RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LUC7L (Homo sapiens)

Ensembl gene IDs: ENSG00000007392

Ensembl transcript IDs: ENST00000293872.13, ENST00000337351.8, ENST00000397780.5, ENST00000397783.5, ENST00000418978.5, ENST00000419516.5, ENST00000426094.5, ENST00000429378.5, ENST00000430864.5, ENST00000442701.1, ENST00000443357.5, ENST00000469109.1, ENST00000490762.5, ENST00000494545.1, ENST00000495349.5, ENST00000629543.2

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGAAGAGTTCTGCCACCCGGCTGCCAGCGACCTGGAGCCCACGCTaGTTCCAGCCCTCCGCCGACTCCACAGTTCGCGGAGGGGCACGG +
Preference number: 1 (lower is better)
Translates to: RKSSATRLPATWSPR*FQPSADSTVRGGAR
Trigger: CCGTGCCCCTCCGCGAACTGTGGAGTCGGCGGAGGGCTGGAATCAGCGTGGGCTCCAGGTCGCTGGCAGCCGGGTGGCAGAACTCTTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR GCA 90 bp CCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATT +
Preference number: 1 (lower is better)
Translates to: PGKPDDVPGCGSGNG*GGADVYLGTGTGTI
Trigger: AATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CCA 90 bp CCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACTCCTGGTTGCAGCTACCGAAGG +
Preference number: 1 (lower is better)
Translates to: PGALARSARSPRTPL*MPALWRTPGCSYRR
Trigger: CCTTCGGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR CCA 90 bp CGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCC +
Preference number: 1 (lower is better)
Translates to: RRPPSLLTSVKPSSR*SSQASSPGALARSA
Trigger: GGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR CCA 90 bp GAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGT +
Preference number: 1 (lower is better)
Translates to: EARRCPRLWLRERLR*RRCLSRDRDRDNFR
Trigger: ACGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR GCA 90 bp GGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCTGGGAAATGGGAACCAGAGGCTCAG +
Preference number: 1 (lower is better)
Translates to: GPSLAPPALPGLLSG*PLSGEPGKWEPEAQ
Trigger: CTGAGCCTCTGGTTCCCATTTCCCAGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR CCA 90 bp CCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACTTGTATTTCGCACTTCGGTCCC +
Preference number: 1 (lower is better)
Translates to: PGALARSARSPRTPL*MPALWRTCISHFGP
Trigger: GGGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR GCA 90 bp GCTCCCTCGGGTGTAGCTTCTTCCCAAGGAGCCTCGGAAGAGTTCTaGCACCCGGCTGCCAGCGACCTGGAGCCCACGCTGATTCCAGCC +
Preference number: 1 (lower is better)
Translates to: APSGVASSQGASEEF*HPAASDLEPTLIPA
Trigger: GGCTGGAATCAGCGTGGGCTCCAGGTCGCTGGCAGCCGGGTGGCAGAACTCTTCCGAGGCTCCTTGGGAAGAAGCTACACCCGAGGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR CCA 90 bp CGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCTCTaGAGAACCTGGGAAATGGGAACCAGAGGCTCAGTGGAGGCTGCT +
Preference number: 1 (lower is better)
Translates to: RSARSPRTPLWMPAL*RTWEMGTRGSVEAA
Trigger: AGCAGCCTCCACTGAGCCTCTGGTTCCCATTTCCCAGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR TCA 90 bp ACAGAGGTAAGCAGGGCCTGGTCAGGACACAAGTCTCAGCCACTCTaGGCATGGACGCAACAGTGCACAGGCCCCAGGACGCAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: TEVSRAWSGHKSQPL*AWTQQCTGPRTQAG
Trigger: CCCTGCCTGCGTCCTGGGGCCTGTGCACTGTTGCGTCCATGCTCAGAGTGGCTGAGACTTGTGTCCTGACCAGGCCCTGCTTACCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR GCA 90 bp GGGAGCGTGACCTCCTGCGATCTCTGGTTCTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGC +
Preference number: 1 (lower is better)
Translates to: GSVTSCDLWFLIPTS*SDAPPVPSPLSSSS
Trigger: GCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR TCA 90 bp ATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCATCTGTAAACTTGACCCTCTGTCTG +
Preference number: 1 (lower is better)
Translates to: MRVPARMSWGQQSRR*LLQTRSSVNLTLCL
Trigger: CAGACAGAGGGTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR GCA 90 bp TTCTGCCTTTGCAGAAACTTCCGCACTGATTTCCTCCTGTGTTTCTaGCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCAGC +
Preference number: 1 (lower is better)
Translates to: FCLCRNFRTDFLLCF*QPLLGELSSPITFS
Trigger: GCTGAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTGCAAAGGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CCA 90 bp TACTTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTaGTACATTCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCAT +
Preference number: 1 (lower is better)
Translates to: YLQSHNLLGGPSRGF*YILLNPCASQPGCH
Trigger: ATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR TCA 90 bp GCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATaGCCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAAACTCA +
Preference number: 1 (lower is better)
Translates to: AASGGSIRFIYSYST*PGNTGATLYTSRNS
Trigger: TGAGTTTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCGCCCTCAGCAGACCCTaGGAACACAGAGAAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLALSRP*EHREGL
Trigger: GAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAGGGC...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR GCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp TCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTGGATGCCCGCTCTCTaGAGAACTCCTGGTTGCAGC +
Preference number: 2 (lower is better)
Translates to: SRWSSQASSPGALARSARWMPAL*RTPGCS
Trigger: GCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCA...GCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR-3UTR CCA 90 bp CCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: PGCGSGNGCGGADVYLGTPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...GGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CAA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGC +
Preference number: 2 (lower is better)
Translates to: SPASFSSDLREAIFP*ELSSLQSGGPRSLR
Trigger: GCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR-3UTR GCA 90 bp GGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: GKPDDVPGCGSGNGCGGATPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...GGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp TGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: CPRLWLRERLRWRRCLSRGLTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC...CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR-3UTR CCA 90 bp ATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: IFPLELSSLQSGGPRSLRPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...GCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR-3UTR CCA 90 bp CGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 2 (lower is better)
Translates to: RSREARRCPRLWLRERLRRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...CCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp TGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 2 (lower is better)
Translates to: CGSGNGCGGADVYLGTGTNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...GGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp CGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 2 (lower is better)
Translates to: RSREARRCPRLWLRERLRSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...CCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACACCTGGAGCCCACGCTaGTTCCAGCCCTCCGCCGAC +
Preference number: 2 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDTWSPR*FQPSAD
Trigger: GTCGGCGGAGGGCTGGAATCAGCGTGGGCTCCAGGT...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR GCA 90 bp CTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGGTTCTGCCACCCGGCTaGCAGCGACCTGGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: LENLYFALRSREARRCPRVLPPG*QRPGAH
Trigger: GTGGGCTCCAGGTCGCTGGCAGCCGGGTGGCAGAAC...CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR CCA 90 bp GACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCGAGAGGAGCCCGACCTaGACCCACGGCCGCCTCAGA +
Preference number: 2 (lower is better)
Translates to: DNFRRSREVDLDRLRRRSERSPT*THGRLR
