RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LUC7L3 (Homo sapiens)

Ensembl gene IDs: ENSG00000108848

Ensembl transcript IDs: ENST00000240304.5, ENST00000393227.6, ENST00000503728.1, ENST00000504065.5, ENST00000504563.6, ENST00000505619.5, ENST00000505658.6, ENST00000506686.5, ENST00000507200.5, ENST00000508045.5, ENST00000508218.5, ENST00000508482.5, ENST00000509335.5, ENST00000509487.1, ENST00000510984.5, ENST00000511974.5, ENST00000513969.5, ENST00000625349.2

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGAAATGCCCACAGGCTTCAGAAACAGACCCTCACCAGTTCTTCTaGAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAAC +
Preference number: 1 (lower is better)
Translates to: RKCPQASETDPHQFF*RPLCPHDHLSLHQN
Trigger: GTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGTGAGGGTCTGTTTCTGAAGCCTGTGGGCATTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 90 bp TTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTaGACAGGTAGCTTCAATGAGGAAGAGTCGTCTTGTTGTCCCGTA +
Preference number: 1 (lower is better)
Translates to: FLWESPPFVPYGLLR*TGSFNEEESSCCPV
Trigger: TACGGGACAACAAGACGACTCTTCCTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR GCA 90 bp TCCGCCTTCTTTCTCTACTTCGTGACCTTTTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATGTTCGGCTTGAGTGTCTACTTCGTG +
Preference number: 1 (lower is better)
Translates to: SAFFLYFVTFCGPET*CIFCLMFGLSVYFV
Trigger: CACGAAGTAGACACTCAAGCCGAACATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR GCA 90 bp GCCTTCTTTCTCTACTTCGTGACCTTTTGTGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTCGGCTTGAGTGTCTACTTCGTGAAC +
Preference number: 1 (lower is better)
Translates to: AFFLYFVTFCGPETC*IFCLMFGLSVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR GCA 90 bp TTATCATCAGATCCCCTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGTGCACAGGTAGCTTCAATGAGGAAG +
Preference number: 1 (lower is better)
Translates to: LSSDPLFSCGKVLPL*LMGFSGAQVASMRK
Trigger: CTTCCTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGATCTGATGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR GCA 90 bp CCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTACTTCTGCTCCGCCTTCTTTCTCTAC +
Preference number: 1 (lower is better)
Translates to: PDFEICVFFLIDHGF*FFVDLYFCSAFFLY
Trigger: GTAGAGAAAGAAGGCGGAGCAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 90 bp CTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGATCTCTACTTCTGCTCCGCCTTCTT +
Preference number: 1 (lower is better)
Translates to: LRSRLRDLCFLSDRS*LLLLRRSLLLLRLL
Trigger: AAGAAGGCGGAGCAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 90 bp TCTCTAGGGTATGTATCCGGGAATGAATGGCTACGAGAGAGGTTATaGCACACCCACTTATACCAAATTGTTTCCCGTTTCCCAAAGTTG +
Preference number: 1 (lower is better)
Translates to: SLGYVSGNEWLRERL*HTHLYQIVSRFPKL
Trigger: CAACTTTGGGAAACGGGAAACAATTTGGTATAAGTGGGTGTGCCATAACCTCTCTCGTAGCCATTCATTCCCGGATACATACCCTAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR TCA 90 bp GTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGTATCAGCCAGTaGGTGACTATTCCTACATACCTATGGCTGACTGCAAATTCTCCT +
Preference number: 1 (lower is better)
Translates to: VCPCYSHCCFKCISQ*VTIPTYLWLTANSP
Trigger: AGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAATAGTCACTCACTGGCTGATACATTTAAAGCAGCAGTGTGAATAGCAAGGACAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 90 bp ACACAACAGTTAAGCGTAAAGATCACAGGCAATAGCATTCAAACATaGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTA +
Preference number: 1 (lower is better)
Translates to: TQQLSVKITGNSIQT*MWVEKGVPGMSTCL
Trigger: TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCCTGTGATCTTTACGCTTAACTGTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
3UTR CCA 90 bp GCATGGCAGAAATGTTTGTTTCTTCTAGTGAACTGGTCTCAATACTaGATTCTTGTGAGCTGGTTAGCAACAATCAGTTCCTCTTCAGTC +
Preference number: 1 (lower is better)
Translates to: AWQKCLFLLVNWSQY*ILVSWLATISSSSV
Trigger: GACTGAAGAGGAACTGATTGTTGCTAACCAGCTCACAAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAACAAACATTTCTGCCATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR TCA 90 bp AGCCCTAATCAAAGTGAGAAACAATACACTTACCTCTGTCTGATCTaGGGTCTTATCAGATCAGTTTTAATTGGACTGAGTGTCACCTTC +
Preference number: 1 (lower is better)
Translates to: SPNQSEKQYTYLCLI*GLIRSVLIGLSVTF
Trigger: GAAGGTGACACTCAGTCCAATTAAAACTGATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGTATTGTTTCTCACTTTGATTAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR GCA 90 bp ATGTATCAGCCAGTGAGTGACTATTCCTACATACCTATGGCTGACTaGAAATTCTCCTACACAGTAGGAAATATTAAGCACATACCTCTT +
Preference number: 1 (lower is better)
Translates to: MYQPVSDYSYIPMAD*KFSYTVGNIKHIPL
Trigger: AAGAGGTATGTGCTTAATATTTCCTACTGTGTAGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAATAGTCACTCACTGGCTGATACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 90 bp TTCTTCTTTTCTTCCTATTACACACAAATGCTTAAATCCATCCCCTaGTACGCATGTGTAAGAGTTTCTCTAGGGTATGTATCCGGGAAT +
Preference number: 1 (lower is better)
Translates to: FFFSSYYTQMLKSIP*YACVRVSLGYVSGN
Trigger: ATTCCCGGATACATACCCTAGAGAAACTCTTACACATGCGTACCAGGGGATGGATTTAAGCATTTGTGTGTAATAGGAAGAAAAGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 90 bp TTGATCCTTCTATTGTTGAGTTTTGTCCATGTTCACATACACAGCTaGAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATATAC +
Preference number: 1 (lower is better)
Translates to: LILLLLSFVHVHIHS*SSVSLLWNSTVGIY
Trigger: GTATATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGAACATGGACAAAACTCAACAATAGAAGGATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 90 bp AGTCTGAAAACTTTAATCAGAAGGTGGCTGAGCTCAACCAATATGTaGTCCAAGTGTTCTCAGACCTTAGAAATAAGGTTGGTTATTTAT +
Preference number: 1 (lower is better)
Translates to: SLKTLIRRWLSSTNM*SKCSQTLEIRLVIY
Trigger: ATAAATAACCAACCTTATTTCTAAGGTCTGAGAACACTTGGACCACATATTGGTTGAGCTCAGCCACCTTCTGATTAAAGTTTTCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 90 bp AGACCTTCCAAAGAGAAAATACATATTCACCAACTAATAACTTTTTaGTCTGCATGGCAGAAATGTTTGTTTCTTCTAGTGAACTGGTCT +
Preference number: 1 (lower is better)
Translates to: RPSKEKIHIHQLITF*SAWQKCLFLLVNWS
Trigger: AGACCAGTTCACTAGAAGAAACAAACATTTCTGCCATGCAGACCAAAAAGTTATTAGTTGGTGAATATGTATTTTCTCTTTGGAAGGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR TCA 90 bp TCCAGAGGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCACACTTACCTCTGTCTaGTCTGAGGTCTTATCAGAT +
Preference number: 2 (lower is better)
Translates to: SRGEDVLSSRLVGPLERLTLTSV*SEVLSD
Trigger: ATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGT...GAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CCA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAACCACAGGACCCTCCCTaGATAAGTCATTTAACACAC +
Preference number: 2 (lower is better)
Translates to: TSSSEDPCALMITSPSIKPQDPP*ISHLTH
Trigger: GTGTGTTAAATGACTTATCCAGGGAGGGTCCTGTGG...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR GCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAATGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 2 (lower is better)
Translates to: QRGTLMGARVCYKIAETKCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR TCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAATCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 2 (lower is better)
Translates to: QRGTLMGARVCYKIAETKSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR GCA 90 bp TCGATTCAGTGTTTGTGTCTTCACTCTGCTTTTCTCGACTACCGGACTTCACACTATGGGCTTCTCCGGTaGACAGGTAGCTTCAATGAG +
Preference number: 2 (lower is better)
Translates to: SIQCLCLHSAFLDYRTSHYGLLR*TGSFNE
Trigger: CTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATA...GTGTGAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR-3UTR CCA 90 bp CTGTGCTTATATGACTTTCGATCCCGGCTTTTTGATCTTCTTCGATCCCGACTTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 2 (lower is better)
Translates to: LCLYDFRSRLFDLLRSRLFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...AAGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAAAGTCATATAAGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CCA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAATGGATTCTTGTGAGCTaGTTAGCAACAATCAGTTCC +
Preference number: 2 (lower is better)
Translates to: TSSSEDPCALMITSPSIKWILVS*LATISS
Trigger: GGAACTGATTGTTGCTAACCAGCTCACAAGAATCCA...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATTCCCTTTGTGCCTTATaGGCTTCTCCGGTGCACAGG +
Preference number: 2 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHSLCAL*ASPVHR
Trigger: CCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGA...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
3UTR-3UTR CCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTCCCTTTGTGCCTTATaGGCTTCTCCGGTGCACAGG +
Preference number: 2 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRSLCAL*ASPVHR
Trigger: CCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGA...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
3UTR-3UTR TCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGTGTTTCAACCCAAACTaGAAAATGAATGGACTGTGT +
Preference number: 2 (lower is better)
Translates to: SSSEDPCALMITSPSIKTCFNPN*KMNGLC
Trigger: ACACAGTCCATTCATTTTTCAGTTTGGGTTGAAACA...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR GCA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGAGTTACAGAACAAACTaGATTAGAATGCAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQSYRTN*IRMQGN
Trigger: ATTGCCTTGCATTCTAATGCAGTTTGTTCTGTAACT...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR-3UTR GCA 90 bp CTTCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATGGCTTATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 2 (lower is better)
Translates to: LLRSRLRDLCFLSDRSWLMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...AAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR GCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAAATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 2 (lower is better)
Translates to: QRGTLMGARVCYKIAETKIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTCCCCTCTTTTCTTGTaGGAAAGTCCTCCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTSPLFL*ESPPFV
Trigger: CACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR-3UTR CCA 90 bp GCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTCTCTTTTCTTCTGCCTaGTGCCTCCAAATCCTGAGC +
Preference number: 2 (lower is better)
Translates to: AKLSIVDVVDLSSSLSSFLFSSA*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGGCAGAAGAAAAGAG...AAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508045.5
3UTR CAA 90 bp GATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTaGACTGAATCCTTGATTTTTAATTTGGCTTTTCATGGGCCGCTC +
Preference number: 2 (lower is better)
Translates to: DVGRERSTWHEYLLS*TESLIFNLAFHGPL
Trigger: GAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR-3UTR GCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGT +
Preference number: 2 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHKVLPL*LMGFSG
Trigger: ACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTT...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
3UTR-3UTR GCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTTTCCATCTTCATCTGTaGATACTTACGCTGCACTGT +
Preference number: 2 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSFHLHL*ILTLHC
Trigger: ACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR GCA 90 bp CAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTAATTGCTCAATTTTCTTCTGCCTGGTaGCTCCAAATCCTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: QLSTLWTLAVLSLLLIAQFSSAW*LQILSL
Trigger: CAGGCTCAGGATTTGGAGGCACCAGGCAGAAGAAAA...TTGAGCAATTAAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508045.5
3UTR-3UTR CCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGTCAATCCAATGCTACTaGCTCTCGAGTTACAGAACA +
Preference number: 2 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLSIQCY*LSSYRT
Trigger: TGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTGA...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR-3UTR GCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 2 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
3UTR CAA 90 bp ACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTaGGAATATACCACAGTATTTATCCAACACACTGTTGGTGGACAC +
Preference number: 2 (lower is better)
Translates to: TYTAAVQFHFCGIPL*EYTTVFIQHTVGGH
Trigger: GTGTCCACCAACAGTGTGTTGGATAAATACTGTGGTATATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR TCA 90 bp GTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: VFLVQQSFQLSTLWTLAVHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...AACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508045.5
3UTR-3UTR GCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTTTAGTATCCCCTTCTaGAGGCTTTTAGGGTACAGG +
Preference number: 2 (lower is better)
Translates to: ISLIANFHETRALLILFSFSIPF*RLLGYR
Trigger: CCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
3UTR-3UTR TCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACACTTACCTCTGTCTaGTCTGAGGTCTTATCAGAT +
Preference number: 2 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHTLTSV*SEVLSD
Trigger: ATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGT...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000505658.6
3UTR-3UTR TCA 90 bp GTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 2 (lower is better)
Translates to: VFLVQQSFQLSTLWTLAVLLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...AACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR TCA 90 bp TCACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATACCAAGCAATCTGATTaGTTAAAACTGGTTTGCTCC +
Preference number: 2 (lower is better)
Translates to: SHTQLQFSFTSVEFHCWNTKQSD*LKLVCS
Trigger: GGAGCAAACCAGTTTTAATCAATCAGATTGCTTGGT...ATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR GCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGAGTTACAGAACAAACTaGATTAGAATGCAAGGCAAT +
Preference number: 2 (lower is better)
Translates to: GRERSTWHEYLLSLTESLSYRTN*IRMQGN
Trigger: ATTGCCTTGCATTCTAATGCAGTTTGTTCTGTAACT...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR-3UTR GCA 90 bp CCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTAGTATCACTTTTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGAC +
