGAAGGGGGCCCCATaGCAGGGACCGGGTTCAGGCGCGAGGCTGGAGCTCAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: PLRGSHRSLSWKGAP*QGPGSGARLELRDC
Trigger: ACAGTCTCTGAGCTCCAGCCTCGCGCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGCCGCGCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 90 bp CAGGGTGTTCAGTGCTGCGACCCCTGCCCCTCCTCTCTTGTATCGTaGCTCTTCCTCCTGGAAGAGCCTGGACGGACTGGAGCTCAGCAG +
Preference number: 5 (lower is better)
Translates to: QGVQCCDPCPSSLVS*LFLLEEPGRTGAQQ
Trigger: CTGCTGAGCTCCAGTCCGTCCAGGCTCTTCCAGGAGGAAGAGGCACGATACAAGAGAGGAGGGGCAGGGGTCGCAGCACTGAACACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCCCGGGGGTCGCCAGTaGCTCGGGGTGGTCGTCACC +
Preference number: 5 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDPGGRQ*LGVVVT
Trigger: GGTGACGACCACCCCGAGCAACTGGCGACCCCCGGG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCCTGCCCCTCCTCTCTaGTATCGTGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAPAPPL*YRASSS
Trigger: GGAGGAAGAGGCACGATACAAGAGAGGAGGGGCAGG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACCTGCCCCTCCTCTCTaGTATCGTGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPPAPPL*YRASSS
Trigger: GGAGGAAGAGGCACGATACAAGAGAGGAGGGGCAGG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 90 bp AGCGGTTCCTGCACTGCTATTGGCGATGTACTCAACTCCAACATGTaGCTTGGTGTGGAGACGATGTCTGTGAGCTTGCCTGCATGTCAC +
Preference number: 5 (lower is better)
Translates to: SGSCTAIGDVLNSNM*LGVETMSVSLPACH
Trigger: GTGACATGCAGGCAAGCTCACAGACATCGTCTCCACACCAAGGCACATGTTGGAGTTGAGTACATCGCCAATAGCAGTGCAGGAACCGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS CCA 90 bp CCAGTGACTTGGGTGGGGCTGTCTCCTAGTGTGGCCACAGGACCCTaGTTAGACCAATTAGAGTATTCCATCTTCCCTGGACACAGTGAT +
Preference number: 5 (lower is better)
Translates to: PVTWVGLSPSVATGP*LDQLEYSIFPGHSD
Trigger: ATCACTGTGTCCAGGGAAGATGGAATACTCTAATTGGTCTAACCAGGGTCCTGTGGCCACACTAGGAGACAGCCCCACCCAAGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515454.5
CDS-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCCCGGGGGTCGCCAGTaGCTCGGGGTGGTCGTCACC +
Preference number: 5 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHPGGRQ*LGVVVT
Trigger: GGTGACGACCACCCCGAGCAACTGGCGACCCCCGGG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCCAGACTGACCTAGCTTaGGCATGTTGGAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ATSYVFLLSHAAILALSFQTDLA*ACWKGP
Trigger: TGGCCCTTTCCAACATGCCAAAGCTAGGTCAGTCTG...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAACCTGCCCCTCCTCTCTaGTATCGTGCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKPAPPL*YRASSS
Trigger: GGAGGAAGAGGCACGATACAAGAGAGGAGGGGCAGG...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACATACCTGGCAAATGTaGGTTCCAGCTGGGACGCTA +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPHTWQM*VPAGTL
Trigger: TAGCGTCCCAGCTGGAACCAACATTTGCCAGGTATG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACAGACTGACCTAGCTTaGGCATGTTGGAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPQTDLA*ACWKGP
Trigger: TGGCCCTTTCCAACATGCCAAAGCTAGGTCAGTCTG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 90 bp GGGACCTGTGATGTTCAAAGCAAAGTCTGCACTTCCATTTGCAATTaGATCTTTCCGGGCCCAGATGCGTATCTCCTTGCCCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GTCDVQSKVCTSICN*IFPGPDAYLLAPFC
Trigger: ACAGAAAGGGGCAAGGAGATACGCATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACTTTGCTTTGAACATCACAGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 90 bp GAAGATGGGACCTGTGATGTTCAAAGCAAAGTCTGCACTTCCATTTaGAATTGCATCTTTCCGGGCCCAGATGCGTATCTCCTTGCCCCT +
Preference number: 5 (lower is better)
Translates to: EDGTCDVQSKVCTSI*NCIFPGPDAYLLAP
Trigger: AGGGGCAAGGAGATACGCATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACTTTGCTTTGAACATCACAGGTCCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCATACCTGGCAAATGTaGGTTCCAGCTGGGACGCTA +
Preference number: 5 (lower is better)
Translates to: QAMCFSLATQLSWHLASCHTWQM*VPAGTL
Trigger: TAGCGTCCCAGCTGGAACCAACATTTGCCAGGTATG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGTCTGCACTTCCATTaGCAATTGCATCTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRASLHFH*QLHLSG
Trigger: CCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACT...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCATACCTGGCAAATGTaGGTTCCAGCTGGGACGCTA +