Trigger: TCTGAGGCGGCCGTGGGTCCAGGTCGGGCTCCTCTC...GGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR CCA 90 bp CTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCTGAAGCCCCATCCATaGCGCAGACTCCGAGAGAGG +
Preference number: 2 (lower is better)
Translates to: LREAIFPLELSSLQSGGPLKPHP*RRLRER
Trigger: CCTCTCTCGGAGTCTGCGCCATGGATGGGGCTTCAG...AGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR GCA 90 bp GCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: APGRRVQISPASFSSDLRGLTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC...ACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR GCA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCGCATGGACGCAACAGTaGACAGGCCCCAGGACGCAG +
Preference number: 2 (lower is better)
Translates to: SPASFSSDLREAIFPLELAWTQQ*TGPRTQ
Trigger: CTGCGTCCTGGGGCCTGTGCACTGTTGCGTCCATGC...GAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR GCA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 2 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp TTCTTGATCCCGACCTCCTGCTCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 2 (lower is better)
Translates to: FLIPTSCSDAPPVPSPLSATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...GGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp GCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGCTCTCTGGAGAACCTaGGAAATGGGAACCAGAGGC +
Preference number: 2 (lower is better)
Translates to: APGRRVQISPASFSSDLRALWRT*EMGTRG
Trigger: GCCTCTGGTTCCCATTTCCCAGGTTCTCCAGAGAGC...ACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR CCA 90 bp CTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: LENLYFALRSREARRCPRPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp ATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 2 (lower is better)
Translates to: IFPLELSSLQSGGPRSLRRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...GCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp CGGGACCGGGACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGGTTCCCCTTGCAATaGTACAGAACCAGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: RDRDNFRRSREVDLDRLRRFPLQ*YRTRAG
Trigger: GCCCGCTCTGGTTCTGTACCATTGCAAGGGGAACCG...TCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTCCCGGTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR TCA 90 bp TCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 2 (lower is better)
Translates to: SHFGPGKPDDVPGCGSGNTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp TTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCCATCACCTGGCGCCGTaGGAGCTCCTCCACAGCCCT +
Preference number: 2 (lower is better)
Translates to: FIRLFTAPGRRVQISPASHHLAP*ELLHSP
Trigger: AGGGCTGTGGAGGAGCTCGCACGGCGCCAGGTGATG...GGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR GCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 2 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp GCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: APGRRVQISPASFSSDLRKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...ACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR-3UTR CCA 90 bp CGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGTCGCTCTCGGGAGGTACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 2 (lower is better)
Translates to: RCLSRDRDRDNFRRSREVLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TACCTCCCGAGAGCGACGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CAA 90 bp GGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGG +
Preference number: 2 (lower is better)
Translates to: GLTPGCSYRRSQSSY*YFALRSREARRCPR
Trigger: CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR-3UTR TCA 90 bp CGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGAGAATGTGCCAGTGTaGACTTACAACTTCATTACT +
Preference number: 2 (lower is better)
Translates to: RLWLRERLRWRRCLSRDRENVPV*TYNFIT
Trigger: AGTAATGAAGTTGTAAGTTCACACTGGCACATTCTC...CCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR GCA 90 bp TATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCG +
Preference number: 2 (lower is better)
Translates to: YLQHPGDGFRSRRPPSLLGLLSG*PLSGEP
Trigger: CGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442701.1
3UTR-3UTR CCA 90 bp TCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SDAPPVPSPLSSSSDPDFPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...GAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 2 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 2 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCT +
Preference number: 2 (lower is better)
Translates to: ASFSSDLREAIFPLELSSGLLSG*PLSGEP
Trigger: AGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...GCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR GCA 90 bp CGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 2 (lower is better)
Translates to: RLWLRERLRWRRCLSRDRVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 2 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: SPASFSSDLREAIFPLELTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...GAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp TGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 2 (lower is better)
Translates to: CISHFGPGKPDDVPGCGSTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp ATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCAGGAAGTCGGGGGAATaGTACATAAAAGTAAAGGTA +
Preference number: 2 (lower is better)
Translates to: IFPLELSSLQSGGPRSLRRKSGE*YIKVKV
Trigger: TACCTTTACTTTTATGTATCATTCCCCCGACTTCCT...GCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR CCA 90 bp CGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGAGGTAAGCAGGGCCTaGTCAGGACACAAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: RPPSLLTSVKPSSRWSSQEVSRA*SGHKSQ
Trigger: CTGAGACTTGTGTCCTGACCAGGCCCTGCTTACCTC...TTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR CCA 90 bp AGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCTGAACAGACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 2 (lower is better)
Translates to: SGLPGDGHCHGDQGRLNRLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TCTGTTCAGCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp CGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAATGGAGAACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: RPPSLLTSVKPSSRWSSQWRTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCA...TTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR-3UTR TCA 90 bp GGACTCCTCTCTGGATGCCCGCTCTCTGGAGAACTTGTATTTCGCACTTCGGTCCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 2 (lower is better)
Translates to: GLLSGCPLSGELVFRTSVRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...GACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp AACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 2 (lower is better)
Translates to: NPKCNLPPKWSARRRSLSCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...TGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp CTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 2 (lower is better)
Translates to: LTSVKPSSRWSSQASSPGYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...CCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp TGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCACAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: CNLPPKWSARRRSLSWRPQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...TGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 2 (lower is better)
Translates to: ERLSDYLQHPGDGFRSRRCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...CCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 2 (lower is better)
Translates to: ATEVVCQATVIVMETKVGYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...GCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CAA 90 bp GAAACTTCCGCACTGATTTCCTCCTGTGTTTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGATCACATTCAGCAATAAAGGACTCC +