Preference number: 2 (lower is better)
Translates to: PSDLMSSLVPLTSFLVSLFVSSL*FSRLPD
Trigger: GTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAA...AAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
3UTR-3UTR CCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTTTTTTCACACGGACCTaGTGCCTCCAAATCCTGAGC +
Preference number: 2 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFFFTRT*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGGTCCGTGTGAAAAA...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
41% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000504563.6
3UTR-3UTR CCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 2 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000508482.5
3UTR-3UTR CCA 90 bp TCACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATATTCCTACATACCTATaGCTGACTGCAAATTCTCCT +
Preference number: 2 (lower is better)
Translates to: SHTQLQFSFTSVEFHCWNIPTYL*LTANSP
Trigger: AGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAAT...ATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR TCA 90 bp TCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGTATCTACCTCTGTCTGATCTaGGGTCTTATCAGATCAGTT +
Preference number: 2 (lower is better)
Translates to: SQIEGVCPCYSHCCFKCIYLCLI*GLIRSV
Trigger: AACTGATCTGATAAGACCTCAGATCAGACAGAGGTA...GATACATTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR GCA 90 bp TTGATTTCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAACTTCCATCAATCCAATaGTACTGGCTCTCGAGTTAC +
Preference number: 2 (lower is better)
Translates to: LISQIEGVCPCYSHCCFKLPSIQ*YWLSSY
Trigger: GTAACTCGAGAGCCAGTAGCATTGGATTGATGGAAG...TTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGAAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR TCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCACATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 2 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000509335.5
3UTR CAA 90 bp CATATTCACCAACTAATAACTTTTTGGTCTGCATGGCAGAAATGTTaGTTTCTTCTAGTGAACTGGTCTCAATACTGGATTCTTGTGAGC +
Preference number: 2 (lower is better)
Translates to: HIHQLITFWSAWQKC*FLLVNWSQYWILVS
Trigger: GCTCACAAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAACAAACATTTCTGCCATGCAGACCAAAAAGTTATTAGTTGGTGAATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR TCA 90 bp TCCTACACAGTAGGAAATATTAAGCACATACCTCTTATAGACTTGAGAATTGCACTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 2 (lower is better)
Translates to: SYTVGNIKHIPLIDLRIALLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...TGCAATTCTCAAGTCTATAAGAGGTATGTGCTTAATATTTCCTACTGTGTAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR TCA 72 bp CCACAGGCTTCAGAAACAGACCCTCACCAGTTCTTCTaGAGACCCCTGTGCCCTCATGATCACCTCTCCCTC +
Preference number: 3 (lower is better)
Translates to: PQASETDPHQFF*RPLCPHDHLSL
Trigger: GAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGTGAGGGTCTGTTTCTGAAGCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp CTGCCTGGGGAAAAACATCTGGCTGTATCCTTCTGGTaGCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTG +
Preference number: 3 (lower is better)
Translates to: LPGEKHLAVSFW*LQILSLSRVLL
Trigger: CAGCAGAACCCTGGACAGGCTCAGGATTTGGAGGCACCAGAAGGATACAGCCAGATGTTTTTCCCCAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506686.5
3UTR GCA 72 bp GATCCCCTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGTGCACAGGTAGCTTCA +
Preference number: 3 (lower is better)
Translates to: DPLFSCGKVLPL*LMGFSGAQVAS
Trigger: TGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR GCA 72 bp CTCTACTTCGTGACCTTTTGTGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTCGGCTTGAGTGTCTAC +
Preference number: 3 (lower is better)
Translates to: LYFVTFCGPETC*IFCLMFGLSVY
Trigger: GTAGACACTCAAGCCGAACATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 72 bp CTGCTCCGCCTTCTTTCTCTACTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCATCTTCTGTCTGATGTT +
Preference number: 3 (lower is better)
Translates to: LLRLLSLLRDLL*SRDLLHLLSDV
Trigger: AACATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGCGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CAA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTT +
Preference number: 3 (lower is better)
Translates to: PPNPEPVQGSADQTLASVLLGYR*LCSVAF
Trigger: AAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
3UTR-3UTR CAA 90 bp TCCAGAGGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCTTCATTAGGAATATTTaGTCCCACACCACTAGCCCA +
Preference number: 3 (lower is better)
Translates to: SRGEDVLSSRLVGPLERLFIRNI*SHTTSP
Trigger: TGGGCTAGTGGTGTGGGACAAAATATTCCTAATGAA...GAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp TTTCTCTACTTCGTGACCTTTTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATGTTCGGCTTGAGTGTC +
Preference number: 3 (lower is better)
Translates to: FLYFVTFCGPET*CIFCLMFGLSV
Trigger: GACACTCAAGCCGAACATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CAA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTT +
Preference number: 3 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFLLGYR*LCSVAF
Trigger: AAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAG...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
3UTR TCA 72 bp ATGTATTATCTCTACATTCCAGAGGAGAGGATGTCTTaGGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCA +
Preference number: 3 (lower is better)
Translates to: MYYLYIPEERMS*AADWSVLLKGS
Trigger: TGAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGAATGTAGAGATAATACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp GAGATCTGTGTTTTCTTTCTGATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTACTTCTGCTCCGCCTTC +
Preference number: 3 (lower is better)
Translates to: EICVFFLIDHGF*FFVDLYFCSAF
Trigger: GAAGGCGGAGCAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR TCA 72 bp TCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCTTCTTCGTCGATCTCT +
Preference number: 3 (lower is better)
Translates to: SSIPTSRSVFSF*SIMASASSSIS
Trigger: AGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 72 bp CGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGATCTCTACTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: RLRDLCFLSDRS*LLLLRRSLLLL
Trigger: GAGCAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CAA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATGGAAGAGTCGTCTTGTaGTCCCGTAGAGGACTAGTA +
Preference number: 3 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHGRVVL*SRRGLV
Trigger: TACTAGTCCTCTACGGGACAACAAGACGACTCTTCC...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR-3UTR CAA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
3UTR-3UTR CAA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 3 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 72 bp CATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTaGCATGAGTACCTGCTTAGTTTGACTGAATCCTTG +
Preference number: 3 (lower is better)
Translates to: HSNMDVGRERST*HEYLLSLTESL
Trigger: CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
3UTR CCA 72 bp TATGTATCCGGGAATGAATGGCTACGAGAGAGGTTATaGCACACCCACTTATACCAAATTGTTTCCCGTTTC +
Preference number: 3 (lower is better)
Translates to: YVSGNEWLRERL*HTHLYQIVSRF
Trigger: GAAACGGGAAACAATTTGGTATAAGTGGGTGTGCCATAACCTCTCTCGTAGCCATTCATTCCCGGATACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CAA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
3UTR-3UTR CAA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 3 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR TCA 72 bp TGCTATTCACACTGCTGCTTTAAATGTATCAGCCAGTaGGTGACTATTCCTACATACCTATGGCTGACTGCA +
Preference number: 3 (lower is better)
Translates to: CYSHCCFKCISQ*VTIPTYLWLTA
Trigger: TGCAGTCAGCCATAGGTATGTAGGAATAGTCACTCACTGGCTGATACATTTAAAGCAGCAGTGTGAATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 72 bp CTAGTGAACTGGTCTCAATACTGGATTCTTGTGAGCTaGTTAGCAACAATCAGTTCCTCTTCAGTCACATCA +
Preference number: 3 (lower is better)
Translates to: LVNWSQYWILVS*LATISSSSVTS
Trigger: TGATGTGACTGAAGAGGAACTGATTGTTGCTAACCAGCTCACAAGAATCCAGTATTGAGACCAGTTCACTAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp TCACTTTCCTTCGATTCAGTGTTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGACTTCACACTACTTTTT +
Preference number: 3 (lower is better)
Translates to: SLSFDSVFVSSL*FSRLPDFTLLF
Trigger: AAAAAGTAGTGTGAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGAAGGAAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
3UTR GCA 72 bp CCAGTGAGTGACTATTCCTACATACCTATGGCTGACTaGAAATTCTCCTACACAGTAGGAAATATTAAGCAC +
Preference number: 3 (lower is better)
Translates to: PVSDYSYIPMAD*KFSYTVGNIKH
Trigger: GTGCTTAATATTTCCTACTGTGTAGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAATAGTCACTCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp GCTACAACCACAATGCTGTCAAACTACACAAAGCAGTaGCTGGGAGCTATCTTTGTGTTTGTTAGATTTTAC +
Preference number: 3 (lower is better)
Translates to: ATTTMLSNYTKQ*LGAIFVFVRFY
Trigger: GTAAAATCTAACAAACACAAAGATAGCTCCCAGGCACTGCTTTGTGTAGTTTGACAGCATTGTGGTTGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR GCA 72 bp TTTCTATCTTGTTCTCTGTCCCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCCCGGCTTTTTGATCTT +
Preference number: 3 (lower is better)
Translates to: FLSCSLSRLLLL*LYDFRSRLFDL
Trigger: AAGATCAAAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGAACAAGATAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR CCA 72 bp AGCAACTCCATAAACATGAAGCCACAGGACCCTCCCTaGATAAGTCATTTAACACACTGTTTCTTTACCTAT +
Preference number: 3 (lower is better)
Translates to: SNSINMKPQDPP*ISHLTHCFFTY
Trigger: ATAGGTAAAGAAACAGTGTGTTAAATGACTTATCCAGGGAGGGTCCTGTGGCTTCATGTTTATGGAGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 72 bp CAACCACAATGCTGTCAAACTACACAAAGCAGTGCCTaGGAGCTATCTTTGTGTTTGTTAGATTTTACTTCC +
Preference number: 3 (lower is better)
Translates to: QPQCCQTTQSSA*ELSLCLLDFTS
Trigger: GGAAGTAAAATCTAACAAACACAAAGATAGCTCCCAGGCACTGCTTTGTGTAGTTTGACAGCATTGTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 72 bp ACTTTAATCAGAAGGTGGCTGAGCTCAACCAATATGTaGTCCAAGTGTTCTCAGACCTTAGAAATAAGGTTG +
Preference number: 3 (lower is better)
Translates to: TLIRRWLSSTNM*SKCSQTLEIRL
Trigger: CAACCTTATTTCTAAGGTCTGAGAACACTTGGACCACATATTGGTTGAGCTCAGCCACCTTCTGATTAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CAA 90 bp TTTGATCTTCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 3 (lower is better)
Translates to: FDLLRSRLRDLCFLSDRSSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...TGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAGATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
3UTR-3UTR CAA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTT +
Preference number: 3 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFLLGYR*LCSVAF
Trigger: AAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAG...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
3UTR-3UTR CAA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
3UTR CCA 72 bp TTCATAAACCCTACACTTCCATCAATCCAATGCTACTaGCTCTCGAGTTACAGAACAAACTGCATTAGAATG +
Preference number: 3 (lower is better)
Translates to: FINPTLPSIQCY*LSSYRTNCIRM
Trigger: CATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTGATGGAAGTGTAGGGTTTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR CCA 72 bp TCAGTTCTTACAAGTCTGAAAACTTTAATCAGAAGGTaGCTGAGCTCAACCAATATGTGGTCCAAGTGTTCT +
Preference number: 3 (lower is better)
Translates to: SVLTSLKTLIRR*LSSTNMWSKCS
Trigger: AGAACACTTGGACCACATATTGGTTGAGCTCAGCCACCTTCTGATTAAAGTTTTCAGACTTGTAAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 72 bp CTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTaGAATATACCACAGTATTTATCCAACACACTGTTG +
Preference number: 3 (lower is better)
Translates to: LQFSFTSVEFHC*NIPQYLSNTLL
Trigger: CAACAGTGTGTTGGATAAATACTGTGGTATATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CAA 90 bp TTGATTTCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATCCTTGATTTTTAATTaGGCTTTTCATGGGCCGCTC +
Preference number: 3 (lower is better)
Translates to: LISQIEGVCPCYSHCCFKSLIFN*AFHGPL
Trigger: GAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGA...TTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGAAATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CCA 72 bp AAATGTTTGTTTCTTCTAGTGAACTGGTCTCAATACTaGATTCTTGTGAGCTGGTTAGCAACAATCAGTTCC +
Preference number: 3 (lower is better)
Translates to: KCLFLLVNWSQY*ILVSWLATISS
Trigger: GGAACTGATTGTTGCTAACCAGCTCACAAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAACAAACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR-3UTR CAA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCAGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: NFSMATILQMWAIISKEAVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
3UTR TCA 72 bp CAAAGTGAGAAACAATACACTTACCTCTGTCTGATCTaGGGTCTTATCAGATCAGTTTTAATTGGACTGAGT +
Preference number: 3 (lower is better)
Translates to: QSEKQYTYLCLI*GLIRSVLIGLS
Trigger: ACTCAGTCCAATTAAAACTGATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGTATTGTTTCTCACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
3UTR TCA 72 bp AGTAAATTCTTTAACAATTCATTATGCCTATTAGAATaGACACAGTGGCTTAACAGGCACTGGACCATGAGG +
Preference number: 3 (lower is better)
Translates to: SKFFNNSLCLLE*TQWLNRHWTMR
Trigger: CCTCATGGTCCAGTGCCTGTTAAGCCACTGTGTTCATTCTAATAGGCATAATGAATTGTTAAAGAATTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVARPKS*CFLRAA
Trigger: AGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGC...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVAARPKS*CFLRAA
Trigger: AGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGC...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp GCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACTCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 4 (lower is better)
Translates to: AALVGKSSLCALWASPVHSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...GTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR GCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVRPKSW*FLRAAV
