RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LUZP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000169641

Ensembl transcript IDs: ENST00000302291.8, ENST00000314174.5, ENST00000418342.5, ENST00000471849.5, ENST00000475164.2

Found 1037 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACAGCCCGGCTCTACCACAGTTTTCCAGCCAAGGCTTGTGTCTTaGCTGGTTAACTGGCCTTGGATCCTTCGTGGGGCAGGACGGTGG +
Preference number: 1 (lower is better)
Translates to: PQPGSTTVFQPRLVS*LVNWPWILRGAGRW
Trigger: CCACCGTCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAGAGCCGGGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp AGCCCGGCTCTACCACAGTTTTCCAGCCAAGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCCTTCGTGGGGCAGGACGGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: SPALPQFSSQGLCLA*LTGLGSFVGQDGGR
Trigger: TCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAGAGCCGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp GGACAGGGACAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAGCTTGTAGTCTCTGATTCCCTCTGG +
Preference number: 1 (lower is better)
Translates to: GQGQGEREDSCIGEG*AWVTVQLVVSDSLW
Trigger: CCAGAGGGAATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTGTCCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp GGTTGGGCCTGGGTGACTGTCCAGCTTGTAGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTACCTGAGCCACAGCCCGGCTCTACCA +
Preference number: 1 (lower is better)
Translates to: GWAWVTVQLVVSDSL*PNGKNYLSHSPALP
Trigger: TGGTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp GGACAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTAGTCTCTGATTCCCTCTGGCCAAAT +
Preference number: 1 (lower is better)
Translates to: GQGEREDSCIGEGWA*VTVQLVVSDSLWPN
Trigger: ATTTGGCCAGAGGGAATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 90 bp AGCTGGGGTTGGGGAGGGATGATGTCATTCCAATGGGTATCCGCATaGGTATCTGCATGCTCTGCTTCCAGGAGACTGGTAAGCCAGGAG +
Preference number: 1 (lower is better)
Translates to: SWGWGGMMSFQWVSA*VSACSASRRLVSQE
Trigger: CTCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAATGACATCATCCCTCCCCAACCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp TTGGGGAGGGATGATGTCATTCCAATGGGTATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAGACTGGTAAGCCAGGAGCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: LGRDDVIPMGIRMSI*MLCFQETGKPGARS
Trigger: TGACCTGGCTCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAATGACATCATCCCTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp CATGCCTCTCATGGAGCTATTGCTTGTGGAGTGACTAAAGGGGTCTaGTTTCCCTCTTGCTGGGCACTTCCTAGAAGGCAGAGGATGCTG +
Preference number: 1 (lower is better)
Translates to: HASHGAIACGVTKGV*FPSCWALPRRQRML
Trigger: CAGCATCCTCTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAGCTCCATGAGAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp GCTGGTACTAAGCCAGCTTCACTTCCTCCAACCAAGCAGCTCTATTaGCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACAC +
Preference number: 1 (lower is better)
Translates to: AGTKPASLPPTKQLY*QVPQLTRNPPTTIH
Trigger: GTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGTTGGAGGAAGTGAAGCTGGCTTAGTACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp GAGCCTCAGAGACCATCCCATCTAATCCCTTCACACTTTGCAGATTaGGAAACAGGCCCACGGAGCTTCTCTGAGCTCATCCCCATGAGA +
Preference number: 1 (lower is better)
Translates to: EPQRPSHLIPSHFAD*ETGPRSFSELIPMR
Trigger: TCTCATGGGGATGAGCTCAGAGAAGCTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGAAGGGATTAGATGGGATGGTCTCTGAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp GGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTaGTTTTCAGAAACATGCCTCCCAACTTTGGGATTTGAGAGCCAG +
Preference number: 1 (lower is better)
Translates to: GPLMMRPGSKQSHLS*FSETCLPTLGFESQ
Trigger: CTGGCTCTCAAATCCCAAAGTTGGGAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 90 bp GTAGTCTCACAGTCCATGCCTCTCATGGAGCTATTGCTTGTGGAGTaGCTAAAGGGGTCTGCTTTCCCTCTTGCTGGGCACTTCCTAGAA +
Preference number: 1 (lower is better)
Translates to: VVSQSMPLMELLLVE*LKGSAFPLAGHFLE
Trigger: TTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAGCTCCATGAGAGGCATGGACTGTGAGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 90 bp CCCCAAGCCTCCTCACTGCCAAATCTGATACAGACAAGGTCAGGATaGACACTGGTTCCCATGCTGAGTGAAGGCAGAGAAGACAAATTC +
Preference number: 1 (lower is better)
Translates to: PQASSLPNLIQTRSG*TLVPMLSEGREDKF
Trigger: GAATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGGAGGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp GTGAGGAGACTGAGAAACCAGAACATTAACCACACAGACAGAGGCTaGCCTAGGATCCAGAAACAACCCACCAAGGAGCCGAGAAGAATT +
Preference number: 1 (lower is better)
Translates to: VRRLRNQNINHTDRG*PRIQKQPTKEPRRI
Trigger: AATTCTTCTCGGCTCCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGTTCTGGTTTCTCAGTCTCCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp GATGATGTCATTCCAATGGGTATCCGCATGAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAGCCAGGAGCCAGGTCAAACTTCAAC +
Preference number: 1 (lower is better)
Translates to: DDVIPMGIRMSICML*FQETGKPGARSNFN
Trigger: GTTGAAGTTTGACCTGGCTCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAATGACATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 90 bp AAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTCTGACACCCTaGGCCTCACACTCACATAAGGCAGGTGGTTCTGGATTTATCAAA +
Preference number: 1 (lower is better)
Translates to: KKTLPGASPDAVLTP*ASHSHKAGGSGFIK
Trigger: TTTGATAAATCCAGAACCACCTGCCTTATGTGAGTGTGAGGCTCAGGGTGTCAGAACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR CCA 90 bp AACAGTCACACCTCAGTTGCTTTTCAGAAACATGCCTCCCAACTTTaGGATTTGAGAGCCAGCCTTGCCAGCCATTTGAAGCCCAGAGAA +
Preference number: 1 (lower is better)
Translates to: NSHTSVAFQKHASQL*DLRASLASHLKPRE
Trigger: TTCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp AACCAGCCCTGCCCTCAGACTGATAATATGAGACAGACAGCTGTCTaGGGGGCAAAAGAAAGTGTCACTTGGAATTGGGTATACGCTTAT +
Preference number: 1 (lower is better)
Translates to: NQPCPQTDNMRQTAV*GAKESVTWNWVYAY
Trigger: ATAAGCGTATACCCAATTCCAAGTGACACTTTCTTTTGCCCCCCAGACAGCTGTCTGTCTCATATTATCAGTCTGAGGGCAGGGCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR TCA 90 bp TCTGATACAGACAAGGTCAGGATGAACACTGGTTCCCATGCTGAGTaGAGGCAGAGAAGACAAATTCCTCTGGAGGAAGTCTTGAGTCTT +
Preference number: 1 (lower is better)
Translates to: SDTDKVRMNTGSHAE*RQRRQIPLEEVLSL
Trigger: AAGACTCAAGACTTCCTCCAGAGGAATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTGTATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp GCAGAGAAGACAAATTCCTCTGGAGGAAGTCTTGAGTCTTCCTCTTaGCAGGAAATTCATAGGAGATGCACAGGAACAGGAGATACACAG +
Preference number: 1 (lower is better)
Translates to: AEKTNSSGGSLESSS*QEIHRRCTGTGDTQ
Trigger: CTGTGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAGGAATTTGTCTTCTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp ATAGCACCAGAATCCAGGGCTCCAACACTCAAAGACAAGAATTATTaGCGAGATCTTTTTAGGCATGGCTTGGCGCCCTTCTGTTTCCAT +
Preference number: 1 (lower is better)
Translates to: IAPESRAPTLKDKNY*RDLFRHGLAPFCFH
Trigger: ATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAGATCTCGCCAATAATTCTTGTCTTTGAGTGTTGGAGCCCTGGATTCTGGTGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 90 bp TTCGAAAGTTCTGGAAGCTTAAAGTCTAAAATGGGTACACAGGGCTaGATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTTCATT +
Preference number: 1 (lower is better)
Translates to: FESSGSLKSKMGTQG*IHYRGSQSREDQFI
Trigger: AATGAACTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCATTTTAGACTTTAAGCTTCCAGAACTTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 90 bp CAGGAAATTCATAGGAGATGCACAGGAACAGGAGATACACAGACTTaGGTACTTTCCATAATACCTAGACTCCTAGAACGCCAGGAGATA +
Preference number: 1 (lower is better)
Translates to: QEIHRRCTGTGDTQT*VLSIIPRLLERQEI
Trigger: TATCTCCTGGCGTTCTAGGAGTCTAGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 90 bp TGTGACTGGTATAAGGAACCTAACCAATTTATTTACGTGGCTTTCTaGAAAGTTTGCTGCATTTTGAACTATATAAAGCTGAGGCCCTCA +
Preference number: 1 (lower is better)
Translates to: CDWYKEPNQFIYVAF*KVCCILNYIKLRPS
Trigger: TGAGGGCCTCAGCTTTATATAGTTCAAAATGCAGCAAACTTTTCAGAAAGCCACGTAAATAAATTGGTTAGGTTCCTTATACCAGTCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGGTCTCCCCTCTACTTaGAGGCTTCCTCCAGGACCC +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFGLPST*RLPPGP
Trigger: GGGTCCTGGAGGAAGCCTCCAAGTAGAGGGGAGACC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGCCTCCTTGGTCCCATaGTTGGAGCTGCTGCACCTA +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFASLVP*LELLHL
Trigger: TAGGTGCAGCAGCTCCAAGCATGGGACCAAGGAGGC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQGEGWA*VTVQLV
Trigger: TACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQCIGEG*AWVTVQ
Trigger: CTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGAGAGGACTCGTGCATTaGGGAAGGTTGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQRGLVH*GRLGLG
Trigger: ACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp TACCTGAGCCACAGCCCGGCTCTACCACAGTTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACTGGCCTTGGATCCTTCGTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: YLSHSPALPQFSSQG*CLAWLTGLGSFVGQ
Trigger: CTGCCCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAGAGCCGGGCTGTGGCTCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGGACGGTGGAAGAGCTaGGAAGCAGGAGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTGRWKS*EAGAEG
Trigger: GCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCTCTGGAGGAAGTCTTaGGTCTTCCTCTTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFLWRKS*VFLLPG
Trigger: TCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCCCAACTTTGGGATTTaGGAGCCAGCCTTGCCAGCC +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWPNFGI*EPALPA
Trigger: GGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCTGGTTAACTGGCCTTaGATCCTTCGTGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLVNWP*ILRGAG
Trigger: TCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGEGWA*VTVQLV
Trigger: TACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTGCTTTCCCTCTTGCTaGGCACTTCCTAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFCFPSC*ALPRRQ
Trigger: CTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCCAGGAGATACTGTGTaGCACTGGGCAAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQPGDTV*HWARLM
Trigger: CATCAGCCTTGCCCAGTGCCACACAGTATCTCCTGG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCTTGGTAAAGTGCGATaGCTCCTCCATGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWLGKVR*LLHGGW
Trigger: CCATCCCCCATGGAGGAGGCATCGCACTTTACCAAG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCATTTATGTGCAAGCTTaGCTACAGCTGAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFIYVQA*LQLRVG
Trigger: CCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAAT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGAAGGCAGAGGATGCTaGGTCAGGCCCAGCTTAGCC +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDEGRGC*VRPSLA
Trigger: GGCTAAGCTGGGCCTGACCCAGCATCCTCTGCCTTC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCAGCTGAGGGTGGGGTaGCATCCTTGGCCCCACTGC +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLQLRVG*HPWPHC
Trigger: GCAGTGGGGCCAAGGATGCCACCCCACCCTCAGCTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGGGTTGGGGAGGGATaGTGTCATTCCAATGGGTAT +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGVGEG*CHSNGY
Trigger: ATACCCATTGGAATGACATCATCCCTCCCCAACCCC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGACAATGAAGTCAGCTTaGAGTCTCCAGCCACTGGAG +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQTMKSA*SLQPLE
Trigger: CTCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGCTCCAAGAAGACAATaGCTCACCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQAPRRQ*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCATTGTCTTCTTGGAGC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGATGGCAGCCTTGAGTaGGCTAGTTTCTGGCCAGTA +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWDGSLE*ASFWPV
Trigger: TACTGGCCAGAAACTAGCTCACTCAAGGCTGCCATC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCATGATCCTATGGTTGTaGGGCTTTGAGGAGAACCCT +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFMILWL*GFEENP
Trigger: AGGGTTCTCCTCAAAGCCTCACAACCATAGGATCAT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTCGGGCCTCCTCCTGTTaGCCAGAGCTCCCCATCAGC +
Preference number: 2 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCRASSC*PELPIS
Trigger: GCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCCCG...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTCTTGCCTGGTTAACTaGCCTTGGATCCTTCGTGGG +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWSCLVN*PWILRG
Trigger: CCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDCIGEG*AWVTVQ
Trigger: CTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACAGAGGACTCGTGCATTaGGGAAGGTTGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDRGLVH*GRLGLG
Trigger: ACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCAATGGTCCAACTACTTaGTGGACAGGGACAAGGAGA +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFNGPTT*WTGTRR
Trigger: TCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTCAGAGGTGGGGATGTaGACAGGAAAGGCAGGCCAC +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSEVGM*TGKAGH
Trigger: GTGGCCTGCCTTTCCTGTCCACATCCCCACCTCTGA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGTGTGGGAAGGCTCGTaGCTCCTTCCTCCATCCTCA +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQVWEGS*LLPPSS
Trigger: TGAGGATGGAGGAAGGAGCCACGAGCCTTCCCACAC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp GGGACTTTATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTaGGTGGACAGGGACAAGGAGAGAGAGAGGACTCGTGCATTGGGG +
Preference number: 2 (lower is better)
Translates to: GTLSSLVWGPEWSNY*VDRDKERERTRALG
Trigger: CCCCAATGCACGAGTCCTCTCTCTCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCAAGAACCCACACGGATaGTACCTTCCACAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFKNPHG*YLPQAK
Trigger: TTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTGGGAAGCAGAAGTATaGGCAATAGATTCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQWEAEV*AIDSCP
Trigger: GGGACAGGAATCTATTGCTCATACTTCTGCTTCCCA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGAAATAGCATCTTaGGCATCAGAGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLEIAS*ASEVGM
Trigger: CATCCCCACCTCTGATGCTCAAGATGCTATTTCCAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGCCTTGCCAGCCATTTaGAGCCCAGAGAAACAGCCT +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTALPAI*SPEKQP
Trigger: AGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGCCTTGCCAGCCATTTaGAGCCCAGAGAAACAGCCT +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQALPAI*SPEKQP
Trigger: AGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTTCTTGTGCTTTTCATaGTGTTCTGAGGGCCTACGG +
Preference number: 2 (lower is better)
Translates to: IPERPAACEDLLTEAAENFLCFS*CSEGLR
Trigger: CCGTAGGCCCTCAGAACAGCATGAAAAGCACAAGAA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR GCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTGGCTCCCCCTCACTGTaGCCTACAGAAAGGGCACCG +
Preference number: 2 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCGSPSL*PTERAP
Trigger: CGGTGCCCTTTCTGTAGGGCACAGTGAGGGGGAGCC...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGAGAGAGAGGACTCGTaGATTGGGGAAGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTEREDS*IGEGWA
Trigger: GGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTATCTTCCCTTGTTTaGGGGCCAGAATGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLSSLV*GPEWSN
Trigger: GTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGATCTTATGGGGTACTTaGGCCCATTGGGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLILWGT*AHWANE
Trigger: CTCATTTGCCCAATGGGCTCAAGTACCCCATAAGAT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAGGAAAGGAGATGCATaGGGCTTGCACCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNRKGDA*GLHLQV
Trigger: CACCTGGAGGTGCAAGCCTCATGCATCTCCTTTCCT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTCTGGAGGAAGTCTTaGGTCTTCCTCTTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLWRKS*VFLLPG
Trigger: TCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCCTCACTGCCAAATCTaGTACAGACAAGGTCAGGAT +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLPHCQI*YRQGQD
Trigger: ATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTGGGAAGCAGAAGTATaGGCAATAGATTCCTGTCCC +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWWEAEV*AIDSCP
Trigger: GGGACAGGAATCTATTGCTCATACTTCTGCTTCCCA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTTGGAAATAGCATCTTaGGCATCAGAGGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLEIAS*ASEVGM
Trigger: CATCCCCACCTCTGATGCTCAAGATGCTATTTCCAA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCTAGAAGGCAGAGGATaGTGGGTCAGGCCCAGCTTA +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLEGRG*WVRPSL
Trigger: TAAGCTGGGCCTGACCCAGCATCCTCTGCCTTCTAG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTTTGAGAGCCAGCCTTaGCAGCCATTTGAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTFESQP*QPFEAQ
Trigger: CTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGCTTCTTTATCCACCTaGAGCTTTCTCTGGTTTAGT +
Preference number: 2 (lower is better)
Translates to: CTQGALSHCFALVSSDRFASLST*SFLWFS
Trigger: ACTAAACCAGAGAAAGCTGCAGGTGGATAAAGAAGC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGAGAACTTGCTGACCTaGCTCCCCCTCACTGTGCCC +
Preference number: 2 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAENLLT*LPLTVP
Trigger: GGGCACAGTGAGGGGGAGCCAGGTCAGCAAGTTCTC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTCTTGCCTGGTTAACTaGCCTTGGATCCTTCGTGGG +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTSCLVN*PWILRG
Trigger: CCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGTTTGGGGGCCAGAATaGTCCAACTACTTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTVWGPE*SNYLVD
Trigger: GTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAAC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCCTGATGATGAGGCCTaGGTCCAAACAGTCACACCT +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTPDDEA*VQTVTP
Trigger: AGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp TATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCATCCTaGGCCCCACTGCAGATCCCTTTAACCCACACTGTGACTCTTTCT +
Preference number: 2 (lower is better)
Translates to: YLCASLPTAEGGVAS*APLQIPLTHTVTLS
Trigger: AGAAAGAGTCACAGTGTGGGTTAAAGGGATCTGCAGTGGGGCCAAGGATGCCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGCTCCAAGAAGACAATaGCTCACCCAAGGTCACACA +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQAPRRQ*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCATTGTCTTCTTGGAGC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCAGACAAGGTCAGGATaGACACTGGTTCCCATGCTG +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNQTRSG*TLVPML
Trigger: CAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTTGACTCCTGCTGTGTaGTGGGGACTTTATCTTCCC +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDLTPAV*WGLYLP
Trigger: GGGAAGATAAAGTCCCCAGCACACAGCAGGAGTCAA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTTCCCTCTGGCCAAATaGCAAAAATTACCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWFPLAK*QKLPEP
Trigger: TGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTCACACTTTGCAGATTaGGAAACAGGCCCACGGAGC +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNSHFAD*ETGPRS
Trigger: GCTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCATGCCTCCCAACTTTaGGATTTGAGAGCCAGCCTT +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTHASQL*DLRASL
Trigger: AAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAAAAGCAGCAGCACGTaGAAGAGATCAGCTGCTGGT +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQKSSST*KRSAAG
Trigger: ACCAGCAGCTGATCTCTTCCACGTGCTGCTGCTTTT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp CACACCTCAGTTGCTTTTCAGAAACATGCCTCCCAACTTTGGGATTaGAGAGCCAGCCTTGCCAGCCATTTGAAGCCCAGAGAAACAGCC +
Preference number: 2 (lower is better)
Translates to: HTSVAFQKHASQLWD*RASLASHLKPRETA
Trigger: GGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATGTTTCTGAAAAGCAACTGAGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCATGGCAAAAATTACCTaGGCCACAGCCCGGCTCTAC +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLMAKIT*ATARLY
Trigger: GTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCAT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCATAAAGGTAGCCTTTaGAAGAGGATCCCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWHKGSL*KRIPSL
Trigger: CAAAGAAGGGATCCTCTTTCAAAGGCTACCTTTATG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGGTTCCCATGCTGAGTaGAGGCAGAGAAGACAAATT +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTGSHAE*RQRRQI
Trigger: AATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGACCACCACAGAGGTTaGTTTTCTTTGAACTCTCAA +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLDHHRG*FSLNSQ
Trigger: TTGAGAGTTCAAAGAAAATCAACCTCTGTGGTGGTC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAG +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSICML*FQETGK
Trigger: CTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNIRMSI*MLCFQE
Trigger: CTCCTGGAAGCAGAGCATGCAGATACTCATGCGGAT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAGAGAAAGCAGGCGATaGCAGCAGCATTACTGGTGC +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLRESRR*QQHYWC
Trigger: GCACCAGTAATGCTGCTGGCATCGCCTGCTTTCTCT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCATCAGCTTGGTAAAGTaGGATGCCTCCTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLISLVK*DASSMG
Trigger: CCCCATGGAGGAGGCATCGCACTTTACCAAGCTGAT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTTGAACTCTCAAGGTTaGCAACCAGTGAAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWLNSQG*QPVKEN
Trigger: ATTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGTAATGGAAAGAATCTaGACACCAGGATCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQVMERI*TPGSGQ
Trigger: CTGCCCTGATCCTGGTGTGCAGATTCTTTCCATTAC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACAATGGTCCAACTACTTaGTGGACAGGGACAAGGAGA +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDNGPTT*WTGTRR
Trigger: TCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp TGTACGTATCACCTTTCCTCCAGCGAAGTCATCATGATAGTCGACTaGCAGAAATCCGGGGCCCACTTCTGTAGGAATGCATCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: CTYHLSSSEVIMIVD*QKSGAHFCRNASAW
Trigger: CCAAGCTGATGCATTCCTACAGAAGTGGGCCCCGGATTTCTGCAAGTCGACTATCATGATGACTTCGCTGGAGGAAAGGTGATACGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp CATGCCTCCCAACTTTGGGATTTGAGAGCCAGCCTTGCCAGCCATTaGAAGCCCAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAA +
Preference number: 2 (lower is better)
Translates to: HASQLWDLRASLASH*KPRETASSLYLLLQ
Trigger: TTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp ATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTTCATTTCCTaGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGTGGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: IHYRGSQSREDQFIS*LFSASRCGKARGSF
Trigger: GAAGGAGCCACGAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCTATTGCTTGTGGAGTaGCTAAAGGGGTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLLLVE*LKGSAF
Trigger: GAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGATTTACGTGGCTTTCTaGAAAGTTTGCTGCATTTTG +
Preference number: 2 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQIYVAF*KVCCIL
Trigger: CAAAATGCAGCAAACTTTTCAGAAAGCCACGTAAAT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGAGAGGATCCCTTCTTTaGATTGACAGAATGCTAAAG +
Preference number: 2 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWRGSLL*IDRMLK
Trigger: CTTTAGCATTCTGTCAATTCAAAGAAGGGATCCTCT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTACAGACAGGGAAACTaGGGCTCCAAGAAGACAATG +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNYRQGN*GSKKTM
Trigger: CATTGTCTTCTTGGAGCCTCAGTTTCCCTGTCTGTA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCCTCACTGCCAAATCTaGTACAGACAAGGTCAGGAT +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNPHCQI*YRQGQD
Trigger: ATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTGACTCCTGCTGTGTaGTGGGGACTTTATCTTCCC +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLLTPAV*WGLYLP
Trigger: GGGAAGATAAAGTCCCCAGCACACAGCAGGAGTCAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTGCCAGCAGCATTACTaGTGCTCAGGAAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLCQQHY*CSGKEM
Trigger: CATCTCCTTTCCTGAGCACCAGTAATGCTGCTGGCA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp AAACAGTCACACCTCAGTTGCTTTTCAGAAACATGCCTCCCAACTTaGGGATTTGAGAGCCAGCCTTGCCAGCCATTTGAAGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: KQSHLSCFSETCLPT*GFESQPCQPFEAQR
Trigger: TCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGGACGGTGGAAGAGCTaGGAAGCAGGAGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPGRWKS*EAGAEG
Trigger: GCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACCATAAAGGTAGCCTTTaGAAGAGGATCCCTTCTTTG +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDHKGSL*KRIPSL
Trigger: CAAAGAAGGGATCCTCTTTCAAAGGCTACCTTTATG...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCAGGGAGGCTGCAAGTaGAGGATGGCAGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSQGGCK*RMAALS
Trigger: ACTCAAGGCTGCCATCCTTCACTTGCAGCCTCCCTG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGAGGTTGATTTTCTTTaGACTCTCAAGGTTGCCAAC +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTEVDFL*TLKVAN
Trigger: GTTGGCAACCTTGAGAGTTCAAAGAAAATCAACCTC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAG +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLSICML*FQETGK
Trigger: CTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGACAAGCAAATCCTATTaGACTCAGATTTCAAGATGG +
Preference number: 2 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLTSKSY*TQISRW
Trigger: CCATCTTGAAATCTGAGTGCAATAGGATTTGCTTGT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGCCTCCTTGGTCCCATaGTTGGAGCTGCTGCACCTA +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSASLVP*LELLHL
Trigger: TAGGTGCAGCAGCTCCAAGCATGGGACCAAGGAGGC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATTCCCTCTGGCCAAATaGCAAAAATTACCTGAGCCA +
Preference number: 2 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTFPLAK*QKLPEP
Trigger: TGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGAAGTCTCCAGCCACTaGAGAGAAAGCAGGCGATGC +
Preference number: 2 (lower is better)
Translates to: REEPTRMIPSTSKNHPILEVSSH*RESRRC
Trigger: GCATCGCCTGCTTTCTCTCCAGTGGCTGGAGACTTC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACTTCCCCATGTGACTaGTATAAGGAACCTAACCAA +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTSPCD*YKEPNQ
Trigger: TTGGTTAGGTTCCTTATACCAGTCACATGGGGAAGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACAATGCCTTTAGATTaGCAAAACTCTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTMPLD*QNSGKQ
Trigger: CTGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTAGGAAAGGAGATGCATaGGGCTTGCACCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSRKGDA*GLHLQV
Trigger: CACCTGGAGGTGCAAGCCTCATGCATCTCCTTTCCT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACAGAGGATCCCTTCTTTaGATTGACAGAATGCTAAAG +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDRGSLL*IDRMLK
Trigger: CTTTAGCATTCTGTCAATTCAAAGAAGGGATCCTCT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGGCACTGGGCAAGGCTaGTGCCACAAAGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMGTGQG*CHKEPQ
Trigger: CTGAGGCTCTTTGTGGCATCAGCCTTGCCCAGTGCC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAGATGTTGGTGCTGCTaGAATGTGGAAAGATCCAGA +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLRCWCC*NVERSR
Trigger: TCTGGATCTTTCCACATTTCAGCAGCACCAACATCT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTACCAAGGCTTGTGTCTTaGCTGGTTAACTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: REEPTRMIPSTSKNHPILPRLVS*LVNWPW
Trigger: CCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGG...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGCTTGCACCTCCAGGTaGCTTTGGAAGGTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSACTSR*LWKVSR
Trigger: TCTGCTCACCTTCCAAAGGCACCTGGAGGTGCAAGC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGTGACTAAAGGGGTCTaGTTTCCCTCTTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: REEPTRMIPSTSKNHPILVTKGV*FPSCWA
Trigger: TGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCAC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGAAATTCATAGGAGATaGACAGGAACAGGAGATACA +
Preference number: 2 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDEIHRR*TGTGDT
Trigger: TGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCTTGAGTCTTCCTCTTaGCAGGAAATTCATAGGAGA +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLESSS*QEIHRR
Trigger: TCTCCTATGAATTTCCTGGCAAGAGGAAGACTCAAG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTAC +
Preference number: 2 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTVSDSL*PNGKNY
Trigger: GTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGAC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGAAGGCAGAGGATGCTaGGTCAGGCCCAGCTTAGCC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPEGRGC*VRPSLA
Trigger: GGCTAAGCTGGGCCTGACCCAGCATCCTCTGCCTTC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACACTTCCCCATGTGACTaGTATAAGGAACCTAACCAA +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNTSPCD*YKEPNQ
Trigger: TTGGTTAGGTTCCTTATACCAGTCACATGGGGAAGT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACACAATGCCTTTAGATTaGCAAAACTCTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNTMPLD*QNSGKQ
Trigger: CTGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGATGGCAGCCTTGAGTaGGCTAGTTTCTGGCCAGTA +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSDGSLE*ASFWPV
Trigger: TACTGGCCAGAAACTAGCTCACTCAAGGCTGCCATC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCAGGGAGGCTGCAAGTaGAGGATGGCAGCCTTGAGT +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCQGGCK*RMAALS
Trigger: ACTCAAGGCTGCCATCCTTCACTTGCAGCCTCCCTG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGACCACCACAGAGGTTaGTTTTCTTTGAACTCTCAA +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLDHHRG*FSLNSQ
Trigger: TTGAGAGTTCAAAGAAAATCAACCTCTGTGGTGGTC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCCAAGGCTTGTGTCTTaGCTGGTTAACTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSPRLVS*LVNWPW
Trigger: CCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGAGAGAGAGGACTCGTaGATTGGGGAAGGTTGGGCC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPEREDS*IGEGWA
Trigger: GGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGTCTGCTTTCCCTCTTaGTGGGCACTTCCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSVCFPS*WALPRR
Trigger: CCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGAC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTACCAAGCAGCTCTATTaGCAGGTCCCCCAACTCACT +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSTKQLY*QVPQLT
Trigger: AGTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGCCTTGGATCCTTCGTaGGGCAGGACGGTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLALDPS*GRTVEE
Trigger: CTCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCC +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSGLCLA*LTGLGS
Trigger: GGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp ACACTCAAAGACAAGAATTATTGGCGAGATCTTTTTAGGCATGGCTaGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTTA +
Preference number: 2 (lower is better)
Translates to: TLKDKNYWRDLFRHG*APFCFHQQRRATDL
Trigger: TAAGTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAGATCTCGCCAATAATTCTTGTCTTTGAGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATGGGCAAATGAGGAGTaGAGTGGATATAGTGAGGAG +
Preference number: 2 (lower is better)
Translates to: REEPTRMIPSTSKNHPILWANEE*SGYSEE
Trigger: CTCCTCACTATATCCACTTCACTCCTCATTTGCCCA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCCCACGGAGCTTCTCTaGGCTCATCCCCATGAGATT +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCPTELL*AHPHEI
Trigger: AATCTCATGGGGATGAGCTCAGAGAAGCTCCGTGGG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSIRMSI*MLCFQE
Trigger: CTCCTGGAAGCAGAGCATGCAGATACTCATGCGGAT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGAGATGCATGAGGCTTaGACCTCCAGGTGCCTTTGG +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCEMHEA*TSRCLW
Trigger: CCAAAGGCACCTGGAGGTGCAAGCCTCATGCATCTC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCTTGGTAAAGTGCGATaGCTCCTCCATGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPLGKVR*LLHGGW
Trigger: CCATCCCCCATGGAGGAGGCATCGCACTTTACCAAG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTGCCAGCAGCATTACTaGTGCTCAGGAAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSCQQHY*CSGKEM
Trigger: CATCTCCTTTCCTGAGCACCAGTAATGCTGCTGGCA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCAGGAGATACTGTGTaGCACTGGGCAAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMPGDTV*HWARLM
Trigger: CATCAGCCTTGCCCAGTGCCACACAGTATCTCCTGG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTATGGCAAAAATTACCTaGGCCACAGCCCGGCTCTAC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPMAKIT*ATARLY
Trigger: GTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCAT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGGGGTTGGGGAGGGATaGTGTCATTCCAATGGGTAT +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPGVGEG*CHSNGY
Trigger: ATACCCATTGGAATGACATCATCCCTCCCCAACCCC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCATTTACGTGGCTTTCTaGAAAGTTTGCTGCATTTTG +
Preference number: 2 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLIYVAF*KVCCIL
Trigger: CAAAATGCAGCAAACTTTTCAGAAAGCCACGTAAAT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTCTGCTTTCCCTCTTaGTGGGCACTTCCTAGAAGG +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVCFPS*WALPRR
Trigger: CCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTATCAGCTTGGTAAAGTaGGATGCCTCCTCCATGGGG +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPISLVK*DASSMG
Trigger: CCCCATGGAGGAGGCATCGCACTTTACCAAGCTGAT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAAGACAGACAGCTGTCTaGGGGGCAAAAGAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPRQTAV*GAKESV
Trigger: GACACTTTCTTTTGCCCCCCAGACAGCTGTCTGTCT...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACTGGTTAACTGGCCTTaGATCCTTCGTGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLLVNWP*ILRGAG
Trigger: TCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGTTTGGGGGCCAGAATaGTCCAACTACTTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPVWGPE*SNYLVD
Trigger: GTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAAC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTGCTTTCCCTCTTGCTaGGCACTTCCTAGAAGGCAG +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCCFPSC*ALPRRQ
Trigger: CTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTAAGAACCCACACGGATaGTACCTTCCACAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSKNPHG*YLPQAK
Trigger: TTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCACACAGACAGAGGCTaGCCTAGGATCCAGAAACAA +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPHTDRG*PRIQKQ
Trigger: TTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGCACAGACCCCTTTCTaGTTTAAGTCTGAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: REEPTRMIPSTSKNHPILAQTPF*FKSEEK
Trigger: CTTTTCTTCAGACTTAAAGCAGAAAGGGGTCTGTGC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCAGTCACACCTCAGTTaGTTTTCAGAAACATGCCTC +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSQSHLS*FSETCL
Trigger: GAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCC +
Preference number: 2 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLGLCLA*LTGLGS
Trigger: GGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCACTCAGATTTCAAGATaGCAGCCCCAGCAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCTQISR*QPQQKG
Trigger: GCCCTTTTGCTGGGGCTGCCATCTTGAAATCTGAGT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 90 bp AGGATGTTCTGCCTCATCCCAGCATCCTTATCTGCAAAGTCCCTTTaGCCATATAAGATGATAAAAACATGTTACATGCTGGTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: RMFCLIPASLSAKSL*PYKMIKTCYMLVPS
Trigger: GGAAGGAACCAGCATGTAACATGTTTTTATCATCTTATATGGCAAAAGGGACTTTGCAGATAAGGATGCTGGGATGAGGCAGAACATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGATCTTATGGGGTACTTaGGCCCATTGGGCAAATGAG +
Preference number: 2 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMILWGT*AHWANE
Trigger: CTCATTTGCCCAATGGGCTCAAGTACCCCATAAGAT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCTATTGCTTGTGGAGTaGCTAAAGGGGTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPLLLVE*LKGSAF
Trigger: GAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTACAGACAGGGAAACTaGGGCTCCAAGAAGACAATG +
Preference number: 2 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPYRQGN*GSKKTM
Trigger: CATTGTCTTCTTGGAGCCTCAGTTTCCCTGTCTGTA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTAAAGGATACTACCTGTaGTTACATTTAAGGCCCACC +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSKGYYL*LHLRPT
Trigger: GGTGGGCCTTAAATGTAATCACAGGTAGTATCCTTT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTAGTGTCACTTGGAATTaGGTATACGCTTATCTAAAA +
Preference number: 2 (lower is better)
Translates to: HHHRFLIKKTLPGASPDASVTWN*VYAYLK
Trigger: TTTTAGATAAGCGTATACCCAATTCCAAGTGACACT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTAAAGAAAGTGTCACTTaGAATTGGGTATACGCTTAT +
Preference number: 2 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCKESVT*NWVYAY
Trigger: ATAAGCGTATACCCAATTCCAAGTGACACTTTCTTT...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTAC +
Preference number: 2 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSVSDSL*PNGKNY
Trigger: GTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGAC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACCAAGGTGGAAACAATaGAGTCAGCTTGAAGTCTCC +
Preference number: 2 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLPRWKQ*SQLEVS
Trigger: GGAGACTTCAAGCTGACTTCATTGTTTCCACCTTGG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTATTATCTTCCCTTGTTTaGGGGCCAGAATGGTCCAAC +
Preference number: 2 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLLSSLV*GPEWSN
Trigger: GTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAA...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGAAATTCATAGGAGATaGACAGGAACAGGAGATACA +
Preference number: 2 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMEIHRR*TGTGDT
Trigger: TGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGGAGATACACAGACTTaGGTACTTTCCATAATACCT +
Preference number: 2 (lower is better)
Translates to: RETASSLYLLLQCYFLQCGDTQT*VLSIIP
Trigger: AGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGACAAGCAAATCCTATTaGACTCAGATTTCAAGATGG +
Preference number: 2 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMTSKSY*TQISRW
Trigger: CCATCTTGAAATCTGAGTGCAATAGGATTTGCTTGT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCAACCAAGCAGCTCTATaGCCAGGTCCCCCAACTCAC +
Preference number: 3 (lower is better)
Translates to: CTQGALSHCFALVSSDRFNQAAL*PGPPTH
Trigger: GTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGTT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGAATGGTCCAACTACTaGGTGGACAGGGACAAGGAG +
Preference number: 3 (lower is better)
Translates to: CTQGALSHCFALVSSDRFEWSNY*VDRDKE
Trigger: CTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp GGCAGCTCCAATGATACACATGCACCCAAGGAGCCCTaGGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGT +
Preference number: 3 (lower is better)
Translates to: GSSNDTHAPKEP*ATALPWFPATG
Trigger: ACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCATGTGTATCATTGGAGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTGAGGCGGCCGAGAACTaGCTGACCTGGCTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCEAAEN*LTWLPL
Trigger: GAGGGGGAGCCAGGTCAGCAAGTTCTCGGCCGCCTC...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGAGCCTTGCCAGCCATTaGAAGCCCAGAGAAACAGCC +
Preference number: 3 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLSLASH*KPRETA
Trigger: GGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp GTTTTCCAGCCAAGGCTTGTGTCTTGCCTGGTTAACTaGCCTTGGATCCTTCGTGGGGCAGGACGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: VFQPRLVSCLVN*PWILRGAGRWK
Trigger: CTTCCACCGTCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp GAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTAGTCTCTGATTCCCTC +
Preference number: 3 (lower is better)
Translates to: EREDSCIGEGWA*VTVQLVVSDSL
Trigger: GAGGGAATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACT +
Preference number: 3 (lower is better)
Translates to: CTQGALSHCFALVSSDRFFSSQG*CLAWLT
Trigger: AGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGATCATGATAGTCGACTaGCAGAAATCCGGGGCCCAC +
Preference number: 3 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLIMIVD*QKSGAH
Trigger: GTGGGCCCCGGATTTCTGCAAGTCGACTATCATGAT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp CCAACCAGTGAAGGAGAATGGCAGGGAGGCTGCAAGTaGAGGATGGCAGCCTTGAGTGAGCTAGTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: PTSEGEWQGGCK*RMAALSELVSG
Trigger: GCCAGAAACTAGCTCACTCAAGGCTGCCATCCTTCACTTGCAGCCTCCCTGCCATTCTCCTTCACTGGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp GCTTGTGGAGTGACTAAAGGGGTCTGCTTTCCCTCTTaGTGGGCACTTCCTAGAAGGCAGAGGATGCTGGGT +
Preference number: 3 (lower is better)
Translates to: ACGVTKGVCFPS*WALPRRQRMLG
Trigger: ACCCAGCATCCTCTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp CTACCACAGTTTTCCAGCCAAGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCCTTCGTGGGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LPQFSSQGLCLA*LTGLGSFVGQD
Trigger: GTCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAGCTTGTAGTCTCTGAT +
Preference number: 3 (lower is better)
Translates to: QGEREDSCIGEG*AWVTVQLVVSD
Trigger: ATCAGAGACTACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp CAGTCCATGCCTCTCATGGAGCTATTGCTTGTGGAGTaGCTAAAGGGGTCTGCTTTCCCTCTTGCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: QSMPLMELLLVE*LKGSAFPLAGH
Trigger: GTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAGCTCCATGAGAGGCATGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp CATTACTGGTGCTCAGGAAAGGAGATGCATGAGGCTTaGACCTCCAGGTGCCTTTGGAAGGTGAGCAGAGAG +
Preference number: 3 (lower is better)
Translates to: HYWCSGKEMHEA*TSRCLWKVSRE
Trigger: CTCTCTGCTCACCTTCCAAAGGCACCTGGAGGTGCAAGCCTCATGCATCTCCTTTCCTGAGCACCAGTAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTTCACACTTTGCAGATaGGGAAACAGGCCCACGGAG +
Preference number: 3 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQFTLCR*GNRPTE
Trigger: CTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGAA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCTTGGAAATAGCATCTaGAGCATCAGAGGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWLGNSI*SIRGGD
Trigger: ATCCCCACCTCTGATGCTCAAGATGCTATTTCCAAG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp AACACTATAGTGCCCCCTGCATCCCGAACACTCCACTaGCGGGGGTTATTTATGTGCAAGCTTGCCTACAGC +
Preference number: 3 (lower is better)
Translates to: NTIVPPASRTLH*RGLFMCKLAYS
Trigger: GCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGGAGTGTTCGGGATGCAGGGGGCACTATAGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp CTGAGAAACCAGAACATTAACCACACAGACAGAGGCTaGCCTAGGATCCAGAAACAACCCACCAAGGAGCCG +
Preference number: 3 (lower is better)
Translates to: LRNQNINHTDRG*PRIQKQPTKEP
Trigger: CGGCTCCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGTTCTGGTTTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp ATTCCAATGGGTATCCGCATGAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAGCCAGGAGCCAGGTCA +
Preference number: 3 (lower is better)
Translates to: IPMGIRMSICML*FQETGKPGARS
Trigger: TGACCTGGCTCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp CATGGAGCTATTGCTTGTGGAGTGACTAAAGGGGTCTaGTTTCCCTCTTGCTGGGCACTTCCTAGAAGGCAG +
Preference number: 3 (lower is better)
Translates to: HGAIACGVTKGV*FPSCWALPRRQ
Trigger: CTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAGCTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp CCAGGACGACAAGTCCAAGAACACTATAGTGCCCCCTaGATCCCGAACACTCCACTGACGGGGGTTATTTAT +
Preference number: 3 (lower is better)
Translates to: PGRQVQEHYSAP*IPNTPLTGVIY
Trigger: ATAAATAACCCCCGTCAGTGGAGTGTTCGGGATGCAGGGGGCACTATAGTGTTCTTGGACTTGTCGTCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp TGGGTGACTGTCCAGCTTGTAGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTACCTGAGCCACAGCCCG +
Preference number: 3 (lower is better)
Translates to: WVTVQLVVSDSL*PNGKNYLSHSP
Trigger: CGGGCTGTGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGACTACAAGCTGGACAGTCACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp CTGGGGACTTTATCTTCCCTTGTTTGGGGGCCAGAATaGTCCAACTACTTGGTGGACAGGGACAAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LGTLSSLVWGPE*SNYLVDRDKER
Trigger: TCTCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCAGCCGAGAAGAATTTTaGACTCCTGCTGTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTSREEF*TPAVCW
Trigger: CCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACAGCCGAGAAGAATTTTaGACTCCTGCTGTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSREEF*TPAVCW
Trigger: CCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTTTGAACTCTCAAGGTaGCCAACCAGTGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLFELSR*PTSEGE
Trigger: TTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAAA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTTTTTAGGCATGGCTaGGCGCCCTTCTGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLFRHG*APFCFH
Trigger: ATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTTCAACAGGACATTTaGAGTAGCAGCAGATGTTGG +
Preference number: 3 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLQQDI*SSSRCW
Trigger: CCAACATCTGCTGCTACTCAAAATGTCCTGTTGAAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGACTTTATCTTCCCTaGTTTGGGGGCCAGAATGGT +
Preference number: 3 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGLYLP*FGGQNG
Trigger: ACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp TGGGGAGGGATGATGTCATTCCAATGGGTATCCGCATaGGTATCTGCATGCTCTGCTTCCAGGAGACTGGTA +
Preference number: 3 (lower is better)
Translates to: WGGMMSFQWVSA*VSACSASRRLV
Trigger: TACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAATGACATCATCCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp AGACCATCCCATCTAATCCCTTCACACTTTGCAGATTaGGAAACAGGCCCACGGAGCTTCTCTGAGCTCATC +
Preference number: 3 (lower is better)
Translates to: RPSHLIPSHFAD*ETGPRSFSELI
Trigger: GATGAGCTCAGAGAAGCTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGAAGGGATTAGATGGGATGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGACAATGCCTTTAGATaGGCAAAACTCTGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQDNAFR*AKLWEA
Trigger: TGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTTCAACAGGACATTTaGAGTAGCAGCAGATGTTGG +
Preference number: 3 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLQQDI*SSSRCW
Trigger: CCAACATCTGCTGCTACTCAAAATGTCCTGTTGAAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp CCAGAAACAACCCACCAAGGAGCCGAGAAGAATTTTTaGCTCCTGCTGTGTGCTGGGGACTTTATCTTCCCT +
Preference number: 3 (lower is better)
Translates to: PETTHQGAEKNF*LLLCAGDFIFP
Trigger: AGGGAAGATAAAGTCCCCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCTCCTTGGTGGGTTGTTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp AGGGATTTTCCCAAGGTGGAAACAATGAAGTCAGCTTaGAGTCTCCAGCCACTGGAGAGAAAGCAGGCGATG +
Preference number: 3 (lower is better)
Translates to: RDFPKVETMKSA*SLQPLERKQAM
Trigger: CATCGCCTGCTTTCTCTCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGTTTCCACCTTGGGAAAATCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp GACAAGGTCAGGATGAACACTGGTTCCCATGCTGAGTaGAGGCAGAGAAGACAAATTCCTCTGGAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: DKVRMNTGSHAE*RQRRQIPLEEV
Trigger: GACTTCCTCCAGAGGAATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACCAGTGTTCATCCTGACCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp GATGATGTCATTCCAATGGGTATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAGACTGGTAAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: DDVIPMGIRMSI*MLCFQETGKPG
Trigger: TCCTGGCTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACTCATGCGGATACCCATTGGAATGACATCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAACAATGAAGTCAGCTaGAAGTCTCCAGCCACTGGA +
Preference number: 3 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLNNEVS*KSPATG
Trigger: TCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGTT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGCCTCCAGCCTTTACTaGCTATTACAATGTTATTTT +
Preference number: 3 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLASSLY*LLQCYF
Trigger: AAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp TCCTCACTGCCAAATCTGATACAGACAAGGTCAGGATaGACACTGGTTCCCATGCTGAGTGAAGGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: SSLPNLIQTRSG*TLVPMLSEGRE
Trigger: TTCTCTGCCTTCACTCAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp GAATCCAGGGCTCCAACACTCAAAGACAAGAATTATTaGCGAGATCTTTTTAGGCATGGCTTGGCGCCCTTC +
Preference number: 3 (lower is better)
Translates to: ESRAPTLKDKNY*RDLFRHGLAPF
Trigger: GAAGGGCGCCAAGCCATGCCTAAAAAGATCTCGCCAATAATTCTTGTCTTTGAGTGTTGGAGCCCTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGAATGGTCCAACTACTaGGTGGACAGGGACAAGGAG +
Preference number: 3 (lower is better)
Translates to: REEPTRMIPSTSKNHPILEWSNY*VDRDKE
Trigger: CTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCACAGTCACACCTCAGTaGCTTTTCAGAAACATGCCT +
Preference number: 3 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLTVTPQ*LFRNMP
Trigger: AGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGCTTCCATCATCACATaGCCTTCTCCTGTAGTCAAA +
Preference number: 3 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLASIIT*PSPVVK
Trigger: TTTGACTACAGGAGAAGGCAATGTGATGATGGAAGC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGTGCATTGGGGAAGGTaGGGCCTGGGTGACTGTCCA +
Preference number: 3 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLVHWGR*GLGDCP
Trigger: TGGACAGTCACCCAGGCCCAACCTTCCCCAATGCAC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAGGAGATACACAGACTaGGGTACTTTCCATAATACC +
Preference number: 3 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLRRYTD*GTFHNT
Trigger: GGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp ATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTaGTTTTCAGAAACATGCCTCCCAACTTTGGGATTT +
Preference number: 3 (lower is better)
Translates to: MMRPGSKQSHLS*FSETCLPTLGF
Trigger: AAATCCCAAAGTTGGGAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp TCTGGAAGCTTAAAGTCTAAAATGGGTACACAGGGCTaGATTCATTACAGAGGCTCTCAGAGCAGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: SGSLKSKMGTQG*IHYRGSQSRED
Trigger: ATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCATTTTAGACTTTAAGCTTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp TGCCCTCAGACTGATAATATGAGACAGACAGCTGTCTaGGGGGCAAAAGAAAGTGTCACTTGGAATTGGGTA +
Preference number: 3 (lower is better)
Translates to: CPQTDNMRQTAV*GAKESVTWNWV
Trigger: TACCCAATTCCAAGTGACACTTTCTTTTGCCCCCCAGACAGCTGTCTGTCTCATATTATCAGTCTGAGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR CCA 72 bp ACAAGAATTATTGGCGAGATCTTTTTAGGCATGGCTTaGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: TRIIGEIFLGMA*RPSVSISREEP
Trigger: TGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAGATCTCGCCAATAATTCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACT +
Preference number: 3 (lower is better)
Translates to: REEPTRMIPSTSKNHPILFSSQG*CLAWLT
Trigger: AGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTTATCTTCCCTTGTTaGGGGGCCAGAATGGTCCAA +
Preference number: 3 (lower is better)
Translates to: REEPTRMIPSTSKNHPILFIFPC*GARMVQ
Trigger: TTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTATTTATGTGCAAGCTaGCCTACAGCTGAGGGTGGG +
Preference number: 3 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSYLCAS*PTAEGG
Trigger: CCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CCA 72 bp CATAGGAGATGCACAGGAACAGGAGATACACAGACTTaGGTACTTTCCATAATACCTAGACTCCTAGAACGC +
Preference number: 3 (lower is better)
Translates to: HRRCTGTGDTQT*VLSIIPRLLER
Trigger: GCGTTCTAGGAGTCTAGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCTGTTCCTGTGCATCTCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTTTATCTTCCCTTGTTaGGGGGCCAGAATGGTCCAA +
Preference number: 3 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSFIFPC*GARMVQ
Trigger: TTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp CTAGTCTTAGAATTCGTGGCAGTAATGGAAAGAATCTaGACACCAGGATCAGGGCAGTTAATGTTTCCAGTC +
Preference number: 3 (lower is better)
Translates to: LVLEFVAVMERI*TPGSGQLMFPV
Trigger: GACTGGAAACATTAACTGCCCTGATCCTGGTGTGCAGATTCTTTCCATTACTGCCACGAATTCTAAGACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTAAGTGTCACTTGGAATaGGGTATACGCTTATCTAAA +
Preference number: 3 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAKCHLE*GIRLSK
Trigger: TTTAGATAAGCGTATACCCAATTCCAAGTGACACTT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
3UTR-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTACAGTCACACCTCAGTaGCTTTTCAGAAACATGCCT +
Preference number: 3 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSTVTPQ*LFRNMP
Trigger: AGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp TCCATTTCAAAGAACTCATTTTACAGACAGGGAAACTaGGGCTCCAAGAAGACAATGACTCACCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: SISKNSFYRQGN*GSKKTMTHPRS
Trigger: TGACCTTGGGTGAGTCATTGTCTTCTTGGAGCCTCAGTTTCCCTGTCTGTAAAATGAGTTCTTTGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp AATATACTAGAGCTGCGCCAACGCATAGAAGACAGATaGTACACAGGGATGACATTGACAAAACTGGCATCA +
Preference number: 3 (lower is better)
Translates to: NILELRQRIEDR*YTGMTLTKLAS
Trigger: TGATGCCAGTTTTGTCAATGTCATCCCTGTGTATCATCTGTCTTCTATGCGTTGGCGCAGCTCTAGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR GCA 72 bp AAATATCCTGAAATAACTGTTACAAGCAAATCCTATTaGACTCAGATTTCAAGATGGCAGCCCCAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: KYPEITVTSKSY*TQISRWQPQQK
Trigger: CTTTTGCTGGGGCTGCCATCTTGAAATCTGAGTGCAATAGGATTTGCTTGTAACAGTTATTTCAGGATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR TCA 72 bp TTCATAAAGGTAGCCTTTGAAAGAGGATCCCTTCTTTaGATTGACAGAATGCTAAAGAAAAAGCACTGCCAA +
Preference number: 3 (lower is better)
Translates to: FIKVAFERGSLL*IDRMLKKKHCQ
Trigger: TTGGCAGTGCTTTTTCTTTAGCATTCTGTCAATTCAAAGAAGGGATCCTCTTTCAAAGGCTACCTTTATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGTTCCGCCGCTCAGCTaGCAGCGACCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQVPPLS*QRPAPP
Trigger: AGGAGGCGCCGGTCGCTGGCAGCTGAGCGGCGGAAC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGGCGCGTTCGCCGTTTaGCGCAGTGACAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVGAFAV*RSDSSA
Trigger: CGCGGAGCTGTCACTGCGGCAAACGGCGAACGCGCC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGTTCCGCCGCTCAGCTaGCAGCGACCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWVPPLS*QRPAPP
Trigger: AGGAGGCGCCGGTCGCTGGCAGCTGAGCGGCGGAAC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCGGGCCTCCTCCTGTTaGCCAGAGCTCCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENRASSC*PELPIS
Trigger: GCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCCCG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCAGCTGAGGGTGGGGTaGCATCCTTGGCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQQLRVG*HPWPHC
Trigger: GCAGTGGGGCCAAGGATGCCACCCCACCCTCAGCTG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTGGGGCGCTGGCGCTTaGCAGGACTCAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLWGAGA*QDSASL
Trigger: GAGAGAGGCTGAGTCCTGTCAAGCGCCAGCGCCCCA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTCTCTTGACCTCTaGGGCCCCGAACCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLSLDL*GPEPRS
Trigger: GGAGCGCGGTTCGGGGCCGCAGAGGTCAAGAGACAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAGCTTAAACCGCAAGTaGCGGCTGGAGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSLNRK*RLEAVS
Trigger: GGAGACGGCCTCCAGCCGCCACTTGCGGTTTAAGCT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGTGGGGTGGCATCCTTaGCCCCACTGCAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFVGWHP*PHCRSL
Trigger: AAGGGATCTGCAGTGGGGCCAAGGATGCCACCCCAC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGTAGCGACTCAGCACTaGGGGCTGCTCCCTAGACTT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLVATQH*GLLPRL
Trigger: AAGTCTAGGGAGCAGCCCTCAGTGCTGAGTCGCTAC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGACGGTGGAAGAGCTaGGAAGCAGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGRWKS*EAGAEG
Trigger: GCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGGCACTGGGCAAGGCTaGTGCCACAAAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVGTGQG*CHKEPQ
Trigger: CTGAGGCTCTTTGTGGCATCAGCCTTGCCCAGTGCC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTCAGTCCGCTCTCGGTaGCTGGCTTGGAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVSVRSR*LAWKSP
Trigger: AGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTCAGTCCGCTCTCGGTaGCTGGCTTGGAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQSVRSR*LAWKSP
Trigger: AGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTCCGCTCTCGGTGCCTaGCTTGGAAGTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQSALGA*LGSPLP
Trigger: TGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCCTCAGCACAGGGCCTaGTTGGCCGTAATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFPQHRA*LAVIVP
Trigger: AGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGAAGGCAGAGGATGCTaGGTCAGGCCCAGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQEGRGC*VRPSLA