Preference number: 2 (lower is better)
Translates to: ETSALISSCVSASRF*ASSVLRSHSAIKDS
Trigger: GGAGTCCTTTATTGCTGAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGAAATCAGTGCGGAAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp GACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 2 (lower is better)
Translates to: DNFRRSREVDLDRLRRRSIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...GGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 2 (lower is better)
Translates to: ATEVVCQATVIVMETKVGVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...GCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp CCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACATTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 2 (lower is better)
Translates to: PQEAASDLFIPTQHDPGTLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...TGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp ACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 2 (lower is better)
Translates to: TEKGSLLVAATEGVRVVTRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...AGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR-3UTR TCA 90 bp GTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTTCTCCTGCTTTTCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: VPSPLSSSSDPDFSSPAFLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...AAAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACAGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTC +
Preference number: 2 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTGLLSG*PLSGEL
Trigger: GAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR-3UTR CCA 90 bp GCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 2 (lower is better)
Translates to: ASFSSDLREAIFPLELSSSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...GCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp CTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACTATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 2 (lower is better)
Translates to: LRRQHQIYLFLLNMTREHYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...GTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp CTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 2 (lower is better)
Translates to: LRTNFFHFHKNLLGFIHILPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...AATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 2 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACTGGATGCCCGCTCTCTaGAGAACCGAAGGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDWMPAL*RTEGVR
Trigger: TCTGACTCCTTCGGTTCTCCAGAGAGCGGGCATCCA...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442701.1
3UTR-3UTR CCA 90 bp TTCTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACAAGAAGGGCTCACTCCTaGTTGCAGCTACCGAAGGAG +
Preference number: 2 (lower is better)
Translates to: FFARTFSTSIRIFWDSSTRRAHS*LQLPKE
Trigger: CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCT...TGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR-3UTR CCA 90 bp AGTAAGGAAGTCGGGGGAATGATACATAAAAGTAAAGGTAAAGTGGTATGTGACAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 2 (lower is better)
Translates to: SKEVGGMIHKSKGKVVCDNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...GTCACATACCACTTTACCTTTACTTTTATGTATCATTCCCCCGACTTCCTTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR TCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACATATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 2 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp CCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACATACAACACAGAGCTGTaGAACGCTAGAGGAGGAATA +
Preference number: 2 (lower is better)
Translates to: PQEAASDLFIPTQHDPGTYNTEL*NARGGI
Trigger: TATTCCTCCTCTAGCGTTGCACAGCTCTGTGTTGTA...TGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR CCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 2 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR GCA 90 bp CCGCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 2 (lower is better)
Translates to: PQPQEAASDLFIPTQHDPVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 2 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR TCA 90 bp GCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTACCTCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 2 (lower is better)
Translates to: ARTFSTSIRIFWDSSTLPQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CCA 90 bp GAAGTCGGGGGAATGATACATAAAAGTAAAGGTAAAGTGGTATGTGACAAATTTACGACTGTCAAGCGCTaGCTACACAGAGGCTCTCCT +
Preference number: 2 (lower is better)
Translates to: EVGGMIHKSKGKVVCDKFTTVKR*LHRGSP
Trigger: AGGAGAGCCTCTGTGTAGCCAGCGCTTGACAGTCGT...AAATTTGTCACATACCACTTTACCTTTACTTTTATGTATCATTCCCCCGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR GCA 90 bp AGCTGTGCAACGCTAGAGGAGGAATATATTTTAGGATTTGCAAGCATCCAGGATCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 2 (lower is better)
Translates to: SCATLEEEYILGFASIQDLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...ATCCTGGATGCTTGCAAATCCTAAAATATATTCCTCCTCTAGCGTTGCACAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR TCA 90 bp TTCTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACAATAAAGGACTCCAAGTaGTCCATTGCTGGTCTTTGT +
Preference number: 2 (lower is better)
Translates to: FFARTFSTSIRIFWDSSTIKDSK*SIAGLC
Trigger: ACAAAGACCAGCAATGGATCACTTGGAGTCCTTTAT...TGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418978.5
3UTR-3UTR TCA 90 bp AGTAAGGAAGTCGGGGGAATGATACATAAAAGTAAAGGTAAAGTGGTATGTGACACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 2 (lower is better)
Translates to: SKEVGGMIHKSKGKVVCDTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GTCACATACCACTTTACCTTTACTTTTATGTATCATTCCCCCGACTTCCTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR GCA 72 bp CCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTATCTCGGGACCGGGACC +
Preference number: 3 (lower is better)
Translates to: PDDVPGCGSGNG*GGADVYLGTGT
Trigger: GGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CCA 72 bp CGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGGGACCGGGACCGGGAC +
Preference number: 3 (lower is better)
Translates to: RCPRLWLRERLR*RRCLSRDRDRD
Trigger: GTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR CCA 72 bp CGCAGGCAGGGGACAGTGCCTGTGCAGCCCATCACCTaGCGCCGTGCGAGCTCCTCCACAGCCCTCTCGCCT +
Preference number: 3 (lower is better)
Translates to: RRQGTVPVQPIT*RRASSSTALSP
Trigger: AGGCGAGAGGGCTGTGGAGGAGCTCGCACGGCGCCAGGTGATGGGCTGCACAGGCACTGTCCCCTGCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR-3UTR CAA 90 bp CGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: RSREARRCPRLWLRERLREAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...CCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR GCA 72 bp GGGGACAGTGCCTGTGCAGCCCATCACCTGGCGCCGTaGGAGCTCCTCCACAGCCCTCTCGCCTCTTCCCAC +
Preference number: 3 (lower is better)
Translates to: GDSACAAHHLAP*ELLHSPLASSH
Trigger: GTGGGAAGAGGCGAGAGGGCTGTGGAGGAGCTCGCACGGCGCCAGGTGATGGGCTGCACAGGCACTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR CCA 72 bp CTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACTCCTGGTTGCAGC +
Preference number: 3 (lower is better)
Translates to: LARSARSPRTPL*MPALWRTPGCS
Trigger: GCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR GCA 72 bp CTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTCCTGGTTGCAGCTACC +
Preference number: 3 (lower is better)
Translates to: LAPPALPGLLSG*PLSGELLVAAT
Trigger: GGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR GCA 72 bp GGTGTAGCTTCTTCCCAAGGAGCCTCGGAAGAGTTCTaGCACCCGGCTGCCAGCGACCTGGAGCCCACGCTG +
Preference number: 3 (lower is better)
Translates to: GVASSQGASEEF*HPAASDLEPTL