Preference number: 5 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMHTWQM*VPAGTL
Trigger: TAGCGTCCCAGCTGGAACCAACATTTGCCAGGTATG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS TCA 90 bp ATGTATTTCCAGATTAGGCTTTCTAGGAAGAATTCTGGGCCTGGCTaGAAGGAGCAGCGGTTCCTGCACTGCTATTGGCGATGTACTCAA +
Preference number: 5 (lower is better)
Translates to: MYFQIRLSRKNSGPG*KEQRFLHCYWRCTQ
Trigger: TTGAGTACATCGCCAATAGCAGTGCAGGAACCGCTGCTCCTTTCAGCCAGGCCCAGAATTCTTCCTAGAAAGCCTAATCTGGAAATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS GCA 90 bp GGAAAACAGAGGAAACCTACCTATGGTGCTAAATGTGTGAATTTCTaGCAGACACAGGAGAAAGTTTACCCGAGGAGGCAGGGCTGGATT +
Preference number: 5 (lower is better)
Translates to: GKQRKPTYGAKCVNF*QTQEKVYPRRQGWI
Trigger: AATCCAGCCCTGCCTCCTCGGGTAAACTTTCTCCTGTGTCTGGCAGAAATTCACACATTTAGCACCATAGGTAGGTTTCCTCTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512413.1
CDS-3UTR CAA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATACACTTCCATTTGCAATaGCATCTTTCCGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIHFHLQ*HLSGPR
Trigger: TCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTG...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAACTGTCAGTTGATCTTTaGGTTCCAACAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: STMASTTASLSALPWILQLSVDL*VPTTIL
Trigger: CAGGATTGTTGTTGGAACCAAAAGATCAACTGACAG...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAACATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: STMASTTASLSALPWILQHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp GCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCCATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ATSYVFLLSHAAILALSFHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...GAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACCTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS GCA 90 bp CTCCAGAAAAGAGAAGATGGGACCTGTGATGTTCAAAGCAAAGTCTaGACTTCCATTTGCAATTGCATCTTTCCGGGCCCAGATGCGTAT +
Preference number: 5 (lower is better)
Translates to: LQKREDGTCDVQSKV*TSICNCIFPGPDAY
Trigger: ATACGCATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACTTTGCTTTGAACATCACAGGTCCCATCTTCTCTTTTCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTCAGATGCGTATCTCCTaGCCCCTTTCTGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KKSFATYRPTSDEATTSIQMRIS*PLSVLL
Trigger: CAACAGAACAGAAAGGGGCAAGGAGATACGCATCTG...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: KIATSYVFLLSHAAILALTIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TCCACTATGGCCTCCACCACAGCAAGCCTAAGTGCACTTCCATGGATCCTACAAGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: STMASTTASLSALPWILQDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...TTGTAGGATCCATGGAAGTGCACTTAGGCTTGCTGTGGTGGAGGCCATAGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCACTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CCAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: PEIQQHWQNCQQSPTLRAQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...GGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTCTGTCAGTTGATCTTTaGGTTCCAACAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: KIATSYVFLLSHAAILALLSVDL*VPTTIL
Trigger: CAGGATTGTTGTTGGAACCAAAAGATCAACTGACAG...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTCATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: QAMCFSLATQLSWHLASCHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAA +
Preference number: 5 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHEKTHF*PLGLVK
Trigger: TTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTC...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACTGTCTTTTGACATCATaGTTTTCACTCGTACGCTTA +
Preference number: 5 (lower is better)
Translates to: QQHWQNCQQSPTLRAKHDCLLTS*FSLVRL
Trigger: TAAGCGTACGAGTGAAAACAATGATGTCAAAAGACA...GTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTGAAACCCAAGCAAAGTaGACAGTCCTTCCATTTCAA +
Preference number: 5 (lower is better)
Translates to: QAMCFSLATQLSWHLASCETQAK*TVLPFQ
Trigger: TTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTTC...ACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTCACTTCCATTTGCAATaGCATCTTTCCGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: NGDVLMAYSIYLLSIHGSHFHLQ*HLSGPR