Trigger: GGCTAAGCTGGGCCTGACCCAGCATCCTCTGCCTTC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp GCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCATCCTaGGCCCCACTGCAGATCCCTTTAACCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: ASLPTAEGGVAS*APLQIPLTHTV
Trigger: CACAGTGTGGGTTAAAGGGATCTGCAGTGGGGCCAAGGATGCCACCCCACCCTCAGCTGTAGGCAAGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCGTTCCCGCTTATGCTaGGGAGACAGTTCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLRSRLC*GDSSRA
Trigger: AGCGCGGGAACTGTCTCCTCAGCATAAGCGGGAACG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTCCAGGCTGCGACAGTaGTGGTGTCTCCTACCCGAT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQSRLRQ*WCLLPD
Trigger: ATCGGGTAGGAGACACCATCACTGTCGCAGCCTGGA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTCCAGGCTGCGACAGTaGTGGTGTCTCCTACCCGAT +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENSRLRQ*WCLLPD
Trigger: ATCGGGTAGGAGACACCATCACTGTCGCAGCCTGGA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGCGGGGCCAAATTGTaGCGTCAGCGTTCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGGAKL*RQRSGR
Trigger: CCTTCCAGAACGCTGACGTCACAATTTGGCCCCGCC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCAAGCTTGCCTACAGCTaGGGGTGGGGTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVKLAYS*GWGGIL
Trigger: AAGGATGCCACCCCACCCTCAGCTGTAGGCAAGCTT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCTTCAGGGGCCCATCTaGCATTCTCTCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENLQGPI*HSLRFC
Trigger: GCAGAAGCGGAGAGAATGGCAGATGGGCCCCTGAAG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCACCCTTCGAGTGCCCTaGTCAAAAAGGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFTLRVP*SKRQDL
Trigger: CAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGTCCTACCCTTCGAGTaGCCTGCTCAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLVLPFE*PAQKGR
Trigger: CCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGAC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGAGCTTAAACCGCAAGTaGCGGCTGGAGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWSLNRK*RLEAVS
Trigger: GGAGACGGCCTCCAGCCGCCACTTGCGGTTTAAGCT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCCCGCGCTGTGTGCTTaGACACAGAAGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFPALCA*TQKLHF
Trigger: GAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTCCGCTGGAGGTGCATaGCTATTCCTCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSAGGA*LFLSTG
Trigger: TCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTACTTTGGGTCCTTCTaGAGGAGGGCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLYFGSF*RRAQGH
Trigger: ATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGACCGGCGCCTCCTCTaGCTCCGCGGGACTGACAAT +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQDRRLL*LRGTDN
Trigger: ATTGTCAGTCCCGCGGAGCCAGAGGAGGCGCCGGTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCCAGGAGATACTGTGTaGCACTGGGCAAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFPGDTV*HWARLM
Trigger: CATCAGCCTTGCCCAGTGCCACACAGTATCTCCTGG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGTGTGGGAAGGCTCGTaGCTCCTTCCTCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQVWEGS*LLPPSS
Trigger: TGAGGATGGAGGAAGGAGCCACGAGCCTTCCCACAC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGTAGCGACTCAGCACTaGGGGCTGCTCCCTAGACTT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWVATQH*GLLPRL
Trigger: AAGTCTAGGGAGCAGCCCTCAGTGCTGAGTCGCTAC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGTAGCGACTCAGCACTaGGGGCTGCTCCCTAGACTT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLVATQH*GLLPRL
Trigger: AAGTCTAGGGAGCAGCCCTCAGTGCTGAGTCGCTAC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTATGGCTTTTCCACCTaGTTGTCTCCGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLYGFST*LSPLEV
Trigger: CACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTATGGCTTTTCCACCTaGTTGTCTCCGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFYGFST*LSPLEV
Trigger: CACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGGGCTGTTCGAGTTCTaGGAAGTCTGTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFGLFEF*EVCGRP
Trigger: AGGTCTTCCACAGACTTCTCAGAACTCGAACAGCCC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGGGCTGTTCGAGTTCTaGGAAGTCTGTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLGLFEF*EVCGRP
Trigger: AGGTCTTCCACAGACTTCTCAGAACTCGAACAGCCC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGCTGTTCTGACACCCTaGGCCTCACACTCACATAAG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLAVLTP*ASHSHK
Trigger: CTTATGTGAGTGTGAGGCTCAGGGTGTCAGAACAGC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTTCGGCCATGTCTACTaGCAGCCAATGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVFGHVY*QPMWAP
Trigger: AGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCTCAGCACTGAGGGCTaGTCCCTAGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLSTEG*SLDFFP
Trigger: AGGGAAGAAGTCTAGGGAGCAGCCCTCAGTGCTGAG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTTGCTAGTGGATGTGTaGCTCTCCCTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLLVDV*LSLRAS
Trigger: TGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTTGTCTCTTGACCTCTaGGGCCCCGAACCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDLSLDL*GPEPRS
Trigger: GGAGCGCGGTTCGGGGCCGCAGAGGTCAAGAGACAA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCCCCTTCTTCCTCCATaGTTGCTGAGTGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQPLLPP*LLSGSR
Trigger: CCTGGAACCACTCAGCAAGCATGGAGGAAGAAGGGG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACCGCAAGTGGCGGCTaGAGGCCGTCTCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTASGG*RPSPCS
Trigger: GCTACAAGGAGACGGCCTCCAGCCGCCACTTGCGGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTCTGCCAGCCCCACCTaGATATTGCTAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFSASPT*ILLVDV
Trigger: CACATCCACTAGCAATATCCAGGTGGGGCTGGCAGA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGAGAGGACTCGTGCATTaGGGAAGGTTGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLRGLVH*GRLGLG
Trigger: ACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTCAGAGGTGGGGATGTaGACAGGAAAGGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWSEVGM*TGKAGH
Trigger: GTGGCCTGCCTTTCCTGTCCACATCCCCACCTCTGA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTACGCCGTTTGCCGCAGTaGCAGCTCCGCGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILRRLPQ*QLRAAS
Trigger: GCTGGCGGCGCGGAGCTGTCACTGCGGCAAACGGCG...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCACAATGAAGTCAGCTTaGAGTCTCCAGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFTMKSA*SLQPLE
Trigger: CTCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGATGGCAGCCTTGAGTaGGCTAGTTTCTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVDGSLE*ASFWPV
Trigger: TACTGGCCAGAAACTAGCTCACTCAAGGCTGCCATC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGACAGGCAGCTCCAATaGTACACATGCACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVDRQLQ*YTCTQG
Trigger: TCCTTGGGTGCATGTGTATCATTGGAGCTGCCTGTC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTCAGCACTGAGGGCTaGTCCCTAGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLSTEG*SLDFFP
Trigger: AGGGAAGAAGTCTAGGGAGCAGCCCTCAGTGCTGAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCACCTCAAGGCTTCATaGGGACTGCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQHLKAS*GLLSSI
Trigger: GATGGAAGACAGCAGTCCGCATGAAGCCTTGAGGTG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGACCCTTCGAGTGCCCTaGTCAAAAAGGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWTLRVP*SKRQDL
Trigger: CAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCACACAGACAGAGGCTaGCCTAGGATCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFHTDRG*PRIQKQ
Trigger: TTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCACTATAGTGCCCCCTaGATCCCGAACACTCCACTG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWHYSAP*IPNTPL
Trigger: CAGTGGAGTGTTCGGGATGCAGGGGGCACTATAGTG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAGCTTAAACCGCAAGTaGCGGCTGGAGGCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSLNRK*RLEAVS
Trigger: GGAGACGGCCTCCAGCCGCCACTTGCGGTTTAAGCT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTACCCAATGGGTCACTaGGAACAGATCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENYPMGH*EQIHGW
Trigger: CCACCCATGGATCTGTTCCCAGTGACCCATTGGGTA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTACCCAATGGGTCACTaGGAACAGATCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVYPMGH*EQIHGW
Trigger: CCACCCATGGATCTGTTCCCAGTGACCCATTGGGTA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTCTGCCAGCCCCACCTaGATATTGCTAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENSASPT*ILLVDV
Trigger: CACATCCACTAGCAATATCCAGGTGGGGCTGGCAGA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTACTTTGGGTCCTTCTaGAGGAGGGCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWYFGSF*RRAQGH
Trigger: ATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGTTTGGGGGCCAGAATaGTCCAACTACTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQVWGPE*SNYLVD
Trigger: GTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAAC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGAAGTCTCCAGCCACTaGAGAGAAAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLEVSSH*RESRRC
Trigger: GCATCGCCTGCTTTCTCTCCAGTGGCTGGAGACTTC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGAAGGCAGAGGATGCTaGGTCAGGCCCAGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTEGRGC*VRPSLA
Trigger: GGCTAAGCTGGGCCTGACCCAGCATCCTCTGCCTTC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCATGCCTCCCAACTTTaGGATTTGAGAGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFHASQL*DLRASL
Trigger: AAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTCAGCCATTCGTTTCTaGAGCCGCTCAATCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSAIRF*SRSISD
Trigger: ATCTGAGATTGAGCGGCTTCAGAAACGAATGGCTGA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACACCACCCTTCCTTCTTaGTTCTTTGGACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENTTLPS*FFGRQC
Trigger: ACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGT...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCGTTCCCGCTTATGCTaGGGAGACAGTTCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRRSRLC*GDSSRA
Trigger: AGCGCGGGAACTGTCTCCTCAGCATAAGCGGGAACG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGAGGATCTTCGAGATaGGGCCAGGGCTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGGSSR*GQGSNG
Trigger: GCCATTGGAGCCCTGGCCTCATCTCGAAGATCCTCC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTCTCAGACTGATAATATaGGACAGACAGCTGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLLRLII*DRQLSG
Trigger: CCCAGACAGCTGTCTGTCTCATATTATCAGTCTGAG...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTGCGCCAGTGAGCCATaGATCCGGCTGCGGCACTTC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLCASEP*IRLRHF
Trigger: GAAGTGCCGCAGCCGGATTCATGGCTCACTGGCGCA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGTTGCCTGTAGACACTaGGTGTACAGTCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQVACRH*VYSLPL
Trigger: AAGGGGAAGACTGTACACTCAGTGTCTACAGGCAAC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGGACGGTGGAAGAGCTaGGAAGCAGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLGRWKS*EAGAEG
Trigger: GCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGATGGCAAAAATTACCTaGGCCACAGCCCGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLMAKIT*ATARLY
Trigger: GTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCAT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGGGGTTGGGGAGGGATaGTGTCATTCCAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWGVGEG*CHSNGY
Trigger: ATACCCATTGGAATGACATCATCCCTCCCCAACCCC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGCAGTGTGGAAGAGATaGCATCCTCAATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVAVWKR*HPQSVG
Trigger: ACCTACGGATTGAGGATGGCATCTCTTCCACACTGC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGTGAGAAGCTTTTGCTaGCCTCCTGTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLVRSFC*PPVGET
Trigger: AGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCAC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTCATGTGAGAAGCTTTTaGTGCCCTCCTGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLHVRSF*CPPVGE
Trigger: TTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATG...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGTCTTCCATCACAACTaGTGCAGGTTGATTAACCCC +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLVFHHN*CRLINP
Trigger: GGGGTTAATCAACCTGCAGCAGTTGTGATGGAAGAC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCGGCGGCTCTCCCTATaGTTGCTGTTTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWRRLSL*LLFWKQ
Trigger: CTGTTTCCAAAACAGCAAGCATAGGGAGAGCCGCCG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFSICML*FQETGK
Trigger: CTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGGAGCCCTGAGCCACTaGTTTGCCCTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNGALSH*FALVSS
Trigger: GCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCACCGCAAGTGGCGGCTaGAGGCCGTCTCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLTASGG*RPSPCS
Trigger: GCTACAAGGAGACGGCCTCCAGCCGCCACTTGCGGT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCATGTCTGCCTTTGCTaGACAGGAAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENHVCLC*TGKHLP
Trigger: GGGAAGATGCTTTCCTGTCCAGCAAAGGCAGACATG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTCTCGGTGCCTGGCTTaGAAGTCCCCTTCCACGCTT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTSRCLA*KSPSTL
Trigger: AAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAGCACCATTGGTATCTaGGAGCTCCATGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSTIGI*ELHGIG
Trigger: ACCAATACCATGGAGCTCCCAGATACCAATGGTGCT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTGTTTGGCCCTGGTTTaGAGACGGGTTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLCLALV*RRVSVS
Trigger: AGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACACTTGTCACTTTGTTTaGCCCTGGTTTGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENTCHFV*PWFGDG
Trigger: CCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGT...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCCTGATTGTCTCCGCTaGAGGTGCATGGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWPDCLR*RCMAIP
Trigger: AGGAATAGCCATGCACCTCCAGCGGAGACAATCAGG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTCTGAAGGGGCACTATaGCTTTTCCACCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSEGAL*LFHLIV
Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTCTGAAGGGGCACTATaGCTTTTCCACCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFSEGAL*LFHLIV
Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCAAAAAGGCAGGACCTaGGCTGTTCGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENQKGRT*AVRVLR
Trigger: TCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCAAAAAGGCAGGACCTaGGCTGTTCGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVQKGRT*AVRVLR
Trigger: TCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCCTCAGCACAGGGCCTaGTTGGCCGTAATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTPQHRA*LAVIVP
Trigger: AGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGATACTGTGTGGCACTaGGCAAGGCTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWDTVWH*ARLMPQ
Trigger: TTGTGGCATCAGCCTTGCCCAGTGCCACACAGTATC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGACTCAGATTTCAAGATaGCAGCCCCAGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQTQISR*QPQQKG
Trigger: GCCCTTTTGCTGGGGCTGCCATCTTGAAATCTGAGT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGTCTCCCCTCTACTTaGAGGCTTCCTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGLPST*RLPPGP
Trigger: GGGTCCTGGAGGAAGCCTCCAAGTAGAGGGGAGACC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGTGTGGGAAGGCTCGTaGCTCCTTCCTCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDVWEGS*LLPPSS
Trigger: TGAGGATGGAGGAAGGAGCCACGAGCCTTCCCACAC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp CACAGCCCGGCTCTACCACAGTTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACTGGCCTTGGATCCTTC +
Preference number: 4 (lower is better)
Translates to: HSPALPQFSSQG*CLAWLTGLGSF
Trigger: GAAGGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAACTGTGGTAGAGCCGGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGATTTCAGCTCCCGGGTaGGGTTTTCTTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQISAPG*GFLPLQ
Trigger: TTGAAGAGGAAGAAAACCTCACCCGGGAGCTGAAAT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGTGATGTCATGTTTGTaGATGGAGAGCTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLVMSCL*MESSKG
Trigger: CCCTTTTGAGCTCTCCATTCACAAACATGACATCAC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCTCAGGGGCATCCCCTaGACTTGGTCCTACCCTTCG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLLRGIP*TWSYPS
Trigger: CGAAGGGTAGGACCAAGTTCAGGGGATGCCCCTGAG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACCGGCCGAGAACTTGCTaGCCTGGCTCCCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDRPRTC*PGSPSL
Trigger: CAGTGAGGGGGAGCCAGGTCAGCAAGTTCTCGGCCG...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGCTCCAAGAAGACAATaGCTCACCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLAPRRQ*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCATTGTCTTCTTGGAGC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCCCACGGAGCTTCTCTaGGCTCATCCCCATGAGATT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTPTELL*AHPHEI
Trigger: AATCTCATGGGGATGAGCTCAGAGAAGCTCCGTGGG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAAGCTTGCCTACAGCTaGGGGTGGGGTGGCATCCTT +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNKLAYS*GWGGIL
Trigger: AAGGATGCCACCCCACCCTCAGCTGTAGGCAAGCTT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCAATCTCCGCCAACATaGTGGAGTTGCTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLQSPPT*WSCYLL
Trigger: CAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCACGACACAGATCCTCTaGTCTCTTAATTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFTTQIL*SLNFLV
Trigger: GACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCGT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTCTGACGCTAAACTCTaGTCAGTTTTATCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVSDAKL*SVLSRR
Trigger: CCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGCACGTGTCCCCTCTTaGCAAAGACAGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQARVPS*QRQSQR
Trigger: CCTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAGAACAGCCAGAGTTTaGAGCCTGAGTTACTTGACT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLRTARV*SLSYLT
Trigger: AGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACTTCAGGGGCCCATCTaGCATTCTCTCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLQGPI*HSLRFC
Trigger: GCAGAAGCGGAGAGAATGGCAGATGGGCCCCTGAAG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCTTCAGGGGCCCATCTaGCATTCTCTCCGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRLQGPI*HSLRFC
Trigger: GCAGAAGCGGAGAGAATGGCAGATGGGCCCCTGAAG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTGTCTCCGCTGGAGGTaGATGGCTATTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDCLRWR*MAIPLH
Trigger: GTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGTCCTACCCTTCGAGTaGCCTGCTCAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDVLPFE*PAQKGR
Trigger: CCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGAC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCCCCTTCTTCCTCCATaGTTGCTGAGTGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQPLLPP*LLSGSR
Trigger: CCTGGAACCACTCAGCAAGCATGGAGGAAGAAGGGG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTTGACTCCTGCTGTGTaGTGGGGACTTTATCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWLTPAV*WGLYLP
Trigger: GGGAAGATAAAGTCCCCAGCACACAGCAGGAGTCAA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGAGATGCATGAGGCTTaGACCTCCAGGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDEMHEA*TSRCLW
Trigger: CCAAAGGCACCTGGAGGTGCAAGCCTCATGCATCTC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTAGAAGGCAGAGGATaGTGGGTCAGGCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLEGRG*WVRPSL
Trigger: TAAGCTGGGCCTGACCCAGCATCCTCTGCCTTCTAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGCCTCCTTGGTCCCATaGTTGGAGCTGCTGCACCTA +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRASLVP*LELLHL
Trigger: TAGGTGCAGCAGCTCCAAGCATGGGACCAAGGAGGC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGGAGCCCTGAGCCACTaGTTTGCCCTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLGALSH*FALVSS
Trigger: GCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTACCGCAAGTGGCGGCTaGAGGCCGTCTCCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCTASGG*RPSPCS
Trigger: GCTACAAGGAGACGGCCTCCAGCCGCCACTTGCGGT...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCATGTCTGCCTTTGCTaGACAGGAAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWHVCLC*TGKHLP
Trigger: GGGAAGATGCTTTCCTGTCCAGCAAAGGCAGACATG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATCTCGGTGCCTGGCTTaGAAGTCCCCTTCCACGCTT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTSRCLA*KSPSTL
Trigger: AAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCTGGGAACAGATCCATaGGTGGTGTCACTAAACGTT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLGTDP*VVSLNV
Trigger: AACGTTTAGTGACACCACCCATGGATCTGTTCCCAG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTTTGGGCTCTGGCTCTaGAGTGATGGTTGTATTTAC +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLFGLWL*SDGCIY
Trigger: GTAAATACAACCATCACTCCAGAGCCAGAGCCCAAA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCACTTTGTTTGGCCCTaGTTTGGAGACGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWHFVWP*FGDGFL
Trigger: CAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTGTCATGTTTGTGAATaGAGAGCTCAAAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLCHVCE*RAQKGS
Trigger: GCTCCCCTTTTGAGCTCTCCATTCACAAACATGACA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCTCCACAGGATCCGATaGCTTGATTATAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFLHRIR*LDYNAA
Trigger: AGCAGCATTATAATCAAGCCATCGGATCCTGTGGAG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTCCGCTGGAGGTGCATaGCTATTCCTCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSAGGA*LFLSTG
Trigger: TCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGACAGTGAGGCTACTTTaGGTCCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQTVRLL*VLLEEG
Trigger: GCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNGEGWA*VTVQLV
Trigger: TACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCAATGGTCCAACTACTTaGTGGACAGGGACAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVNGPTT*WTGTRR
Trigger: TCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTGCCAGCAGCATTACTaGTGCTCAGGAAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLCQQHY*CSGKEM
Trigger: CATCTCCTTTCCTGAGCACCAGTAATGCTGCTGGCA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTGCCCTCCTGTTGGTaGAACTGGGAGAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLPSCW*NWEKKP
Trigger: AGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGAGGTTGAAAATCCCTaGAGGATGTTCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQEVENP*RMFSWL
Trigger: AAGCCAAGAGAACATCCTTCAGGGATTTTCAACCTC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACGAGGTTGAAAATCCCTaGAGGATGTTCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENEVENP*RMFSWL
Trigger: AAGCCAAGAGAACATCCTTCAGGGATTTTCAACCTC...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGCTCTGGCTCTGGAGTaGTGGTTGTATTTACCAACT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWALALE*WLYLPT
Trigger: AGTTGGTAAATACAACCATCACTCCAGAGCCAGAGC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTATTGGTGGAGGCTCTaGCAGATTTCACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFYWWRL*QISQIH
Trigger: ATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGACATGGTTGCTAACTaGTGTGAGCTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRDMVAN*CELCQP
Trigger: GGGCTGGCAGAGCTCACATCAGTTAGCAACCATGTC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGGGCTGTTCGAGTTCTaGGAAGTCTGTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTGLFEF*EVCGRP
Trigger: AGGTCTTCCACAGACTTCTCAGAACTCGAACAGCCC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCTCAGGGGCATCCCCTaGACTTGGTCCTACCCTTCG +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDALRGIP*TWSYPS
Trigger: CGAAGGGTAGGACCAAGTTCAGGGGATGCCCCTGAG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACACGGGTAAGCACCTCTaGCACAGTGAGGCTACTTTG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDTGKHL*HSEATL
Trigger: CAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCATGGCAAAAATTACCTaGGCCACAGCCCGGCTCTAC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTMAKIT*ATARLY
Trigger: GTAGAGCCGGGCTGTGGCTCAGGTAATTTTTGCCAT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTGGGCAAATGAGGAGTaGAGTGGATATAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWWANEE*SGYSEE
Trigger: CTCCTCACTATATCCACTTCACTCCTCATTTGCCCA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAAGGAAAGGAGATGCATaGGGCTTGCACCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTRKGDA*GLHLQV
Trigger: CACCTGGAGGTGCAAGCCTCATGCATCTCCTTTCCT...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTATTGCTTGTGGAGTaGCTAAAGGGGTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLLLVE*LKGSAF
Trigger: GAAAGCAGACCCCTTTAGTCACTCCACAAGCAATAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCAGGGAGGCTGCAAGTaGAGGATGGCAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLQGGCK*RMAALS
Trigger: ACTCAAGGCTGCCATCCTTCACTTGCAGCCTCCCTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGATGATCCTATGGTTGTaGGGCTTTGAGGAGAACCCT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLMILWL*GFEENP
Trigger: AGGGTTCTCCTCAAAGCCTCACAACCATAGGATCAT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTCTGACGCTAAACTCTaGTCAGTTTTATCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLSDAKL*SVLSRR
Trigger: CCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTCTCATGTCTGCCTTTaGTGGACAGGAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENSHVCL*WTGKHL
Trigger: AAGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGTGAGAAGCTTTTGCTaGCCTCCTGTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLVRSFC*PPVGET
Trigger: AGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCAC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTTGCTAGTGGATGTGTaGCTCTCCCTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLLVDV*LSLRAS
Trigger: TGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGTCCTACCCTTCGAGTaGCCTGCTCAAAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNVLPFE*PAQKGR
Trigger: CCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGAC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGGCTCCCCCTCACTGTaGCCTACAGAAAGGGCACCG +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDGSPSL*PTERAP
Trigger: CGGTGCCCTTTCTGTAGGGCACAGTGAGGGGGAGCC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGAGAGAGAGGACTCGTaGATTGGGGAAGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLEREDS*IGEGWA
Trigger: GGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAGAGAAAGCAGGCGATaGCAGCAGCATTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQRESRR*QQHYWC
Trigger: GCACCAGTAATGCTGCTGGCATCGCCTGCTTTCTCT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCTAGAAGGCAGAGGATaGTGGGTCAGGCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRLEGRG*WVRPSL
Trigger: TAAGCTGGGCCTGACCCAGCATCCTCTGCCTTCTAG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGTCTGCTTTCCCTCTTaGTGGGCACTTCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDVCFPS*WALPRR
Trigger: CCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGAC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGTCTGCTTTCCCTCTTaGTGGGCACTTCCTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTVCFPS*WALPRR
Trigger: CCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCAGAC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGTAATGGAAAGAATCTaGACACCAGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLVMERI*TPGSGQ
Trigger: CTGCCCTGATCCTGGTGTGCAGATTCTTTCCATTAC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGTAATGGAAAGAATCTaGACACCAGGATCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWVMERI*TPGSGQ
Trigger: CTGCCCTGATCCTGGTGTGCAGATTCTTTCCATTAC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCAAGGGGATGAGAAATaGTTACCTTTCTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFQGDEK*LPFSWQ
Trigger: TTGCCAAGAGAAAGGTAACCATTTCTCATCCCCTTG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTCTCCGCCAACATGCTaGAGTTGCTACCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSPPTC*SCYLLP