Trigger: AACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
3UTR CAA 72 bp GCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTaGTGCCTTATGGGCTTCTCCGGTGCACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: AYLRCTCGKVLP*CLMGFSGAQVA
Trigger: AGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR GCA 90 bp GTTCTGCTGATCAAACACTCGCTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTACCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: VLLIKHSLLFSIPFCRLLPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...TAAAAGCCTGCAGAAGGGGATACTAAACAGAAGCGAGTGTTTGATCAGCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QSNATGSRVTEQTALECKGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLARPKS*CFLRAA
Trigger: AGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGC...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp GTGCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCCCTTTGTGCCTTATaGGCTTCTCCGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VHTYAALVGKSSLCALWASLCAL*ASPVHR
Trigger: CCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGA...AGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
3UTR CAA 72 bp TCAGATCCCCTCTTTTCTTGTGGGAAAGTCCTCCCTTaGTGCCTTATGGGCTTCTCCGGTGCACAGGTAGCT +
Preference number: 4 (lower is better)
Translates to: SDPLFSCGKVLP*CLMGFSGAQVA
Trigger: AGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGRPKSW*FLRAAV
Trigger: AACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCG...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: AKLSIVDVVDLSSSLSSFPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...AAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508045.5
ENST00000508482.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp ATCCCCTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: IPSFLVGKSSLCALWASPCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...CGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR GCA 90 bp CTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LTLHLWESPPFVPYGLLRMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...CCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLARPKS*CFLRAA
Trigger: AGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGC...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTTTACAAACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFLQTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAA...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR CCA 90 bp CTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LFSCGKVLPLCLMGFSGALRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...TGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CCA 90 bp GGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCAATGAACCAACACACTGTTGGTaGACACTTGGGATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: GEDVLSSRLVGPLERLNEPTHCW*TLGIFP
Trigger: CGGGAAGATCCCAAGTGTCCACCAACAGTGTGTTGG...TTCATTGAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCTGGCTGTATCCTTCTaGTGCCTCCAAATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVLAVSF*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGAAGGATACAGCCAG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506686.5
CDS-3UTR TCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVAEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR TCA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTTGTCCAGGGTTCTGCTaGTCAAACACTCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFACPGFC*SNTRFC
Trigger: ACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACA...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFANSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp GCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: AALVGKSSLCALWASPVHRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...GTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR GCA 90 bp TCCAGAGGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCCTTGAAAACCAATCCTaGATGAAGTCCCATCCCACA +
Preference number: 4 (lower is better)
Translates to: SRGEDVLSSRLVGPLERLLENQS*MKSHPT
Trigger: TGTGGGATGGGACTTCATGCAGGATTGGTTTTCAAG...GAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTCTGCTCTGTTGCGTTTaGTGCTACTCCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFLLCCV*CYSSIH
Trigger: GTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAG...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTACAAACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESLQTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAA...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp TTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACAGGTAGCCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: LWESPPFVPYGLLRCTGSLSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...GCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
CDS-3UTR CCA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTCTGGGGAAAAACATCTaGCTGTATCCTTCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFALGKNI*LYPSGA
Trigger: GGCACCAGAAGGATACAGCCAGATGTTTTTCCCCAG...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000506686.5
3UTR CAA 72 bp CTTCTGCTCCGCCTTCTTTCTCTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTGCATCTTCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLRLLSLLRDL*WSRDLLHLLSD
Trigger: ATCAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGCGGAGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR TCA 90 bp CTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCAGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: LFSCGKVLPLCLMGFSGAAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...TGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCAACACCAACGCTGTGTaGGGTATGGTAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESNTNAV*GMVVSC
Trigger: GCAGCTGACTACCATACCTCACACAGCGTTGGTGTT...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp CTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LFNGDYITNVGDNFQRGTPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...TGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR GCA 90 bp ACTTCACAAACTTCCATTTGTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TSQTSICFSCAAKLSIVDGPTAR*CASRPG
Trigger: CCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACC...GTCGACAATTGAAAGCTTTGCTGCACAAGAAAAACAAATGGAAGTTTGTGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508045.5
ENST00000508482.5
CDS-3UTR GCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGCTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp CCTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCCTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: PLFLWESPPFVPYGLLRCLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...GCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR GCA 90 bp GGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCAATGAAATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: GEDVLSSRLVGPLERLNEMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...TTCATTGAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGCTCTGTTGCGTTTGCTaGTACTCCTCCATCCACTTG +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVALCCVC*YSSIHL
Trigger: CAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAG...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISARPKS*CFLRAA
Trigger: AGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGTTACAAACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLLQTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAA...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp CTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTAATTGCGCCGACAAGACAAAATaGCCGCCGCGCGGACGCCTT +
Preference number: 4 (lower is better)
Translates to: LSIVDVVDLSSSLSSFNCADKTK*PPRGRL
Trigger: AAGGCGTCCGCGCGGCGGCCATTTTGTCTTGTCGGC...GCAATTAAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTTTCACACGGACCTaGTGCCTCCAAATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVAFFTRT*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGGTCCGTGTGAAAAA...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000509335.5
3UTR CAA 72 bp CCCGAGACCTGCTGCATCTTCTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAACGACTTCTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PETCCIFCLMFG*SVYFVNDFSFF
Trigger: GAAGAAAGAGAAGTCGTTCACGAAGTAGACACTCAAGCCGAACATCAGACAGAAGATGCAGCAGGTCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR TCA 90 bp ACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCACGAGTCTGCTCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TNVGDNFQRGTLMGARVCSFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...GCAGACTCGTGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR TCA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAACTACATACCTATGGCTaGCTGCAAATTCTCCTACAC +
Preference number: 4 (lower is better)
Translates to: TSSSEDPCALMITSPSIKLHTYG*LQILLH
Trigger: GTGTAGGAGAATTTGCAGTCAGCCATAGGTATGTAG...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCAACCCCTGTGCCCTCATaGTCACCTCTCCCTCCATCA +
Preference number: 4 (lower is better)
Translates to: EEAFVCLLTRLSSIFICATPVPS*SPLPPS
Trigger: TGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGT...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QSNATGSRVTEQTALECKRPKSW*FLRAAV
Trigger: AACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCG...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLGPETC*IFCLMF
Trigger: GAACATCAGACAGAAGATGCAGCAGGTCTCGGGACC...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGAACCCATTCATCTATTaGTGCATCTCCAGGATCAGC +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTNPFIY*CISRIS
Trigger: GCTGATCCTGGAGATGCAGCAATAGATGAATGGGTT...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTTTTAGTATCCCCTTCTaGAGGCTTTTAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFAFSIPF*RLLGYR
Trigger: CCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp CGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATGGCTTCTGCTTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RSRLRDLCFLSDRSWLLLFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...AAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGCAATTGTCGACGTTGTaGACCTTAGCAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTQLSTL*TLAVLS
Trigger: AGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCAATTGTCGACGTTGTaGACCTTAGCAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVQLSTL*TLAVLS
Trigger: AGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGCTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALLRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTLSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGATCAAGGCATCAGTGTaGTTCTTAAAGCCATGTGCC +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTIKASV*FLKPCA
Trigger: GGCACATGGCTTTAAGAACCACACTGATGCCTTGAT...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCAATGAATATCCAACACACTGTTaGTGGACACTTGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: GEDVLSSRLVGPLERLNEYPTHC*WTLGIF
Trigger: GAAGATCCCAAGTGTCCACCAACAGTGTGTTGGATA...TTCATTGAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCTCTTTTCTTCTGCCTaGGGAAAAACATCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVLFSSA*GKTSGC
Trigger: ACAGCCAGATGTTTTTCCCCAGGCAGAAGAAAAGAG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506686.5
CDS-3UTR CCA 90 bp CCATCTTCATCTGTGCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTCTTACGCTGCACTTGTaGGAAAGTCCTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSSSVHTYAALVGKSSLCLTLHL*ESPPFV
Trigger: CACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAG...ACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGCACAGATGAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR TCA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPNPEPVQGSADQTLASVHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR TCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR TCA 90 bp CCATCTTCATCTGTGCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PSSSVHTYAALVGKSSLCAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...ACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGCACAGATGAAGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR TCA 90 bp TCCAGAGGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCTCAGGAAATCAAACTTaGAAACCAATCCTGCATGAA +
Preference number: 4 (lower is better)
Translates to: SRGEDVLSSRLVGPLERLSGNQT*KPILHE
Trigger: TTCATGCAGGATTGGTTTTCAAGTTTGATTTCCTGA...GAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCACCTCACCAGTTCTTCTaGAGACCCCTGTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: EEAFVCLLTRLSSIFICAPHQFF*RPLCPH
Trigger: ATGAGGGCACAGGGGTCTTCAGAAGAACTGGTGAGG...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISRPKSW*FLRAAV
Trigger: AACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAACCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKPTARC*ASRPGL
Trigger: TAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGG...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp AATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACCTTCCATCAATCCAATaGTACTGGCTCTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: NVGDNFQRGTLMGARVCYLPSIQ*YWLSSY
Trigger: GTAACTCGAGAGCCAGTAGCATTGGATTGATGGAAG...GTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp GTTCTGCTGATCAAACACTCGCTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTACTGCTCTGTTGCGTTTaGTGCTACTCCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: VLLIKHSLLFSIPFCRLLLLCCV*CYSSIH
Trigger: GTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAG...TAAAAGCCTGCAGAAGGGGATACTAAACAGAAGCGAGTGTTTGATCAGCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTAGTATCCCCTTCTaGAGGCTTTTAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVAFSIPF*RLLGYR
Trigger: CCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALKVLPL*LMGFSG
Trigger: ACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTT...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR GCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAAAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: QRGTLMGARVCYKIAETKKVLPL*LMGFSG