Trigger: CAGCGTGGGCTCCAGGTCGCTGGCAGCCGGGTGGCAGAACTCTTCCGAGGCTCCTTGGGAAGAAGCTACACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR CCA 72 bp CTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACCTGGGAAATGGGA +
Preference number: 3 (lower is better)
Translates to: LARSARSPRTPL*MPALWRTWEMG
Trigger: TCCCATTTCCCAGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR CCA 72 bp CTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACCGAAGGAGTCAGA +
Preference number: 3 (lower is better)
Translates to: LARSARSPRTPL*MPALWRTEGVR
Trigger: TCTGACTCCTTCGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442701.1
3UTR-3UTR CAA 90 bp TGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 3 (lower is better)
Translates to: CPRLWLRERLRWRRCLSRNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR GCA 72 bp CTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCTGGGAAATGGGAACCA +
Preference number: 3 (lower is better)
Translates to: LAPPALPGLLSG*PLSGEPGKWEP
Trigger: TGGTTCCCATTTCCCAGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR TCA 72 bp AGCAGGGCCTGGTCAGGACACAAGTCTCAGCCACTCTaGGCATGGACGCAACAGTGCACAGGCCCCAGGACG +
Preference number: 3 (lower is better)
Translates to: SRAWSGHKSQPL*AWTQQCTGPRT
Trigger: CGTCCTGGGGCCTGTGCACTGTTGCGTCCATGCTCAGAGTGGCTGAGACTTGTGTCCTGACCAGGCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR CCA 72 bp CCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCT +
Preference number: 3 (lower is better)
Translates to: PSLLTSVKPSSR*SSQASSPGALA
Trigger: AGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR CCA 72 bp CTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACTTGTATTTCGCAC +
Preference number: 3 (lower is better)
Translates to: LARSARSPRTPL*MPALWRTCISH
Trigger: GTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CAA 90 bp GACGATGGACCCGCAGACCAGGCCAGGCAAGGCCCTACATCCCCTATACCTGGAAGGGCTCACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: DDGPADQARQGPTSPIPGRAHSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCT...TCCAGGTATAGGGGATGTAGGGCCTTGCCTGGCCTGGTCTGCGGGTCCATCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
3UTR GCA 72 bp CTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTTGTATTTCGCACTTCG +
Preference number: 3 (lower is better)
Translates to: LAPPALPGLLSG*PLSGELVFRTS
Trigger: CGAAGTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CAA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: SPASFSSDLREAIFPLELEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...GAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
3UTR-3UTR CAA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 3 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CAA 90 bp CGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAACTGGAGAACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: RPPSLLTSVKPSSRWSSQLENSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCAG...TTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
3UTR TCA 72 bp CCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCATCTGTAAACTTGACC +
Preference number: 3 (lower is better)
Translates to: PARMSWGQQSRR*LLQTRSSVNLT
Trigger: GGTCAAGTTTACAGATGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR GCA 72 bp TGCAGAAACTTCCGCACTGATTTCCTCCTGTGTTTCTaGCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATC +
Preference number: 3 (lower is better)
Translates to: CRNFRTDFLLCF*QPLLGELSSPI
Trigger: GATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR-3UTR CAA 90 bp CTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGAGCAGGTATATAGTTTaGCAAAGATGCAACCGCTTT +
Preference number: 3 (lower is better)
Translates to: LENLYFALRSREARRCPRSRYIV*QRCNRF
Trigger: AAAGCGGTTGCATCTTTGCAAAACTATATACCTGCT...CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR-3UTR CAA 90 bp CCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 3 (lower is better)
Translates to: PPVFLPAASWRAQFSDHIAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...AATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR GCA 72 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAGAGTAGTTACTTGTAT +
Preference number: 3 (lower is better)
Translates to: RPWEHREGLTPG*SYRRSQSSYLY
Trigger: ATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR TCA 72 bp GCTGAACAGACCTCGCAGACACGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATGGAATTTCTGTATTCT +
Preference number: 3 (lower is better)
Translates to: AEQTSQTRSFCC*KLDAGMEFLYS
Trigger: AGAATACAGAAATTCCATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR TCA 72 bp TTTTCCTCAACTGATCAAGCTTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGCCACCGAAGTGGTCTG +
Preference number: 3 (lower is better)
Translates to: FSSTDQASLGSE*TPSVTCHRSGL
Trigger: CAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCTTGATCAGTTGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR TCA 72 bp GGAGGCAGCATCAGATTTATTTATTCCTACTCAACATaGCCCGGGAACACAGGAGCAACTCTGTACACTTCT +
Preference number: 3 (lower is better)
Translates to: GGSIRFIYSYST*PGNTGATLYTS
Trigger: AGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
3UTR CCA 72 bp TTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTaGGATTCATCCACATTACCTTCAGCCCCTAGCTGT +
Preference number: 3 (lower is better)
Translates to: FARTFSTSIRIF*DSSTLPSAPSC
Trigger: ACAGCTAGGGGCTGAAGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
3UTR TCA 72 bp GCAAATAATCTGCACAGCCCTGAGAATGTGCCAGTGTaGACTTACAACTTCATTACTCAGCAGAAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: ANNLHSPENVPV*TYNFITQQKRK
Trigger: TTTTCTTTTCTGCTGAGTAATGAAGTTGTAAGTTCACACTGGCACATTCTCAGGGCTGTGCAGATTATTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
3UTR GCA 72 bp ATTTTAAAGCTAGTCTGTGTATACAACACAGAGCTGTaGAACGCTAGAGGAGGAATATATTTTAGGATTTGC +
Preference number: 3 (lower is better)
Translates to: ILKLVCVYNTEL*NARGGIYFRIC
Trigger: GCAAATCCTAAAATATATTCCTCCTCTAGCGTTGCACAGCTCTGTGTTGTATACACAGACTAGCTTTAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp CGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RSREARRCPRLWLRERLRARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...CCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCCCGAGCCGTGCCCATaGGCTGGTCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LELSSLQSGGPRSLRPLSPEPCP*AGPAGP
Trigger: GGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGG...GGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCGCCTCGGAAGAGTTCTaGCACCCGGCTGCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GPSLAPPALPGLLSGCPLASEEF*HPAASD
Trigger: GTCGCTGGCAGCCGGGTGGCAGAACTCTTCCGAGGC...GAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp TGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: WSSQASSPGALARSARSPGVDKR*SRRPRA
Trigger: GGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCC...GGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCTCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: WSSQASSPGALARSARSPSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...GGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: LRERLRWRRCLSRDRDRDRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...GTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGGGACAGTGCCTGTGCAGCCCATCACCTGGCGCCGTGCGAGCTCCTCCACAGCAGCAGGGCCCGCATCTaGGCCTGGGCGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: GDSACAAHHLAPCELLHSSRARI*AWADMV
Trigger: TACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCT...GCTGTGGAGGAGCTCGCACGGCGCCAGGTGATGGGCTGCACAGGCACTGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp TGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: WSSQASSPGALARSARSPATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...GGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCG +
Preference number: 4 (lower is better)
Translates to: SRWSSQASSPGALARSARGLLSG*PLSGEP