Trigger: AGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACCCGCGCTGTGTGCTTaGACACAGAAGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTPALCA*TQKLHF
Trigger: GAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTTCTTCCCTTCGCTCTaGGAGGAGCCGGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNFFPSL*EEPGTN
Trigger: GTTTGTACCCGGCTCCTCCCAGAGCGAAGGGAAGAA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTGGGAACAGATCCATaGGTGGTGTCACTAAACGTT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLGTDP*VVSLNV
Trigger: AACGTTTAGTGACACCACCCATGGATCTGTTCCCAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTATAGAACAGGAGCCTTaGAATTCGGGCAACTGTTAT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLIEQEP*NSGNCY
Trigger: ATAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTAT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACCTGTGGTTTGGGCTCTaGCTCTGGAGTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDLWFGL*LWSDGC
Trigger: ACAACCATCACTCCAGAGCCAGAGCCCAAACCACAG...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGAGCACCATTGGTATCTaGGAGCTCCATGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLSTIGI*ELHGIG
Trigger: ACCAATACCATGGAGCTCCCAGATACCAATGGTGCT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGGGCTAAAGGGCCTTTaGCTTTTTACCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTGLKGL*LFTPAP
Trigger: TGGTGCTGGGGTAAAAAGCCAAAGGCCCTTTAGCCC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGAAAGGGGAGCTGACATaGTTGCTAACTGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWKGELT*LLTDVS
Trigger: GCTCACATCAGTTAGCAACCATGTCAGCTCCCCTTT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTGTCATGTTTGTGAATaGAGAGCTCAAAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQCHVCE*RAQKGS
Trigger: GCTCCCCTTTTGAGCTCTCCATTCACAAACATGACA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCTCCACAGGATCCGATaGCTTGATTATAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: IPERPAACEDLLTEAAENLHRIR*LDYNAA
Trigger: AGCAGCATTATAATCAAGCCATCGGATCCTGTGGAG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACACAGTGAGGCTACTTTaGGTCCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNTVRLL*VLLEEG
Trigger: GCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTTCATGAAATACTCATaGGCCGACTGCACCAGGCTT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWFMKYS*ADCTRL
Trigger: AAGCCTGGTGCAGTCGGCCCATGAGTATTTCATGAA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGAATGGTCCAACTACTTaGTGGACAGGGACAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLNGPTT*WTGTRR
Trigger: TCTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTCACACTTTGCAGATTaGGAAACAGGCCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSHFAD*ETGPRS
Trigger: GCTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTCAGAGGTGGGGATGTaGACAGGAAAGGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLSEVGM*TGKAGH
Trigger: GTGGCCTGCCTTTCCTGTCCACATCCCCACCTCTGA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTTGCTACCTTCTGCCTaGATCACCTTGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLLPSA*ITLSWR
Trigger: TCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACTGCCCTCCTGTTGGTaGAACTGGGAGAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLPSCW*NWEKKP
Trigger: AGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGGAGGATCTTCGAGATaGGGCCAGGGCTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDGGSSR*GQGSNG
Trigger: GCCATTGGAGCCCTGGCCTCATCTCGAAGATCCTCC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTATTGGTGGAGGCTCTaGCAGATTTCACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQYWWRL*QISQIH
Trigger: ATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATATGGCTTTTCCACCTaGTTGTCTCCGCTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTYGFST*LSPLEV
Trigger: CACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCAGAGGATCCCTTCTTTaGATTGACAGAATGCTAAAG +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFRGSLL*IDRMLK
Trigger: CTTTAGCATTCTGTCAATTCAAAGAAGGGATCCTCT...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCATAAAGGTAGCCTTTaGAAGAGGATCCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVHKGSL*KRIPSL
Trigger: CAAAGAAGGGATCCTCTTTCAAAGGCTACCTTTATG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCTCTGGAGGAAGTCTTaGGTCTTCCTCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLWRKS*VFLLPG
Trigger: TCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGACAGGCAGCTCCAATaGTACACATGCACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTDRQLQ*YTCTQG
Trigger: TCCTTGGGTGCATGTGTATCATTGGAGCTGCCTGTC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCGCATAGAAGACAGATaGTACACAGGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWRIEDR*YTGMTL
Trigger: CAATGTCATCCCTGTGTATCATCTGTCTTCTATGCG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACACCATCATCAATCTCTaGGGCCCCGAACCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDTIINL*GPEPRS
Trigger: GGAGCGCGGTTCGGGGCCGCAGAGATTGATGATGGT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTCGGCCATGTCTACTaGCAGCCAATGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLFGHVY*QPMWAP
Trigger: AGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGGAGTTGCTACCTTCTaGCTGAATCACCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQGVATF*LNHLVL
Trigger: CAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAGTTCCCGCGCTGTGTaGTTGGACACAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNSSRAV*LDTEAS
Trigger: TGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTCAGTCCGCTCTCGGTaGCTGGCTTGGAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDSVRSR*LAWKSP
Trigger: AGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGCACGTGTCCCCTCTTaGCAAAGACAGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLARVPS*QRQSQR
Trigger: CCTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGAGCAGCTCTGGGGCTaGTGCTGTCAGATGGATATA +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPREQLWG*CCQMDI
Trigger: TATATCCATCTGACAGCAGCAGCCCCAGAGCTGCTC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTGTCTCCGCTGGAGGTaGATGGCTATTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLCLRWR*MAIPLH
Trigger: GTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCCAAGGCTTGTGTCTTaGCTGGTTAACTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRPRLVS*LVNWPW
Trigger: CCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCCAAGGCTTGTGTCTTaGCTGGTTAACTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNPRLVS*LVNWPW
Trigger: CCAAGGCCAGTTAACCAGGCAAGACACAAGCCTTGG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDIRMSI*MLCFQE
Trigger: CTCCTGGAAGCAGAGCATGCAGATACTCATGCGGAT...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGTGACTAAAGGGGTCTaGTTTCCCTCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRVTKGV*FPSCWA
Trigger: TGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCAC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCTTGAGTCTTCCTCTTaGCAGGAAATTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLESSS*QEIHRR
Trigger: TCTCCTATGAATTTCCTGGCAAGAGGAAGACTCAAG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTTGAACTCTCAAGGTTaGCAACCAGTGAAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLNSQG*QPVKEN
Trigger: ATTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGCTTCTTTATCCACCTaGAGCTTTCTCTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVASLST*SFLWFS
Trigger: ACTAAACCAGAGAAAGCTGCAGGTGGATAAAGAAGC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGATTTATGTGCAAGCTTaGCTACAGCTGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQIYVQA*LQLRVG
Trigger: CCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAAT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCACTATAGTGCCCCCTaGATCCCGAACACTCCACTG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLHYSAP*IPNTPL
Trigger: CAGTGGAGTGTTCGGGATGCAGGGGGCACTATAGTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTGGTTACCTTTCTCTTaGCAACCACAATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLWLPFS*QPQSSL
Trigger: CAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTCTCGGTGCCTGGCTTaGAAGTCCCCTTCCACGCTT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDASRCLA*KSPSTL
Trigger: AAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCACTTTGTTTGGCCCTaGTTTGGAGACGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTHFVWP*FGDGFL
Trigger: CAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACTTGTCACTTTGTTTaGCCCTGGTTTGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTCHFV*PWFGDG
Trigger: CCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGCTGCTGCTGTCAGATaGATATATAGTAATGCTACT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLAAAVR*IYSNAT
Trigger: AGTAGCATTACTATATATCCATCTGACAGCAGCAGC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATCTGCCAGCCCCACCTaGATATTGCTAGTGGATGTG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTSASPT*ILLVDV
Trigger: CACATCCACTAGCAATATCCAGGTGGGGCTGGCAGA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCCAGGAGATACTGTGTaGCACTGGGCAAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLPGDTV*HWARLM
Trigger: CATCAGCCTTGCCCAGTGCCACACAGTATCTCCTGG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCAAAAGCAGCAGCACGTaGAAGAGATCAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTKSSST*KRSAAG
Trigger: ACCAGCAGCTGATCTCTTCCACGTGCTGCTGCTTTT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGGCTTAGGTAACAGCTaGTTTAACAGATTGCCACAA +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVGLGNS*FNRLPQ
Trigger: TTGTGGCAATCTGTTAAACCAGCTGTTACCTAAGCC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGATTTCAGCTCCCGGGTaGGGTTTTCTTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQISAPG*GFLPLQ
Trigger: TTGAAGAGGAAGAAAACCTCACCCGGGAGCTGAAAT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTCAGCCATTCGTTTCTaGAGCCGCTCAATCTCAGAT +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSAIRF*SRSISD
Trigger: ATCTGAGATTGAGCGGCTTCAGAAACGAATGGCTGA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGGAGGATCTTCGAGATaGGGCCAGGGCTCCAATGGC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILGGSSR*GQGSNG
Trigger: GCCATTGGAGCCCTGGCCTCATCTCGAAGATCCTCC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGACATGGTTGCTAACTaGTGTGAGCTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDADMVAN*CELCQP
Trigger: GGGCTGGCAGAGCTCACATCAGTTAGCAACCATGTC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCCCCTCCTGCGCCAGTaGGCCATGAATCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCPLLRQ*AMNPAA
Trigger: CGCAGCCGGATTCATGGCTCACTGGCGCAGGAGGGG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCAGAGGATCCCTTCTTTaGATTGACAGAATGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVRGSLL*IDRMLK
Trigger: CTTTAGCATTCTGTCAATTCAAAGAAGGGATCCTCT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGCTCCAAGAAGACAATaGCTCACCCAAGGTCACACA +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRAPRRQ*LTQGHT
Trigger: TGTGTGACCTTGGGTGAGTCATTGTCTTCTTGGAGC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGGCACTGGGCAAGGCTaGTGCCACAAAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILGTGQG*CHKEPQ
Trigger: CTGAGGCTCTTTGTGGCATCAGCCTTGCCCAGTGCC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACGGTTCCCATGCTGAGTaGAGGCAGAGAAGACAAATT +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDGSHAE*RQRRQI
Trigger: AATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACC...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCAGACAAGGTCAGGATaGACACTGGTTCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLQTRSG*TLVPML
Trigger: CAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCCCTCACTGCCAAATCTaGTACAGACAAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTPHCQI*YRQGQD
Trigger: ATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGG...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTGGGAAGCAGAAGTATaGGCAATAGATTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQWEAEV*AIDSCP
Trigger: GGGACAGGAATCTATTGCTCATACTTCTGCTTCCCA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTTGGAAATAGCATCTTaGGCATCAGAGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDLEIAS*ASEVGM
Trigger: CATCCCCACCTCTGATGCTCAAGATGCTATTTCCAA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGTAGCACTTGGCACTaGCCCACTAAATATAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGSTWH*PTKYKE
Trigger: TTCTTTATATTTAGTGGGTCAGTGCCAAGTGCTACC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTATATATTGGTGATCTaGCTGGAAGATGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: CTQGALSHCFALVSSDRFYILVI*LEDENG
Trigger: TCCGTTTTCATCTTCCAGTCAGATCACCAATATATA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGTCTGCCTTTATTCCTaGTTCCCTCCATGGGTATGT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTVCLYS*FPPWVC
Trigger: ACATACCCATGGAGGGAATCAGGAATAAAGGCAGAC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAAGAAACCTGCCTGTTaGTCAGAGAATAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLKKPAC*SENSFH
Trigger: ATGAAAACTATTCTCTGAGCAACAGGCAGGTTTCTT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGTGAGAAGCTTTTGCTaGCCTCCTGTTGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTVRSFC*PPVGET
Trigger: AGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCAC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCTCAGCACTGAGGGCTaGTCCCTAGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDALSTEG*SLDFFP
Trigger: AGGGAAGAAGTCTAGGGAGCAGCCCTCAGTGCTGAG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATTACTTGACTTCCGTTaGCAAGCACGTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLLDFR*QARVPS
Trigger: AGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTACCCTTCGAGTGCCCTaGTCAAAAAGGCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDATLRVP*SKRQDL
Trigger: CAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCCACCAAGTTTTTATTaGCTCCGTAGCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRPPSFY*LRSWVL
Trigger: CAGGACCCAGCTACGGAGGCAATAAAAACTTGGTGG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGGCTCTCCCTATGCTTaGTGTTTTGGAAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQGSPYA*CFGNSH
Trigger: GTGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGCACAGACCCCTTTCTaGTTTAAGTCTGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLAQTPF*FKSEEK
Trigger: CTTTTCTTCAGACTTAAAGCAGAAAGGGGTCTGTGC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCAGAGGAGATTTTCTTaGTCAGATTTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQQRRFS*SDFSPH
Trigger: ATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACTTTGGACGGCAGTGTaGAAGAGATGCCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLWTAV*KRCHPQ
Trigger: TTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCTTTGGACGGCAGTGTaGAAGAGATGCCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLWTAV*KRCHPQ
Trigger: TTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTACCCAATGGGTCACTaGGAACAGATCCATGGGTGG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLYPMGH*EQIHGW
Trigger: CCACCCATGGATCTGTTCCCAGTGACCCATTGGGTA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGACTTGTCACTTTGTTTaGCCCTGGTTTGGAGACGGG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRTCHFV*PWFGDG
Trigger: CCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCAAAGGGGAGCTGACATaGTTGCTAACTGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTKGELT*LLTDVS
Trigger: GCTCACATCAGTTAGCAACCATGTCAGCTCCCCTTT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTCTGAAGGGGCACTATaGCTTTTCCACCTGATTGTC +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSEGAL*LFHLIV
Trigger: GACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGTTCTGAGAAGTCTGTaGAAGACCTCTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNVLRSL*KTSGCR
Trigger: CCTACACCCAGAGGTCTTCCACAGACTTCTCAGAAC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGTTCTGAGAAGTCTGTaGAAGACCTCTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTVLRSL*KTSGCR
Trigger: CCTACACCCAGAGGTCTTCCACAGACTTCTCAGAAC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCAAAAAGGCAGGACCTaGGCTGTTCGAGTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNQKGRT*AVRVLR
Trigger: TCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTACAGTGAGGCTACTTTaGGTCCTTCTGGAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDATVRLL*VLLEEG
Trigger: GCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTCTCATGCTTGCTGAGTaGTTCCAGGCTGCGACAGTG +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCLMLAE*FQAATV
Trigger: CACTGTCGCAGCCTGGAACCACTCAGCAAGCATGAG...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCATCTTCTTTGACAGCTaGAGACCATCATCAATCATG +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVIFFDS*RPSSIM
Trigger: CATGATTGATGATGGTCTCCAGCTGTCAAAGAAGAT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGCCTTGGATCCTTCGTaGGGCAGGACGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILALDPS*GRTVEE
Trigger: CTCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLGLCLA*LTGLGS
Trigger: GGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGATACTGTGTGGCACTaGGCAAGGCTGATGCCACAA +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLDTVWH*ARLMPQ
Trigger: TTGTGGCATCAGCCTTGCCCAGTGCCACACAGTATC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGACAATGCCTTTAGATTaGCAAAACTCTGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLTMPLD*QNSGKQ
Trigger: CTGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAAAAAGCAGCAGCACGTaGAAGAGATCAGCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTKSSST*KRSAAG
Trigger: ACCAGCAGCTGATCTCTTCCACGTGCTGCTGCTTTT...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAAACATGTTACATGCTaGTTCCTTCCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNKHVTC*FLPRGS
Trigger: GGAGCCCCTGGGAAGGAACCAGCATGTAACATGTTT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGGGCTTAGGTAACAGCTaGTTTAACAGATTGCCACAA +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWGLGNS*FNRLPQ
Trigger: TTGTGGCAATCTGTTAAACCAGCTGTTACCTAAGCC...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp CACCTTTCCTCCAGCGAAGTCATCATGATAGTCGACTaGCAGAAATCCGGGGCCCACTTCTGTAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: HLSSSEVIMIVD*QKSGAHFCRNA
Trigger: TGCATTCCTACAGAAGTGGGCCCCGGATTTCTGCAAGTCGACTATCATGATGACTTCGCTGGAGGAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp CAACTTTGGGATTTGAGAGCCAGCCTTGCCAGCCATTaGAAGCCCAGAGAAACAGCCTCCAGCCTTTACTTG +
Preference number: 4 (lower is better)
Translates to: QLWDLRASLASH*KPRETASSLYL
Trigger: CAAGTAAAGGCTGGAGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp AGAGGCTCTCAGAGCAGGGAGGATCAGTTCATTTCCTaGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGT +
Preference number: 4 (lower is better)
Translates to: RGSQSREDQFIS*LFSASRCGKAR
Trigger: ACGAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCCTGCTCTGAGAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCAACCACAATCTTCTTTaGCAGCTGGAGACCATCATC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTNHNLL*QLETII
Trigger: GATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTGCTACCTTCTGCCTaGATCACCTTGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLLLPSA*ITLSWR
Trigger: TCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACATTCTTACTCCTGCTaGAGGCCTCTTCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTHSYSC*RPLLAS
Trigger: AGAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGCTCTGGCTCTGGAGTaGTGGTTGTATTTACCAACT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRALALE*WLYLPT
Trigger: AGTTGGTAAATACAACCATCACTCCAGAGCCAGAGC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTACGGGTAAGCACCTCTaGCACAGTGAGGCTACTTTG +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDATGKHL*HSEATL
Trigger: CAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATCCAGGCTGCGACAGTaGTGGTGTCTCCTACCCGAT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILSRLRQ*WCLLPD
Trigger: ATCGGGTAGGAGACACCATCACTGTCGCAGCCTGGA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGTGGGCAAATGAGGAGTaGAGTGGATATAGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRWANEE*SGYSEE
Trigger: CTCCTCACTATATCCACTTCACTCCTCATTTGCCCA...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAATCTTATGGGGTACTTaGGCCCATTGGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTILWGT*AHWANE
Trigger: CTCATTTGCCCAATGGGCTCAAGTACCCCATAAGAT...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATACAGACAGGGAAACTaGGGCTCCAAGAAGACAATG +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTYRQGN*GSKKTM
Trigger: CATTGTCTTCTTGGAGCCTCAGTTTCCCTGTCTGTA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCAAGAACCCACACGGATaGTACCTTCCACAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTKNPHG*YLPQAK
Trigger: TTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGGTTCCCATGCTGAGTaGAGGCAGAGAAGACAAATT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTGSHAE*RQRRQI
Trigger: AATTTGTCTTCTCTGCCTTCACTCAGCATGGGAACC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTATATATTGGTGATCTaGCTGGAAGATGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQYILVI*LEDENG
Trigger: TCCGTTTTCATCTTCCAGTCAGATCACCAATATATA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCGCAGTGTGGAAGAGATaGCATCCTCAATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLAVWKR*HPQSVG
Trigger: ACCTACGGATTGAGGATGGCATCTCTTCCACACTGC...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGAAGAAACCTGCCTGTTaGTCAGAGAATAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQKKPAC*SENSFH
Trigger: ATGAAAACTATTCTCTGAGCAACAGGCAGGTTTCTT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCATGTGAGAAGCTTTTaGTGCCCTCCTGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNHVRSF*CPPVGE
Trigger: TTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGCACGTGTCCCCTCTTaGCAAAGACAGTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDARVPS*QRQSQR
Trigger: CCTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTTCCATCACAACTGCTaGAGGTTGATTAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTFHHNC*RLINPF
Trigger: GAAGGGGTTAATCAACCTGCAGCAGTTGTGATGGAA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGTTCCATCACAACTGCTaGAGGTTGATTAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQFHHNC*RLINPF
Trigger: GAAGGGGTTAATCAACCTGCAGCAGTTGTGATGGAA...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGAGCAGCTCTGGGGCTaGTGCTGTCAGATGGATATA +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAEQLWG*CCQMDI
Trigger: TATATCCATCTGACAGCAGCAGCCCCAGAGCTGCTC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCATTCTCTCCGCTTCTaGAAGCTGCAGGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAHSLRF*KLQGDV
Trigger: GACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTGTCTCCGCTGGAGGTaGATGGCTATTCCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDCLRWR*MAIPLH
Trigger: GTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTACTCATGGGCCGACTaGACCAGGCTTGCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCYSWAD*TRLAGG
Trigger: GCCGCCCGCAAGCCTGGTGCAGTCGGCCCATGAGTA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR GCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGGCTCTCCCTATGCTTaGTGTTTTGGAAACAGTCAC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNGSPYA*CFGNSH
Trigger: GTGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGAGAGAGAGGACTCGTaGATTGGGGAAGGTTGGGCC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILEREDS*IGEGWA
Trigger: GGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAGTATCTGCATGCTCTaGTTCCAGGAGACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRSICML*FQETGK
Trigger: CTTACCAGTCTCCTGGAAGCAGAGCATGCAGATACT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCATCAGTTCATTTCCTTaGTCTTTTCAGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVISSFP*SFQLLG
Trigger: ACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGAT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTGGTTACCTTTCTCTTaGCAACCACAATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLWLPFS*QPQSSL
Trigger: CAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAGTTTCTCAATCTCTTaGTTAAGGTCTTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSFSIS*LRSLTL
Trigger: CAAAGTCAAAGACCTTAACCAAGAGATTGAGAAACT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGAAGCTTCACTTCCGTaGCCTCTAAACTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPREASLP*PLNLVL
Trigger: GAGGACTAAGTTTAGAGGCCACGGAAGTGAAGCTTC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCTGTGGTTTGGGCTCTaGCTCTGGAGTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDALWFGL*LWSDGC
Trigger: ACAACCATCACTCCAGAGCCAGAGCCCAAACCACAG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAAGCACCATTGGTATCTaGGAGCTCCATGGTATTGGT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTSTIGI*ELHGIG
Trigger: ACCAATACCATGGAGCTCCCAGATACCAATGGTGCT...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGGGCTAAAGGGCCTTTaGCTTTTTACCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAGLKGL*LFTPAP
Trigger: TGGTGCTGGGGTAAAAAGCCAAAGGCCCTTTAGCCC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTCCTGATTGTCTCCGCTaGAGGTGCATGGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCPDCLR*RCMAIP
Trigger: AGGAATAGCCATGCACCTCCAGCGGAGACAATCAGG...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTAGTGTCACTTGGAATTaGGTATACGCTTATCTAAAA +
Preference number: 4 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSVTWN*VYAYLK
Trigger: TTTTAGATAAGCGTATACCCAATTCCAAGTGACACT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTTCCCTCTGGCCAAATaGCAAAAATTACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTFPLAK*QKLPEP
Trigger: TGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATTATCTTCCCTTGTTTaGGGGCCAGAATGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLSSLV*GPEWSN
Trigger: GTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGAGATACACAGACTTaGGTACTTTCCATAATACCT +
Preference number: 4 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGDTQT*VLSIIP
Trigger: AGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATTTTTAGGCATGGCTTaGCGCCCTTCTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTFLGMA*RPSVSI
Trigger: GATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCATGCCTCCCAACTTTaGGATTTGAGAGCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLHASQL*DLRASL
Trigger: AAGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGGTCTCCCCTCTACTTaGAGGCTTCCTCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSGLPST*RLPPGP
Trigger: GGGTCCTGGAGGAAGCCTCCAAGTAGAGGGGAGACC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp TCCAGAAACAACCCACCAAGGAGCCGAGAAGAATTTTaGACTCCTGCTGTGTGCTGGGGACTTTATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SRNNPPRSREEF*TPAVCWGLYLP
Trigger: GGGAAGATAAAGTCCCCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCTCCTTGGTGGGTTGTTTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACGTTCCCGCTTATGCTaGGGAGACAGTTCCCGCGCT +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPRSRLC*GDSSRA
Trigger: AGCGCGGGAACTGTCTCCTCAGCATAAGCGGGAACG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGAGGTTGAAAATCCCTaGAGGATGTTCTCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPREVENP*RMFSWL
Trigger: AAGCCAAGAGAACATCCTTCAGGGATTTTCAACCTC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACAACTGCTGCAGGTTaGTTAACCCCTTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTTAAG*LTPSLC
Trigger: ACATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGTGATGTCATGTTTGTaGATGGAGAGCTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRVMSCL*MESSKG
Trigger: CCCTTTTGAGCTCTCCATTCACAAACATGACATCAC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCATCTTATGGGGTACTTaGGCCCATTGGGCAAATGAG +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLILWGT*AHWANE
Trigger: CTCATTTGCCCAATGGGCTCAAGTACCCCATAAGAT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGAGGTTGATTTTCTTTaGACTCTCAAGGTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQEVDFL*TLKVAN
Trigger: GTTGGCAACCTTGAGAGTTCAAAGAAAATCAACCTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGACCACCACAGAGGTTaGTTTTCTTTGAACTCTCAA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQDHHRG*FSLNSQ
Trigger: TTGAGAGTTCAAAGAAAATCAACCTCTGTGGTGGTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGCCTTGCCAGCCATTTaGAGCCCAGAGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILALPAI*SPEKQP
Trigger: AGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGGTAGCACTTGGCACTaGCCCACTAAATATAAAGAA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQGSTWH*PTKYKE
Trigger: TTCTTTATATTTAGTGGGTCAGTGCCAAGTGCTACC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACATCTCATGTCTGCCTTTaGTGGACAGGAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTSHVCL*WTGKHL
Trigger: AAGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGA...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGAAGAAACCTGCCTGTTaGTCAGAGAATAGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWKKPAC*SENSFH