Trigger: ACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTT...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CCA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAATCAATCCAATGCTACTaGCTCTCGAGTTACAGAACA +
Preference number: 4 (lower is better)
Translates to: TSSSEDPCALMITSPSIKSIQCY*LSSYRT
Trigger: TGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTGA...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGCAGAACGTGTATTTGTaGACAATTCCGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: FSIPFCRLLGYRLLCSVAQNVYL*TIPQDK
Trigger: TTTGTCCTGCGGAATTGTTCACAAATACACGTTCTG...CGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp TCACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: SHTQLQFSFTSVEFHCWNEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...ATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGTCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLSFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGTCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLSFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTATCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR TCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR TCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR TCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGCTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTLLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CTTATGGGCTTCTCCGGTGCACAGGTAGCTTCAATGAGGAAGAGTCGTCTTGTTACACTTACCTCTGTCTaGTCTGAGGTCTTATCAGAT +
Preference number: 4 (lower is better)
Translates to: LMGFSGAQVASMRKSRLVTLTSV*SEVLSD
Trigger: ATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGT...AACAAGACGACTCTTCCTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCGACGTTGATTCTAGATaGGGCAGAGCAGAACAAATC +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCDVDSR*GRAEQI
Trigger: GATTTGTTCTGCTCTGCCTCATCTAGAATCAACGTC...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCAGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: EEAFVCLLTRLSSIFICAGPETC*IFCLMF
Trigger: GAACATCAGACAGAAGATGCAGCAGGTCTCGGGACC...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVGPETC*IFCLMF
Trigger: GAACATCAGACAGAAGATGCAGCAGGTCTCGGGACC...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp GTTCTGCTGATCAAACACTCGCTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTACTCTGTTGCGTTTGCTaGTACTCCTCCATCCACTTG +
Preference number: 4 (lower is better)
Translates to: VLLIKHSLLFSIPFCRLLLCCVC*YSSIHL
Trigger: CAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAG...TAAAAGCCTGCAGAAGGGGATACTAAACAGAAGCGAGTGTTTGATCAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTTTTAGTATCCCCTTCTaGAGGCTTTTAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSFSIPF*RLLGYR
Trigger: CCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTTACAAACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLQTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTTACAAACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSLQTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAA...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp GTTCTGCTGATCAAACACTCGCTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: VLLIKHSLLFSIPFCRLLNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...TAAAAGCCTGCAGAAGGGGATACTAAACAGAAGCGAGTGTTTGATCAGCAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR CCA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGCTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QSNATGSRVTEQTALECKLRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESLSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp ATCGATCATGGCTTCTGCTTCTTCGTCGATCTCTACTTCTGCTCCGCCTTCTTTCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: IDHGFCFFVDLYFCSAFFLSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...AAAGAAGGCGGAGCAGAAGTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCAGAGAAAGGAGTACCTaGCATGAGTACCTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCRERST*HEYLLS
Trigger: ACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTCCACAGGACCCTCCCTaGATAAGTCATTTAACACAC +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSPQDPP*ISHLTH
Trigger: GTGTGTTAAATGACTTATCCAGGGAGGGTCCTGTGG...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCAGCTCAACCAATATGTaGTCCAAGTGTTCTCAGACC +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESSSTNM*SKCSQT
Trigger: GGTCTGAGAACACTTGGACCACATATTGGTTGAGCT...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTGTATCCGGGAATGAATaGCTACGAGAGAGGTTATGG +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSVSGNE*LRERLW
Trigger: CCATAACCTCTCTCGTAGCCATTCATTCCCGGATAC...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCAAACAGTAACAAAAAGTCCCTTTGTGCCTTATaGGCTTCTCCGGTGCACAGG +
Preference number: 4 (lower is better)
Translates to: VPSSSVHTYAALSNSNKKSLCAL*ASPVHR
Trigger: CCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGA...CTTTTTGTTACTGTTTGACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTACACGGACGCTCTCGTaGTCCCACCGCACGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFTRTLS*SHRTLL
Trigger: CAGCAACGTGCGGTGGGACCACGAGAGCGTCCGTGT...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR TCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCCAGAACGTGTATTTGTaGACAATTCCGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESQNVYL*TIPQDK
Trigger: TTTGTCCTGCGGAATTGTTCACAAATACACGTTCTG...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTCAGAACGTGTATTTGTaGACAATTCCGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSQNVYL*TIPQDK
Trigger: TTTGTCCTGCGGAATTGTTCACAAATACACGTTCTG...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR TCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTSFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp ACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCACGAGTCTGCCTTGCAATTAAACACTaGGCAAGCCACATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: TNVGDNFQRGTLMGARVCLAIKH*ASHMFK
Trigger: CTTAAACATGTGGCTTGCTCAGTGTTTAATTGCAAG...GCAGACTCGTGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCAACACCAACGCTGTGTaGGGTATGGTAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRNTNAV*GMVVSC
Trigger: GCAGCTGACTACCATACCTCACACAGCGTTGGTGTT...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAAAAAACCAATCCTGCATaGAGTCCCATCCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: QRGTLMGARVCYKIAETKKTNPA*SPIPQN
Trigger: ATTCTGTGGGATGGGACTTCATGCAGGATTGGTTTT...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCACGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTT +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSRPKSW*FLRAAV
Trigger: AACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCG...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp GCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: AKLSIVDVVDLSSSLSSFNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...AAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508045.5
ENST00000508482.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISGPETC*IFCLMF
Trigger: GAACATCAGACAGAAGATGCAGCAGGTCTCGGGACC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATGGTCCCGAGACCTGCTaGATCTTCTGTCTGATGTTC +
Preference number: 4 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHGPETC*IFCLMF
Trigger: GAACATCAGACAGAAGATGCAGCAGGTCTCGGGACC...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGTGGTCCCGAGACCTaGTGCATCTTCTGTCTGATG +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRCGPET*CIFCLM
Trigger: CATCAGACAGAAGATGCAGCAGGTCTCGGGACCACA...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR GCA 90 bp TCGATTCAGTGTTTGTGTCTTCACTCTGCTTTTCTCGACTACCGGACTTCACACTTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGAC +
Preference number: 4 (lower is better)
Translates to: SIQCLCLHSAFLDYRTSHFVSSL*FSRLPD
Trigger: GTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAA...GTGTGAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTTTCCATCTTCATCTGTaGATACTTACGCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGFHLHL*ILTLHF
Trigger: GAAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393227.6
CDS-3UTR GCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTCTTCCATCAATCCAATaGTACTGGCTCTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSLPSIQ*YWLSSY
Trigger: GTAACTCGAGAGCCAGTAGCATTGGATTGATGGAAG...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTAACTACACAAAGCAGTaGCTGGGAGCTATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSNYTKQ*LGAIFV
Trigger: CACAAAGATAGCTCCCAGGCACTGCTTTGTGTAGTT...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGGGTGTGTCTGAGACTTaGTCGAAAATAATAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTGVSET*SKIIEN
Trigger: GTTTTCTATTATTTTCGAGCAAGTCTCAGACACACC...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: VFLVQQSFQLSTLWTLAVNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...AACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508045.5
ENST00000508482.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTCAATCCAATGCTACTaGCTCTCGAGTTACAGAACA +
Preference number: 4 (lower is better)
Translates to: VGRERSTWHEYLLSLTESSIQCY*LSSYRT
Trigger: TGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTGA...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTAGAGAAAGGAGTACCTaGCATGAGTACCTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSRERST*HEYLLS
Trigger: ACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CCA 90 bp AGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAACGAATAGCATTCAAACATaGATGTGGGTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SSSEDPCALMITSPSIKTNSIQT*MWVEKG
Trigger: TCCTTTCTCTACCCACATCCATGTTTGAATGCTATT...CGTTTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGGCTTAACAGGCACTaGACCATGAGGCAGAGACCT +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRWLNRH*TMRQRP
Trigger: AGGTCTCTGCCTCATGGTCCAGTGCCTGTTAAGCCA...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACAGAGCCTCTAAAGTaGGGGCGGCTTCATTATTTT +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSTEPLK*GRLHYF
Trigger: AAAATAATGAAGCCGCCCCCACTTTAGAGGCTCTGT...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGCAACTAATAACTTTTTaGTCTGCATGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQQLITF*SAWQKC
Trigger: ACATTTCTGCCATGCAGACCAAAAAGTTATTAGTTG...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp GTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTTTTCTTCTGCCTaGTGCCTCCAAATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VFLVQQSFQLSTLWTLAVLFSSA*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGGCAGAAGAAAAGAG...AACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR TCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTCGATCCCGGCTTTTTaGTCTTCTTCGATCCCGACT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISSIPAF*SSSIPT
Trigger: AGTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCCTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCLLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp TCCTTCGATTCAGTGTTTGTGTCTTCACTCTGCTTTTCTCGACTACCGGACTTCTACCTCTGTCTGATCTaGGGTCTTATCAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: SFDSVFVSSLCFSRLPDFYLCLI*GLIRSV
Trigger: AACTGATCTGATAAGACCTCAGATCAGACAGAGGTA...GAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAAGAGGAGAGGATGTCTTaGGCAGCAGACTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKEERMS*AADWSV
Trigger: GACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTC...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CAATTGTCGACGTTGTGGACCTTAGCAGTTCTCTCTCTTCTTTTAATTGCTCAATGTCCAGGGTTCTGCTaGTCAAACACTCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QLSTLWTLAVLSLLLIAQCPGFC*SNTRFC
Trigger: ACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACA...TTGAGCAATTAAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR TCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTGTCCAGGGTTCTGCTaGTCAAACACTCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSCPGFC*SNTRFC
Trigger: ACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACA...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR GCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR GCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTACTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR GCA 90 bp GACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCAATGGGGGCACGAGTCTaGTACAAAATAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: DYITNVGDNFQRGTLMGAMGARV*YKIAET
Trigger: TGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCAT...TGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGTTCCATCTTCATCTGTaGATACTTACGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLFHLHL*ILTLHC
Trigger: ACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp TCTGATCTGAGGTCTTATCAGATCAGTTTTAATTGGACTGAGTGTCACCTTCAGTATGGGCTTCTCCGGTaGACAGGTAGCTTCAATGAG +
Preference number: 4 (lower is better)
Translates to: SDLRSYQISFNWTECHLQYGLLR*TGSFNE
Trigger: CTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATA...CTGAAGGTGACACTCAGTCCAATTAAAACTGATCTGATAAGACCTCAGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR GCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTGTGCATACTTACGCTaGACTTTCTCCTTGGATTTT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCCAYLR*TFSLDF
Trigger: AAAATCCAAGGAGAAAGTGCAGCGTAAGTATGCACA...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511974.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGAATGCCAAACGAGCATaGCCTCGTCTGATCCTACGT +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSNAKRA*PRLILR
Trigger: ACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATT...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
CDS-3UTR CCA 90 bp CTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACCTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LLYVFLLGLVPSSSVHTYLRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...GTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CCA 90 bp GGACTGAGTGTCACCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: GLSVTFRFNVFTGPIDLILSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...AATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGGTGACACTCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGTCCCCTCTTTTCTTGTaGGAAAGTCCTCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVSPLFL*ESPPFV