Trigger: TCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTG...AGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp GAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGTTTTCCATTGCATGGTaGTCAAAACTAGGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: EGSLQGPTNTQLQKVFPVFSIAW*SKLGKA
Trigger: TGCCTTGCCTAGTTTTGACAACCATGCAATGGAAAA...CACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTCGTTGAGCCAGATATaGTTCCACCAATTCATGGTA +
Preference number: 5 (lower is better)
Translates to: SYVFLLSHAAILALSFLFSLSQI*FHQFMV
Trigger: TACCATGAATTGGTGGAACAATATCTGGCTCAACGA...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATACATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSTIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTATCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTATTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATATGCTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: HWQNCQQSPTLRAKHDNMLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...CATATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCCTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: LTKKSFATYRPTSDEATTLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: KKSFATYRPTSDEATTSITACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...AATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: YVFLLSHAAILALSFLFFTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAGATAGCCACAAGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: KIATSYVFLLSHAAILALQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...AAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCTTGTGGCTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CAGAAATACAGCAGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAGGATCCTACAATCATTaGTCTTTTTGTGACACCATA +
Preference number: 5 (lower is better)
Translates to: QKYSSIGKIVSNHPPSGPGSYNH*SFCDTI
Trigger: TATGGTGTCACAAAAAGACAAATGATTGTAGGATCC...TGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCTGCTGTATTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCAGACTGACCTAGCTTaGGCATGTTGGAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHQTDLA*ACWKGP
Trigger: TGGCCCTTTCCAACATGCCAAAGCTAGGTCAGTCTG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAGTTGTAACAGTCCATTaGCTTCCATTCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIVVTVH*LPFTSS
Trigger: AGAAGATGTGAATGGAAGCAAATGGACTGTTACAAC...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATTTTTCCATTGCATGGTaGTCAAAACTAGGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYFSIAW*SKLGKA
Trigger: TGCCTTGCCTAGTTTTGACAACCATGCAATGGAAAA...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAATTTTCCATTGCATGGTaGTCAAAACTAGGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKFSIAW*SKLGKA
Trigger: TGCCTTGCCTAGTTTTGACAACCATGCAATGGAAAA...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp ACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTACAAAAAGTTTTTCATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: TAEGSLQGPTNTQLQKVFHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...AAAAACTTTTTGTAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TTGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: LTKKSFATYRPTSDEATTDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...GGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCCTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: YVFLLSHAAILALSFLFFLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AGCTATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: SYVFLLSHAAILALSFLFQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...AAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAAGTTCTTTTGACAGCTGAAGGCAGTCTTCAAGGCCCAACCAACACGCAGTTAAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: KVLLTAEGSLQGPTNTQLRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...TAACTGCGTGTTGGTTGGGCCTTGAAGACTGCCTTCAGCTGTCAAAAGAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AGCATTGGCAAAATTGTCAGCAATCACCCACCCTCAGGGCCAAACATGACAATAAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SIGKIVSNHPPSGPNMTIRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...TATTGTCATGTTTGGCCCTGAGGGTGGGTGATTGCTGACAATTTTGCCAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTACTGTGGGAGAGAGAAATCAACTTGCTTTTCTTaGGCTCCACTGTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: FSNQQHVVQCRMYCGREKSTCFS*APLSSS