Trigger: ATGAAAACTATTCTCTGAGCAACAGGCAGGTTTCTT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTTACTTGACTTCCGTTaGCAAGCACGTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCLLDFR*QARVPS
Trigger: AGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAA...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAGAACAGCCAGAGTTTaGAGCCTGAGTTACTTGACT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRRTARV*SLSYLT
Trigger: AGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACCACCTCAAGGCTTCATaGGGACTGCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDHLKAS*GLLSSI
Trigger: GATGGAAGACAGCAGTCCGCATGAAGCCTTGAGGTG...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTACTTGGTAAAGTGCGATaGCTCCTCCATGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILLGKVR*LLHGGW
Trigger: CCATCCCCCATGGAGGAGGCATCGCACTTTACCAAG...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACCTTGAGTCTTCCTCTTaGCAGGAAATTCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDLESSS*QEIHRR
Trigger: TCTCCTATGAATTTCCTGGCAAGAGGAAGACTCAAG...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACAGTCACACCTCAGTTaGTTTTCAGAAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTQSHLS*FSETCL
Trigger: GAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCAGTCACACCTCAGTTaGTTTTCAGAAACATGCCTC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRQSHLS*FSETCL
Trigger: GAGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTACTGCCAGCCAATGTaGGCTCCTAGAGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDYCQPM*APRGIQ
Trigger: TTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTCTCCGCCAACATGCTaGAGTTGCTACCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDSPPTC*SCYLLP
Trigger: AGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCTTTGGACGGCAGTGTaGAAGAGATGCCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDALWTAV*KRCHPQ
Trigger: TTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTCCTTCTTGATTCTTTaGACGGCAGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNSFLIL*TAVWKR
Trigger: TCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATCCGCTCTCGGTGCCTaGCTTGGAAGTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPSALGA*LGSPLP
Trigger: TGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGTCAGCTCTACCCAATaGGTCACTGGGAACAGATCC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDVSSTQ*VTGNRS
Trigger: GGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGAC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGTTTGGGCTCTGGCTCTaGAGTGATGGTTGTATTTAC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRFGLWL*SDGCIY
Trigger: GTAAATACAACCATCACTCCAGAGCCAGAGCCCAAA...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTCACTTTGTTTGGCCCTaGTTTGGAGACGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAHFVWP*FGDGFL
Trigger: CAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTG...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGTGTCATGTTTGTGAATaGAGAGCTCAAAAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRCHVCE*RAQKGS
Trigger: GCTCCCCTTTTGAGCTCTCCATTCACAAACATGACA...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATCCGCTGGAGGTGCATaGCTATTCCTCTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILSAGGA*LFLSTG
Trigger: TCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTCTGAGAAGTCTGTaGAAGACCTCTGGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAVLRSL*KTSGCR
Trigger: CCTACACCCAGAGGTCTTCCACAGACTTCTCAGAAC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATACTTTGGGTCCTTCTaGAGGAGGGCTCAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILYFGSF*RRAQGH
Trigger: ATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGCCACTGCTTTGCCCTaGTTTCCAGCGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILATALP*FPATGS
Trigger: AGAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp GACAAGAATTATTGGCGAGATCTTTTTAGGCATGGCTaGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: DKNYWRDLFRHG*APFCFHQQRRA
Trigger: GGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAGATCTCGCCAATAATTCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTCATTCTTACTCCTGCTaGAGGCCTCTTCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCHSYSC*RPLLAS
Trigger: AGAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATG...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGCTCTGGCTCTGGAGTaGTGGTTGTATTTACCAACT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAALALE*WLYLPT
Trigger: AGTTGGTAAATACAACCATCACTCCAGAGCCAGAGC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCTCAGGGGCATCCCCTaGACTTGGTCCTACCCTTCG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCLRGIP*TWSYPS
Trigger: CGAAGGGTAGGACCAAGTTCAGGGGATGCCCCTGAG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGCACCTCTGACACAGTaGGGCTACTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSAPLTQ*GYFGSF
Trigger: GAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGACCACCACAGAGGTTaGTTTTCTTTGAACTCTCAA +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTDHHRG*FSLNSQ
Trigger: TTGAGAGTTCAAAGAAAATCAACCTCTGTGGTGGTC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGCAGTGTGGAAGAGATaGCATCCTCAATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDAVWKR*HPQSVG
Trigger: ACCTACGGATTGAGGATGGCATCTCTTCCACACTGC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTCTCATGTCTGCCTTTaGTGGACAGGAAAGCATCTT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLSHVCL*WTGKHL
Trigger: AAGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAATCAGCTTGGTAAAGTaGGATGCCTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILISLVK*DASSMG
Trigger: CCCCATGGAGGAGGCATCGCACTTTACCAAGCTGAT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGAAATTCATAGGAGATaGACAGGAACAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQEIHRR*TGTGDT
Trigger: TGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGCCTCCAGCCTTTACTTaGTATTACAATGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWPPAFT*YYNVIF
Trigger: GAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGG...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGCTTCTTTATCCACCTaGAGCTTTCTCTGGTTTAGT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRASLST*SFLWFS
Trigger: ACTAAACCAGAGAAAGCTGCAGGTGGATAAAGAAGC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCCGCTCTCGGTGCCTaGCTTGGAAGTCCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSALGA*LGSPLP
Trigger: TGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTCTGGGAACAGATCCATaGGTGGTGTCACTAAACGTT +
Preference number: 4 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCLGTDP*VVSLNV
Trigger: AACGTTTAGTGACACCACCCATGGATCTGTTCCCAG...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTTGGGCTCTGGCTCTaGAGTGATGGTTGTATTTAC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLFGLWL*SDGCIY
Trigger: GTAAATACAACCATCACTCCAGAGCCAGAGCCCAAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTAAAGGGGAGCTGACATaGTTGCTAACTGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAKGELT*LLTDVS
Trigger: GCTCACATCAGTTAGCAACCATGTCAGCTCCCCTTT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCTCCACAGGATCCGATaGCTTGATTATAATGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLLHRIR*LDYNAA
Trigger: AGCAGCATTATAATCAAGCCATCGGATCCTGTGGAG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACAGACAGACAGCTGTCTaGGGGGCAAAAGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDRQTAV*GAKESV
Trigger: GACACTTTCTTTTGCCCCCCAGACAGCTGTCTGTCT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCCCAAAAGAGAGGGCTaGACACCCTTCCCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPPKREG*TPFPPQ
Trigger: CTGGGGAGGGAAGGGTGTCCAGCCCTCTCTTTTGGG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGCCTTGGATCCTTCGTaGGGCAGGACGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPALDPS*GRTVEE
Trigger: CTCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCTGGTTAACTGGCCTTaGATCCTTCGTGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSLVNWP*ILRGAG
Trigger: TCCTGCCCCACGAAGGATCCAAGGCCAGTTAACCAG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNVSDSL*PNGKNY
Trigger: GTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGAC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATGCTTTCCCTCTTGCTaGGCACTTCCTAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILCFPSC*ALPRRQ
Trigger: CTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTACCTGATGATGAGGCCTaGGTCCAAACAGTCACACCT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILPDDEA*VQTVTP
Trigger: AGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGG...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTGGGGTGGCATCCTTaGCCCCACTGCAGATCCCTT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVGWHP*PHCRSL
Trigger: AAGGGATCTGCAGTGGGGCCAAGGATGCCACCCCAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACATTTCAGCTCCCGGGTaGGGTTTTCTTCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDISAPG*GFLPLQ
Trigger: TTGAAGAGGAAGAAAACCTCACCCGGGAGCTGAAAT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCACCTCTGACACAGTaGGGCTACTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPAPLTQ*GYFGSF
Trigger: GAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGC...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCAAGGCGGGGTCTTTGTaGTGGGCGGGGTTGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCKAGSL*WAGLSV
Trigger: TACAGACAACCCCGCCCATCACAAAGACCCCGCCTT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGATTTACGTGGCTTTCTaGAAAGTTTGCTGCATTTTG +
Preference number: 4 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQIYVAF*KVCCIL
Trigger: CAAAATGCAGCAAACTTTTCAGAAAGCCACGTAAAT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCCCAACTTTGGGATTTaGGAGCCAGCCTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCPNFGI*EPALPA
Trigger: GGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCCAACTTTGGGATTTaGGAGCCAGCCTTGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMPNFGI*EPALPA
Trigger: GGCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCAAAGGATACTACCTGTaGTTACATTTAAGGCCCACC +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLKGYYL*LHLRPT
Trigger: GGTGGGCCTTAAATGTAATCACAGGTAGTATCCTTT...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTCGGCCATGTCTACTaGCAGCCAATGTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPFGHVY*QPMWAP
Trigger: AGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTCTGACGCTAAACTCTaGTCAGTTTTATCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDSDAKL*SVLSRR
Trigger: CCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTGTTGTCTTCCTGATTaGGGTTCTTTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDCCLPD*GSFHFL
Trigger: CAGAAAATGAAAAGAACCGCAATCAGGAAGACAACA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTGCTAGTGGATGTGTaGCTCTCCCTCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLLVDV*LSLRAS
Trigger: TGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAATCCGCATGAGTATCTaGATGCTCTGCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILIRMSI*MLCFQE
Trigger: CTCCTGGAAGCAGAGCATGCAGATACTCATGCGGAT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTTTGAGAGCCAGCCTTaGCAGCCATTTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSFESQP*QPFEAQ
Trigger: CTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGCCTCCTTGGTCCCATaGTTGGAGCTGCTGCACCTA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMASLVP*LELLHL
Trigger: TAGGTGCAGCAGCTCCAAGCATGGGACCAAGGAGGC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTGGTTACCTTTCTCTTaGCAACCACAATCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNWLPFS*QPQSSL
Trigger: CAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTCCTTCTTGATTCTTTaGACGGCAGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDASFLIL*TAVWKR
Trigger: TCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACCCGCGCTGTGTGCTTaGACACAGAAGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPPALCA*TQKLHF
Trigger: GAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTCTTCCCTTCGCTCTaGGAGGAGCCGGGTACAAAC +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPFFPSL*EEPGTN
Trigger: GTTTGTACCCGGCTCCTCCCAGAGCGAAGGGAAGAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCTGTGGTTTGGGCTCTaGCTCTGGAGTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSLWFGL*LWSDGC
Trigger: ACAACCATCACTCCAGAGCCAGAGCCCAAACCACAG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGCTGCTGCTGTCAGATaGATATATAGTAATGCTACT +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTAAAVR*IYSNAT
Trigger: AGTAGCATTACTATATATCCATCTGACAGCAGCAGC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCCTGATTGTCTCCGCTaGAGGTGCATGGCTATTCCT +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSPDCLR*RCMAIP
Trigger: AGGAATAGCCATGCACCTCCAGCGGAGACAATCAGG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPCIGEG*AWVTVQ
Trigger: CTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTGCTTTCCCTCTTGCTaGGCACTTCCTAGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSCFPSC*ALPRRQ
Trigger: CTGCCTTCTAGGAAGTGCCCAGCAAGAGGGAAAGCA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGAGATACACAGACTTaGGTACTTTCCATAATACCT +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGDTQT*VLSIIP
Trigger: AGGTATTATGGAAAGTACCCAAGTCTGTGTATCTCC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACAACCACAATCTTCTTTaGCAGCTGGAGACCATCATC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDNHNLL*QLETII
Trigger: GATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTTCCACTCAAGGGGATaGGAAATGGTTACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDFHSRG*EMVTFL
Trigger: GAGAAAGGTAACCATTTCTCATCCCCTTGAGTGGAA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACTGCCCTCCTGTTGGTaGAACTGGGAGAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLPSCW*NWEKKP
Trigger: AGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGACATGGTTGCTAACTaGTGTGAGCTCTGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMDMVAN*CELCQP
Trigger: GGGCTGGCAGAGCTCACATCAGTTAGCAACCATGTC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGCACCTCTGACACAGTaGGGCTACTTTGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMAPLTQ*GYFGSF
Trigger: GAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGTTGCCTGTAGACACTaGGTGTACAGTCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSVACRH*VYSLPL
Trigger: AAGGGGAAGACTGTACACTCAGTGTCTACAGGCAAC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTACAATGAAGTCAGCTTaGAGTCTCCAGCCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSTMKSA*SLQPLE
Trigger: CTCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTGGAAATAGCATCTTaGGCATCAGAGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILLEIAS*ASEVGM
Trigger: CATCCCCACCTCTGATGCTCAAGATGCTATTTCCAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACAGGGAGGCTGCAAGTaGAGGATGGCAGCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLQGGCK*RMAALS
Trigger: ACTCAAGGCTGCCATCCTTCACTTGCAGCCTCCCTG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGCCTTGCCAGCCATTTaGAGCCCAGAGAAACAGCCT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCALPAI*SPEKQP
Trigger: AGGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACACGACACAGATCCTCTaGTCTCTTAATTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDTTQIL*SLNFLV
Trigger: GACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCGT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAAGTTCCCGCGCTGTGTaGTTGGACACAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPSSRAV*LDTEAS
Trigger: TGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACT...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGGCAGTAACAAGAGATaGTATGTCCAAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAGSNKR*YVQVII
Trigger: GATGATGACTTGGACATAGCATCTCTTGTTACTGCC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGCTTGCACCTCCAGGTaGCTTTGGAAGGTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMACTSR*LWKVSR
Trigger: TCTGCTCACCTTCCAAAGGCACCTGGAGGTGCAAGC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGAGATGCATGAGGCTTaGACCTCCAGGTGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPEMHEA*TSRCLW
Trigger: CCAAAGGCACCTGGAGGTGCAAGCCTCATGCATCTC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCAGAGGAGATTTTCTTaGTCAGATTTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLQRRFS*SDFSPH
Trigger: ATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTTTATCTCCTCCAGTTaGCTGGCTAATAATTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTFISSS*LANNLF
Trigger: AAACAAATTATTAGCCAGCCAACTGGAGGAGATAAA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGAAGCTTCACTTCCGTaGCCTCTAAACTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILEASLP*PLNLVL
Trigger: GAGGACTAAGTTTAGAGGCCACGGAAGTGAAGCTTC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGGGGAAGGTTGGGCCTaGGTGACTGTCCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLGEGWA*VTVQLV
Trigger: TACAAGCTGGACAGTCACCCAGGCCCAACCTTCCCC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTATGCATTGGGGAAGGTTaGGCCTGGGTGACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLCIGEG*AWVTVQ
Trigger: CTGGACAGTCACCCAGGCCCAACCTTCCCCAATGCA...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTATCTTCCCTTGTTTaGGGGCCAGAATGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILLSSLV*GPEWSN
Trigger: GTTGGACCATTCTGGCCCCCAAACAAGGGAAGATAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGCCACTGCTTTGCCCTaGTTTCCAGCGACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCATALP*FPATGS
Trigger: AGAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTCCACTCAAGGGGATaGGAAATGGTTACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILFHSRG*EMVTFL
Trigger: GAGAAAGGTAACCATTTCTCATCCCCTTGAGTGGAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTGCTACCTTCTGCCTaGATCACCTTGTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLLPSA*ITLSWR
Trigger: TCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTAATAGTTTTCATTGTTaGGAGCAAACTCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDANSFHC*EQTPCS
Trigger: GGAACAGGGAGTTTGCTCTCAACAATGAAAACTATT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACACAACTGCTGCAGGTTaGTTAACCCCTTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDTTAAG*LTPSLC
Trigger: ACATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGT...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTATTGGTGGAGGCTCTaGCAGATTTCACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDYWWRL*QISQIH
Trigger: ATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCACGGGTAAGCACCTCTaGCACAGTGAGGCTACTTTG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCTGKHL*HSEATL
Trigger: CAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGGCTGCGGCACTTCATaGAATACTCATGGGCCGACT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLGCGTS*NTHGPT
Trigger: AGTCGGCCCATGAGTATTTCATGAAGTGCCGCAGCC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGGGGTTGGGGAGGGATaGTGTCATTCCAATGGGTAT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMGVGEG*CHSNGY
Trigger: ATACCCATTGGAATGACATCATCCCTCCCCAACCCC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAAGGAAAGGAGATGCATaGGGCTTGCACCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLRKGDA*GLHLQV
Trigger: CACCTGGAGGTGCAAGCCTCATGCATCTCCTTTCCT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTCTGGAGGAAGTCTTaGGTCTTCCTCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMLWRKS*VFLLPG
Trigger: TCCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTCCCGAACACTCCACTaGCGGGGGTTATTTATGTGC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCSRTLH*RGLFMC
Trigger: GCACATAAATAACCCCCGTCAGTGGAGTGTTCGGGA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCCCGAACACTCCACTaGCGGGGGTTATTTATGTGC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSRTLH*RGLFMC
Trigger: GCACATAAATAACCCCCGTCAGTGGAGTGTTCGGGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGGGCTCCTGACTGACTaGCAGATAGATGATAAACAC +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSGLLTD*QIDDKH
Trigger: GTGTTTATCATCTATCTGTCAGTCAGTCAGGAGCCC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACAATCTCCGCCAACATaGTGGAGTTGCTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPQSPPT*WSCYLL
Trigger: CAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGAGTTCCCGCGCTGTGTaGTTGGACACAGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSSRAV*LDTEAS
Trigger: TGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGAGCAGCTCTGGGGCTaGTGCTGTCAGATGGATATA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCEQLWG*CCQMDI
Trigger: TATATCCATCTGACAGCAGCAGCCCCAGAGCTGCTC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCATTCTCTCCGCTTCTaGAAGCTGCAGGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPHSLRF*KLQGDV
Trigger: GACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCGGCGGCTCTCCCTATaGTTGCTGTTTTGGAAACAG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPRRLSL*LLFWKQ
Trigger: CTGTTTCCAAAACAGCAAGCATAGGGAGAGCCGCCG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTAGAGAAAGCAGGCGATaGCAGCAGCATTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPRESRR*QQHYWC
Trigger: GCACCAGTAATGCTGCTGGCATCGCCTGCTTTCTCT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTGACTAAAGGGGTCTaGTTTCCCTCTTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVTKGV*FPSCWA
Trigger: TGCCCAGCAAGAGGGAAAGCAGACCCCTTTAGTCAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCATCAGCTTGGTAAAGTaGGATGCCTCCTCCATGGGG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCISLVK*DASSMG
Trigger: CCCCATGGAGGAGGCATCGCACTTTACCAAGCTGAT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACCTCCAGCCTTTACTTaGTATTACAATGTTATTTTC +
Preference number: 4 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTPPAFT*YYNVIF
Trigger: GAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTTTGAGAGCCAGCCTTaGCAGCCATTTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCFESQP*QPFEAQ
Trigger: CTGGGCTTCAAATGGCTGGCAAGGCTGGCTCTCAAA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGACCAAGCAGCTCTATTaGCAGGTCCCCCAACTCACT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMTKQLY*QVPQLT
Trigger: AGTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTACTGCCAGCCAATGTaGGCTCCTAGAGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMYCQPM*APRGIQ
Trigger: TTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTACTGCCAGCCAATGTaGGCTCCTAGAGGCATCCAA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCYCQPM*APRGIQ
Trigger: TTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCTCCGCCAACATGCTaGAGTTGCTACCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSPPTC*SCYLLP
Trigger: AGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAGTTTCTCAATCTCTTaGTTAAGGTCTTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRSFSIS*LRSLTL
Trigger: CAAAGTCAAAGACCTTAACCAAGAGATTGAGAAACT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAGTTTCTCAATCTCTTaGTTAAGGTCTTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNSFSIS*LRSLTL
Trigger: CAAAGTCAAAGACCTTAACCAAGAGATTGAGAAACT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGTCAGCTCTACCCAATaGGTCACTGGGAACAGATCC +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPVSSTQ*VTGNRS
Trigger: GGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGAC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTCAGCTCTACCCAATaGGTCACTGGGAACAGATCC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVSSTQ*VTGNRS
Trigger: GGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGGGCTAAAGGGCCTTTaGCTTTTTACCCCAGCACCA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMGLKGL*LFTPAP
Trigger: TGGTGCTGGGGTAAAAAGCCAAAGGCCCTTTAGCCC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTTGTTTGGCCCTGGTTTaGAGACGGGTTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSCLALV*RRVSVS
Trigger: AGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACA...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCTTGCCTGGTTAACTaGCCTTGGATCCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSCLVN*PWILRG
Trigger: CCCACGAAGGATCCAAGGCCAGTTAACCAGGCAAGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGGCTTGTGTCTTGCCTaGTTAACTGGCCTTGGATCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMGLCLA*LTGLGS
Trigger: GGATCCAAGGCCAGTTAACCAGGCAAGACACAAGCC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTTTGGGGGCCAGAATaGTCCAACTACTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVWGPE*SNYLVD
Trigger: GTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGAAGTCTCCAGCCACTaGAGAGAAAGCAGGCGATGC +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLEVSSH*RESRRC
Trigger: GCATCGCCTGCTTTCTCTCCAGTGGCTGGAGACTTC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATGGTGGTGTACATTTTaGGAAGCGCACTACATAGGA +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILWWCTF*EAHYIG
Trigger: TCCTATGTAGTGCGCTTCCCAAAATGTACACCACCA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGACCACCCTTCCTTCTTaGTTCTTTGGACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMTTLPS*FFGRQC
Trigger: ACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACAGACAAGGTCAGGATaGACACTGGTTCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLQTRSG*TLVPML
Trigger: CAGCATGGGAACCAGTGTTCATCCTGACCTTGTCTG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTAGATGTTGGTGCTGCTaGAATGTGGAAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSRCWCC*NVERSR
Trigger: TCTGGATCTTTCCACATTTCAGCAGCACCAACATCT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTATTCAGTATATGTTCTaGGCTGGGAAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSIQYMF*AGKQQE
Trigger: TTCCTGCTGCTTCCCAGCTCAGAACATATACTGAAT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCGCATAGAAGACAGATaGTACACAGGGATGACATTG +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSRIEDR*YTGMTL
Trigger: CAATGTCATCCCTGTGTATCATCTGTCTTCTATGCG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCAATCTCCGCCAACATaGTGGAGTTGCTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMQSPPT*WSCYLL
Trigger: CAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTTACTTGACTTCCGTTaGCAAGCACGTGTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMLLDFR*QARVPS
Trigger: AGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACACCTCAAGGCTTCATaGGGACTGCTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLHLKAS*GLLSSI
Trigger: GATGGAAGACAGCAGTCCGCATGAAGCCTTGAGGTG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGGCAGTAACAAGAGATaGTATGTCCAAGTCATCATC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILGSNKR*YVQVII
Trigger: GATGATGACTTGGACATAGCATCTCTTGTTACTGCC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCACACAGACAGAGGCTaGCCTAGGATCCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMHTDRG*PRIQKQ
Trigger: TTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAACCAAGCAGCTCTATTaGCAGGTCCCCCAACTCACT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLTKQLY*QVPQLT
Trigger: AGTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACCAGAGGAGATTTTCTTaGTCAGATTTCTCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDQRRFS*SDFSPH
Trigger: ATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTG...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTCTCCTCCAGTTGGCTaGCTAATAATTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLSPPVG*LIICFY
Trigger: ATAAAAACAAATTATTAGCCAGCCAACTGGAGGAGA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCATGTCTGCCTTTGCTaGACAGGAAAGCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMHVCLC*TGKHLP
Trigger: GGGAAGATGCTTTCCTGTCCAGCAAAGGCAGACATG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGAAGCTTCACTTCCGTaGCCTCTAAACTTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPEASLP*PLNLVL
Trigger: GAGGACTAAGTTTAGAGGCCACGGAAGTGAAGCTTC...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAATAGAACAGGAGCCTTaGAATTCGGGCAACTGTTAT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILIEQEP*NSGNCY
Trigger: ATAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTAT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTGCCAGCAGCATTACTaGTGCTCAGGAAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPCQQHY*CSGKEM
Trigger: CATCTCCTTTCCTGAGCACCAGTAATGCTGCTGGCA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACCTGATGATGAGGCCTaGGTCCAAACAGTCACACCT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLPDDEA*VQTVTP
Trigger: AGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTAAACATGTTACATGCTaGTTCCTTCCCAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPKHVTC*FLPRGS
Trigger: GGAGCCCCTGGGAAGGAACCAGCATGTAACATGTTT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTCAGCCATTCGTTTCTaGAGCCGCTCAATCTCAGAT +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPSAIRF*SRSISD