Trigger: CACAAAGGGAGGACTTTCCCACAAGAAAAGAGGGGA...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISSFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGCTCCTGTGCTTATATaGCTTTCGATCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISAPVLI*LSIPAF
Trigger: AAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGAAATCCCACTTAGTCTaGTTCACACGAATACTAACG +
Preference number: 4 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLKSHLV*FTRILT
Trigger: CGTTAGTATTCGTGTGAATCAGACTAAGTGGGATTT...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAAAAATGTATCAGCCAGTaGGTGACTATTCCTACATAC +
Preference number: 4 (lower is better)
Translates to: QRGTLMGARVCYKIAETKKCISQ*VTIPTY
Trigger: GTATGTAGGAATAGTCACTCACTGGCTGATACATTT...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTTATGCCTATTAGAATaGACACAGTGGCTTAACAGG +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALLCLLE*TQWLNR
Trigger: CCTGTTAAGCCACTGTGTTCATTCTAATAGGCATAA...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLIIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCACTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: EEAFVCLLTRLSSIFICALCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTTATAGACTTGAGAATTaGATTGAGTGTAACAAGGCG +
Preference number: 4 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGYRLEN*IECNKA
Trigger: CGCCTTGTTACACTCAATGCAATTCTCAAGTCTATA...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTGAAGGTGTCTGTCCTTaGTATTCACACTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLIEGVCP*YSHCCF
Trigger: AAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTC...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp AAAATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTCTGCTCTGTTGCGTTTaGTGCTACTCCTCCATCCAC +
Preference number: 4 (lower is better)
Translates to: KISLIANFHETRALLILFLLCCV*CYSSIH
Trigger: GTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAG...AAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR GCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGTTCCATCTTCATCTGTaGATACTTACGCTGCACTTT +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLFHLHL*ILTLHF
Trigger: AAAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511974.5
CDS-3UTR GCA 90 bp TTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTGTGTTCCATCTTCATCTGTaGATACTTACGCTGCACTTG +
Preference number: 4 (lower is better)
Translates to: FLLGLVPSSSVHTYAALVFHLHL*ILTLHL
Trigger: CAAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...CACAAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCATTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
CDS-3UTR CCA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CCA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACTTCGTGACCTTTTGTaGTCCCGAGACCTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: NFSMATILQMWAIISKEALRDLL*SRDLLH
Trigger: ATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAG...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CCA 90 bp GACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCAACACAAAGCAGTGCCTaGGAGCTATCTTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DYITNVGDNFQRGTLMGATQSSA*ELSLCL
Trigger: CAAACACAAAGATAGCTCCCAGGCACTGCTTTGTGT...TGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAATGACCTATTTGGGATaGCTGAGGGGAAGAAATAGA +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLMTYLG*LRGRNR
Trigger: TCTATTTCTTCCCCTCAGCCATCCCAAATAGGTCAT...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TCACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SHTQLQFSFTSVEFHCWNHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...ATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAAGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTGAGCATGGCCTCGTCTaGTCCTACGTTCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFEHGLV*SYVLLL
Trigger: CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTC...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000508482.5
CDS-3UTR TCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGTCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGTCCTCTGTCTGATCTaGGGTCTTATCAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISVLCLI*GLIRSV
Trigger: AACTGATCTGATAAGACCTCAGATCAGACAGAGGAC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTCTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTLLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp CTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACCCTATTTGGGATGGCTaGGGGGAAGAAATAGATCAG +
Preference number: 4 (lower is better)
Translates to: LLYVFLLGLVPSSSVHTYPIWDG*GEEIDQ
Trigger: CTGATCTATTTCTTCCCCTCAGCCATCCCAAATAGG...GTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCATGTCCAGGGTTCTGCTaGTCAAACACTCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSCPGFC*SNTRFC
Trigger: ACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACA...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCAAACTCATCCAACAACTaGGCGGCCGAAATCATGGTG +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSNSSNN*AAEIMV
Trigger: CACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTT...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGAC +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISFVSSL*FSRLPD
Trigger: GTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCAGTTACAGAACAAACTaGATTAGAATGCAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCSYRTN*IRMQGN
Trigger: ATTGCCTTGCATTCTAATGCAGTTTGTTCTGTAACT...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp GACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCATTCCATCTTCATCTGTaGATACTTACGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: DYITNVGDNFQRGTLMGAFHLHL*ILTLHC
Trigger: ACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...TGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR GCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAATACCTATGGCTGACTaGAAATTCTCCTACACAGTA +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLIPMAD*KFSYTV
Trigger: TACTGTGTAGGAGAATTTGCAGTCAGCCATAGGTAT...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTGTGCCTGTGTATGCTTaGCTAAGTGTGAATGACATA +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLIVPVYA*LSVNDI
Trigger: TATGTCATTCACACTTAGGCAAGCATACACAGGCAC...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCTGCTACAACCACAATaGTGTCAAACTACACAAAGC +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVLLQPQ*CQTTQS
Trigger: GCTTTGTGTAGTTTGACAGCATTGTGGTTGTAGCAG...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCACTCTGTTGCGTTTGCTaGTACTCCTCCATCCACTTG +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSLCCVC*YSSIHL
Trigger: CAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAG...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR GCA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGACGCTCAAAATGTTTTaGAGGACTACACTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GRERSTWHEYLLSLTESLTLKMF*RTTLSF
Trigger: AAAAGACAGTGTAGTCCTGCAAAACATTTTGAGCGT...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511974.5
CDS-3UTR GCA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCATATGGGCTTCTCCGGTaGACAGGTAGCTTCAATGAG +
Preference number: 4 (lower is better)
Translates to: NFSMATILQMWAIISKEAYGLLR*TGSFNE
Trigger: CTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATA...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR GCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCATTTTCTTCTGCCTGGTaGCTCCAAATCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSFSSAW*LQILSL
Trigger: CAGGCTCAGGATTTGGAGGCACCAGGCAGAAGAAAA...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTTTCATTTTTGCCTGTTaGGCCAGCGGCCCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFFIFAC*ASGPRR
Trigger: TCTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAA...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000508482.5
CDS-3UTR CCA 90 bp GTTCTGCTGATCAAACACTCGCTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: VLLIKHSLLFSIPFCRLLNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...TAAAAGCCTGCAGAAGGGGATACTAAACAGAAGCGAGTGTTTGATCAGCAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCAATTGTCGACGTTGTaGACCTTAGCAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISQLSTL*TLAVLS
Trigger: AGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCCAATTGTCGACGTTGTaGACCTTAGCAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRQLSTL*TLAVLS
Trigger: AGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTTTCTGATCGATCATaGCTTCTGCTTCTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLSDRS*LLLLRR
Trigger: TCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTATTCCTACATACCTATaGCTGACTGCAAATTCTCCT +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTIPTYL*LTANSP
Trigger: AGGAGAATTTGCAGTCAGCCATAGGTATGTAGGAAT...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTTGGATTCTTGTGAGCTaGTTAGCAACAATCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLIWILVS*LATISS
Trigger: GGAACTGATTGTTGCTAACCAGCTCACAAGAATCCA...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp AAAATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTTTTTCACACGGACCTaGTGCCTCCAAATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KISLIANFHETRALLILFFFTRT*CLQILS
Trigger: GCTCAGGATTTGGAGGCACCAGGTCCGTGTGAAAAA...AAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTT
42% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504563.6
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCAGAACGTGTATTTGTaGACAATTCCGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISQNVYL*TIPQDK
Trigger: TTTGTCCTGCGGAATTGTTCACAAATACACGTTCTG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR TCA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCATCTTTCTCTACTTCGTaGCCTTTTGTGGTCCCGAGA +
Preference number: 4 (lower is better)
Translates to: NFSMATILQMWAIISKEASFSTS*PFVVPR
Trigger: TCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGA...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR TCA 90 bp TTTGTTTCTTCTAGTGAACTGGTCTCAATACTGGATTCTTGTGAGCTGGTTAGCACACTTACCTCTGTCTaGTCTGAGGTCTTATCAGAT +
Preference number: 4 (lower is better)
Translates to: FVSSSELVSILDSCELVSTLTSV*SEVLSD
Trigger: ATCTGATAAGACCTCAGATCAGACAGAGGTAAGTGT...GCTAACCAGCTCACAAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTTGACAGCCTGTTTTTaGCTTTCATTGAAATGGAAC +
Preference number: 4 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTLTACF*LSLKWN
Trigger: GTTCCATTTCAATGAAAGTCAAAAACAGGCTGTCAA...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACAATCGATCATGGCTTCTaGTTCTTCGTCGATCTCTAC +
Preference number: 4 (lower is better)
Translates to: LFNGDYITNVGDNFQRGTIDHGF*FFVDLY
Trigger: GTAGAGATCGACGAAGAAGCAGAAGCCATGATCGAT...TGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR GCA 90 bp AAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATCGACTTTTGCTCCTGTaGTTATATGACTTTCGATCC +
Preference number: 4 (lower is better)
Translates to: KRLLYVFLLGLVPSSSVHRLLLL*LYDFRS
Trigger: GGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCG...ATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR GCA 90 bp AAACTTCCATTTGTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGCTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: KLPFVFLVQQSFQLSTLWLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...CCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAACAAATGGAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR GCA 90 bp GGCAATAGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTTTAAGACCAACTGATTaGAGATTCCAAACTTACCAA +
Preference number: 4 (lower is better)
Translates to: GNSIQTWMWVEKGVPGMSLRPTD*RFQTYQ
Trigger: TTGGTAAGTTTGGAATCTGCAATCAGTTGGTCTTAA...ACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCTATTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGCCTATTACACACAAATaGTTAAATCCATCCCCTGGT +
Preference number: 4 (lower is better)
Translates to: QSNATGSRVTEQTALECKPITHK*LNPSPG
Trigger: ACCAGGGGATGGATTTAAGCATTTGTGTGTAATAGG...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp TTTGTTTCTTCTAGTGAACTGGTCTCAATACTGGATTCTTGTGAGCTGGTTAGCGTTCACATACACAGCTaGAGTTCAGTTTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: FVSSSELVSILDSCELVSVHIHS*SSVSLL
Trigger: CAGAAGTGAAACTGAACTGCAGCTGTGTATGTGAAC...GCTAACCAGCTCACAAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp TCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGTATCAGAGAAAGGAGTACCTaGCATGAGTACCTGCTTAGT +
Preference number: 4 (lower is better)
Translates to: SQIEGVCPCYSHCCFKCIRERST*HEYLLS
Trigger: ACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT...GATACATTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAAATAGCATTCAAACATaGATGTGGGTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLNSIQT*MWVEKG
Trigger: TCCTTTCTCTACCCACATCCATGTTTGAATGCTATT...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CCA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAATTTCTTCTAGTGAACTaGTCTCAATACTGGATTCTT +
Preference number: 4 (lower is better)
Translates to: QRGTLMGARVCYKIAETKFLLVN*SQYWIL
Trigger: AAGAATCCAGTATTGAGACCAGTTCACTAGAAGAAA...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTACTTTAATCAGAAGGTaGCTGAGCTCAACCAATATG +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLITLIRR*LSSTNM
Trigger: CATATTGGTTGAGCTCAGCCACCTTCTGATTAAAGT...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACAGAACGTGTATTTGTaGACAATTCCGCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LFNGDYITNVGDNFQRGTQNVYL*TIPQDK
Trigger: TTTGTCCTGCGGAATTGTTCACAAATACACGTTCTG...TGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp CCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTAGTATCACTTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PSDLMSSLVPLTSFLVSLHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...AAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTTGCAATTAAACACTaGGCAAGCCACATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLAIKH*ASHMFK