Trigger: CGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...GCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442701.1
CDS-3UTR CCA 90 bp GGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GPSLAPPALPGLLSGCPLPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...GAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRWSSQASSPGALARSARPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...GCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: VGALKPPVRGPSLAPPALATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...GAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: ISHFGPGKPDDVPGCGSGGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...CCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FPLELSSLQSGGPRSLRPPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...CGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR TCA 90 bp GGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTACCTGGAGCCCACGCTaGTTCCAGCCCTCCGCCGAC +
Preference number: 4 (lower is better)
Translates to: GTAAVAPMSISGPGPGQFTWSPR*FQPSAD
Trigger: GTCGGCGGAGGGCTGGAATCAGCGTGGGCTCCAGGT...AAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR GCA 90 bp CCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: PVGALKPPVRGPSLAPPAGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...AGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: VPGSPTMSPAVAPGTAAVGLLSG*PLSGEL
Trigger: AAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: FPLELSSLQSGGPRSLRPGLTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC...CGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp GCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGTTCTGCCACCCGGCTaGCAGCGACCTGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: APGRRVQISPASFSSDLRVLPPG*QRPGAH
Trigger: GTGGGCTCCAGGTCGCTGGCAGCCGGGTGGCAGAAC...ACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR GCA 90 bp TCCGCCGACTCCACAGTTCGCGGAGGGGCACGGAGCCGCGGCGCCCGCCGGGGAGTTTACGGTTCCCCTTaGAATGGTACAGAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SADSTVRGGARSRGARRGVYGSP*NGTEPE
Trigger: CTCTGGTTCTGTACCATTGCAAGGGGAACCGTAAAC...TCCCCGGCGGGCGCCGCGGCTCCGTGCCCCTCCGCGAACTGTGGAGTCGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp TTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: FPLELSSLQSGGPRSLRPNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...CGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCAGAAGGGCTCACTCCTaGTTGCAGCTACCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GPSLAPPALPGLLSGCPLRRAHS*LQLPKE
Trigger: CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCT...GAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR TCA 90 bp TTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: LELSSLQSGGPRSLRPLSQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...GGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: CPRLWLRERLRWRRCLSRLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ISHFGPGKPDDVPGCGSGPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...CCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCTCGCCTCTTCCCACACCTGAGTCCCGTTCACGACTCCCCAGCCCTACTCCTGTGCAGCCCATCACCTaGCGCCGTGCGAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSPLPTPESRSRLPSPTPVQPIT*RRASSS
Trigger: GGAGGAGCTCGCACGGCGCCAGGTGATGGGCTGCAC...AGGAGTAGGGCTGGGGAGTCGTGAACGGGACTCAGGTGTGGGAAGAGGCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR TCA 90 bp CGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAACCCGAGCCGTGCCCATaGGCTGGTCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RPPSLLTSVKPSSRWSSQPEPCP*AGPAGP
Trigger: GGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGG...TTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAACAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: PGTAAVAPMSISGPGPGQQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...TTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCAGCAGGGCCCGCATCTaGGCCTGGGCGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: GRRVQISPASFSSDLREASRARI*AWADMV
Trigger: TACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCT...GGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: IFPLELSSLQSGGPRSLRLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...GCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: ISHFGPGKPDDVPGCGSGLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...CCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: HLPVGALKPPVRGPSLAPGLLSG*PLSGEP
Trigger: AGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp CCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: PASFSSDLREAIFPLELSARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...TGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGACTCCTCTCTGGATGCCCGCTCTCTGGAGAACTCCTGGTTGCAGCTACCGAAGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLLSGCPLSGELLVAATEARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...TTCGGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR CCA 90 bp CTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: LENLYFALRSREARRCPRAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPGSPTMSPAVAPGTAAVRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...CACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCTCTGGAAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: SLAPPALPGLLSGCPLSGNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...TCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCGAGAGGAGCCCGACCTaGACCCACGGCCGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SPASFSSDLREAIFPLELERSPT*THGRLR
Trigger: TCTGAGGCGGCCGTGGGTCCAGGTCGGGCTCCTCTC...GAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp AGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCTGAACAGACCCGAGCCGTGCCCATaGGCTGGTCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGLPGDGHCHGDQGRLNRPEPCP*AGPAGP
Trigger: GGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGG...TCTGTTCAGCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: VPGSPTMSPAVAPGTAAVSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...CACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WSSQASSPGALARSARSPLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: REAIFPLELSSLQSGGPRAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...GCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCTATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VGALKPPVRGPSLAPPALYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...GAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: VGALKPPVRGPSLAPPALCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...GAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: RLWLRERLRWRRCLSRDRCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...CCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: VGALKPPVRGPSLAPPALSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...GAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: GDGFRSRRPPSLLTSVKPSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...TGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR TCA 90 bp AGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGTGGCCGCTCAGGCACTaGCGATGGACCCGCAGACCA +
Preference number: 4 (lower is better)
Translates to: RSRRPPSLLTSVKPSSRWWPLRH*RWTRRP
Trigger: TGGTCTGCGGGTCCATCGTCAGTGCCTGAGCGGCCA...CCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTCAGTGGAGGCTGCTaGCCCCCTTCTGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: DYLQHPGDGFRSRRPPSLLSGGC*PPSAGR