Trigger: ATCTGAGATTGAGCGGCTTCAGAAACGAATGGCTGA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCATTCTTACTCCTGCTaGAGGCCTCTTCTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCHSYSC*RPLLAS
Trigger: AGAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAACCACCCTTCCTTCTTaGTTCTTTGGACGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLTTLPS*FFGRQC
Trigger: ACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAAATAGTTTTCATTGTTaGGAGCAAACTCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILNSFHC*EQTPCS
Trigger: GGAACAGGGAGTTTGCTCTCAACAATGAAAACTATT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCCAAGGTGGAAACAATaGAGTCAGCTTGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPPRWKQ*SQLEVS
Trigger: GGAGACTTCAAGCTGACTTCATTGTTTCCACCTTGG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCAAGGTGGAAACAATaGAGTCAGCTTGAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMPRWKQ*SQLEVS
Trigger: GGAGACTTCAAGCTGACTTCATTGTTTCCACCTTGG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTACAGACAGGGAAACTaGGGCTCCAAGAAGACAATG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCYRQGN*GSKKTM
Trigger: CATTGTCTTCTTGGAGCCTCAGTTTCCCTGTCTGTA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCCTCACTGCCAAATCTaGTACAGACAAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCPHCQI*YRQGQD
Trigger: ATCCTGACCTTGTCTGTATCAGATTTGGCAGTGAGG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTGGGAAGCAGAAGTATaGGCAATAGATTCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMWEAEV*AIDSCP
Trigger: GGGACAGGAATCTATTGCTCATACTTCTGCTTCCCA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGGGCTCCTGACTGACTaGCAGATAGATGATAAACAC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCGLLTD*QIDDKH
Trigger: GTGTTTATCATCTATCTGTCAGTCAGTCAGGAGCCC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACTGTTGTCTTCCTGATTaGGGTTCTTTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDCCLPD*GSFHFL
Trigger: CAGAAAATGAAAAGAACCGCAATCAGGAAGACAACA...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTCCATCACAACTGCTaGAGGTTGATTAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPFHHNC*RLINPF
Trigger: GAAGGGGTTAATCAACCTGCAGCAGTTGTGATGGAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR GCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGTCTTCCATCACAACTaGTGCAGGTTGATTAACCCC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMVFHHN*CRLINP
Trigger: GGGGTTAATCAACCTGCAGCAGTTGTGATGGAAGAC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGAAATTCATAGGAGATaGACAGGAACAGGAGATACA +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILEIHRR*TGTGDT
Trigger: TGTATCTCCTGTTCCTGTGCATCTCCTATGAATTTC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAATTTATGTGCAAGCTTaGCTACAGCTGAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLIYVQA*LQLRVG
Trigger: CCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAAT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTCTCCTCCAGTTGGCTaGCTAATAATTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDASPPVG*LIICFY
Trigger: ATAAAAACAAATTATTAGCCAGCCAACTGGAGGAGA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTTTATCTCCTCCAGTTaGCTGGCTAATAATTTGTTT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAFISSS*LANNLF
Trigger: AAACAAATTATTAGCCAGCCAACTGGAGGAGATAAA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTATAGAACAGGAGCCTTaGAATTCGGGCAACTGTTAT +
Preference number: 4 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSIEQEP*NSGNCY
Trigger: ATAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTAT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTGTTTGGCCCTGGTTTaGAGACGGGTTTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMCLALV*RRVSVS
Trigger: AGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTAAAGAAAGTGTCACTTaGAATTGGGTATACGCTTAT +
Preference number: 4 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAKESVT*NWVYAY
Trigger: ATAAGCGTATACCCAATTCCAAGTGACACTTTCTTT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGAACCACAATCTTCTTTaGCAGCTGGAGACCATCATC +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMNHNLL*QLETII
Trigger: GATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTGATGTCATGTTTGTaGATGGAGAGCTCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVMSCL*MESSKG
Trigger: CCCTTTTGAGCTCTCCATTCACAAACATGACATCAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCAGATGTTGGTGCTGCTaGAATGTGGAAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCRCWCC*NVERSR
Trigger: TCTGGATCTTTCCACATTTCAGCAGCACCAACATCT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTATTCAGTATATGTTCTaGGCTGGGAAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPIQYMF*AGKQQE
Trigger: TTCCTGCTGCTTCCCAGCTCAGAACATATACTGAAT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCACGACACAGATCCTCTaGTCTCTTAATTTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCTTQIL*SLNFLV
Trigger: GACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCGT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATGTTGTCTTCCTGATTaGGGTTCTTTTCATTTTCTG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILCCLPD*GSFHFL
Trigger: CAGAAAATGAAAAGAACCGCAATCAGGAAGACAACA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGTCTTCCATCACAACTaGTGCAGGTTGATTAACCCC +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLVFHHN*CRLINP
Trigger: GGGGTTAATCAACCTGCAGCAGTTGTGATGGAAGAC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAACAAGCAAATCCTATTaGACTCAGATTTCAAGATGG +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILTSKSY*TQISRW
Trigger: CCATCTTGAAATCTGAGTGCAATAGGATTTGCTTGT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTCCTTCTTGATTCTTTaGACGGCAGTGTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPSFLIL*TAVWKR
Trigger: TCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTTCCCTCTGGCCAAATaGCAAAAATTACCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPFPLAK*QKLPEP
Trigger: TGGCTCAGGTAATTTTTGCCATTTGGCCAGAGGGAA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTGGTGGTGTACATTTTaGGAAGCGCACTACATAGGA +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCWWCTF*EAHYIG
Trigger: TCCTATGTAGTGCGCTTCCCAAAATGTACACCACCA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTACAACTGCTGCAGGTTaGTTAACCCCTTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPTTAAG*LTPSLC
Trigger: ACATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCATAAAGGTAGCCTTTaGAAGAGGATCCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMHKGSL*KRIPSL
Trigger: CAAAGAAGGGATCCTCTTTCAAAGGCTACCTTTATG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAAGAACAGCCAGAGTTTaGAGCCTGAGTTACTTGACT +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLRTARV*SLSYLT
Trigger: AGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAATCTTCTTTGACAGCTaGAGACCATCATCAATCTCT +
Preference number: 4 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPIFFDS*RPSSIS
Trigger: AGAGATTGATGATGGTCTCCAGCTGTCAAAGAAGAT...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CCA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATCTCCTCCAGTTGGCTaGCTAATAATTTGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: REEPTRMIPSTSKNHPILSPPVG*LIICFY
Trigger: ATAAAAACAAATTATTAGCCAGCCAACTGGAGGAGA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTCTCTGATTCCCTCTaGCCAAATGGCAAAAATTAC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVSDSL*PNGKNY
Trigger: GTAATTTTTGCCATTTGGCCAGAGGGAATCAGAGAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
3UTR CAA 72 bp TGCCTCATCCCAGCATCCTTATCTGCAAAGTCCCTTTaGCCATATAAGATGATAAAAACATGTTACATGCTG +
Preference number: 4 (lower is better)
Translates to: CLIPASLSAKSL*PYKMIKTCYML
Trigger: CAGCATGTAACATGTTTTTATCATCTTATATGGCAAAAGGGACTTTGCAGATAAGGATGCTGGGATGAGGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR TCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCAATAGTTTTCATTGTTaGGAGCAAACTCCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCNSFHC*EQTPCS
Trigger: GGAACAGGGAGTTTGCTCTCAACAATGAAAACTATT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGCTGCTGCTGTCAGATaGATATATAGTAATGCTACT +
Preference number: 4 (lower is better)
Translates to: RETASSLYLLLQCYFLQCAAAVR*IYSNAT
Trigger: AGTAGCATTACTATATATCCATCTGACAGCAGCAGC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGATCTTCTTTGACAGCTaGAGACCATCATCAATCATG +
Preference number: 4 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMIFFDS*RPSSIM
Trigger: CATGATTGATGATGGTCTCCAGCTGTCAAAGAAGAT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CCA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAACTTCCCCATGTGACTaGTATAAGGAACCTAACCAA +
Preference number: 4 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLTSPCD*YKEPNQ
Trigger: TTGGTTAGGTTCCTTATACCAGTCACATGGGGAAGT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR GCA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTATCAGTTCATTTCCTTaGTCTTTTCAGCTTCTAGGT +
Preference number: 4 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPISSFP*SFQLLG
Trigger: ACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGAT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 90 bp AGCGAAGGGTTCCGCCGCTCAGCTGCCAGCGACCGGCGCCTCCTCTaGCTCCGCGGGACTGACAATGAGGGGCGGGGCCAAATTGTGACG +
Preference number: 5 (lower is better)
Translates to: SEGFRRSAASDRRLL*LRGTDNEGRGQIVT
Trigger: CGTCACAATTTGGCCCCGCCCCTCATTGTCAGTCCCGCGGAGCCAGAGGAGGCGCCGGTCGCTGGCAGCTGAGCGGCGGAACCCTTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS TCA 90 bp TCCCCTCCTGCGCCAGTGAGCCATGAATCCGGCTGCGGCACTTCATaGAATACTCATGGGCCGACTGCACCAGGCTTGCGGGCGGCGGGG +
Preference number: 5 (lower is better)
Translates to: SPPAPVSHESGCGTS*NTHGPTAPGLRAAG
Trigger: CCCCGCCGCCCGCAAGCCTGGTGCAGTCGGCCCATGAGTATTTCATGAAGTGCCGCAGCCGGATTCATGGCTCACTGGCGCAGGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGGTGGGGTGGCATCCTaGGCCCCACTGCAGATCCCT +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFGGVAS*APLQIP
Trigger: AGGGATCTGCAGTGGGGCCAAGGATGCCACCCCACC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 90 bp AGACAACAGACACCCAGCGGGCTCAGTTCTCCTCAGCACAGGGCCTaGTTGGCCGTAATCGTTCCTCGGCCCGTACTCGCCCAGACTCTG +
Preference number: 5 (lower is better)
Translates to: RQQTPSGLSSPQHRA*LAVIVPRPVLAQTL
Trigger: CAGAGTCTGGGCGAGTACGGGCCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGGAGAACTGAGCCCGCTGGGTGTCTGTTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCTCTCGGTGCCTGGCTaGGAAGTCCCCTTCCACGCT +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFLSVPG*EVPFHA
Trigger: AGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGGTGGGGCGCTGGCGCTaGACAGGACTCAGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQVGRWR*TGLSLS
Trigger: AGAGAGGCTGAGTCCTGTCAAGCGCCAGCGCCCCAC...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGGTGGGGTGGCATCCTaGGCCCCACTGCAGATCCCT +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVGGVAS*APLQIP
Trigger: AGGGATCTGCAGTGGGGCCAAGGATGCCACCCCACC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp CGCTGGCGCTTGACAGGACTCAGCCTCTCTCCCCTCCTGCGCCAGTaGGCCATGAATCCGGCTGCGGCACTTCATGAAATACTCATGGGC +
Preference number: 5 (lower is better)
Translates to: RWRLTGLSLSPLLRQ*AMNPAAALHEILMG
Trigger: GCCCATGAGTATTTCATGAAGTGCCGCAGCCGGATTCATGGCTCACTGGCGCAGGAGGGGAGAGAGGCTGAGTCCTGTCAAGCGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS TCA 90 bp GTTAACTGGCCTTGGATCCTTCGTGGGGCAGGACGGTGGAAGAGCTaGGAAGCAGGAGCAGAGGGCAGACAACAGACACCCAGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VNWPWILRGAGRWKS*EAGAEGRQQTPSGL
Trigger: GAGCCCGCTGGGTGTCTGTTGTCTGCCCTCTGCTCCTGCTTCTCAGCTCTTCCACCGTCCTGCCCCACGAAGGATCCAAGGCCAGTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTCTCGGTGCCTGGCTaGGAAGTCCCCTTCCACGCT +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLSVPG*EVPFHA
Trigger: AGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACGGGCATCCCCTGAACTaGGTCCTACCCTTCGAGTGC +
Preference number: 5 (lower is better)
Translates to: IPERPAACEDLLTEAAENGHPLN*VLPFEC
Trigger: GCACTCGAAGGGTAGGACCAAGTTCAGGGGATGCCC...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS CCA 90 bp TTGTCTTCTCCACTTTTCCCTTCAGTCCGCTCTCGGTGCCTGGCTTaGAAGTCCCCTTCCACGCTTTACTGTGCTCCTGAGCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LSSPLFPSVRSRCLA*KSPSTLYCAPEQPG
Trigger: CCCCGGCTGCTCAGGAGCACAGTAAAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGGAGAAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp ACCCGATTCCGACGGGTAAGCACCTCTGACACAGTGAGGCTACTTTaGGTCCTTCTGGAGGAGGGCTCAGGGGCATCCCCTGAACTTGGT +
Preference number: 5 (lower is better)
Translates to: TRFRRVSTSDTVRLL*VLLEEGSGASPELG
Trigger: ACCAAGTTCAGGGGATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGTCGGAATCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCACAGTGAGGCTACTTaGGGTCCTTCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVHSEAT*GPSGGG
Trigger: CCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGTCATAAAAGTGGGTTaGTTGACCGGGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFVIKVG*LTGGSG
Trigger: CCCACTGCCCCCGGTCAACAAACCCACTTTTATGAC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp GACAGTGATGGTGTCTCCTACCCGATTCCGACGGGTAAGCACCTCTaGCACAGTGAGGCTACTTTGGGTCCTTCTGGAGGAGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: DSDGVSYPIPTGKHL*HSEATLGPSGGGLR
Trigger: CCTGAGCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGTCGGAATCGGGTAGGAGACACCATCACTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp GAGCTGACATGGTTGCTAACTGATGTGAGCTCTGCCAGCCCCACCTaGATATTGCTAGTGGATGTGTGCCTCTCCCTCAGGGCCTCACCC +
Preference number: 5 (lower is better)
Translates to: ELTWLLTDVSSASPT*ILLVDVCLSLRASP
Trigger: GGGTGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAATATCCAGGTGGGGCTGGCAGAGCTCACATCAGTTAGCAACCATGTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTGACCACCCTTCCTTCTaGATTCTTTGGACGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLDHPSF*ILWTAV
Trigger: CACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTC...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTCCCGCGCTGTGTGCTaGGACACAGAAGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQSRAVC*DTEASL
Trigger: AAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGGA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACAGCACGTGTCCCCTCTaGCCAAAGACAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: IPERPAACEDLLTEAAENSTCPL*PKTVSE
Trigger: CTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGCT...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCAGCCCCACCTGGATATaGCTAGTGGATGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVSPTWI*LVDVCL
Trigger: GAGGCACACATCCACTAGCAATATCCAGGTGGGGCT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTCCTTGGTCCCATGCTaGGAGCTGCTGCACCTAGAC +
Preference number: 5 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWSLVPC*ELLHLD
Trigger: GTCTAGGTGCAGCAGCTCCAAGCATGGGACCAAGGA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS GCA 90 bp GCACCCGCTGGCGCAGCACTTCAATCTCCGCCAACATGCTGGAGTTaGTACCTTCTGCCTGAATCACCTTGTCCTGGAGATCCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: APAGAALQSPPTCWS*YLLPESPCPGDPGV
Trigger: AACTCCTGGATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAGCGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 90 bp CGACTCAGCACTGAGGGCTGCTCCCTAGACTTCTTCCCTTCGCTCTaGGAGGAGCCGGGTACAAACCGGTCTTCAGTTTTCTTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RLSTEGCSLDFFPSL*EEPGTNRSSVFFVS
Trigger: GGAGACAAAGAAAACTGAAGACCGGTTTGTACCCGGCTCCTCCCAGAGCGAAGGGAAGAAGTCTAGGGAGCAGCCCTCAGTGCTGAGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp TCGTGTTGTCTTCTCCACTTTTCCCTTCAGTCCGCTCTCGGTGCCTaGCTTGGAAGTCCCCTTCCACGCTTTACTGTGCTCCTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SCCLLHFSLQSALGA*LGSPLPRFTVLLSS
Trigger: GCTGCTCAGGAGCACAGTAAAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGGAGAAGACAACACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTTCTCTGCCACTGGATTaGATGACTCGACACCTCAAG +
Preference number: 5 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLSLPLD*MTRHLK
Trigger: CTTGAGGTGTCGAGTCATCAAATCCAGTGGCAGAGA...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTTTACCCCAGCACCATaGGTATCTGGGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: IPERPAACEDLLTEAAENFTPAP*VSGSSM
Trigger: CATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTTACCCCAGCACCATaGGTATCTGGGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQFTPAP*VSGSSM
Trigger: CATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGGGCATCCCCTGAACTaGGTCCTACCCTTCGAGTGC +
Preference number: 5 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTGHPLN*VLPFEC
Trigger: GCACTCGAAGGGTAGGACCAAGTTCAGGGGATGCCC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCAGCACAGGGCCTGGTaGGCCGTAATCGTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRQHRAW*AVIVPR
Trigger: CCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGATCATGATAGTCGACTaGCAGAAATCCGGGGCCCAC +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQIMIVD*QKSGAH
Trigger: GTGGGCCCCGGATTTCTGCAAGTCGACTATCATGAT...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTCCCAACTTTGGGATTaGAGAGCCAGCCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLSQLWD*RASLAS
Trigger: GCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS GCA 90 bp ACGTTCGTGTTGTCTTCTCCACTTTTCCCTTCAGTCCGCTCTCGGTaGCTGGCTTGGAAGTCCCCTTCCACGCTTTACTGTGCTCCTGAG +
Preference number: 5 (lower is better)
Translates to: TFVLSSPLFPSVRSR*LAWKSPSTLYCAPE
Trigger: CTCAGGAGCACAGTAAAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGGAGAAGACAACACGAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp TTCTCAGCACCCGCTGGCGCAGCACTTCAATCTCCGCCAACATGCTaGAGTTGCTACCTTCTGCCTGAATCACCTTGTCCTGGAGATCCA +
Preference number: 5 (lower is better)
Translates to: FSAPAGAALQSPPTC*SCYLLPESPCPGDP
Trigger: TGGATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAGCGGGTGCTGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS-3UTR CAA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACCCATTGGCAGCCTTTTaGCCTTTAGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: IPERPAACEDLLTEAAENPLAAF*PLESPS
Trigger: AGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGG...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTCTCTGCCACTGGATTaGATGACTCGACACCTCAAG +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVSLPLD*MTRHLK
Trigger: CTTGAGGTGTCGAGTCATCAAATCCAGTGGCAGAGA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAAAGGCAGTTGTCTCTaGACCTCTGCGGCCCCGAAC +
Preference number: 5 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQKGSCL*TSAAPN
Trigger: GTTCGGGGCCGCAGAGGTCAAGAGACAACTGCCTTT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGTGCATTGGGGAAGGTaGGGCCTGGGTGACTGTCCA +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNVHWGR*GLGDCP
Trigger: TGGACAGTCACCCAGGCCCAACCTTCCCCAATGCAC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGACATGCCTCCCAACTTaGGGATTTGAGAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLTCLPT*GFESQP
Trigger: AGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATGT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp TTGTTGAGAGCAAACTCCCTGTTCCGGAGTCGTTCCCGCTTATGCTaGGGAGACAGTTCCCGCGCTGTGTGCTTGGACACAGAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LLRANSLFRSRSRLC*GDSSRAVCLDTEAS
Trigger: TGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACTGTCTCCTCAGCATAAGCGGGAACGACTCCGGAACAGGGAGTTTGCTCTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 90 bp GCTGGAGGCCGTCTCCTTGTAGCTTGTAAATTCGGCCATGTCTACTaGCAGCCAATGTGGGCTCCTAGAGGCATCCAATTCCACTCAAGG +
Preference number: 5 (lower is better)
Translates to: AGGRLLVACKFGHVY*QPMWAPRGIQFHSR
Trigger: CCTTGAGTGGAATTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAATTTACAAGCTACAAGGAGACGGCCTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS GCA 90 bp GCGCAGCACTTCAATCTCCGCCAACATGCTGGAGTTGCTACCTTCTaGCTGAATCACCTTGTCCTGGAGATCCAGGAGTTCATCCTCTGC +
Preference number: 5 (lower is better)
Translates to: AQHFNLRQHAGVATF*LNHLVLEIQEFILC
Trigger: GCAGAGGATGAACTCCTGGATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 90 bp CAATTCTCAGCACCCGCTGGCGCAGCACTTCAATCTCCGCCAACATaGTGGAGTTGCTACCTTCTGCCTGAATCACCTTGTCCTGGAGAT +
Preference number: 5 (lower is better)
Translates to: QFSAPAGAALQSPPT*WSCYLLPESPCPGD
Trigger: ATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAGCGGGTGCTGAGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 90 bp CAGCCTGAGTTACTTGACTTCCGTTGCCAAGCACGTGTCCCCTCTTaGCAAAGACAGTCTCAGAGGAGGTGTCAGAAGCCTTGTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QPELLDFRCQARVPS*QRQSQRRCQKPCQL
Trigger: GAGCTGACAAGGCTTCTGACACCTCCTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp GACAGTTCCCGCGCTGTGTGCTTGGACACAGAAGCTTCACTTCCGTaGCCTCTAAACTTAGTCCTCTCATGTCTGCCTTTGCTGGACAGG +
Preference number: 5 (lower is better)
Translates to: DSSRAVCLDTEASLP*PLNLVLSCLPLLDR
Trigger: CCTGTCCAGCAAAGGCAGACATGAGAGGACTAAGTTTAGAGGCCACGGAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGGAACTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp AACTTGGTCCTACCCTTCGAGTGCCCTGCTCAAAAAGGCAGGACCTaGGCTGTTCGAGTTCTGAGAAGTCTGTGGAAGACCTCTGGGTGT +
Preference number: 5 (lower is better)
Translates to: NLVLPFECPAQKGRT*AVRVLRSLWKTSGC
Trigger: ACACCCAGAGGTCTTCCACAGACTTCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGACCAAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp ATCCCTGAGAGGCCAGCAGCCTGTGAAGATCTGCTAACTGAGGCGGCCGAGAACTTCCTTCTTGATTCTTaGGACGGCAGTGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: IPERPAACEDLLTEAAENFLLDS*DGSVEE
Trigger: CTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAA...GTTCTCGGCCGCCTCAGTTAGCAGATCTTCACAGGCTGCTGGCCTCTCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTCACAACTGCTGCAGGTaGATTAACCCCTTCTTTATG +
Preference number: 5 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLHNCCR*INPFFM
Trigger: CATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGTG...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTACTTGTCACTTTGTTaGGCCCTGGTTTGGAGACGG +
Preference number: 5 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWYLSLC*ALVWRR
Trigger: CCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGTACTTGTCACTTTGTTaGGCCCTGGTTTGGAGACGG +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLYLSLC*ALVWRR
Trigger: CCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTA...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCACAGGATCCGATGGCTaGATTATAATGCTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVTGSDG*IIMLLR
Trigger: TCGGAGCAGCATTATAATCAAGCCATCGGATCCTGT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAAAGGCAGTTGTCTCTaGACCTCTGCGGCCCCGAAC +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRKGSCL*TSAAPN
Trigger: GTTCGGGGCCGCAGAGGTCAAGAGACAACTGCCTTT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCGGCTCTCCCTATGCTaGCTGTTTTGGAAACAGTCA +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLRLSLC*LFWKQS
Trigger: TGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCCG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACT +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQFSSQG*CLAWLT
Trigger: AGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCCTTCAACAGGACATTTaGAGTAGCAGCAGATGTTGG +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFLQQDI*SSSRCW
Trigger: CCAACATCTGCTGCTACTCAAAATGTCCTGTTGAAG...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTATTTATGTGCAAGCTaGCCTACAGCTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWYLCAS*PTAEGG
Trigger: CCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp CATCTGAGAAGCCCACTTCTGAAGGGGCACTATGGCTTTTCCACCTaGTTGTCTCCGCTGGAGGTGCATGGCTATTCCTCTCCACAGGAT +
Preference number: 5 (lower is better)
Translates to: HLRSPLLKGHYGFST*LSPLEVHGYSSPQD
Trigger: ATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGAAGTGGGCTTCTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 90 bp GCAGTTCAGACGGATCCAGGGAGTTGTGCAGTTGCCTGTAGACACTaGGTGTACAGTCTTCCCCTTCTTCCTCCATGCTTGCTGAGTGGT +
Preference number: 5 (lower is better)
Translates to: AVQTDPGSCAVACRH*VYSLPLLPPCLLSG
Trigger: ACCACTCAGCAAGCATGGAGGAAGAAGGGGAAGACTGTACACTCAGTGTCTACAGGCAACTGCACAACTCCCTGGATCCGTCTGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS GCA 90 bp CTGAGTCCCACTGTCTGTACTCACCCCCATGTGAGAAGCTTTTGCTaGCCTCCTGTTGGTGAAACTGGGAGAAGAAACCTGCCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LSPTVCTHPHVRSFC*PPVGETGRRNLPVA
Trigger: AGCAACAGGCAGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAGACAGTGGGACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 90 bp CTCCTGAGTCCCACTGTCTGTACTCACCCCCATGTGAGAAGCTTTTaGTGCCCTCCTGTTGGTGAAACTGGGAGAAGAAACCTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LLSPTVCTHPHVRSF*CPPVGETGRRNLPV
Trigger: AACAGGCAGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAGACAGTGGGACTCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 90 bp TTCTGGCCTGTCCTTCAGGGGCCCATCTGCCATTCTCTCCGCTTCTaGAAGCTGCAGGGTGATGTCATGTTTGTGAATGGAGAGCTCAAA +
Preference number: 5 (lower is better)
Translates to: FWPVLQGPICHSLRF*KLQGDVMFVNGELK
Trigger: TTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATGGCAGATGGGCCCCTGAAGGACAGGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp TGTCTCCGCTGGAGGTGCATGGCTATTCCTCTCCACAGGATCCGATaGCTTGATTATAATGCTGCTCCGAGAGACCACTGTTTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CLRWRCMAIPLHRIR*LDYNAAPRDHCFWP
Trigger: AGGCCAGAAACAGTGGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCTTAATTTCCTCGTCTTaGCCTTCAATTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFLISSS*PSILST
Trigger: GGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAA...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGGGTCTTCAGTTTTCTTaGTCTCCTGAGTCCCACTGT +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLGLQFS*SPESHC
Trigger: ACAGTGGGACTCAGGAGACAAAGAAAACTGAAGACC...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGAGGTGTCAGAAGCCTaGTCAGCTCTACCCAATGGG +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPREVSEA*SALPNG
Trigger: CCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCACAACTGCTGCAGGTaGATTAACCCCTTCTTTATG +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVHNCCR*INPFFM
Trigger: CATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGTG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAGCCCCACCTGGATATaGCTAGTGGATGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRSPTWI*LVDVCL
Trigger: GAGGCACACATCCACTAGCAATATCCAGGTGGGGCT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCACAGTGAGGCTACTTaGGGTCCTTCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLHSEAT*GPSGGG
Trigger: CCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCTTCTTCCTCCATGCTaGCTGAGTGGTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRLLPPC*LSGSRL
Trigger: CAGCCTGGAACCACTCAGCAAGCATGGAGGAAGAAG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGAATGGTCCAACTACTaGGTGGACAGGGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQEWSNY*VDRDKE
Trigger: CTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACCCTCTGGAGGAAGTCTaGAGTCTTCCTCTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNPLEEV*SLPLAR
Trigger: CCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAGG...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGCTTGGAAATAGCATCTaGAGCATCAGAGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLLGNSI*SIRGGD
Trigger: ATCCCCACCTCTGATGCTCAAGATGCTATTTCCAAG...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCCTTCAACAGGACATTTaGAGTAGCAGCAGATGTTGG +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVLQQDI*SSSRCW
Trigger: CCAACATCTGCTGCTACTCAAAATGTCCTGTTGAAG...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAAGCCTTGCCAGCCATTaGAAGCCCAGAGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTSLASH*KPRETA
Trigger: GGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCT...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGAACCAAGCAGCTCTATaGCCAGGTCCCCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRNQAAL*PGPPTH
Trigger: GTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGTT...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp GGGATGAGAAATGGTTACCTTTCTCTTGGCAACCACAATCTTCTTTaGCAGCTGGAGACCATCATCAATCTCTGCGGCCCCGAACCGCGC +
Preference number: 5 (lower is better)
Translates to: GMRNGYLSLGNHNLL*QLETIINLCGPEPR
Trigger: GCGCGGTTCGGGGCCGCAGAGATTGATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATTTCTCATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS CCA 90 bp GGGGCACTATGGCTTTTCCACCTGATTGTCTCCGCTGGAGGTGCATaGCTATTCCTCTCCACAGGATCCGATGGCTTGATTATAATGCTG +
Preference number: 5 (lower is better)
Translates to: GALWLFHLIVSAGGA*LFLSTGSDGLIIML
Trigger: CAGCATTATAATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp GTAACATGTCTGGCATCTGAGAAGCCCACTTCTGAAGGGGCACTATaGCTTTTCCACCTGATTGTCTCCGCTGGAGGTGCATGGCTATTC +
Preference number: 5 (lower is better)