Trigger: CTTAAACATGTGGCTTGCTCAGTGTTTAATTGCAAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTAAATCCCACTTAGTCTaGTTCACACGAATACTAACG +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISKSHLV*FTRILT
Trigger: CGTTAGTATTCGTGTGAATCAGACTAAGTGGGATTT...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR TCA 90 bp TTTGATCTTCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCACTGCTACAAAATAGCTaGGACAAAACAATGTACCTC +
Preference number: 4 (lower is better)
Translates to: FDLLRSRLRDLCFLSDRSLLQNS*DKTMYL
Trigger: GAGGTACATTGTTTTGTCTCAGCTATTTTGTAGCAG...TGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAGATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR TCA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGTTTGATTTCACAAATTaGAGGTGTCTGTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: QSNATGSRVTEQTALECKFDFTN*RCLSLL
Trigger: TAGCAAGGACAGACACCTTCAATTTGTGAAATCAAA...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAAGTTACAGAACAAACTaGATTAGAATGCAAGGCAAT +
Preference number: 4 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLSYRTN*IRMQGN
Trigger: ATTGCCTTGCATTCTAATGCAGTTTGTTCTGTAACT...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TCACCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTAGTATCATTCCATCTTCATCTGTaGATACTTACGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: SPSDLMSSLVPLTSFLVSFHLHL*ILTLHC
Trigger: ACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAA...TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR GCA 90 bp CCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTAGATTTTCATCATTTAGTATCCCCTTCTaGAGGCTTTTAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PTFMKRELFSYCFRRFSSFSIPF*RLLGYR
Trigger: CCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA...TGATGAAAATCTACGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CCA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CCA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ISLIANFHETRALLILFSNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
CDS-3UTR CCA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTAATAGCATTCAAACATaGATGTGGGTAGAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RERSTWHEYLLSLTESLINSIQT*MWVEKG
Trigger: TCCTTTCTCTACCCACATCCATGTTTGAATGCTATT...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CCA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCAACTGGTCTCAATACTaGATTCTTGTGAGCTGGTTA +
Preference number: 4 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRNWSQY*ILVSWL
Trigger: TAACCAGCTCACAAGAATCCAGTATTGAGACCAGTT...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
3UTR CAA 72 bp GTGTCACCTTCAGATTTAATGTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCACTTTCCTTCGATTCA +
Preference number: 4 (lower is better)
Translates to: VSPSDLMSSLVP*TSFLVSLSFDS
Trigger: TGAATCGAAGGAAAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGGTGACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR TCA 90 bp GTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCAAACAGTAACAAAAAGTGTTTCAACCCAAACTaGAAAATGAATGGACTGTGT +
Preference number: 4 (lower is better)
Translates to: VPSSSVHTYAALSNSNKKCFNPN*KMNGLC
Trigger: ACACAGTCCATTCATTTTTCAGTTTGGGTTGAAACA...CTTTTTGTTACTGTTTGACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAACTCTGTCCCGACTTTTaGTCCTGTGCTTATATGACT +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKLCPDF*SCAYMT
Trigger: AGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAG...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAATTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGAC +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKFVSSL*FSRLPD
Trigger: GTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAA...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR GCA 90 bp TCCTACACAGTAGGAAATATTAAGCACATACCTCTTATAGACTTGAGAATTGCATTTGTGTCTTCACTCTaGTTTTCTCGACTACCGGAC +
Preference number: 4 (lower is better)
Translates to: SYTVGNIKHIPLIDLRIAFVSSL*FSRLPD
Trigger: GTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAA...TGCAATTCTCAAGTCTATAAGAGGTATGTGCTTAATATTTCCTACTGTGTAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAACAATTGTCGACGTTGTaGACCTTAGCAGTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKQLSTL*TLAVLS
Trigger: AGAGAGAACTGCTAAGGTCCACAACGTCGACAATTG...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CCA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGGTGGAATTCCACTGTTaGAATATACCACAGTATTTA +
Preference number: 4 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVVEFHC*NIPQYL
Trigger: TAAATACTGTGGTATATTCCAACAGTGGAATTCCAC...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR TCA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTCATAGCCAACTTTCATaGAACGAGAGCTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFHSQLS*NESSSH
Trigger: ATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATG...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000508482.5
CDS-3UTR TCA 90 bp TTAAAGCATATGTCTCTGCCAATGTACCAACACAAGATGGACTTAATACCAAAATCTGTGTTTTCTTTCTaGTCGATCATGGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LKHMSLPMYQHKMDLIPKSVFSF*SIMASA
Trigger: AGCAGAAGCCATGATCGATCAGAAAGAAAACACAGA...TTTTGGTATTAAGTCCATCTTGTGTTGGTACATTGGCAGAGACATATGCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR TCA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCAACCAAGCAATCTGATTaGTTAAAACTGGTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NFSMATILQMWAIISKEATKQSD*LKLVCS
Trigger: GGAGCAAACCAGTTTTAATCAATCAGATTGCTTGGT...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR GCA 90 bp TTGATTTCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGCTATTCACACTGCTaGTTTAAATGTATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LISQIEGVCPCYSHCCFKCYSHC*FKCISQ
Trigger: CTGGCTGATACATTTAAAGCAGCAGTGTGAATAGCA...TTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGAAATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CCA 90 bp AAAATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTAATTTCATCATCCCCTaGGCTTCTTCTACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KISLIANFHETRALLILFNFIIP*ASSTFP
Trigger: AGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATT...AAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
CDS-3UTR CCA 90 bp TCCTACACAGTAGGAAATATTAAGCACATACCTCTTATAGACTTGAGAATTGCATCAGTTTCACTTCTGTaGAATTCCACTGTTGGAATA +
Preference number: 4 (lower is better)
Translates to: SYTVGNIKHIPLIDLRIASVSLL*NSTVGI
Trigger: TATTCCAACAGTGGAATTCCACAGAAGTGAAACTGA...TGCAATTCTCAAGTCTATAAGAGGTATGTGCTTAATATTTCCTACTGTGTAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS CCA 90 bp GGTCCCGGCCCATTAACTCATCCAACAACTGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCTGTTCCCACCAGCCCAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: GPGPLTHPTTARPKS*CFLRAAVPTSPGTR
Trigger: GCGGGTGCCTGGGCTGGTGGGAACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 90 bp CCCGGCCCATTAACTCATCCAACAACTGCGCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTTCCCACCAGCCCAGGCACCCGCCAA +
Preference number: 5 (lower is better)
Translates to: PGPLTHPTTARPKSW*FLRAAVPTSPGTRQ
Trigger: TTGGCGGGTGCCTGGGCTGGTGGGAACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 90 bp CGCAAGTGCTGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTAACT +
Preference number: 5 (lower is better)
Translates to: RKCCLLSSRGPTARC*ASRPGLGFGPGPLT
Trigger: AGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCAGCACTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS GCA 90 bp CTTCGCAAGTGCTGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTA +
Preference number: 5 (lower is better)
Translates to: LRKCCLLSSRGPTAR*CASRPGLGFGPGPL
Trigger: TAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCAGCACTTGCGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS GCA 90 bp TCCGGGGCTAGGTTTCGGTCCCGGCCCATTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTGCTTCCTTCGGGCGGCTGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SGARFRSRPINSSNN*AAEIMVLPSGGCSH
Trigger: GTGGGAACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACCGAAACCTAGCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 90 bp TATGGCAAAACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTAACT +
Preference number: 5 (lower is better)
Translates to: YGKTLSSSRGPTARC*ASRPGLGFGPGPLT
Trigger: AGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS GCA 90 bp CAATATGGCAAAACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTA +
Preference number: 5 (lower is better)
Translates to: QYGKTLSSSRGPTAR*CASRPGLGFGPGPL
Trigger: TAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTTGCCATATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS-3UTR CAA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQWSHRT*LRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCA...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFWSHRT*LRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCA...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS GCA 90 bp CACAGAGATAATATTTACAAACGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTA +
Preference number: 5 (lower is better)
Translates to: HRDNIYKRSRGPTAR*CASRPGLGFGPGPL
Trigger: TAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATTATCTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000509335.5
ENST00000625349.2
CDS GCA 90 bp AGAGATAATATTTACAAACGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATTAACT +
Preference number: 5 (lower is better)
Translates to: RDNIYKRSRGPTARC*ASRPGLGFGPGPLT
Trigger: AGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATTATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000509335.5
ENST00000625349.2
CDS-3UTR CAA 90 bp TCACATACACAGCTGCAGTTCAGTTTCACTTCTGTGGAATTCCACTGTTGGAATTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SHTQLQFSFTSVEFHCWNWSHRT*LRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCA...ATTCCAACAGTGGAATTCCACAGAAGTGAAACTGAACTGCAGCTGTGTATGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACCTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: SFLVGKSSLCALWASPVHLLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...GTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CAA 90 bp GCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACTCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: AALVGKSSLCALWASPVHSLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...GTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp TTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACAGGTAGCGGAAGAGTCGTCTTGTaGTCCCGTAGAGGACTAGTA +
Preference number: 5 (lower is better)
Translates to: LWESPPFVPYGLLRCTGSGRVVL*SRRGLV
Trigger: TACTAGTCCTCTACGGGACAACAAGACGACTCTTCC...GCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
CDS-3UTR CAA 90 bp CTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGGGAAGAGTCGTCTTGTaGTCCCGTAGAGGACTAGTA +
Preference number: 5 (lower is better)
Translates to: LTLHLWESPPFVPYGLLRGRVVL*SRRGLV
Trigger: TACTAGTCCTCTACGGGACAACAAGACGACTCTTCC...CCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS GCA 90 bp CACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTaGACAGGTAGCTTCAATGAGGAAGAGTCGTCTTGTTGTCCCGTA +
Preference number: 5 (lower is better)
Translates to: HLWESPPFVPYGLLR*TGSFNEEESSCCPV
Trigger: TACGGGACAACAAGACGACTCTTCCTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISWSHRT*LRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTCTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSLHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR CAA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTTCTGCTCTGTTGCGTTaGCTGCTACTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFASALLR*LLLLHP
Trigger: TGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGA...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS GCA 90 bp ATCTGTGCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGTGCACAGGTAGCTTCAATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ICAYLRCTCGKVLPL*LMGFSGAQVASMRK
Trigger: CTTCCTCATTGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGCACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGCTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: GRERSTWHEYLLSLTESLLHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CCTCTTTTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: PLFLWESPPFVPYGLLRCGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...GCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAAAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CAA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTTCTGCTCTGTTGCGTTaGCTGCTACTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LQILSLSRVLLIKHSLLFSALLR*LLLLHP
Trigger: TGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGA...AAACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTACTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLLHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp TGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTAGTCAGTTTCAATTGTCGACGTaGTGGACCTTAGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: WLFMGRSQHQRCVRYGSQFQLST*WTLAVL
Trigger: GAGAACTGCTAAGGTCCACAACGTCGACAATTGAAA...CTGACTACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAACTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: QRGTLMGARVCYKIAETKLLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp TCCAGAGGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCTTTTATGAGAAAGTGTaGGCCCAGTCACTAACTGCT +
Preference number: 5 (lower is better)
Translates to: SRGEDVLSSRLVGPLERLFYEKV*AQSLTA
Trigger: AGCAGTTAGTGACTGGGCCAACACTTTCTCATAAAA...GAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCCTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp CTTCTGTTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTTCTGCTCTGTTGCGTTaGCTGCTACTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: LLFSIPFCRLLGYRLLCSSALLR*LLLLHP
Trigger: TGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGA...AGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAACAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTT +
Preference number: 5 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFALLGYR*LCSVAF
Trigger: AAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAG...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp TTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTGTGGGAGGGAAAGTCCTCCCTTaGTGCCTTATGGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLGLVPSSSVHTYAALVGGKVLP*CLMGFS
Trigger: GGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCC...TCCCACAAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFWSHRT*LRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCA...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000508482.5
CDS-3UTR CAA 90 bp GTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: VGRERSTWHEYLLSLTESFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...GGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp TTCTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCTTCTCCGGTGCACAGGTTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: FLWESPPFVPYGLLRCTGSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...ACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS-3UTR CAA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAGACTGGTCGGTCCTCTaGAAAGGCTCAATGAAAATT +
Preference number: 5 (lower is better)
Translates to: TSSSEDPCALMITSPSIKDWSVL*KGSMKI
Trigger: AATTTTCATTGAGCCTTTCAAGAGGACCGACCAGTC...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS GCA 90 bp CTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTaGTACTCCTCCATCCACTTGTCATCTTCCAAAAATTTGCTGACA +
Preference number: 5 (lower is better)
Translates to: LQAFRVQVALLCCVC*YSSIHLSSSKNLLT
Trigger: TGTCAGCAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS GCA 90 bp CTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTaGTGCTACTCCTCCATCCACTTGTCATCTTCCAAAAATTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLQAFRVQVALLCCV*CYSSIHLSSSKNLL
Trigger: CAGCAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTCTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: RERSTWHEYLLSLTESLILLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVLLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAATTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: QRGTLMGARVCYKIAETKFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp GGAGAGGATGTCTTGAGCAGCAGACTGGTCGGTCCTCTTGAAAGGCTCAATGAACCCACTTATACCAAATaGTTTCCCGTTTCCCAAAGT +
Preference number: 5 (lower is better)
Translates to: GEDVLSSRLVGPLERLNEPTYTK*FPVSQS
Trigger: ACTTTGGGAAACGGGAAACAATTTGGTATAAGTGGG...TTCATTGAGCCTTTCAAGAGGACCGACCAGTCTGCTGCTCAAGACATCCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp CAGAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGGGGAAAGTCCTCCCTTaGTGCCTTATGGGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QKRLLYVFLLGLVPSSSVGKVLP*CLMGFS
Trigger: GGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCC...CACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000509487.1
CDS-3UTR CAA 90 bp TCCTTCGATTCAGTGTTTGTGTCTTCACTCTGCTTTTCTCGACTACCGGACTTCTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: SFDSVFVSSLCFSRLPDFCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...GAAGTCCGGTAGTCGAGAAAAGCAGAGTGAAGACACAAACACTGAATCGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504065.5
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISLLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp AACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGTCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: NMDVGRERSTWHEYLLSLSLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...CAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp TGTGCATACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTGCCTTATGGGCGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: CAYLRCTCGKVLPLCLMGVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...GCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp ATCCCCTTCTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTTACTCCTCCATCCACTaGTCATCTTCCAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: IPFCRLLGYRLLCSVAFAYSSIH*SSSKNL
Trigger: CAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTA...AGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp CCTCCAAATCCTGAGCCTGTCCAGGGTTCTGCTGATCAAACACTCGCTTCTGTTTACTCCTCCATCCACTaGTCATCTTCCAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: PPNPEPVQGSADQTLASVYSSIH*SSSKNL
Trigger: CAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTA...AACAGAAGCGAGTGTTTGATCAGCAGAACCCTGGACAGGCTCAGGATTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS TCA 90 bp ACAAAGACTGAATTGACTTCACTTACCCCAGAAGACTGCTGGTTTTaGGATAATGCCAAACGAGCATGGCCTCGTCTGATCCTACGTTCT +
Preference number: 5 (lower is better)
Translates to: TKTELTSLTPEDCWF*DNAKRAWPRLILRS
Trigger: AGAACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATTATCTCAAAACCAGCAGTCTTCTGGGGTAAGTGAAGTCAATTCAGTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508218.5
CDS-3UTR CAA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NFSMATILQMWAIISKEALHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CAA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGTTTCAATTGTCGACGTaGTGGACCTTAGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: GRERSTWHEYLLSLTESLFQLST*WTLAVL
Trigger: GAGAACTGCTAAGGTCCACAACGTCGACAATTGAAA...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTTTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...AAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp CTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACTACTTCGTGACCTTTaGTGGTCCCGAGACCTGCTG +
Preference number: 5 (lower is better)
Translates to: LFNGDYITNVGDNFQRGTLLRDL*WSRDLL
Trigger: CAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAG...TGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: RERSTWHEYLLSLTESLIFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: EEAFVCLLTRLSSIFICAFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp AGCATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTCCTTGATTTTTAATTaGGCTTTTCATGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SIQTWMWVEKGVPGMSTCSLIFN*AFHGPL
Trigger: GAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGA...GCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAAGAGTACCTGCTTAGTTaGACTGAATCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: TSSSEDPCALMITSPSIKEYLLS*TESLIF
Trigger: AAAAATCAAGGATTCAGTCAAACTAAGCAGGTACTC...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTCCAGCTAAAGAGTGCTaGTCAGGATACTTGGAATTT +
Preference number: 5 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGPAKEC*SGYLEF
Trigger: AAATTCCAAGTATCCTGACAAGCACTCTTTAGCTGG...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp ACCAGTTCTTCTGAAGACCCCTGTGCCCTCATGATCACCTCTCCCTCCATCAAATTGATCCTTCTATTGTaGAGTTTTGTCCATGTTCAC +
Preference number: 5 (lower is better)
Translates to: TSSSEDPCALMITSPSIKLILLL*SFVHVH
Trigger: GTGAACATGGACAAAACTCAACAATAGAAGGATCAA...TTTGATGGAGGGAGAGGTGATCATGAGGGCACAGGGGTCTTCAGAAGAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTATACTTACGCTGCACTaGTGGGAAAGTCCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTILTLH*WESPPF
Trigger: AAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTAT...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS-3UTR CAA 90 bp TCTTCTTTTAATTGCTCAACTAATTTCATCATCCCCTGGGCTTCTTCTACTTTTCTTCATTTTTGCCTGTaGGGCCAGCGGCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: SSFNCSTNFIIPWASSTFLHFCL*GQRPQK
Trigger: CTTCTGGGGCCGCTGGCCCAACAGGCAAAAATGAAG...AAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGCAATTAAAAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000507200.5
ENST00000508045.5
ENST00000508482.5
CDS-3UTR CAA 90 bp CACTTTAAGTCCTTTGCTGCTACAACCACAATGCTGTCAAACTACACAAAGCAGGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: HFKSFAATTTMLSNYTKQGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...CTGCTTTGTGTAGTTTGACAGCATTGTGGTTGTAGCAGCAAAGGACTTAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp GACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACACTAATGGGGGCAGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: DYITNVGDNFQRGTLMGAGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...TGCCCCCATTAGTGTGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp TTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTTCGATCCCGGCTTTTaGATCTTCTTCGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: FVCLLTRLSSIFICAYLRFDPGF*IFFDPD
Trigger: GTCGGGATCGAAGAAGATCAAAAAGCCGGGATCGAA...GCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGTCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: QSNATGSRVTEQTALECKSLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: EEAFVCLLTRLSSIFICASLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: GRERSTWHEYLLSLTESLPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGTCCTTGATTTTTAATTaGGCTTTTCATGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: GRERSTWHEYLLSLTESLSLIFN*AFHGPL
Trigger: GAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGA...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp GTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGATCACTTTAAGTCCTTaGCTGCTACAACCACAATGC +
Preference number: 5 (lower is better)
Translates to: VFLLGLVPSSSVHTYAALITLSP*LLQPQC
Trigger: GCATTGTGGTTGTAGCAGCAAAGGACTTAAAGTGAT...CAGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp GTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGACCTTAGCAGTTTTTCAATTGTCGACGTaGTGGACCTTAGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: VFLVQQSFQLSTLWTLAVFQLST*WTLAVL
Trigger: GAGAACTGCTAAGGTCCACAACGTCGACAATTGAAA...AACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508045.5
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISSLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CAA 90 bp CTTCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATGGCTTTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: LLRSRLRDLCFLSDRSWLSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...AAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAGAGGCACACTAATGGGGGCACGAGTCTGCTACAAAATAGCTGAGACAAAAGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: QRGTLMGARVCYKIAETKVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...TTTTGTCTCAGCTATTTTGTAGCAGACTCGTGCCCCCATTAGTGTGCCTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp GGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGGACTTGAGAATTGCATaGAGTGTAACAAGGCGAATA +
Preference number: 5 (lower is better)
Translates to: GRERSTWHEYLLSLTESLDLRIA*SVTRRI
Trigger: TATTCGCCTTGTTACACTCAATGCAATTCTCAAGTC...CAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TTAATTTGGCTTTTCATGGGCCGCTCACAACACCAACGCTGTGTGAGGTATGGTACAGCTGGGTTAATCTaGATACAGGACTTAACAAAA +
Preference number: 5 (lower is better)
Translates to: LIWLFMGRSQHQRCVRYGTAGLI*IQDLTK
Trigger: TTTTGTTAAGTCCTGTATCAAGATTAACCCAGCTGT...ACCATACCTCACACAGCGTTGGTGTTGTGAGCGGCCCATGAAAAGCCAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp GAAGAGGCTTTTGTATGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATTATCCAACACACTGTaGGTGGACACTTGGGATCTT +
Preference number: 5 (lower is better)
Translates to: EEAFVCLLTRLSSIFICALSNTL*VDTWDL
Trigger: AAGATCCCAAGTGTCCACCAACAGTGTGTTGGATAA...TGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACATACAAAAGCCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp AAAATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCTGCTCTGTTGCGTTaGCTGCTACTCCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: KISLIANFHETRALLILFSALLR*LLLLHP
Trigger: TGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGA...AAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504563.6
ENST00000508045.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTTTCAATTGTCGACGTaGTGGACCTTAGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISFQLST*WTLAVL
Trigger: GAGAACTGCTAAGGTCCACAACGTCGACAATTGAAA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp TTTGATCTTCTTCGATCCCGACTTCGAGATCTGTGTTTTCTTTCTGATCGATCATTTCAATTGTCGACGTaGTGGACCTTAGCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: FDLLRSRLRDLCFLSDRSFQLST*WTLAVL
Trigger: GAGAACTGCTAAGGTCCACAACGTCGACAATTGAAA...TGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGAAGAAGATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CAA 90 bp CAATCCAATGCTACTGGCTCTCGAGTTACAGAACAAACTGCATTAGAATGCAAGTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: QSNATGSRVTEQTALECKSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...CTTGCATTCTAATGCAGTTTGTTCTGTAACTCGAGAGCCAGTAGCATTGGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp CACTTTAAGTCCTTTGCTGCTACAACCACAATGCTGTCAAACTACACAAAGCAGTTCATTAGGAATATTTaGTCCCACACCACTAGCCCA +
Preference number: 5 (lower is better)
Translates to: HFKSFAATTTMLSNYTKQFIRNI*SHTTSP
Trigger: TGGGCTAGTGGTGTGGGACAAAATATTCCTAATGAA...CTGCTTTGTGTAGTTTGACAGCATTGTGGTTGTAGCAGCAAAGGACTTAAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TGTCTTCTTACTCGGCTTAGTTCCATCTTCATCTGTGCATACTTACGCTGCACTGCCTGGGAGCTATCTTaGTGTTTGTTAGATTTTACT +
Preference number: 5 (lower is better)
Translates to: CLLTRLSSIFICAYLRCTAWELS*CLLDFT
Trigger: AGTAAAATCTAACAAACACAAAGATAGCTCCCAGGC...AGTGCAGCGTAAGTATGCACAGATGAAGATGGAACTAAGCCGAGTAAGAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp AAACTTCCATTTGTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACGTTGTGGCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTT +
Preference number: 5 (lower is better)
Translates to: KLPFVFLVQQSFQLSTLWLLGYR*LCSVAF
Trigger: AAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAG...CCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAAACAAATGGAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CAA 90 bp CCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTAGTATCACTTAGATCCCCTCTTTTCTaGTGGGAAAGTCCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: PSDLMSSLVPLTSFLVSLRSPLF*WESPPF
Trigger: AAAGGGAGGACTTTCCCACAAGAAAAGAGGGGATCT...AAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS GCA 90 bp TTACAAACCATTACAAATAAATGGTCGATGATTTTGCATCACAGATaGATCCTTCACTTGAAACTGCGCTTCGCAAGTGCTGCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LQTITNKWSMILHHR*ILHLKLRFASAACS