Trigger: GCGGCCAGCAGAAGGGGGGCAGCAGCCTCCACTGAG...AAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp CGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: RPPSLLTSVKPSSRWSSQAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...TTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: SDAPPVPSPLSSSSDPDFAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...GAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: PKCNLPPKWSARRRSLSWAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...CCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: PSLLTSVKPSSRWSSQASAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...GGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCTCGCCTCTTCCCACACCTGAGTCCCGTTCACGACTCCCCAGCCCTACTCCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSPLPTPESRSRLPSPTPPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...AGGAGTAGGGCTGGGGAGTCGTGAACGGGACTCAGGTGTGGGAAGAGGCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp TCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCTCTGGAAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLAPPALPGLLSGCPLSGKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...TCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTTGGATGCCCGCTCTCTaGAGAACTCCTGGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LREAIFPLELSSLQSGGPWMPAL*RTPGCS
Trigger: GCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCA...AGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR TCA 90 bp TGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CGSGNGCGGADVYLGTGTLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGDGFRSRRPPSLLTSVKAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...CTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCTGCTCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAQTLLPFPLLSPPQAILAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...CAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGATCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp TCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: SDYLQHPGDGFRSRRPPSGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...AGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR GCA 90 bp TATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: YLQHPGDGFRSRRPPSLLGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...CAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR GCA 90 bp CACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: HPGDGFRSRRPPSLLTSVGLLSG*PLSGEL
Trigger: AAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCGCAGGCAGGGGACAGTaGCTGTGCAGCCCATCACCT +
Preference number: 4 (lower is better)
Translates to: RVQISPASFSSDLREAIFAGRGQ*LCSPSP
Trigger: AGGTGATGGGCTGCACAGGCACTGTCCCCTGCCTGC...GAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp GACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: DAPPVPSPLSSSSDPDFSLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...AGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: LTSVKPSSRWSSQASSPGLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...CCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: YLQHPGDGFRSRRPPSLLRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...CAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGTGGATGCCCGCTCTCTaGAGAACTTGTATTTCGCAC +
Preference number: 4 (lower is better)
Translates to: ISHFGPGKPDDVPGCGSGWMPAL*RTCISH
Trigger: GTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCA...CCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCTCTGGAGAACTCCTaGTTGCAGCTACCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: REAIFPLELSSLQSGGPRSLENS*LQLPKE
Trigger: CTCCTTCGGTAGCTGCAACCAGGAGTTCTCCAGAGA...GCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR TCA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGATCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQASGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR TCA 90 bp GACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTTCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: DAPPVPSPLSSSSDPDFSSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...AGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CTCTCGCCTCTTCCCACACCTGAGTCCCGTTCACGACTCCCCAGCCCTACTCCTAAGTCTCAGCCACTCTaGGCATGGACGCAACAGTGC +
Preference number: 4 (lower is better)
Translates to: LSPLPTPESRSRLPSPTPKSQPL*AWTQQC
Trigger: GCACTGTTGCGTCCATGCTCAGAGTGGCTGAGACTT...AGGAGTAGGGCTGGGGAGTCGTGAACGGGACTCAGGTGTGGGAAGAGGCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp AACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCAAGCAGGGCCCGCATCTaGGCCTGGGCGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: NPKCNLPPKWSARRRSLSSRARI*AWADMV
Trigger: TACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCT...TGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: WSSQASSPGALARSARSPYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...GGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: VPGSPTMSPAVAPGTAAVYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...CACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGACTCCTCTCTGGATGCCCGCTCTCTGGAGAACTCCTGGTTGCAGCTACCGAAGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: GLLSGCPLSGELLVAATEATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...TTCGGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR GCA 90 bp TCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: SFSSDLREAIFPLELSSLGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...GAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR GCA 90 bp CTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTGAGGCCAACCAGACTTaGCCACCACATATGGAGTGT +
Preference number: 4 (lower is better)
Translates to: LREAIFPLELSSLQSGGPEANQT*PPHMEC
Trigger: ACACTCCATATGTGGTGGGCAAGTCTGGTTGGCCTC...AGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp GTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGAAAGTGCAAATAATCTaGACAGCCCTGAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: VAPGTAAVAPMSISGPGPKVQII*TALRMC
Trigger: GCACATTCTCAGGGCTGTGCAGATTATTTGCACTTT...CGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQGVDKR*SRRPRA
Trigger: GGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCC...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: LLCFCQPLLGELSSPITFLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...GAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCACTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: CNLPPKWSARRRSLSWRPLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...TGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VPGSPTMSPAVAPGTAAVNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...CACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: FSSDLREAIFPLELSSLQRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGGCCCTCAGCAGACCCTaGGAACACAGAGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VQISPASFSSDLREAIFPALSRP*EHREGL
Trigger: GAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAGGGC...CGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR TCA 90 bp CTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: LENLYFALRSREARRCPRQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CGGGACCGGGACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: RDRDNFRRSREVDLDRLRRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...TCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTCCCGGTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: REAIFPLELSSLQSGGPRSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...GCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLNPCASQPGCHGGSSPEAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...TTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTATCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: GNTEKGSLLVAATEGVRVSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...TACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTGCCTCTTCCCACACCTaGGTCCCGTTCACGACTCCC +
Preference number: 4 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSASSHT*VPFTTP