Trigger: ACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTGA...TTTCTCTCTCCCACAGTACATCCTGCATTGAACCACGTGTTGCTGGTTACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS TCA 90 bp TCAATGATTGTGTTCCATACCTTTTACTCACAGCTTGCCAGTTGTTaGCTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: SMIVFHTFYSQLASC*LRSLLRHTGQLQMK
Trigger: CTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGGTATGGAACACAATCATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000515454.5
CDS-3UTR CAA 90 bp TATGTGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCGTTGTAACAGTCCATTaGCTTCCATTCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: YVFLLSHAAILALSFLFFVVTVH*LPFTSS
Trigger: AGAAGATGTGAATGGAAGCAAATGGACTGTTACAAC...GAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATCACTTCCATTTGCAATaGCATCTTTCCGGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHHFHLQ*HLSGPR
Trigger: TCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTG...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: PDTQGESSCESNTKANVCTIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: SFATYRPTSDEATTSIIFTIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: PDTQGESSCESNTKANVCTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTGATGGCATACTCCATATATCTGTTAAGTATCCATGGGTCTTTGCTGCAGCTCCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: LMAYSIYLLSIHGSLLQLQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...GAGCTGCAGCAAAGACCCATGGATACTTAACAGATATATGGAGTATGCCATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCCATCCAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: SFDIIVFTRTLRLKGCPSRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...GGATGGACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp AAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATCAACTTGCTTTTCTTaGGCTCCACTGTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: KSFATYRPTSDEATTSIISTCFS*APLSSS
Trigger: ACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTGA...TATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CAA 90 bp GTGTCCATCCCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATTGTCTTTTGACATCATaGTTTTCACTCGTACGCTTA +
Preference number: 5 (lower is better)
Translates to: VSIPLVNTQLRASEQSLHCLLTS*FSLVRL
Trigger: TAAGCGTACGAGTGAAAACAATGATGTCAAAAGACA...ATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGGGATGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTCAGATGCGTATCTCCTaGCCCCTTTCTGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFQMRIS*PLSVLL
Trigger: CAACAGAACAGAAAGGGGCAAGGAGATACGCATCTG...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCCAGATGCGTATCTCCTaGCCCCTTTCTGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: KIPFALNSSLYLLLSFDIQMRIS*PLSVLL
Trigger: CAACAGAACAGAAAGGGGCAAGGAGATACGCATCTG...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAAGTCTGCACTTCCATTaGCAATTGCATCTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKSLHFH*QLHLSG
Trigger: CCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACT...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATAGTCTGCACTTCCATTaGCAATTGCATCTTTCCGGG +
Preference number: 5 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHSLHFH*QLHLSG
Trigger: CCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACT...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS-3UTR CAA 90 bp CCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTCTGTCAGTTGATCTTTaGGTTCCAACAACAATCCTG +
Preference number: 5 (lower is better)
Translates to: PDTQGESSCESNTKANVCLSVDL*VPTTIL
Trigger: CAGGATTGTTGTTGGAACCAAAAGATCAACTGACAG...ACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTCGTTGAGCCAGATATaGTTCCACCAATTCATGGTA +
Preference number: 5 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMSLSQI*FHQFMV
Trigger: TACCATGAATTGGTGGAACAATATCTGGCTCAACGA...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCATCTTGCTCAGCGTTaGAGTAGGAAAATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCHLAQR*SRKMSS
Trigger: TGAAGACATTTTCCTACTCAAACGCTGAGCAAGATG...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVTIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTTCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTCTTCAGCAAGGTACTaGGTTAACTCAAGTGCTGTT +