Trigger: TGAGCAAGCAGCACTTGCGAAGCGCAGTTTCAAGTGAAGGATGCATCTGTGATGCAAAATCATCGACCATTTATTTGTAATGGTTTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS-3UTR CAA 90 bp AAAATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTGGCATAGCCCATGTGTaGTTTTCCCATCAAATGGTC +
Preference number: 5 (lower is better)
Translates to: KISLIANFHETRALLILFGIAHV*FSHQMV
Trigger: GACCATTTGATGGGAAAACAACACATGGGCTATGCC...AAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CAA 90 bp TTGATTTCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: LISQIEGVCPCYSHCCFKCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...TTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGAAATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp ACTTCACAAACTTCCATTTGTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACTGTCTGATGTTCGGCTaGAGTGTCTACTTCGTGAAC +
Preference number: 5 (lower is better)
Translates to: TSQTSICFSCAAKLSIVDCLMFG*SVYFVN
Trigger: GTTCACGAAGTAGACACTCAAGCCGAACATCAGACA...GTCGACAATTGAAAGCTTTGCTGCACAAGAAAAACAAATGGAAGTTTGTGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CAA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCATCTCTGTCCCGACTTTaGCTCCTGTGCTTATATGAC +
Preference number: 5 (lower is better)
Translates to: NFSMATILQMWAIISKEASLSRL*LLCLYD
Trigger: GTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGA...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505658.6
ENST00000508482.5
ENST00000509487.1
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp CCCTTCAGATTTAATGTCTTCACTGGTCCCATTGACCTCATTCTTAGTATCACTCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: PFRFNVFTGPIDLILSITPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...AGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS-3UTR CAA 90 bp CAAAAATCTTCGAACAGTAGTCCTCTGTCTGATCTGAGGTCTTATCAGATCAGTTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: QKSSNSSPLSDLRSYQISSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...ACTGATCTGATAAGACCTCAGATCAGACAGAGGACTACTGTTCGAAGATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000240304.5
CDS-3UTR CAA 90 bp GTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCAAACAGTAACAAAAAGTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCA +
Preference number: 5 (lower is better)
Translates to: VPSSSVHTYAALSNSNKKSSLVP*TSFLVS
Trigger: TGATACTAAGAATGAGGTCAATGGGACCAGTGAAGA...CTTTTTGTTACTGTTTGACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000504065.5
ENST00000505658.6
ENST00000508482.5
CDS-3UTR CAA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTGTACCTCAAAATGTTTaGCAGGACTACACTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RERSTWHEYLLSLTESLIVPQNV*QDYTVF
Trigger: AAAGACAGTGTAGTCCTGCAAAACATTTTGAGGTAC...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393227.6
ENST00000505658.6
CDS-3UTR CAA 90 bp GTTCCATCTTCATCTGTGCATACTTACGCTGCACTGTCAAACAGTAACAAAAAGTCCTTGATTTTTAATTaGGCTTTTCATGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: VPSSSVHTYAALSNSNKKSLIFN*AFHGPL
Trigger: GAGCGGCCCATGAAAAGCCAAATTAAAAATCAAGGA...CTTTTTGTTACTGTTTGACAGTGCAGCGTAAGTATGCACAGATGAAGATGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGAGTACCTGCTTAGTTaGACTGAATCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLEYLLS*TESLIF
Trigger: AAAAATCAAGGATTCAGTCAAACTAAGCAGGTACTC...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp ATTCAAACATGGATGTGGGTAGAGAAAGGAGTACCTGGCATGAGTACCTGCTTATGTGGAATTCCACTGTaGGAATATACCACAGTATTT +
Preference number: 5 (lower is better)
Translates to: IQTWMWVEKGVPGMSTCLCGIPL*EYTTVF
Trigger: AAATACTGTGGTATATTCCAACAGTGGAATTCCACA...TAAGCAGGTACTCATGCCAGGTACTCCTTTCTCTACCCACATCCATGTTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp TCACAAATTGAAGGTGTCTGTCCTTGCTATTCACACTGCTGCTTTAAATGTATCCCTTCGATTCAGTGTTaGTGTCTTCACTCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SQIEGVCPCYSHCCFKCIPSIQC*CLHSAF
Trigger: AAAAGCAGAGTGAAGACACAAACACTGAATCGAAGG...GATACATTTAAAGCAGCAGTGTGAATAGCAAGGACAGACACCTTCAATTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp AGAGAAAGGAGTACCTGGCATGAGTACCTGCTTAGTTTGACTGAATCCTTGATTGAGTACCTGCTTAGTTaGACTGAATCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: RERSTWHEYLLSLTESLIEYLLS*TESLIF
Trigger: AAAAATCAAGGATTCAGTCAAACTAAGCAGGTACTC...AATCAAGGATTCAGTCAAACTAAGCAGGTACTCATGCCAGGTACTCCTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000505658.6
ENST00000511974.5
CDS-3UTR CAA 90 bp ATCTCTCTCATAGCCAACTTTCATGAAACGAGAGCTCTTCTCATACTGTTTTCGTACTCCTCCATCCACTaGTCATCTTCCAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: ISLIANFHETRALLILFSYSSIH*SSSKNL
Trigger: CAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTA...CGAAAACAGTATGAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504563.6
ENST00000508045.5
ENST00000509335.5
CDS-3UTR CAA 90 bp AACTTTTCAATGGCGACTATATTACAAATGTGGGCGATAATTTCCAAAGAGGCACCAACTAATAACTTTTaGGTCTGCATGGCAGAAATG +
Preference number: 5 (lower is better)
Translates to: NFSMATILQMWAIISKEAPTNNF*VCMAEM
Trigger: CATTTCTGCCATGCAGACCAAAAAGTTATTAGTTGG...TGCCTCTTTGGAAATTATCGCCCACATTTGTAATATAGTCGCCATTGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505658.6
CDS-3UTR CAA 90 bp ACTTCACAAACTTCCATTTGTTTTTCTTGTGCAGCAAAGCTTTCAATTGTCGACTACTCCTCCATCCACTaGTCATCTTCCAAAAATTTG +
Preference number: 5 (lower is better)
Translates to: TSQTSICFSCAAKLSIVDYSSIH*SSSKNL
Trigger: CAAATTTTTGGAAGATGACAAGTGGATGGAGGAGTA...GTCGACAATTGAAAGCTTTGCTGCACAAGAAAAACAAATGGAAGTTTGTGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508045.5
CDS-3UTR CAA 90 bp TTCTTAGTATCACTTTCCTTCGATTCAGTGTTTGTGTCTTCACTCTGCTTTTCTTTCTGCCCTTTCTCCTaGGATTTTCTATCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: FLVSLSFDSVFVSSLCFSFCPFS*DFLSCS
Trigger: AGAACAAGATAGAAAATCCAAGGAGAAAGGGCAGAA...AGAAAAGCAGAGTGAAGACACAAACACTGAATCGAAGGAAAGTGATACTAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504065.5
CDS GCA 72 bp ACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: TLSSSRGPTARC*ASRPGLGFGPG
Trigger: GCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS GCA 72 bp TCACACGGACGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: SHGRSRGPTARC*ASRPGLGFGPG
Trigger: GCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTCCGTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS GCA 72 bp TGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: CLLSSRGPTARC*ASRPGLGFGPG
Trigger: GCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS GCA 72 bp TGCTGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: CCLLSSRGPTAR*CASRPGLGFGP
Trigger: GGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS CAA 72 bp GTGCTGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: VLLAQLSWSHRT*LRFSSGARFRS
Trigger: GGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS CAA 90 bp GCTTCGCAAGTGCTGCTTGCTCAGCTCTCGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATT +
Preference number: 6 (lower is better)
Translates to: ASQVLLAQLSWSHRT*LRFSSGARFRSRPI
Trigger: AATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTGAGCAAGCAGCACTTGCGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS GCA 72 bp AAAACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: KTLSSSRGPTAR*CASRPGLGFGP
Trigger: GGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS GCA 72 bp TTTTCACACGGACGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: FSHGRSRGPTAR*CASRPGLGFGP
Trigger: GGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTCCGTGTGAAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS CCA 72 bp GCCTGGCCAATATGGCAAAACCCTGTCGAGCTCTCGTaGTCCCACCGCACGTTGCTGCGCTTCTCGTCCGGG +
Preference number: 6 (lower is better)
Translates to: AWPIWQNPVELS*SHRTLLRFSSG
Trigger: CCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTTGCCATATTGGCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS CAA 72 bp CAAAACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: QNPVELSWSHRT*LRFSSGARFRS
Trigger: GGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS CAA 90 bp CCAATATGGCAAAACCCTGTCGAGCTCTCGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGCCCATT +
Preference number: 6 (lower is better)
Translates to: PIWQNPVELSWSHRT*LRFSSGARFRSRPI
Trigger: AATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCTCGACAGGGTTTTGCCATATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505619.5
CDS GCA 72 bp ATTTACAAACGCTCTCGTGGTCCCACCGCACGTTGCTaGGCTTCTCGTCCGGGGCTAGGTTTCGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: IYKRSRGPTARC*ASRPGLGFGPG
Trigger: GCCGGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000509335.5
ENST00000625349.2
CDS CAA 72 bp TTTTTCACACGGACGCTCTCGTGGTCCCACCGCACGTaGCTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCC +
Preference number: 6 (lower is better)
Translates to: FFTRTLSWSHRT*LRFSSGARFRS
Trigger: GGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTCCGTGTGAAAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508482.5
CDS GCA 72 bp TTAACTCATCCAACAACTGCGCGGCCGAAATCATGGTaGTTCCTTCGGGCGGCTGTTCCCACCAGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LTHPTTARPKSW*FLRAAVPTSPG
Trigger: GCCTGGGCTGGTGGGAACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 72 bp AGGTTTCGGTCCCGGCCCATTAACTCATCCAACAACTaGGCGGCCGAAATCATGGTGCTTCCTTCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: RFRSRPINSSNN*AAEIMVLPSGG
Trigger: GCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACCGAAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 72 bp AATATTTACAAACGCTCTCGTGGTCCCACCGCACGTTaGTGCGCTTCTCGTCCGGGGCTAGGTTTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: NIYKRSRGPTAR*CASRPGLGFGP
Trigger: GGGACCGAAACCTAGCCCCGGACGAGAAGCGCAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000509335.5
ENST00000625349.2
CDS CCA 72 bp CCATTAACTCATCCAACAACTGCGCGGCCGAAATCATaGTGCTTCCTTCGGGCGGCTGTTCCCACCAGCCCA +
Preference number: 6 (lower is better)
Translates to: PLTHPTTARPKS*CFLRAAVPTSP
Trigger: TGGGCTGGTGGGAACAGCCGCCCGAAGGAAGCACCATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000240304.5
ENST00000393227.6
ENST00000504563.6
ENST00000505619.5
ENST00000505658.6
ENST00000506686.5
ENST00000508045.5
ENST00000508218.5
ENST00000508482.5
ENST00000509335.5
ENST00000510984.5
ENST00000625349.2
CDS GCA 72 bp TACTTACGCTGCACTTGTGGGAAAGTCCTCCCTTTGTaGCTTATGGGCTTCTCCGGTGCACAGGTAGCTTCA +
Preference number: 6 (lower is better)
Translates to: YLRCTCGKVLPL*LMGFSGAQVAS
Trigger: TGAAGCTACCTGTGCACCGGAGAAGCCCATAAGGCACAAAGGGAGGACTTTCCCACAAGTGCAGCGTAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509487.1
CDS GCA 72 bp CTGCAGGCTTTTAGGGTACAGGTTGCTCTGCTCTGTTaGGTTTGCTGCTACTCCTCCATCCACTTGTCATCT +
Preference number: 6 (lower is better)
Translates to: LQAFRVQVALLC*VCCYSSIHLSS
Trigger: AGATGACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS CAA 72 bp TTTAGTATCCCCTTCTGCAGGCTTTTAGGGTACAGGTaGCTCTGCTCTGTTGCGTTTGCTGCTACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: FSIPFCRLLGYR*LCSVAFAATPP
Trigger: TGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGCCTGCAGAAGGGGATACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS GCA 72 bp GCTTTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTaGTGCTACTCCTCCATCCACTTGTCATCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: AFRVQVALLCCV*CYSSIHLSSSK
Trigger: TTTGGAAGATGACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS CAA 72 bp TGGTCGATGATTTTGCATCACAGATGCATCCTTCACTaGAAACTGCGCTTCGCAAGTGCTGCTTGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: WSMILHHRCILH*KLRFASAACSA
Trigger: AGCTGAGCAAGCAGCACTTGCGAAGCGCAGTTTCAAGTGAAGGATGCATCTGTGATGCAAAATCATCGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS CAA 90 bp ACAAATAAATGGTCGATGATTTTGCATCACAGATGCATCCTTCACTaGAAACTGCGCTTCGCAAGTGCTGCTTGCTCAGCTCTCGTGGTC +
Preference number: 6 (lower is better)
Translates to: TNKWSMILHHRCILH*KLRFASAACSALVV
Trigger: GACCACGAGAGCTGAGCAAGCAGCACTTGCGAAGCGCAGTTTCAAGTGAAGGATGCATCTGTGATGCAAAATCATCGACCATTTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS GCA 72 bp TTTAGGGTACAGGTTGCTCTGCTCTGTTGCGTTTGCTaGTACTCCTCCATCCACTTGTCATCTTCCAAAAAT +
Preference number: 6 (lower is better)
Translates to: FRVQVALLCCVC*YSSIHLSSSKN
Trigger: ATTTTTGGAAGATGACAAGTGGATGGAGGAGTAGCAGCAAACGCAACAGAGCAGAGCAACCTGTACCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504563.6
ENST00000506686.5
ENST00000508045.5
ENST00000509335.5
CDS CAA 72 bp CGCTGCACTTCAGATTTAATGTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCACTTTCCTTCGATTCA +
Preference number: 6 (lower is better)
Translates to: RCTSDLMSSLVP*TSFLVSLSFDS
Trigger: TGAATCGAAGGAAAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGTGCAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000503728.1
ENST00000513969.5
CDS CAA 90 bp GCATACTTACGCTGCACTTCAGATTTAATGTCTTCACTGGTCCCATaGACCTCATTCTTAGTATCACTTTCCTTCGATTCAGTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: AYLRCTSDLMSSLVP*TSFLVSLSFDSVFV
Trigger: CACAAACACTGAATCGAAGGAAAGTGATACTAAGAATGAGGTCAATGGGACCAGTGAAGACATTAAATCTGAAGTGCAGCGTAAGTATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393227.6
ENST00000503728.1
ENST00000513969.5
CDS GCA 72 bp ATTACAAATAAATGGTCGATGATTTTGCATCACAGATaGATCCTTCACTTGAAACTGCGCTTCGCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: ITNKWSMILHHR*ILHLKLRFASA
Trigger: AGCACTTGCGAAGCGCAGTTTCAAGTGAAGGATGCATCTGTGATGCAAAATCATCGACCATTTATTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510984.5
CDS TCA 72 bp GAATCCTCTTTTCTTCAAGATCAGAACGTGTATTTGTaGACAATTCCGCAGGACAAAAACCACAGAGATAAT +
Preference number: 6 (lower is better)
Translates to: ESSFLQDQNVYL*TIPQDKNHRDN
Trigger: ATTATCTCTGTGGTTTTTGTCCTGCGGAATTGTTCACAAATACACGTTCTGATCTTGAAGAAAAGAGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507200.5
CDS CAA 72 bp TATTTACAAACCATTACAAATAAATGGTCGATGATTTaGCATCACAGATGCATCCTTCACTTGAAACTGCGC +
Preference number: 6 (lower is better)
Translates to: YLQTITNKWSMI*HHRCILHLKLR
Trigger: GCGCAGTTTCAAGTGAAGGATGCATCTGTGATGCAAAATCATCGACCATTTATTTGTAATGGTTTGTAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510984.5