Translates to: VTCLASEKPTSEGAL*LFHLIVSAGGAWLF
Trigger: GAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGAAGTGGGCTTCTCAGATGCCAGACATGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp GGCCTCCTCCTGTTGCCCAGAGCTCCCCATCAGCTGCAGCTGCTTCTTGTGCTTATGGTTACCTTTCTCTaGGCAACCACAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: GLLLLPRAPHQLQLLLVLMVTFL*ATTIFF
Trigger: AAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCAT...AAGCACAAGAAGCAGCTGCAGCTGATGGGGAGCTCTGGGCAACAGGAGGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTAATTTCCTCGTCTTaGCCTTCAATTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLISSS*PSILST
Trigger: GGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAA...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCTCAGAGGAGATTTTCTaGGTCAGATTTCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVSEEIF*VRFLSS
Trigger: TGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGA...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACAGACCACCCTTCCTTCTaGATTCTTTGGACGGCAGTG +
Preference number: 5 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTDHPSF*ILWTAV
Trigger: CACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTC...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGGGAGCTGACATGGTaGCTAACTGATGTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGELTW*LTDVSS
Trigger: AGAGCTCACATCAGTTAGCAACCATGTCAGCTCCCC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGAGCCGAGAAGAATTTTaGACTCCTGCTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQSREEF*TPAVCW
Trigger: CCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCT...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCAGGAGATACACAGACTaGGGTACTTTCCATAATACC +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVRRYTD*GTFHNT
Trigger: GGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCT...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGCAATAACAGTTTATTaGAGGGCTACTTTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFAITVY*RATFLA
Trigger: GGCTAAGAAAGTAGCCCTCAAATAAACTGTTATTGC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 90 bp GAAGCCTTGTCAGCTCTACCCAATGGGTCACTGGGAACAGATCCATaGGTGGTGTCACTAAACGTTCGTGTTGTCTTCTCCACTTTTCCC +
Preference number: 5 (lower is better)
Translates to: EALSALPNGSLGTDP*VVSLNVRVVFSTFP
Trigger: GGGAAAAGTGGAGAAGACAACACGAACGTTTAGTGACACCACCCATGGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGACAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGTCTAGTTCTTTCACTTaGACTCTGAGCATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWSSSFT*TLSISS
Trigger: GCTGGAAATGCTCAGAGTCAAAGTGAAAGAACTAGA...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTTCCTTCTTGATTCTTaGGACGGCAGTGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDFLLDS*DGSVEE
Trigger: CTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGAGGTGTCAGAAGCCTaGTCAGCTCTACCCAATGGG +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAEVSEA*SALPNG
Trigger: CCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGATAGAACAGGAGCCTaGGAATTCGGGCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTDRTGA*EFGQLL
Trigger: TAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTATC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GCTTCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGCTTCTTTATGTGAGGTaGAAAATCCCTGAAGGATGT +
Preference number: 5 (lower is better)
Translates to: ASSRTPDDEAWVQTVTPQLLYVR*KIPEGC
Trigger: ACATCCTTCAGGGATTTTCAACCTCACATAAAGAAG...CTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTTGTTTGGCCCTGGTTaGGAGACGGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNLFGPG*ETGFCF
Trigger: GAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTAGCCCCACCTGGATATaGCTAGTGGATGTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCSPTWI*LVDVCL
Trigger: GAGGCACACATCCACTAGCAATATCCAGGTGGGGCT...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGGGCATCCCCTGAACTaGGTCCTACCCTTCGAGTGC +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILGHPLN*VLPFEC
Trigger: GCACTCGAAGGGTAGGACCAAGTTCAGGGGATGCCC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCTCTTTCAAAGGCAGTaGTCTCTTGACCTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLLFQRQ*SLDLCG
Trigger: GCCGCAGAGGTCAAGAGACAACTGCCTTTGAAAGAG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCAGCACAGGGCCTGGTaGGCCGTAATCGTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSQHRAW*AVIVPR
Trigger: CCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTCACACTTTGCAGATaGGGAAACAGGCCCACGGAG +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLFTLCR*GNRPTE
Trigger: CTCCGTGGGCCTGTTTCCCAATCTGCAAAGTGTGAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCACTGACGGGGGTTATTTATGTGCAAGCTTGCCTACAGCTGAGGGTGGGGTGGAGGAGATACACAGACTaGGGTACTTTCCATAATACC +
Preference number: 5 (lower is better)
Translates to: PLTGVIYVQACLQLRVGWRRYTD*GTFHNT
Trigger: GGTATTATGGAAAGTACCCAAGTCTGTGTATCTCCT...CCACCCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATAACCCCCGTCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TGCACCCAAGGAGCCCTGAGCCACTGCTTTGCCCTGGTTTCCAGCGACAGGTTCGCCTCCAGCCTTTACTaGCTATTACAATGTTATTTT +
Preference number: 5 (lower is better)
Translates to: CTQGALSHCFALVSSDRFASSLY*LLQCYF
Trigger: AAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGC...GAACCTGTCGCTGGAAACCAGGGCAAAGCAGTGGCTCAGGGCTCCTTGGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGTATTTATGTGCAAGCTaGCCTACAGCTGAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRYLCAS*PTAEGG
Trigger: CCCACCCTCAGCTGTAGGCAAGCTTGCACATAAATA...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp GCCATTCTCTCCGCTTCTGCAAGCTGCAGGGTGATGTCATGTTTGTaGATGGAGAGCTCAAAAGGGGAGCTGACATGGTTGCTAACTGAT +
Preference number: 5 (lower is better)
Translates to: AILSASASCRVMSCL*MESSKGELTWLLTD
Trigger: ATCAGTTAGCAACCATGTCAGCTCCCCTTTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp CTACCTGCTTTAGGTAGTCCAGACCACCCTTCCTTCTTGATTCTTTaGACGGCAGTGTGGAAGAGATGCCATCCTCAATCCGTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: LPALGSPDHPSFLIL*TAVWKRCHPQSVGH
Trigger: ATGACCTACGGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTCTGGACTACCTAAAGCAGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS-3UTR CAA 90 bp TCCTCCAGGACCCCTGATGATGAGGCCTGGGTCCAAACAGTCACACCTCAGTTGATGGTTACCTTTCTCTaGGCAACCACAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SSRTPDDEAWVQTVTPQLMVTFL*ATTIFF
Trigger: AAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCAT...CAACTGAGGTGTGACTGTTTGGACCCAGGCCTCATCATCAGGGGTCCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGGGTCTTCAGTTTTCTTaGTCTCCTGAGTCCCACTGT +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRGLQFS*SPESHC
Trigger: ACAGTGGGACTCAGGAGACAAAGAAAACTGAAGACC...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACTCTCGGTGCCTGGCTaGGAAGTCCCCTTCCACGCT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLSVPG*EVPFHA
Trigger: AGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTGCAGCCTGAGTTACTaGACTTCCGTTGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDACSLSY*TSVAKH
Trigger: GTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACCACAACTGCTGCAGGTaGATTAACCCCTTCTTTATG +
Preference number: 5 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDHNCCR*INPFFM
Trigger: CATAAAGAAGGGGTTAATCAACCTGCAGCAGTTGTG...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTCAACAATAACAGGTTaGATGATGGCTCTAGACCGC +
Preference number: 5 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSTITG*MMALDR
Trigger: GCGGTCTAGAGCCATCATCAAACCTGTTATTGTTGA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGGGGAGCTGACATGGTaGCTAACTGATGTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAGELTW*LTDVSS
Trigger: AGAGCTCACATCAGTTAGCAACCATGTCAGCTCCCC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCCGGCTCTCCCTATGCTaGCTGTTTTGGAAACAGTCA +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLRLSLC*LFWKQS
Trigger: TGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCCG...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTTTTCCAGCCAAGGCTaGTGTCTTGCCTGGTTAACT +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNFSSQG*CLAWLT
Trigger: AGTTAACCAGGCAAGACACAAGCCTTGGCTGGAAAA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACAACAATGAAGTCAGCTaGAAGTCTCCAGCCACTGGA +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNNNEVS*KSPATG
Trigger: TCCAGTGGCTGGAGACTTCAAGCTGACTTCATTGTT...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAAGGAGAGAGAGAGGACTCGTGCATTGGGGAAGGTTGGGCCTGGGTGACTGTCGCCTCCAGCCTTTACTaGCTATTACAATGTTATTTT +
Preference number: 5 (lower is better)
Translates to: QGEREDSCIGEGWAWVTVASSLY*LLQCYF
Trigger: AAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGC...GACAGTCACCCAGGCCCAACCTTCCCCAATGCACGAGTCCTCTCTCTCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCACAGTCACACCTCAGTaGCTTTTCAGAAACATGCCT +
Preference number: 5 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTTVTPQ*LFRNMP
Trigger: AGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGT...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp CTGCTGAAGGCCTCTTCTAGCTTCTCTAATTCAGCCATTCGTTTCTaGAGCCGCTCAATCTCAGATTTCAGCTCCCGGGTGAGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: LLKASSSFSNSAIRF*SRSISDFSSRVRFS
Trigger: AGAAAACCTCACCCGGGAGCTGAAATCTGAGATTGAGCGGCTTCAGAAACGAATGGCTGAATTAGAGAAGCTAGAAGAGGCCTTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS TCA 90 bp TGGGAGAAGAAACCTGCCTGTTGCTCAGAGAATAGTTTTCATTGTTaGGAGCAAACTCCCTGTTCCGGAGTCGTTCCCGCTTATGCTGAG +
Preference number: 5 (lower is better)
Translates to: WEKKPACCSENSFHC*EQTPCSGVVPAYAE
Trigger: CTCAGCATAAGCGGGAACGACTCCGGAACAGGGAGTTTGCTCTCAACAATGAAAACTATTCTCTGAGCAACAGGCAGGTTTCTTCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 90 bp CTGTACTCACCCCCATGTGAGAAGCTTTTGCTGCCCTCCTGTTGGTaGAACTGGGAGAAGAAACCTGCCTGTTGCTCAGAGAATAGTTTT +
Preference number: 5 (lower is better)
Translates to: LYSPPCEKLLLPSCW*NWEKKPACCSENSF
Trigger: AAAACTATTCTCTGAGCAACAGGCAGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp GGTAGTCCAGACCACCCTTCCTTCTTGATTCTTTGGACGGCAGTGTaGAAGAGATGCCATCCTCAATCCGTAGGTCATTTCTTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: GSPDHPSFLILWTAV*KRCHPQSVGHFFPD
Trigger: ATCTGGAAAGAAATGACCTACGGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTCTGGACTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 90 bp CTTGGCTTCTACAGCTATAAGGATACTTCGATAGAACAGGAGCCTTaGAATTCGGGCAACTGTTATCAGCCTCAAGGCCATTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: LGFYSYKDTSIEQEP*NSGNCYQPQGHWQP
Trigger: AGGCTGCCAATGGCCTTGAGGCTGATAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTATCGAAGTATCCTTATAGCTGTAGAAGCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp TATCTTCCCTTGTTTGGGGGCCAGAATGGTCCAACTACTTGGTGGACAGGGACACTTTCTGGAGGTTTTTaGTGGCTTCCTCCAACTCAT +
Preference number: 5 (lower is better)
Translates to: YLPLFGGQNGPTTWWTGTLSGGF*WLPPTH
Trigger: ATGAGTTGGAGGAAGCCACAAAAAACCTCCAGAAAG...TGTCCCTGTCCACCAAGTAGTTGGACCATTCTGGCCCCCAAACAAGGGAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TTTAGGCATGGCTTGGCGCCCTTCTGTTTCCATCAGCAGAGAAGAGCCACAGACTCTAGTTCTTTCACTTaGACTCTGAGCATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: FRHGLAPFCFHQQRRATDSSSFT*TLSISS
Trigger: GCTGGAAATGCTCAGAGTCAAAGTGAAAGAACTAGA...GTCTGTGGCTCTTCTCTGCTGATGGAAACAGAAGGGCGCCAAGCCATGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTACTTGTCACTTTGTTaGGCCCTGGTTTGGAGACGG +
Preference number: 5 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCYLSLC*ALVWRR
Trigger: CCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTA...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp ACATTAACCACACAGACAGAGGCTGCCCTAGGATCCAGAAACAACCCACCAAGGCCTATGCTTGCTGTTTaGGAAACAGTCACTCACTCT +
Preference number: 5 (lower is better)
Translates to: TLTTQTEAALGSRNNPPRPMLAV*ETVTHS
Trigger: AGAGTGAGTGACTGTTTCCAAAACAGCAAGCATAGG...CCTTGGTGGGTTGTTTCTGGATCCTAGGGCAGCCTCTGTCTGTGTGGTTAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTTTATCTTCCCTTGTTaGGGGGCCAGAATGGTCCAA +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLFIFPC*GARMVQ
Trigger: TTGGACCATTCTGGCCCCCAAACAAGGGAAGATAAA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTACCTCTGGAGGAAGTCTaGAGTCTTCCTCTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILPLEEV*SLPLAR
Trigger: CCTGGCAAGAGGAAGACTCAAGACTTCCTCCAGAGG...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGGATCAGTTCATTTCCTaGCTCTTTTCAGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQDQFIS*LFSASR
Trigger: CCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATC...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 90 bp TGTGGGCTCCTAGAGGCATCCAATTCCACTCAAGGGGATGAGAAATaGTTACCTTTCTCTTGGCAACCACAATCTTCTTTGACAGCTGGA +
Preference number: 5 (lower is better)
Translates to: CGLLEASNSTQGDEK*LPFSWQPQSSLTAG
Trigger: TCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATTTCTCATCCCCTTGAGTGGAATTGGATGCCTCTAGGAGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTCAGAGGAGATTTTCTaGGTCAGATTTCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNSEEIF*VRFLSS
Trigger: TGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ATGGGTACACAGGGCTGCATTCATTACAGAGGCTCTCAGAGCAGGGAGGATCAGCTTCTTTATGTGAGGTaGAAAATCCCTGAAGGATGT +
Preference number: 5 (lower is better)
Translates to: MGTQGCIHYRGSQSREDQLLYVR*KIPEGC
Trigger: ACATCCTTCAGGGATTTTCAACCTCACATAAAGAAG...CTGATCCTCCCTGCTCTGAGAGCCTCTGTAATGAATGCAGCCCTGTGTACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCGTTGTATTTACCAACTaGGCAGTAACAAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTVVFTN*AVTRDA
Trigger: AGCATCTCTTGTTACTGCCAAGTTGGTAAATACAAC...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp GGGAGGATCAGTTCATTTCCTTGCTCTTTTCAGCTTCTAGGTGTGGGAAGGCTCTCAACAATAACAGGTTaGATGATGGCTCTAGACCGC +
Preference number: 5 (lower is better)
Translates to: GRISSFPCSFQLLGVGRLSTITG*MMALDR
Trigger: GCGGTCTAGAGCCATCATCAAACCTGTTATTGTTGA...GAGCCTTCCCACACCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTACAGGATCCGATGGCTaGATTATAATGCTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDATGSDG*IIMLLR
Trigger: TCGGAGCAGCATTATAATCAAGCCATCGGATCCTGT...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACACAGTGAGGCTACTTaGGGTCCTTCTGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPHSEAT*GPSGGG
Trigger: CCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGTGCATTGGGGAAGGTaGGGCCTGGGTGACTGTCCA +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPVHWGR*GLGDCP
Trigger: TGGACAGTCACCCAGGCCCAACCTTCCCCAATGCAC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTAGCCTTGCCAGCCATTaGAAGCCCAGAGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSSLASH*KPRETA
Trigger: GGCTGTTTCTCTGGGCTTCAAATGGCTGGCAAGGCT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAATAAAAGTGGGTTTGTaGACCGGGGGCAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILIKVGL*TGGSGT
Trigger: AGTCCCACTGCCCCCGGTCAACAAACCCACTTTTAT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp CATTCAGGCTCAGACACAGCTGGGTACAGTCATTCTTACTCCTGCTaGAGGCCTCTTCTAGCTTCTCTAATTCAGCCATTCGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: HSGSDTAGYSHSYSC*RPLLASLIQPFVSE
Trigger: TTCAGAAACGAATGGCTGAATTAGAGAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATGACTGTACCCAGCTGTGTCTGAGCCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 90 bp ATTTTCTTGGTCAGATTTCTCTCCTCATTCAGGCTCAGACACAGCTaGGTACAGTCATTCTTACTCCTGCTGAAGGCCTCTTCTAGCTTC +
Preference number: 5 (lower is better)
Translates to: IFLVRFLSSFRLRHS*VQSFLLLLKASSSF
Trigger: GAAGCTAGAAGAGGCCTTCAGCAGGAGTAAGAATGACTGTACCCAGCTGTGTCTGAGCCTGAATGAGGAGAGAAATCTGACCAAGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 90 bp TCGGGTTTTAGCCTTTTCTCTAGAGTTAGGCTGTGGTTTGGGCTCTaGCTCTGGAGTGATGGTTGTATTTACCAACTTGGCAGTAACAAG +
Preference number: 5 (lower is better)
Translates to: SGFSLFSRVRLWFGL*LWSDGCIYQLGSNK
Trigger: CTTGTTACTGCCAAGTTGGTAAATACAACCATCACTCCAGAGCCAGAGCCCAAACCACAGCCTAACTCTAGAGAAAAGGCTAAAACCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATCCCGCGCTGTGTGCTaGGACACAGAAGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPSRAVC*DTEASL
Trigger: AAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGGA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp TCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGCCCTGCCCTCAGACGATAGAACAGGAGCCTaGGAATTCGGGCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: SGFIKAVMSYTEPALPSDDRTGA*EFGQLL
Trigger: TAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTATC...GTCTGAGGGCAGGGCTGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACGTTGTATTTACCAACTaGGCAGTAACAAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNVVFTN*AVTRDA
Trigger: AGCATCTCTTGTTACTGCCAAGTTGGTAAATACAAC...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTCAACAATAACAGGTTaGATGATGGCTCTAGACCGC +
Preference number: 5 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCSTITG*MMALDR
Trigger: GCGGTCTAGAGCCATCATCAAACCTGTTATTGTTGA...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTATTGTTTGGCCCTGGTTaGGAGACGGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILLFGPG*ETGFCF
Trigger: GAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAA...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCTCTTTCAAAGGCAGTaGTCTCTTGACCTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSLFQRQ*SLDLCG
Trigger: GCCGCAGAGGTCAAGAGACAACTGCCTTTGAAAGAG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAGGACTTTATCTTCCCTaGTTTGGGGGCCAGAATGGT +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILGLYLP*FGGQNG
Trigger: ACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCC...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGGGAAGAACCCACACGGATGATACCTTCCACAAGCAAAAATCATCCCATACTAAGCCGAGAAGAATTTTaGACTCCTGCTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: REEPTRMIPSTSKNHPILSREEF*TPAVCW
Trigger: CCAGCACACAGCAGGAGTCAAAAATTCTTCTCGGCT...TAGTATGGGATGATTTTTGCTTGTGGAAGGTATCATCCGTGTGGGTTCTTCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGCTCTATTGCCAGGTCCCCCAACTCACTAGGAACCCTCCAACAACCATACACCTACAAGCAAATCCTATaGCACTCAGATTTCAAGATG +
Preference number: 5 (lower is better)
Translates to: SSIARSPNSLGTLQQPYTYKQIL*HSDFKM
Trigger: CATCTTGAAATCTGAGTGCAATAGGATTTGCTTGTA...GGTGTATGGTTGTTGGAGGGTTCCTAGTGAGTTGGGGGACCTGGCAATAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCCTTGGTCCCATGCTaGGAGCTGCTGCACCTAGAC +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSLVPC*ELLHLD
Trigger: GTCTAGGTGCAGCAGCTCCAAGCATGGGACCAAGGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp CAGCACCATTGGTATCTGGGAGCTCCATGGTATTGGTGGAGGCTCTaGCAGATTTCACAGATTCATTCTCCATTCCAGCATCTTTATCAT +
Preference number: 5 (lower is better)
Translates to: QHHWYLGAPWYWWRL*QISQIHSPFQHLYH
Trigger: ATGATAAAGATGCTGGAATGGAGAATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp TTTAGCCTTTTCTCTAGAGTTAGGCTGTGGTTTGGGCTCTGGCTCTaGAGTGATGGTTGTATTTACCAACTTGGCAGTAACAAGAGATGC +
Preference number: 5 (lower is better)
Translates to: FSLFSRVRLWFGLWL*SDGCIYQLGSNKRC
Trigger: GCATCTCTTGTTACTGCCAAGTTGGTAAATACAACCATCACTCCAGAGCCAGAGCCCAAACCACAGCCTAACTCTAGAGAAAAGGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 90 bp GCTGCTGTCAGATGGATATATAGTAATGCTACTTGTCACTTTGTTTaGCCCTGGTTTGGAGACGGGTTTCTGTTTCTCCAACGTAGTCTC +
Preference number: 5 (lower is better)
Translates to: AAVRWIYSNATCHFV*PWFGDGFLFLQRSL
Trigger: GAGACTACGTTGGAGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTAGCATTACTATATATCCATCTGACAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTTCAGAGGAGATTTTCTaGGTCAGATTTCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDASEEIF*VRFLSS
Trigger: TGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGA...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp TCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTCTAGTTCTTTCACTTaGACTCTGAGCATTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSQVSHQKDTPRGFSRCCSSSFT*TLSISS
Trigger: GCTGGAAATGCTCAGAGTCAAAGTGAAAGAACTAGA...ACAGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCTCTCATGTCTGCCTTaGCTGGACAGGAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSLSCLP*LDRKAS
Trigger: AGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGAG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTTCCCGCGCTGTGTGCTaGGACACAGAAGCTTCACTT +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPSRAVC*DTEASL
Trigger: AAGTGAAGCTTCTGTGTCCAAGCACACAGCGCGGGA...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGGAGGTGTCAGAAGCCTaGTCAGCTCTACCCAATGGG +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMEVSEA*SALPNG
Trigger: CCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTC...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTAGCACGTGTCCCCTCTaGCCAAAGACAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPSTCPL*PKTVSE
Trigger: CTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGCT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTCCATTGGCAGCCTTTTaGCCTTTAGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSPLAAF*PLESPS
Trigger: AGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGG...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCTTCTTCCTCCATGCTaGCTGAGTGGTTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCLLPPC*LSGSRL
Trigger: CAGCCTGGAACCACTCAGCAAGCATGGAGGAAGAAG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AAAGATCCAGACTTTGGCACCAGGAGCTATAGCACCAGAATCCAGGGCTCCAACTACAAGCAAATCCTATaGCACTCAGATTTCAAGATG +
Preference number: 5 (lower is better)
Translates to: KDPDFGTRSYSTRIQGSNYKQIL*HSDFKM
Trigger: CATCTTGAAATCTGAGTGCAATAGGATTTGCTTGTA...GTTGGAGCCCTGGATTCTGGTGCTATAGCTCCTGGTGCCAAAGTCTGGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCCCAACTTTGGGATTaGAGAGCCAGCCTTGCCAGC +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSQLWD*RASLAS
Trigger: GCTGGCAAGGCTGGCTCTCAAATCCCAAAGTTGGGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTAACCAAGCAGCTCTATaGCCAGGTCCCCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPNQAAL*PGPPTH
Trigger: GTGAGTTGGGGGACCTGGCAATAGAGCTGCTTGGTT...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 90 bp GTCAGATGGATATATAGTAATGCTACTTGTCACTTTGTTTGGCCCTaGTTTGGAGACGGGTTTCTGTTTCTCCAACGTAGTCTCTGTTCC +
Preference number: 5 (lower is better)
Translates to: VRWIYSNATCHFVWP*FGDGFLFLQRSLCS
Trigger: GGAACAGAGACTACGTTGGAGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTAGCATTACTATATATCCATCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGACCACCCTTCCTTCTaGATTCTTTGGACGGCAGTG +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCDHPSF*ILWTAV
Trigger: CACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACTCTCATGTCTGCCTTaGCTGGACAGGAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLSCLP*LDRKAS
Trigger: AGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGAG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAAGCACGTGTCCCCTCTaGCCAAAGACAGTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLSTCPL*PKTVSE
Trigger: CTCTGAGACTGTCTTTGGCAAGAGGGGACACGTGCT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTGCAGCCTGAGTTACTaGACTTCCGTTGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCCSLSY*TSVAKH
Trigger: GTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTGCAGCCTGAGTTACTaGACTTCCGTTGCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMCSLSY*TSVAKH
Trigger: GTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATCATCACAGGTTTCTCATCAAAAAGACACTCCCAGGGGCTTCTCCAGATGCTGTTGTATTTACCAACTaGGCAGTAACAAGAGATGCT +
Preference number: 5 (lower is better)
Translates to: HHHRFLIKKTLPGASPDAVVFTN*AVTRDA
Trigger: AGCATCTCTTGTTACTGCCAAGTTGGTAAATACAAC...AGCATCTGGAGAAGCCCCTGGGAGTGTCTTTTTGATGAGAAACCTGTGATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTTTACCCCAGCACCATaGGTATCTGGGAGCTCCATG +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMFTPAP*VSGSSM
Trigger: CATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTGTTTGGCCCTGGTTaGGAGACGGGTTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLFGPG*ETGFCF
Trigger: GAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGGGGAGCTGACATGGTaGCTAACTGATGTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCGELTW*LTDVSS
Trigger: AGAGCTCACATCAGTTAGCAACCATGTCAGCTCCCC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCAGGGAGTTGTGCAGTaGCCTGTAGACACTGAGTGT +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCQGVVQ*PVDTEC
Trigger: ACACTCAGTGTCTACAGGCAACTGCACAACTCCCTG...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGAATGGTCCAACTACTaGGTGGACAGGGACAAGGAG +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCEWSNY*VDRDKE
Trigger: CTCCTTGTCCCTGTCCACCAAGTAGTTGGACCATTC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCACATGCCTCCCAACTTaGGGATTTGAGAGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCTCLPT*GFESQP
Trigger: AGGCTGGCTCTCAAATCCCAAAGTTGGGAGGCATGT...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGTCATAAAAGTGGGTTaGTTGACCGGGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLVIKVG*LTGGSG
Trigger: CCCACTGCCCCCGGTCAACAAACCCACTTTTATGAC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAGGTCTTCAGTTTTCTTaGTCTCCTGAGTCCCACTGT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPGLQFS*SPESHC
Trigger: ACAGTGGGACTCAGGAGACAAAGAAAACTGAAGACC...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCATTGGCAGCCTTTTaGCCTTTAGAGAGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMPLAAF*PLESPS
Trigger: AGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGTCTCTGCCACTGGATTaGATGACTCGACACCTCAAG +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMSLPLD*MTRHLK
Trigger: CTTGAGGTGTCGAGTCATCAAATCCAGTGGCAGAGA...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAAGCTGCAGCTGCTTCTaGTGCTTTTCATGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPSCSCF*CFSCCS
Trigger: AGAACAGCATGAAAAGCACAAGAAGCAGCTGCAGCT...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACAGGGAGTTGTGCAGTaGCCTGTAGACACTGAGTGT +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLQGVVQ*PVDTEC
Trigger: ACACTCAGTGTCTACAGGCAACTGCACAACTCCCTG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGGACTTTATCTTCCCTaGTTTGGGGGCCAGAATGGT +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPGLYLP*FGGQNG
Trigger: ACCATTCTGGCCCCCAAACAAGGGAAGATAAAGTCC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTGACAATGCCTTTAGATaGGCAAAACTCTGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSDNAFR*AKLWEA
Trigger: TGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGTC...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCTTTTTAGGCATGGCTaGGCGCCCTTCTGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPLFRHG*APFCFH
Trigger: ATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTTTTTAGGCATGGCTaGGCGCCCTTCTGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMLFRHG*APFCFH
Trigger: ATGGAAACAGAAGGGCGCCAAGCCATGCCTAAAAAG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAATAAAAGTGGGTTTGTaGACCGGGGGCAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLIKVGL*TGGSGT
Trigger: AGTCCCACTGCCCCCGGTCAACAAACCCACTTTTAT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCGTGGTGGTGTACATTTaGGGAAGCGCACTACATAGG +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCVVVYI*GSALHR
Trigger: CCTATGTAGTGCGCTTCCCAAAATGTACACCACCAC...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGTGGTGGTGTACATTTaGGGAAGCGCACTACATAGG +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPVVVYI*GSALHR
Trigger: CCTATGTAGTGCGCTTCCCAAAATGTACACCACCAC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACTTTCTGGAGGTTTTTaGTGGCTTCCTCCAACTCAT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLSGGF*WLPPTH
Trigger: ATGAGTTGGAGGAAGCCACAAAAAACCTCCAGAAAG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTACTCTCATGTCTGCCTTaGCTGGACAGGAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLLSCLP*LDRKAS
Trigger: AGATGCTTTCCTGTCCAGCAAAGGCAGACATGAGAG...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTGATAGAACAGGAGCCTaGGAATTCGGGCAACTGTTA +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPDRTGA*EFGQLL
Trigger: TAACAGTTGCCCGAATTCCAAGGCTCCTGTTCTATC...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGACAGGATCCGATGGCTaGATTATAATGCTGCTCCGA +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMTGSDG*IIMLLR
Trigger: TCGGAGCAGCATTATAATCAAGCCATCGGATCCTGT...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp ACTATTATAGATGGTGAAAACAGGAGAACCTTAGAATACCAGATTTGGTGCCCTCTTGGAAATAGCATCTaGAGCATCAGAGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: TIIDGENRRTLEYQIWCPLGNSI*SIRGGD
Trigger: ATCCCCACCTCTGATGCTCAAGATGCTATTTCCAAG...AGGGCACCAAATCTGGTATTCTAAGGTTCTCCTGTTTTCACCATCTATAATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 90 bp GGGATGAGAAATGGTTACCTTTCTCTTGGCAACCACAATCTTCTTTaGCAGCTGGAGACCATCATCAATCATGTAGGTAATTCAAGCTTT +