Preference number: 5 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMSSARY*VNSSAV
Trigger: AACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGA...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTCTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTCTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp GTATCCATGGGTCTTTGCTGCAGCTCATTGCATAAGCAAGTTGAATCTTTTCTTCTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: VSMGLCCSSLHKQVESFLLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...AAGAAAAGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAGACCCATGGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CATAGATGTTCACCTCAGAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: HRCSPQKQDPWLPSLPRLRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...CAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTCTGAGGTGAACATCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TGTTTCTCCTTAGCCACGCAGCTATCCTGGCACTTAGCTTCTTGTTTTTCAGATTTAGGGCTCGTTAAATaGTCTCCTCTTTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: CFSLATQLSWHLASCFSDLGLVK*SPLSFS
Trigger: TGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAA...ATCTGAAAAACAAGAAGCTAAGTGCCAGGATAGCTGCGTGGCTAAGGAGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CAA 90 bp CCACTGGTGAATACACAATTAAGAGCTTCAGAGCAGAGCCTTCATCTCCACTATACAAGTAGGTTCAATTaGGCCAAAAGACACTATGTT +
Preference number: 5 (lower is better)
Translates to: PLVNTQLRASEQSLHLHYTSRFN*AKRHYV
Trigger: AACATAGTGTCTTTTGGCCAAATTGAACCTACTTGT...ATAGTGGAGATGAAGGCTCTGCTCTGAAGCTCTTAATTGTGTATTCACCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAAGGGTGTGAAACCCAAGCAAAGTaGACAGTCCTTCCATTTCAA +
Preference number: 5 (lower is better)
Translates to: LLSFDIIVFTRTLRLKGCETQAK*TVLPFQ
Trigger: TTGAAATGGAAGGACTGTCAACTTTGCTTGGGTTTC...ACACCCTTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CAA 90 bp TTAGAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCACAATCCATGTGTCATaGCTGGTTAGAAGAGTCCGA +
Preference number: 5 (lower is better)
Translates to: LEVNGDVLMAYSIYLLSITIHVS*LVRRVR
Trigger: TCGGACTCTTCTAACCAGCAATGACACATGGATTGT...GATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTCTAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCG +
Preference number: 5 (lower is better)
Translates to: PTNTQLQKVFPVILELSSTACQL*TKKSFA
Trigger: CGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATATTTCAGACTCACAAAGTATaGGAAGACAAAACTGTGAAC +
Preference number: 5 (lower is better)
Translates to: SFATYRPTSDEATTSIIFQTHKV*EDKTVN
Trigger: GTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTG...AAATATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CCCCTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTTTAGGGCTCGTTAAATaGTCTCCTCTTTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: PLTLRENPLVNQIQKQTFLGLVK*SPLSFS
Trigger: TGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAA...AAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAGGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp AAGTCTTTTGCGACATACCGGCCAACTTCAGATGAAGCCACAACCTCAATTATAACAAGTAGGTTCAATTaGGCCAAAAGACACTATGTT +
Preference number: 5 (lower is better)
Translates to: KSFATYRPTSDEATTSIITSRFN*AKRHYV
Trigger: AACATAGTGTCTTTTGGCCAAATTGAACCTACTTGT...TATAATTGAGGTTGTGGCTTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503329.5
CDS-3UTR CAA 90 bp TACTTGCTATTGTCTTTTGACATCATTGTTTTCACTCGTACGCTTAGGCTGAAATTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: YLLLSFDIIVFTRTLRLKLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...TTTCAGCCTAAGCGTACGAGTGAAAACAATGATGTCAAAAGACAATAGCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp GTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTACATTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: VVFQTHKVLEDKTVNKLHLRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...ATGTAGTTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp GAAACAAGATCCCTGGTTACCAAGTTTACCAAGACTGTATGCCATACTATAATTTTGCGAAAAGTTCTTTaGACAGCTGAAGGCAGTCTT +
Preference number: 5 (lower is better)
Translates to: ETRSLVTKFTKTVCHTIILRKVL*TAEGSL