Trigger: GGGAGTCGTGAACGGGACTCAGGTGTGGGAAGAGGC...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR GCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp CCTGCTCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: PAQTLLPFPLLSPPQAILTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...CAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: QTLGTQRRAHSWLQLPKELIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp AGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RSRRPPSLLTSVKPSSRWLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...CCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVGLTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp TCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCGCATGGACGCAACAGTaGACAGGCCCCAGGACGCAG +
Preference number: 4 (lower is better)
Translates to: SFSSDLREAIFPLELSSLAWTQQ*TGPRTQ
Trigger: CTGCGTCCTGGGGCCTGTGCACTGTTGCGTCCATGC...GAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp GTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTTCTCCTGCTTTTGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: VPSPLSSSSDPDFSSPAFARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...AAAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATGATCTTGAGCTCCTCCCTACACAGTACAACCTACCTAACGACTGTCAAGCGCGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: MILSSSLHSTTYLTTVKRARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...GCGCTTGACAGTCGTTAGGTAGGTTGTACTGTGTAGGGAGGAGCTCAAGATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGACCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: FRSRRPPSLLTSVKPSSRPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...ACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: SRWSSQASSPGALARSARSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...GCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQAPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR TCA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGCCCGAGCCGTGCCCATaGGCTGGTCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQPEPCP*AGPAGP
Trigger: GGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGG...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: PWEHREGLTPGCSYRRSQQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp AGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RLFTAPGRRVQISPASFSAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...AGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: LLCFCQPLLGELSSPITFATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...GAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp AGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: SRPWEHREGLTPGCSYRRGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...CCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAACCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGAGACCAAGGTAGGCTGAACAGACCTCGCAGACACGCAGCTTTTGCTGCTGAACCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GDQGRLNRPRRHAAFAAEPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...TTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPVFLPAASWRAQFSDHIPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...AATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: SADPGNTEKGSLLVAATELPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp CTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: LFTAPGRRVQISPASFSSNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...AGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: TLGTQRRAHSWLQLPKESNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGAGAAGGGCTCACTCCTaGTTGCAGCTACCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QQTLGTQRRAHSWLQLPKRRAHS*LQLPKE
Trigger: CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCT...CTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp CCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAGAGGTAAGCAGGGCCTaGTCAGGACACAAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PASFSSDLREAIFPLELSEVSRA*SGHKSQ
Trigger: CTGAGACTTGTGTCCTGACCAGGCCCTGCTTACCTC...TGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp AGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGGCTCTCTGGAGAACCTaGGAAATGGGAACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SRPWEHREGLTPGCSYRRALWRT*EMGTRG
Trigger: GCCTCTGGTTCCCATTTCCCAGGTTCTCCAGAGAGC...CCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR TCA 90 bp TCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAACAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: SADPGNTEKGSLLVAATEQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...TTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: PGDGFRSRRPPSLLTSVKQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...CTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: PGDGFRSRRPPSLLTSVKSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...CTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CTCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSRPWEHREGLTPGCSYRTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...TCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp GCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: ADPGNTEKGSLLVAATEGTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...TCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp ACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: TPSVTCHRSGLPGDGHCHLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...ATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CCGCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGCATCACCTGGCGCCGTaGGAGCTCCTCCACAGCCCT +
Preference number: 4 (lower is better)
Translates to: PQPQEAASDLFIPTQHDPHHLAP*ELLHSP
Trigger: AGGGCTGTGGAGGAGCTCGCACGGCGCCAGGTGATG...CGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCGCCCGCATCTGCGCCTaGGCGGACATGGTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSARICA*ADMVAG
Trigger: GCCGGCTACCATGTCCGCCCAGGCGCAGATGCGGGC...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGACTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PSVTCHRSGLPGDGHCHGLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...TCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCTGAACAGAAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: SGLPGDGHCHGDQGRLNRNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...TCTGTTCAGCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: TLGTQRRAHSWLQLPKESTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACTGGATGCCCGCTCTCTaGAGAACTTGTATTTCGCAC +
Preference number: 4 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDWMPAL*RTCISH
Trigger: GTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCA...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VQISPASFSSDLREAIFPKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...CGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp TATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGTGGATGCCCGCTCTCTaGAGAACCGAAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: YLQHPGDGFRSRRPPSLLWMPAL*RTEGVR
Trigger: TCTGACTCCTTCGGTTCTCCAGAGAGCGGGCATCCA...CAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442701.1
CDS-3UTR TCA 90 bp TCCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATCAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: SSCVSASRFLASSVLRSHQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...ATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCTCTGGAATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: SLAPPALPGLLSGCPLSGIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...TCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCTCAGACGTAAACAGCTaGGCACCAAAAGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVSDVNS*APKGHW
Trigger: CCAATGGCCTTTTGGTGCTCAGCTGTTTACGTCTGA...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR TCA 90 bp CCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCTTTTATGCCCGCTGTTaGAAAGTGTTAAAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: PSSRWSSQASSPGALARSFYARC*KVLKEK