Preference number: 5 (lower is better)
Translates to: GMRNGYLSLGNHNLL*QLETIINHVGNSSF
Trigger: AAAGCTTGAATTACCTACATGATTGATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATTTCTCATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS GCA 90 bp CTCAGAGTTAATGATTTCAGCTTTTCTAACTCTGACGCTAAACTCTaGTCAGTTTTATCCAGGCGGTCCTCAGAAGATTCTAGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LRVNDFSFSNSDAKL*SVLSRRSSEDSSSF
Trigger: GAAAGAACTAGAATCTTCTGAGGACCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGAGTTAGAAAAGCTGAAATCATTAACTCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS-3UTR CAA 90 bp TCTGCCTTTATTCCTGATTCCCTCCATGGGTATGTGCTAAAACTTCCCAATTCTATGGTTACCTTTCTCTaGGCAACCACAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SAFIPDSLHGYVLKLPNSMVTFL*ATTIFF
Trigger: AAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCAT...AGAATTGGGAAGTTTTAGCACATACCCATGGAGGGAATCAGGAATAAAGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCATTAATTTCCTCGTCTTaGCCTTCAATTCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLISSS*PSILST
Trigger: GGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAA...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CAGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCCTATGCTTGCTGTTTaGGAAACAGTCACTCACTCT +
Preference number: 5 (lower is better)
Translates to: QRNSLQPLLAITMLFSAMPMLAV*ETVTHS
Trigger: AGAGTGAGTGACTGTTTCCAAAACAGCAAGCATAGG...CATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp AGAGAAACAGCCTCCAGCCTTTACTTGCTATTACAATGTTATTTTCTGCAATGCTTTGAACTCTCAAGGTaGCCAACCAGTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: RETASSLYLLLQCYFLQCFELSR*PTSEGE
Trigger: TTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAAA...GCATTGCAGAAAATAACATTGTAATAGCAAGTAAAGGCTGGAGGCTGTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCACTTCTTTATGTGAGGTaGAAAATCCCTGAAGGATGT +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPLLYVR*KIPEGC
Trigger: ACATCCTTCAGGGATTTTCAACCTCACATAAAGAAG...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGACAATGCCTTTAGATaGGCAAAACTCTGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLDNAFR*AKLWEA
Trigger: TGCTTCCCAGAGTTTTGCCAATCTAAAGGCATTGTC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTATTTGAACTCTCAAGGTaGCCAACCAGTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLFELSR*PTSEGE
Trigger: TTCTCCTTCACTGGTTGGCAACCTTGAGAGTTCAAA...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAACAGTCACACCTCAGTaGCTTTTCAGAAACATGCCT +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLTVTPQ*LFRNMP
Trigger: AGGCATGTTTCTGAAAAGCAACTGAGGTGTGACTGT...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CATAAGGCAGGTGGTTCTGGATTTATCAAAGCTGTAATGAGCTATACTGAACCAAAGTGTCACTTGGAATaGGGTATACGCTTATCTAAA +
Preference number: 5 (lower is better)
Translates to: HKAGGSGFIKAVMSYTEPKCHLE*GIRLSK
Trigger: TTTAGATAAGCGTATACCCAATTCCAAGTGACACTT...TGGTTCAGTATAGCTCATTACAGCTTTGATAAATCCAGAACCACCTGCCTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGATCAGTTCATTTCCTaGCTCTTTTCAGCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLDQFIS*LFSASR
Trigger: CCTAGAAGCTGAAAAGAGCAAGGAAATGAACTGATC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS-3UTR CAA 90 bp CCAAGAATATACAATTCTTTTCAACTTCCCCATGTGACTGGTATAAGGAACCTAGCAATAACAGTTTATTaGAGGGCTACTTTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: PRIYNSFQLPHVTGIRNLAITVY*RATFLA
Trigger: GGCTAAGAAAGTAGCCCTCAAATAAACTGTTATTGC...TAGGTTCCTTATACCAGTCACATGGGGAAGTTGAAAAGAATTGTATATTCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 72 bp TTCCGCCGCTCAGCTGCCAGCGACCGGCGCCTCCTCTaGCTCCGCGGGACTGACAATGAGGGGCGGGGCCAA +
Preference number: 6 (lower is better)
Translates to: FRRSAASDRRLL*LRGTDNEGRGQ
Trigger: TTGGCCCCGCCCCTCATTGTCAGTCCCGCGGAGCCAGAGGAGGCGCCGGTCGCTGGCAGCTGAGCGGCGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS CAA 72 bp CCCAGCGGGCTCAGTTCTCCTCAGCACAGGGCCTGGTaGGCCGTAATCGTTCCTCGGCCCGTACTCGCCCAG +
Preference number: 6 (lower is better)
Translates to: PSGLSSPQHRAW*AVIVPRPVLAQ
Trigger: CTGGGCGAGTACGGGCCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGGAGAACTGAGCCCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CCA 72 bp ACACCCAGCGGGCTCAGTTCTCCTCAGCACAGGGCCTaGTTGGCCGTAATCGTTCCTCGGCCCGTACTCGCC +
Preference number: 6 (lower is better)
Translates to: TPSGLSSPQHRA*LAVIVPRPVLA
Trigger: GGCGAGTACGGGCCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGGAGAACTGAGCCCGCTGGGTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS CAA 90 bp CAACAGACACCCAGCGGGCTCAGTTCTCCTCAGCACAGGGCCTGGTaGGCCGTAATCGTTCCTCGGCCCGTACTCGCCCAGACTCTGGCA +
Preference number: 6 (lower is better)
Translates to: QQTPSGLSSPQHRAW*AVIVPRPVLAQTLA
Trigger: TGCCAGAGTCTGGGCGAGTACGGGCCGAGGAACGATTACGGCCAACCAGGCCCTGTGCTGAGGAGAACTGAGCCCGCTGGGTGTCTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS TCA 72 bp GCGCCAGTGAGCCATGAATCCGGCTGCGGCACTTCATaGAATACTCATGGGCCGACTGCACCAGGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: APVSHESGCGTS*NTHGPTAPGLR
Trigger: CCGCAAGCCTGGTGCAGTCGGCCCATGAGTATTTCATGAAGTGCCGCAGCCGGATTCATGGCTCACTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS CCA 72 bp CGACGGGTAAGCACCTCTGACACAGTGAGGCTACTTTaGGTCCTTCTGGAGGAGGGCTCAGGGGCATCCCCT +
Preference number: 6 (lower is better)
Translates to: RRVSTSDTVRLL*VLLEEGSGASP
Trigger: AGGGGATGCCCCTGAGCCCTCCTCCAGAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp TTGGGTCCTTCTGGAGGAGGGCTCAGGGGCATCCCCTaGACTTGGTCCTACCCTTCGAGTGCCCTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: LGPSGGGLRGIP*TWSYPSSALLK
Trigger: TTTGAGCAGGGCACTCGAAGGGTAGGACCAAGTTCAGGGGATGCCCCTGAGCCCTCCTCCAGAAGGACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp AGGCACACAATACTCAGGTTTATTCAATGTCCCCTCTaGGGCCCCGAACCGCGCTCCCGCCAGCGAAGGGTT +
Preference number: 6 (lower is better)
Translates to: RHTILRFIQCPL*GPEPRSRQRRV
Trigger: AACCCTTCGCTGGCGGGAGCGCGGTTCGGGGCCGCAGAGGGGACATTGAATAAACCTGAGTATTGTGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471849.5
CDS CAA 90 bp ACATGGTTGCTAACTGATGTGAGCTCTGCCAGCCCCACCTGGATATaGCTAGTGGATGTGTGCCTCTCCCTCAGGGCCTCACCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: TWLLTDVSSASPTWI*LVDVCLSLRASPGA
Trigger: TGCTCCGGGTGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAATATCCAGGTGGGGCTGGCAGAGCTCACATCAGTTAGCAACCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp GCAAACTCCCTGTTCCGGAGTCGTTCCCGCTTATGCTaGGGAGACAGTTCCCGCGCTGTGTGCTTGGACACA +
Preference number: 6 (lower is better)
Translates to: ANSLFRSRSRLC*GDSSRAVCLDT
Trigger: TGTGTCCAAGCACACAGCGCGGGAACTGTCTCCTCAGCATAAGCGGGAACGACTCCGGAACAGGGAGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp CCACTTTTCCCTTCAGTCCGCTCTCGGTGCCTGGCTTaGAAGTCCCCTTCCACGCTTTACTGTGCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: PLFPSVRSRCLA*KSPSTLYCAPE
Trigger: CTCAGGAGCACAGTAAAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp GGTGTCTCCTACCCGATTCCGACGGGTAAGCACCTCTaGCACAGTGAGGCTACTTTGGGTCCTTCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: GVSYPIPTGKHL*HSEATLGPSGG
Trigger: TCCTCCAGAAGGACCCAAAGTAGCCTCACTGTGTCAGAGGTGCTTACCCGTCGGAATCGGGTAGGAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp TTGACAGGACTCAGCCTCTCTCCCCTCCTGCGCCAGTaGGCCATGAATCCGGCTGCGGCACTTCATGAAATA +
Preference number: 6 (lower is better)
Translates to: LTGLSLSPLLRQ*AMNPAAALHEI
Trigger: TATTTCATGAAGTGCCGCAGCCGGATTCATGGCTCACTGGCGCAGGAGGGGAGAGAGGCTGAGTCCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302291.8
CDS GCA 72 bp GCACCCGCTGGCGCAGCACTTCAATCTCCGCCAACATaGTGGAGTTGCTACCTTCTGCCTGAATCACCTTGT +
Preference number: 6 (lower is better)
Translates to: APAGAALQSPPT*WSCYLLPESPC
Trigger: ACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAGCGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 72 bp GCATCCCCTGAACTTGGTCCTACCCTTCGAGTGCCCTaGTCAAAAAGGCAGGACCTGGGCTGTTCGAGTTCT +
Preference number: 6 (lower is better)
Translates to: ASPELGPTLRVP*SKRQDLGCSSS
Trigger: AGAACTCGAACAGCCCAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAGGACCAAGTTCAGGGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp CCCGCTGGCGCAGCACTTCAATCTCCGCCAACATGCTaGAGTTGCTACCTTCTGCCTGAATCACCTTGTCCT +
Preference number: 6 (lower is better)
Translates to: PAGAALQSPPTC*SCYLLPESPCP
Trigger: AGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCCAGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 72 bp CTTCTCCACTTTTCCCTTCAGTCCGCTCTCGGTGCCTaGCTTGGAAGTCCCCTTCCACGCTTTACTGTGCTC +
Preference number: 6 (lower is better)
Translates to: LLHFSLQSALGA*LGSPLPRFTVL
Trigger: GAGCACAGTAAAGCGTGGAAGGGGACTTCCAAGCCAGGCACCGAGAGCGGACTGAAGGGAAAAGTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp CTAACTGATGTGAGCTCTGCCAGCCCCACCTGGATATaGCTAGTGGATGTGTGCCTCTCCCTCAGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: LTDVSSASPTWI*LVDVCLSLRAS
Trigger: TGAGGCCCTGAGGGAGAGGCACACATCCACTAGCAATATCCAGGTGGGGCTGGCAGAGCTCACATCAGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp CCCAGCACTCTGGAAGGCCGAGGCGAGTGGATGACTTaGAGTCAGGAGTTTGAGAACAGCCTGGCCAAAATG +
Preference number: 6 (lower is better)
Translates to: PSTLEGRGEWMT*SQEFENSLAKM
Trigger: CATTTTGGCCAGGCTGTTCTCAAACTCCTGACTTCAAGTCATCCACTCGCCTCGGCCTTCCAGAGTGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475164.2
CDS GCA 72 bp GGCCAGGGCTCCAATGGCCTTAGAACAGCCAGAGTTTaGAGCCTGAGTTACTTGACTTCCGTTGCCAAGCAC +
Preference number: 6 (lower is better)
Translates to: GQGSNGLRTARV*SLSYLTSVAKH
Trigger: GTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCTAAGGCCATTGGAGCCCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp AGGGGCACTATGGCTTTTCCACCTGATTGTCTCCGCTaGAGGTGCATGGCTATTCCTCTCCACAGGATCCGA +
Preference number: 6 (lower is better)
Translates to: RGTMAFPPDCLR*RCMAIPLHRIR
Trigger: TCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp CTGGCATCTGAGAAGCCCACTTCTGAAGGGGCACTATaGCTTTTCCACCTGATTGTCTCCGCTGGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: LASEKPTSEGAL*LFHLIVSAGGA
Trigger: TGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGTGCCCCTTCAGAAGTGGGCTTCTCAGATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp CTACCCTTCGAGTGCCCTGCTCAAAAAGGCAGGACCTaGGCTGTTCGAGTTCTGAGAAGTCTGTGGAAGACC +
Preference number: 6 (lower is better)
Translates to: LPFECPAQKGRT*AVRVLRSLWKT
Trigger: GGTCTTCCACAGACTTCTCAGAACTCGAACAGCCCAGGTCCTGCCTTTTTGAGCAGGGCACTCGAAGGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp GGGAGGAGCCGGGTACAAACCGGTCTTCAGTTTTCTTaGTCTCCTGAGTCCCACTGTCTGTACTCACCCCCA +
Preference number: 6 (lower is better)
Translates to: GRSRVQTGLQFS*SPESHCLYSPP
Trigger: TGGGGGTGAGTACAGACAGTGGGACTCAGGAGACAAAGAAAACTGAAGACCGGTTTGTACCCGGCTCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp GGCCTTAGAACAGCCAGAGTTTGCAGCCTGAGTTACTaGACTTCCGTTGCCAAGCACGTGTCCCCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: GLRTARVCSLSY*TSVAKHVSPLA
Trigger: GGCAAGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCTAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp CTTCGCTCTGGGAGGAGCCGGGTACAAACCGGTCTTCAGTTTTCTTaGTCTCCTGAGTCCCACTGTCTGTACTCACCCCCATGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: LRSGRSRVQTGLQFS*SPESHCLYSPPCEK
Trigger: CTTCTCACATGGGGGTGAGTACAGACAGTGGGACTCAGGAGACAAAGAAAACTGAAGACCGGTTTGTACCCGGCTCCTCCCAGAGCGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp TGTCCCCTCTTGCCAAAGACAGTCTCAGAGGAGGTGTCAGAAGCCTaGTCAGCTCTACCCAATGGGTCACTGGGAACAGATCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: CPLLPKTVSEEVSEA*SALPNGSLGTDPWV
Trigger: CACCCATGGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTCCTCTGAGACTGTCTTTGGCAAGAGGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp TCCGCTGGAGGTGCATGGCTATTCCTCTCCACAGGATCCGATGGCTaGATTATAATGCTGCTCCGAGAGACCACTGTTTCTGGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SAGGAWLFLSTGSDG*IIMLLRETTVSGLS
Trigger: GGACAGGCCAGAAACAGTGGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp GGCGCAGCACTTCAATCTCCGCCAACATGCTGGAGTTaGTACCTTCTGCCTGAATCACCTTGTCCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: GAALQSPPTCWS*YLLPESPCPGD
Trigger: ATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAAGTGCTGCGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 72 bp GTCCTTCAGGGGCCCATCTGCCATTCTCTCCGCTTCTaGAAGCTGCAGGGTGATGTCATGTTTGTGAATGGA +
Preference number: 6 (lower is better)
Translates to: VLQGPICHSLRF*KLQGDVMFVNG
Trigger: TCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATGGCAGATGGGCCCCTGAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp GGGCCTTTGGCTTTTTACCCCAGCACCATTGGTATCTaGGAGCTCCATGGTATTGGTGGAGGCTCTGACAGA +
Preference number: 6 (lower is better)
Translates to: GPLAFYPSTIGI*ELHGIGGGSDR
Trigger: TCTGTCAGAGCCTCCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAAAAGCCAAAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp GGGCTAAAGGGCCTTTGGCTTTTTACCCCAGCACCATaGGTATCTGGGAGCTCCATGGTATTGGTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: GLKGLWLFTPAP*VSGSSMVLVEA
Trigger: AGCCTCCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAAAAGCCAAAGGCCCTTTAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp GGCTCCAATGGCCTTAGAACAGCCAGAGTTTGCAGCCTGAGTTACTaGACTTCCGTTGCCAAGCACGTGTCCCCTCTTGCCAAAGACAGT +
Preference number: 6 (lower is better)
Translates to: GSNGLRTARVCSLSY*TSVAKHVSPLAKDS
Trigger: ACTGTCTTTGGCAAGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCAAACTCTGGCTGTTCTAAGGCCATTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp ACGGATCCAGGGAGTTGTGCAGTTGCCTGTAGACACTaGGTGTACAGTCTTCCCCTTCTTCCTCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: TDPGSCAVACRH*VYSLPLLPPCL
Trigger: CAAGCATGGAGGAAGAAGGGGAAGACTGTACACTCAGTGTCTACAGGCAACTGCACAACTCCCTGGATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302291.8
ENST00000418342.5
CDS GCA 72 bp CCCACTGTCTGTACTCACCCCCATGTGAGAAGCTTTTaGTGCCCTCCTGTTGGTGAAACTGGGAGAAGAAAC +
Preference number: 6 (lower is better)
Translates to: PTVCTHPHVRSF*CPPVGETGRRN
Trigger: GTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAGACAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp AGCCAGAGTTTGCAGCCTGAGTTACTTGACTTCCGTTaGCAAGCACGTGTCCCCTCTTGCCAAAGACAGTCT +
Preference number: 6 (lower is better)
Translates to: SQSLQPELLDFR*QARVPSCQRQS
Trigger: AGACTGTCTTTGGCAAGAGGGGACACGTGCTTGGCAACGGAAGTCAAGTAACTCAGGCTGCAAACTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp CCACTGGATTTGATGACTCGACACCTCAAGGCTTCATaGGGACTGCTGTCTTCCATCACAACTGCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: PLDLMTRHLKAS*GLLSSITTAAG
Trigger: ACCTGCAGCAGTTGTGATGGAAGACAGCAGTCCGCATGAAGCCTTGAGGTGTCGAGTCATCAAATCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp ACTATGGCTTTTCCACCTGATTGTCTCCGCTGGAGGTaGATGGCTATTCCTCTCCACAGGATCCGATGGCTT +
Preference number: 6 (lower is better)
Translates to: TMAFPPDCLRWR*MAIPLHRIRWL
Trigger: AAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp ACCTTTCTCTTGGCAACCACAATCTTCTTTGACAGCTaGAGACCATCATCAATCTCTGCGGCCCCGAACCGC +
Preference number: 6 (lower is better)
Translates to: TFLLATTIFFDS*RPSSISAAPNR
Trigger: GCGGTTCGGGGCCGCAGAGATTGATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS CCA 72 bp GCTTGTAAATTCGGCCATGTCTACTGCCAGCCAATGTaGGCTCCTAGAGGCATCCAATTCCACTCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: ACKFGHVYCQPM*APRGIQFHSRG
Trigger: TCCCCTTGAGTGGAATTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAATTTACAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CCA 72 bp CGCGCTGTGTGCTTGGACACAGAAGCTTCACTTCCGTaGCCTCTAAACTTAGTCCTCTCATGTCTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: RAVCLDTEASLP*PLNLVLSCLPL
Trigger: CAAAGGCAGACATGAGAGGACTAAGTTTAGAGGCCACGGAAGTGAAGCTTCTGTGTCCAAGCACACAGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp TGGCTTTTCCACCTGATTGTCTCCGCTGGAGGTGCATaGCTATTCCTCTCCACAGGATCCGATGGCTTGATT +
Preference number: 6 (lower is better)
Translates to: WLFHLIVSAGGA*LFLSTGSDGLI
Trigger: AATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCAGCGGAGACAATCAGGTGGAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp CGACACAGATCCTCTGCTCTCTTAATTTCCTCGTCTTaGCCTTCAATTCTCAGCACCCGCTGGCGCAGCACT +
Preference number: 6 (lower is better)
Translates to: RHRSSALLISSS*PSILSTRWRST
Trigger: AGTGCTGCGCCAGCGGGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 90 bp GAATTCGGGCAACTGTTATCAGCCTCAAGGCCATTGGCAGCCTTTTaGCCTTTAGAGAGCCCTTCTGAGGAGGATCTTCGAGATGAGGCC +
Preference number: 6 (lower is better)
Translates to: EFGQLLSASRPLAAF*PLESPSEEDLRDEA
Trigger: GGCCTCATCTCGAAGATCCTCCTCAGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGGCCTTGAGGCTGATAACAGTTGCCCGAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp ACAGGAGCCTTGGAATTCGGGCAACTGTTATCAGCCTCAAGGCCATaGGCAGCCTTTTTGCCTTTAGAGAGCCCTTCTGAGGAGGATCTT +
Preference number: 6 (lower is better)
Translates to: TGALEFGQLLSASRP*AAFLPLESPSEEDL
Trigger: AAGATCCTCCTCAGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGGCCTTGAGGCTGATAACAGTTGCCCGAATTCCAAGGCTCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp TCCGCTTCTGCAAGCTGCAGGGTGATGTCATGTTTGTaGATGGAGAGCTCAAAAGGGGAGCTGACATGGTTG +
Preference number: 6 (lower is better)
Translates to: SASASCRVMSCL*MESSKGELTWL
Trigger: CAACCATGTCAGCTCCCCTTTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp CATCTGCCATTCTCTCCGCTTCTGCAAGCTGCAGGGTaGTGTCATGTTTGTGAATGGAGAGCTCAAAAGGGG +
Preference number: 6 (lower is better)
Translates to: HLPFSPLLQAAG*CHVCEWRAQKG
Trigger: CCCCTTTTGAGCTCTCCATTCACAAACATGACATCACCCTGCAGCTTGCAGAAGCGGAGAGAATGGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp CGTCTCCTTGTAGCTTGTAAATTCGGCCATGTCTACTaGCAGCCAATGTGGGCTCCTAGAGGCATCCAATTC +
Preference number: 6 (lower is better)
Translates to: RLLVACKFGHVY*QPMWAPRGIQF
Trigger: GAATTGGATGCCTCTAGGAGCCCACATTGGCTGGCAGTAGACATGGCCGAATTTACAAGCTACAAGGAGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS GCA 72 bp TTCAATCTCCGCCAACATGCTGGAGTTGCTACCTTCTaGCTGAATCACCTTGTCCTGGAGATCCAGGAGTTC +
Preference number: 6 (lower is better)
Translates to: FNLRQHAGVATF*LNHLVLEIQEF
Trigger: GAACTCCTGGATCTCCAGGACAAGGTGATTCAGGCAGAAGGTAGCAACTCCAGCATGTTGGCGGAGATTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 72 bp ACTGTCTGTACTCACCCCCATGTGAGAAGCTTTTGCTaGCCTCCTGTTGGTGAAACTGGGAGAAGAAACCTG +
Preference number: 6 (lower is better)
Translates to: TVCTHPHVRSFC*PPVGETGRRNL
Trigger: CAGGTTTCTTCTCCCAGTTTCACCAACAGGAGGGCAGCAAAAGCTTCTCACATGGGGGTGAGTACAGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp TCAGCTCTACCCAATGGGTCACTGGGAACAGATCCATaGGTGGTGTCACTAAACGTTCGTGTTGTCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SALPNGSLGTDP*VVSLNVRVVFS
Trigger: GGAGAAGACAACACGAACGTTTAGTGACACCACCCATGGATCTGTTCCCAGTGACCCATTGGGTAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CCA 72 bp TGGAGGTGCATGGCTATTCCTCTCCACAGGATCCGATaGCTTGATTATAATGCTGCTCCGAGAGACCACTGT +
Preference number: 6 (lower is better)
Translates to: WRCMAIPLHRIR*LDYNAAPRDHC
Trigger: ACAGTGGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACCTCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp TTGCCAAAGACAGTCTCAGAGGAGGTGTCAGAAGCCTaGTCAGCTCTACCCAATGGGTCACTGGGAACAGAT +
Preference number: 6 (lower is better)
Translates to: LPKTVSEEVSEA*SALPNGSLGTD
Trigger: ATCTGTTCCCAGTGACCCATTGGGTAGAGCTGACAAGGCTTCTGACACCTCCTCTGAGACTGTCTTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp TTCATCAGACGACACAGATCCTCTGCTCTCTTAATTTCCTCGTCTTaGCCTTCAATTCTCAGCACCCGCTGGCGCAGCACTTCAATCTCC +
Preference number: 6 (lower is better)
Translates to: FIRRHRSSALLISSS*PSILSTRWRSTSIS
Trigger: GGAGATTGAAGTGCTGCGCCAGCGGGTGCTGAGAATTGAAGGCAAAGACGAGGAAATTAAGAGAGCAGAGGATCTGTGTCGTCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS TCA 72 bp GCCTCTTCTAGCTTCTCTAATTCAGCCATTCGTTTCTaGAGCCGCTCAATCTCAGATTTCAGCTCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: ASSSFSNSAIRF*SRSISDFSSRV
Trigger: CACCCGGGAGCTGAAATCTGAGATTGAGCGGCTTCAGAAACGAATGGCTGAATTAGAGAAGCTAGAAGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 72 bp GACCACCCTTCCTTCTTGATTCTTTGGACGGCAGTGTaGAAGAGATGCCATCCTCAATCCGTAGGTCATTTC +
Preference number: 6 (lower is better)
Translates to: DHPSFLILWTAV*KRCHPQSVGHF
Trigger: GAAATGACCTACGGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 72 bp CTACCTGCTTTAGGTAGTCCAGACCACCCTTCCTTCTaGATTCTTTGGACGGCAGTGTGGAAGAGATGCCAT +
Preference number: 6 (lower is better)
Translates to: LPALGSPDHPSF*ILWTAVWKRCH
Trigger: ATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTCTGGACTACCTAAAGCAGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 72 bp CAACTGTTATCAGCCTCAAGGCCATTGGCAGCCTTTTaGCCTTTAGAGAGCCCTTCTGAGGAGGATCTTCGA +
Preference number: 6 (lower is better)
Translates to: QLLSASRPLAAF*PLESPSEEDLR
Trigger: TCGAAGATCCTCCTCAGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGGCCTTGAGGCTGATAACAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp TTGGAATTCGGGCAACTGTTATCAGCCTCAAGGCCATaGGCAGCCTTTTTGCCTTTAGAGAGCCCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: LEFGQLLSASRP*AAFLPLESPSE
Trigger: CTCAGAAGGGCTCTCTAAAGGCAAAAAGGCTGCCAATGGCCTTGAGGCTGATAACAGTTGCCCGAATTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp ACCCCAGCACCATTGGTATCTGGGAGCTCCATGGTATaGGTGGAGGCTCTGACAGATTTCACAGATTCATTC +
Preference number: 6 (lower is better)
Translates to: TPAPLVSGSSMV*VEALTDFTDSF
Trigger: GAATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp GGTGCATGGCTATTCCTCTCCACAGGATCCGATGGCTaGATTATAATGCTGCTCCGAGAGACCACTGTTTCT +
Preference number: 6 (lower is better)
Translates to: GAWLFLSTGSDG*IIMLLRETTVS
Trigger: AGAAACAGTGGTCTCTCGGAGCAGCATTATAATCAAGCCATCGGATCCTGTGGAGAGGAATAGCCATGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp AATGGTTACCTTTCTCTTGGCAACCACAATCTTCTTTaGCAGCTGGAGACCATCATCAATCTCTGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: NGYLSLGNHNLL*QLETIINLCGP
Trigger: GGGGCCGCAGAGATTGATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314174.5
CDS TCA 72 bp AAACCTGCCTGTTGCTCAGAGAATAGTTTTCATTGTTaGGAGCAAACTCCCTGTTCCGGAGTCGTTCCCGCT +
Preference number: 6 (lower is better)
Translates to: KPACCSENSFHC*EQTPCSGVVPA
Trigger: AGCGGGAACGACTCCGGAACAGGGAGTTTGCTCTCAACAATGAAAACTATTCTCTGAGCAACAGGCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS GCA 72 bp CAAGCTTTCCGTCAATACTTCCGGCGGCTCTCCCTATaGTTGCTGTTTTGGAAACAGTCACTCACTCTCTTT +
Preference number: 6 (lower is better)
Translates to: QAFRQYFRRLSL*LLFWKQSLTLF
Trigger: AAAGAGAGTGAGTGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCCGCCGGAAGTATTGACGGAAAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CCA 72 bp AGCCTTTTCTCTAGAGTTAGGCTGTGGTTTGGGCTCTaGCTCTGGAGTGATGGTTGTATTTACCAACTTGGC +
Preference number: 6 (lower is better)
Translates to: SLFSRVRLWFGL*LWSDGCIYQLG
Trigger: GCCAAGTTGGTAAATACAACCATCACTCCAGAGCCAGAGCCCAAACCACAGCCTAACTCTAGAGAAAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 72 bp GCTTTCCGTCAATACTTCCGGCGGCTCTCCCTATGCTaGCTGTTTTGGAAACAGTCACTCACTCTCTTTCAA +
Preference number: 6 (lower is better)
Translates to: AFRQYFRRLSLC*LFWKQSLTLFQ
Trigger: TTGAAAGAGAGTGAGTGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCCGCCGGAAGTATTGACGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CAA 90 bp TTTCATTCTCTACCTGCTTTAGGTAGTCCAGACCACCCTTCCTTCTaGATTCTTTGGACGGCAGTGTGGAAGAGATGCCATCCTCAATCC +
Preference number: 6 (lower is better)
Translates to: FHSLPALGSPDHPSF*ILWTAVWKRCHPQS
Trigger: GGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGAAGGGTGGTCTGGACTACCTAAAGCAGGTAGAGAATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 90 bp TGGCTTTTTACCCCAGCACCATTGGTATCTGGGAGCTCCATGGTATaGGTGGAGGCTCTGACAGATTTCACAGATTCATTCTCCATTCCA +
Preference number: 6 (lower is better)
Translates to: WLFTPAPLVSGSSMV*VEALTDFTDSFSIP
Trigger: TGGAATGGAGAATGAATCTGTGAAATCTGTCAGAGCCTCCACCAATACCATGGAGCTCCCAGATACCAATGGTGCTGGGGTAAAAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp GTAATTCAAGCTTTCCGTCAATACTTCCGGCGGCTCTCCCTATGCTaGCTGTTTTGGAAACAGTCACTCACTCTCTTTCAAAGGCAGTTG +
Preference number: 6 (lower is better)
Translates to: VIQAFRQYFRRLSLC*LFWKQSLTLFQRQL
Trigger: CAACTGCCTTTGAAAGAGAGTGAGTGACTGTTTCCAAAACAGCAAGCATAGGGAGAGCCGCCGGAAGTATTGACGGAAAGCTTGAATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CCA 72 bp TTCTCTAGAGTTAGGCTGTGGTTTGGGCTCTGGCTCTaGAGTGATGGTTGTATTTACCAACTTGGCAGTAAC +
Preference number: 6 (lower is better)
Translates to: FSRVRLWFGLWL*SDGCIYQLGSN
Trigger: GTTACTGCCAAGTTGGTAAATACAACCATCACTCCAGAGCCAGAGCCCAAACCACAGCCTAACTCTAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp TCTTTCACTTTGACTCTGAGCATTTCCAGCTCAGAGGAGATTTTCTaGGTCAGATTTCTCTCCTCATTCAGGCTCAGACACAGCTGGGTA +
Preference number: 6 (lower is better)
Translates to: SFTLTLSISSSEEIF*VRFLSSFRLRHSWV
Trigger: TACCCAGCTGTGTCTGAGCCTGAATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGAGCTGGAAATGCTCAGAGTCAAAGTGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS GCA 72 bp TCCTTCTTGATTCTTTGGACGGCAGTGTGGAAGAGATaGCATCCTCAATCCGTAGGTCATTTCTTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: SFLILWTAVWKR*HPQSVGHFFPD
Trigger: ATCTGGAAAGAAATGACCTACGGATTGAGGATGGCATCTCTTCCACACTGCCGTCCAAAGAATCAAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 72 bp TCCACTCAAGGGGATGAGAAATGGTTACCTTTCTCTTaGCAACCACAATCTTCTTTGACAGCTGGAGACCAT +
Preference number: 6 (lower is better)
Translates to: STQGDEKWLPFS*QPQSSLTAGDH
Trigger: ATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATTTCTCATCCCCTTGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CAA 72 bp TTGACTCTGAGCATTTCCAGCTCAGAGGAGATTTTCTaGGTCAGATTTCTCTCCTCATTCAGGCTCAGACAC +
Preference number: 6 (lower is better)
Translates to: LTLSISSSEEIF*VRFLSSFRLRH
Trigger: GTGTCTGAGCCTGAATGAGGAGAGAAATCTGACCAAGAAAATCTCCTCTGAGCTGGAAATGCTCAGAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 72 bp TCCAGGCGGTCCTCAGAAGATTCTAGTTCTTTCACTTaGACTCTGAGCATTTCCAGCTCAGAGGAGATTTTC +
Preference number: 6 (lower is better)
Translates to: SRRSSEDSSSFT*TLSISSSEEIF
Trigger: GAAAATCTCCTCTGAGCTGGAAATGCTCAGAGTCAAAGTGAAAGAACTAGAATCTTCTGAGGACCGCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 72 bp CTAGAGGCATCCAATTCCACTCAAGGGGATGAGAAATaGTTACCTTTCTCTTGGCAACCACAATCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: LEASNSTQGDEK*LPFSWQPQSSL
Trigger: CAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATTTCTCATCCCCTTGAGTGGAATTGGATGCCTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2
CDS CAA 72 bp TTTTGGAAACAGTCACTCACTCTCTTTCAAAGGCAGTaGTCTCTTGACCTGATCTCATCTGATAGGTCGCAG +
Preference number: 6 (lower is better)
Translates to: FWKQSLTLFQRQ*SLDLISSDRSQ
Trigger: CTGCGACCTATCAGATGAGATCAGGTCAAGAGACAACTGCCTTTGAAAGAGAGTGAGTGACTGTTTCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000471849.5
ENST00000475164.2
CDS CAA 90 bp TCAGTTTTATCCAGGCGGTCCTCAGAAGATTCTAGTTCTTTCACTTaGACTCTGAGCATTTCCAGCTCAGAGGAGATTTTCTTGGTCAGA +
Preference number: 6 (lower is better)
Translates to: SVLSRRSSEDSSSFT*TLSISSSEEIFLVR
Trigger: TCTGACCAAGAAAATCTCCTCTGAGCTGGAAATGCTCAGAGTCAAAGTGAAAGAACTAGAATCTTCTGAGGACCGCCTGGATAAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CAA 90 bp GATGGATATATAGTAATGCTACTTGTCACTTTGTTTGGCCCTGGTTaGGAGACGGGTTTCTGTTTCTCCAACGTAGTCTCTGTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: DGYIVMLLVTLFGPG*ETGFCFSNVVSVPD
Trigger: ATCTGGAACAGAGACTACGTTGGAGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTAGCATTACTATATATCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS CAA 90 bp TGCTTGCTGTTTTGGAAACAGTCACTCACTCTCTTTCAAAGGCAGTaGTCTCTTGACCTGATCTCATCTGATAGGTCGCAGTCAAAATAC +
Preference number: 6 (lower is better)
Translates to: CLLFWKQSLTLFQRQ*SLDLISSDRSQSKY
Trigger: GTATTTTGACTGCGACCTATCAGATGAGATCAGGTCAAGAGACAACTGCCTTTGAAAGAGAGTGAGTGACTGTTTCCAAAACAGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471849.5
ENST00000475164.2
CDS GCA 72 bp AATGATTTCAGCTTTTCTAACTCTGACGCTAAACTCTaGTCAGTTTTATCCAGGCGGTCCTCAGAAGATTCT +
Preference number: 6 (lower is better)
Translates to: NDFSFSNSDAKL*SVLSRRSSEDS
Trigger: AGAATCTTCTGAGGACCGCCTGGATAAAACTGAGCAGAGTTTAGCGTCAGAGTTAGAAAAGCTGAAATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
ENST00000471849.5
CDS CCA 72 bp AGATGGATATATAGTAATGCTACTTGTCACTTTGTTTaGCCCTGGTTTGGAGACGGGTTTCTGTTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: RWIYSNATCHFV*PWFGDGFLFLQ
Trigger: TTGGAGAAACAGAAACCCGTCTCCAAACCAGGGCCAAACAAAGTGACAAGTAGCATTACTATATATCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302291.8
ENST00000314174.5
ENST00000418342.5
CDS TCA 72 bp AATGGTTACCTTTCTCTTGGCAACCACAATCTTCTTTaGCAGCTGGAGACCATCATCAATCATGTAGGTAAT +
Preference number: 6 (lower is better)
Translates to: NGYLSLGNHNLL*QLETIINHVGN
Trigger: ATTACCTACATGATTGATGATGGTCTCCAGCTGTCAAAGAAGATTGTGGTTGCCAAGAGAAAGGTAACCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302291.8
ENST00000418342.5
ENST00000471849.5
ENST00000475164.2