Trigger: AAGACTGCCTTCAGCTGTCAAAAGAACTTTTCGCAA...AATTATAGTATGGCATACAGTCTTGGTAAACTTGGTAACCAGGGATCTTGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp GAAGTGAATGGAGATGTGCTGATGGCATACTCCATATATCTGTTAAGTATCCATGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: EVNGDVLMAYSIYLLSIHDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...ATGGATACTTAACAGATATATGGAGTATGCCATCAGCACATCTCCATTCACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp ATTTCATCTTCTTCAGCAAGGTACTTGGTTAACTCAAGTGCTGTTTCAATCTCACTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: ISSSSARYLVNSSAVSISLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...TGAGATTGAAACAGCACTTGAGTTAACCAAGTACCTTGCTGAAGAAGATGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGTTAGGGCTCGTTAAATaGTCTCCTCTTTCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMLGLVK*SPLSFS
Trigger: TGAAAAAGAAAGAGGAGACAATTTAACGAGCCCTAA...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAAGAGAAGACACACTTCTaGCCTTTAGGGCTCGTTAAA +
Preference number: 5 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKEKTHF*PLGLVK
Trigger: TTTAACGAGCCCTAAAGGCAAGAAGTGTGTCTTCTC...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp TTTTGTGACACCATAAAGTTTAGTAACCAGCAACACGTGGTTCAATGCAGGATGACAAGTAGGTTCAATTaGGCCAAAAGACACTATGTT +
Preference number: 5 (lower is better)
Translates to: FCDTIKFSNQQHVVQCRMTSRFN*AKRHYV
Trigger: AACATAGTGTCTTTTGGCCAAATTGAACCTACTTGT...CATCCTGCATTGAACCACGTGTTGCTGGTTACTAAACTTTATGGTGTCACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp AAGATTCCTTTTGCCCTAAATAGTAGCCTATACTTGCTATTGTCTTTTGACATCTCGTTGAGCCAGATATaGTTCCACCAATTCATGGTA +
Preference number: 5 (lower is better)
Translates to: KIPFALNSSLYLLLSFDISLSQI*FHQFMV
Trigger: TACCATGAATTGGTGGAACAATATCTGGCTCAACGA...GATGTCAAAAGACAATAGCAAGTATAGGCTACTATTTAGGGCAAAAGGAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTTTGCTGCAGCTCATaGCATAAGCAAGTTGAATCT +
Preference number: 5 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKLCCSS*HKQVES
Trigger: AGATTCAACTTGCTTATGCAATGAGCTGCAGCAAAG...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATACTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SKFCGIITQHEVTSFPEILTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AAATGTGTGGTTTTCCAGACTCACAAAGTATTGGAAGACAAAACTGTGAACAAACTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTT +
Preference number: 5 (lower is better)
Translates to: KCVVFQTHKVLEDKTVNKLTACQ*LTKKSF
Trigger: AAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAG...TTTGTTCACAGTTTTGTCTTCCAATACTTTGTGAGTCTGGAAAACCACACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTAGAAATACAGCAGCATaGGCAAAATTGTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: PTNTQLQKVFPVILELSSRNTAA*AKLSAI
Trigger: GATTGCTGACAATTTTGCCAATGCTGCTGTATTTCT...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATATCAACTTGCTTTTCTTaGGCTCCACTGTCTTCTAGT +
Preference number: 5 (lower is better)
Translates to: SKFCGIITQHEVTSFPEISTCFS*APLSSS
Trigger: ACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTGA...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CTGACACTCAGGGAGAATCCTCTTGTGAATCAAATACAAAAGCAAACGTTTGTTGGATCCTACAATCATTaGTCTTTTTGTGACACCATA +
Preference number: 5 (lower is better)
Translates to: LTLRENPLVNQIQKQTFVGSYNH*SFCDTI
Trigger: TATGGTGTCACAAAAAGACAAATGATTGTAGGATCC...AACAAACGTTTGCTTTTGTATTTGATTCACAAGAGGATTCTCCCTGAGTGTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
CDS-3UTR CAA 90 bp CCAACCAACACGCAGTTACAAAAAGTTTTTCCAGTGATATTAGAGCTAAGTAGTCAAGTGTCCAAAGTCTaGAAGGTTAGACAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PTNTQLQKVFPVILELSSQVSKV*KVRQGK
Trigger: TTTTCCTTGTCTAACCTTCAAGACTTTGGACACTTG...ACTACTTAGCTCTAATATCACTGGAAAAACTTTTTGTAACTGCGTGTTGGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS-3UTR CAA 90 bp CAACTTGCTTTTCTTTGGCTCCACTGTCTTCTAGTGAATATACTTTTTGAGTTTGTTGTAACAGTCCATTaGCTTCCATTCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: QLAFLWLHCLLVNILFEFVVTVH*LPFTSS
Trigger: AGAAGATGTGAATGGAAGCAAATGGACTGTTACAAC...AAACTCAAAAAGTATATTCACTAGAAGACAGTGGAGCCAAAGAAAAGCAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357872.9
ENST00000395528.6
CDS-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATAGATGATCCACCCATTTaGCGAAAAGTTCTTTTGACA +
Preference number: 5 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIDDPPI*RKVLLT
Trigger: TGTCAAAAGAACTTTTCGCAAAATGGGTGGATCATC...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5
CDS-3UTR CAA 90 bp AGTAAATTCTGTGGGATTATAACCCAACATGAAGTGACATCTTTCCCAGAAATACAAGTGTCCAAAGTCTaGAAGGTTAGACAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: SKFCGIITQHEVTSFPEIQVSKV*KVRQGK
Trigger: TTTTCCTTGTCTAACCTTCAAGACTTTGGACACTTG...TATTTCTGGGAAAGATGTCACTTCATGTTGGGTTATAATCCCACAGAATTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503329.5
ENST00000514509.5
CDS CCA 72 bp AGTCCAGGCAGCTCCGACGGTGGGACGCGCTCGCAGTaGCCGTACAAGGCGGCGAGTACGGCCAGCGCCAGC +
Preference number: 6 (lower is better)
Translates to: SPGSSDGGTRSQ*PYKAASTASAS
Trigger: GCTGGCGCTGGCCGTACTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCTGGACT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 72 bp CGCACCTCGGCGCGCTCGCAGTCCTGGAAGAGGCTATaGAGCAGCAGTCGAGAGGTGGCCACCGTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: RTSARSQSWKRL*SSSREVATVQR
Trigger: GCGCTGCACGGTGGCCACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGCCGAGGTGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 72 bp GCAGGGCCACTGCGCGGCTCACATAGAAGCCTGAGCTaGAAGGGGGCCCCATGGCAGGGACCGGGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: AGPLRGSHRSLS*KGAPWQGPGSG
Trigger: GCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGCCGCGCAGTGGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 72 bp GGCTTCCAAGTCCCTGAGTCCAGGCAGCTCCGACGGTaGGACGCGCTCGCAGTGGCCGTACAAGGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: GFQVPESRQLRR*DALAVAVQGGE
Trigger: CTCGCCGCCTTGTACGGCCACTGCGAGCGCGTCCCACCGTCGGAGCTGCCTGGACTCAGGGACTTGGAAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS TCA 72 bp CAGCAGCAGGGCCACTGCGCGGCTCACATAGAAGCCTaGGCTGGAAGGGGGCCCCATGGCAGGGACCGGGTT +
Preference number: 6 (lower is better)
Translates to: QQQGHCAAHIEA*AGRGPHGRDRV
Trigger: AACCCGGTCCCTGCCATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGCCGCGCAGTGGCCCTGCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 72 bp GGCTCACATAGAAGCCTGAGCTGGAAGGGGGCCCCATaGCAGGGACCGGGTTCAGGCGCGAGGCTGGAGCTC +
Preference number: 6 (lower is better)
Translates to: GSHRSLSWKGAP*QGPGSGARLEL
Trigger: GAGCTCCAGCCTCGCGCCTGAACCCGGTCCCTGCCATGGGGCCCCCTTCCAGCTCAGGCTTCTATGTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 72 bp GAAAGGGGTCCCCGCACCTCGGCGCGCTCGCAGTCCTaGAAGAGGCTATGCAGCAGCAGTCGAGAGGTGGCC +
Preference number: 6 (lower is better)
Translates to: ERGPRTSARSQS*KRLCSSSREVA
Trigger: GGCCACCTCTCGACTGCTGCTGCATAGCCTCTTCCAGGACTGCGAGCGCGCCGAGGTGCGGGGACCCCTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CCA 72 bp CCTGCCCCTCCTCTCTTGTATCGTGCCTCTTCCTCCTaGAAGAGCCTGGACGGACTGGAGCTCAGCAGACAG +
Preference number: 6 (lower is better)
Translates to: PAPPLLYRASSS*KSLDGLELSRQ
Trigger: CTGTCTGCTGAGCTCCAGTCCGTCCAGGCTCTTCCAGGAGGAAGAGGCACGATACAAGAGAGGAGGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504467.5
CDS TCA 72 bp GCAGCTCGTAGCTGCTACCAGGTTTCAGGGGCTCACTaGGCTCCAGCACCATGTATTCCGTGTCCAGCGCGA +
Preference number: 6 (lower is better)
Translates to: AARSCYQVSGAH*APAPCIPCPAR
Trigger: TCGCGCTGGACACGGAATACATGGTGCTGGAGCTCAGTGAGCCCCTGAAACCTGGTAGCAGCTACGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CAA 72 bp GCCTGGCTGAAAGGAGCAGCGGTTCCTGCACTGCTATaGGCGATGTACTCAACTCCAACATGTGCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: AWLKGAAVPALL*AMYSTPTCALV
Trigger: CACCAAGGCACATGTTGGAGTTGAGTACATCGCCAATAGCAGTGCAGGAACCGCTGCTCCTTTCAGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS CAA 90 bp GAATTCTGGGCCTGGCTGAAAGGAGCAGCGGTTCCTGCACTGCTATaGGCGATGTACTCAACTCCAACATGTGCCTTGGTGTGGAGACGA +
Preference number: 6 (lower is better)
Translates to: EFWAWLKGAAVPALL*AMYSTPTCALVWRR
Trigger: TCGTCTCCACACCAAGGCACATGTTGGAGTTGAGTACATCGCCAATAGCAGTGCAGGAACCGCTGCTCCTTTCAGCCAGGCCCAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS GCA 72 bp AGAATTCTGGGCCTGGCTGAAAGGAGCAGCGGTTCCTaGACTGCTATTGGCGATGTACTCAACTCCAACATG +
Preference number: 6 (lower is better)
Translates to: RILGLAERSSGS*TAIGDVLNSNM
Trigger: CATGTTGGAGTTGAGTACATCGCCAATAGCAGTGCAGGAACCGCTGCTCCTTTCAGCCAGGCCCAGAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS GCA 72 bp TGCACTGCTATTGGCGATGTACTCAACTCCAACATGTaGCTTGGTGTGGAGACGATGTCTGTGAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: CTAIGDVLNSNM*LGVETMSVSLP
Trigger: AGGCAAGCTCACAGACATCGTCTCCACACCAAGGCACATGTTGGAGTTGAGTACATCGCCAATAGCAGTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS CCA 72 bp TGCTATTGGCGATGTACTCAACTCCAACATGTGCCTTaGTGTGGAGACGATGTCTGTGAGCTTGCCTGCATG +
Preference number: 6 (lower is better)
Translates to: CYWRCTQLQHVP*CGDDVCELACM
Trigger: CATGCAGGCAAGCTCACAGACATCGTCTCCACACCAAGGCACATGTTGGAGTTGAGTACATCGCCAATAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS GCA 72 bp GATGTTCAAAGCAAAGTCTGCACTTCCATTTGCAATTaGATCTTTCCGGGCCCAGATGCGTATCTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: DVQSKVCTSICN*IFPGPDAYLLA
Trigger: GGCAAGGAGATACGCATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACTTTGCTTTGAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS GCA 72 bp ACCTGTGATGTTCAAAGCAAAGTCTGCACTTCCATTTaGAATTGCATCTTTCCGGGCCCAGATGCGTATCTC +
Preference number: 6 (lower is better)
Translates to: TCDVQSKVCTSI*NCIFPGPDAYL
Trigger: GAGATACGCATCTGGGCCCGGAAAGATGCAATTGCAAATGGAAGTGCAGACTTTGCTTTGAACATCACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000504467.5
CDS CAA 72 bp ATGCCCATGAATGCTCTTTTACTCACAGCTTGCCAGTaGTTGACTAAGAAGTCTTTTGCGACATACCGGCCA +
Preference number: 6 (lower is better)
Translates to: MPMNALLLTACQ*LTKKSFATYRP
Trigger: TGGCCGGTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGAGCATTCATGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS CAA 90 bp AGACATATGCCCATGAATGCTCTTTTACTCACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAA +
Preference number: 6 (lower is better)
Translates to: RHMPMNALLLTACQL*TKKSFATYRPTSDE
Trigger: TTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGAGCATTCATGGGCATATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS TCA 72 bp AGACCAATTAGAGTATTCCATCTTCCCTGGACACAGTaGTTGGTACATCTGACCCAAGTAGGACCAATCAAA +
Preference number: 6 (lower is better)
Translates to: RPIRVFHLPWTQ*LVHLTQVGPIK
Trigger: TTTGATTGGTCCTACTTGGGTCAGATGTACCAATCACTGTGTCCAGGGAAGATGGAATACTCTAATTGGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515454.5
CDS GCA 72 bp AGACATATGCCCATGAATGCTCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAGTCTTTTGCGACATAC +
Preference number: 6 (lower is better)
Translates to: RHMPMNALLLTA*QLLTKKSFATY
Trigger: GTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGAGCATTCATGGGCATATGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503203.5
CDS GCA 72 bp ACTGAGAGTGCTGAGGATTATATAAGTGGGGAGCTATaGTTCTCTCCACAAGGAAAAAGACTGCCTAATAAA +
Preference number: 6 (lower is better)
Translates to: TESAEDYISGEL*FSPQGKRLPNK
Trigger: TTTATTAGGCAGTCTTTTTCCTTGTGGAGAGAAGCATAGCTCCCCACTTATATAATCCTCAGCACTCTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515454.5
CDS CAA 90 bp ATCAATGATTGTGTTCCATACCTTTTACTCACAGCTTGCCAGTTGTaGACTAAGAAGTCTTTTGCGACATACCGGCCAACTTCAGATGAA +
Preference number: 6 (lower is better)
Translates to: INDCVPYLLLTACQL*TKKSFATYRPTSDE
Trigger: TTCATCTGAAGTTGGCCGGTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGGTATGGAACACAATCATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000515454.5
CDS CAA 90 bp GAAGCACCTATTAGATTACCTGGCAAACTTCATCCCTTCCTGCTCTaGTCAACTTCAACAGGGGTTATTTTTGAAACAGAGATGATTTAT +
Preference number: 6 (lower is better)
Translates to: EAPIRLPGKLHPFLL*STSTGVIFETEMIY
Trigger: ATAAATCATCTCTGTTTCAAAAATAACCCCTGTTGAAGTTGACAAGAGCAGGAAGGGATGAAGTTTGCCAGGTAATCTAATAGGTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512413.1
CDS GCA 72 bp ATCAATGATTGTGTTCCATACCTTTTACTCACAGCTTaGCAGTTGTTGACTAAGAAGTCTTTTGCGACATAC +
Preference number: 6 (lower is better)
Translates to: INDCVPYLLLTA*QLLTKKSFATY
Trigger: GTATGTCGCAAAAGACTTCTTAGTCAACAACTGGCAAGCTGTGAGTAAAAGGTATGGAACACAATCATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000515454.5
CDS TCA 72 bp ATTCAAATTCAAAATCACCCAGTCATGGTCAGAATCTaGAACTTGCATTTCTGGGAATACTTTGCTGCTTTG +
Preference number: 6 (lower is better)
Translates to: IQIQNHPVMVRI*NLHFWEYFAAL
Trigger: CAAAGCAGCAAAGTATTCCCAGAAATGCAAGTTTCAGATTCTGACCATGACTGGGTGATTTTGAATTTGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357872.9
ENST00000395528.6
ENST00000503329.5
ENST00000504467.5
ENST00000512314.5
ENST00000514509.5