Trigger: CTTTTCCTTTAACACTTTTCAACAGCGGGCATAAAA...GGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR GCA 90 bp CTTCTTGGCGAGCTCAGTTCTCCGATCACATTCAGCAATAAAGGACTCCAAGTGAGCAGGGCCCGCATCTaGGCCTGGGCGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: LLGELSSPITFSNKGLQVSRARI*AWADMV
Trigger: TACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCT...CACTTGGAGTCCTTTATTGCTGAATGTGATCGGAGAACTGAGCTCGCCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ISHFGPGKPDDVPGCGSGVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: APGRRVQISPASFSSDLRLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...ACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RLFTAPGRRVQISPASFSTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...AGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: SDAPPVPSPLSSSSDPDFTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...GAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: GNTEKGSLLVAATEGVRVGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...TACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp CCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: PSVTCHRSGLPGDGHCHGGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...TCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: LCERLSDYLQHPGDGFRSGVDKR*SRRPRA
Trigger: GGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCC...AGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLEAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGACGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSRPWEHREGLTPGCSYRRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...TCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp CCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCACGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PASFSSDLREAIFPLELSRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...TGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: HLPVGALKPPVRGPSLAPSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...CGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AGGAGTCAGAGTAGTTACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGAAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: RSQSSYLYFALRSREARRNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...TCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAACTACTCTGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CCA 90 bp TCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: SFSSDLREAIFPLELSSLTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...GAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: LLCFCQPLLGELSSPITFTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...GAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: PPVFLPAASWRAQFSDHITSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...AATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAAGAAGGGCTCACTCCTaGTTGCAGCTACCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQRRAHS*LQLPKE
Trigger: CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCT...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
3UTR CAA 72 bp CCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGA +
Preference number: 4 (lower is better)
Translates to: PGCSYRRSQSSY*YFALRSREARR
Trigger: TCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR TCA 90 bp GCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTACCTCCCGAGCCGTGCCCATaGGCTGGTCCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: ARTFSTSIRIFWDSSTLPPEPCP*AGPAGP
Trigger: GGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGG...AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAACAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLNPCASQPGCHGGSSPEQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...TTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp TGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCACGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: CNLPPKWSARRRSLSWRPRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...TGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGACTCCTCTCTGGATGCCCGCTCTCTGGAGAACTCCTGGTTGCAGCTACCGAAAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GLLSGCPLSGELLVAATESFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...TTCGGTAGCTGCAACCAGGAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR TCA 90 bp ACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TEKGSLLVAATEGVRVVTAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...AGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR GCA 90 bp CCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: PSLLTSVKPSSRWSSQASCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...GGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAATGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: SADPGNTEKGSLLVAATECNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...TTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp CTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: LREAIFPLELSSLQSGGPYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...AGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCAACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: NPKCNLPPKWSARRRSLSTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...TGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: PQEAASDLFIPTQHDPGTLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...TGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATC +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFAVPMS*SSRARI
Trigger: GATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGC...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQARRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTCGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: DAPPVPSPLSSSSDPDFSRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...AGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACCCCCAGACCCTCGCCTaGTTGGCCGCTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LRRQHQIYLFLLNMTREHPQTLA*LAALTH
Trigger: GTGAGTCAGAGCGGCCAACCAGGCGAGGGTCTGGGG...GTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp CTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LGTQRRAHSWLQLPKESEQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...CTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp ACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCACAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLGTQRRAHSWLQLPKESQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp GACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DAPPVPSPLSSSSDPDFSQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...AGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQASLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: SRPWEHREGLTPGCSYRRTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...CCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp TACATAGGAAGGAGGCTGAAGCCCCATCCATGGCGCAGACTCCGAGAGAGGAGCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: YIGRRLKPHPWRRLRERSTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GCTCCTCTCTCGGAGTCTGCGCCATGGATGGGGCTTCAGCCTCCTTCCTATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp ACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCACTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: TLGTQRRAHSWLQLPKESLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGTCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACCTGGTTGGCCGCTCTaGCTCACCGTCCCGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVPGWPL*LTVPSR
Trigger: ACGGCTCGGGACGGTGAGTCAGAGCGGCCAACCAGG...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp GGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCGAGAATGTGCCAGTGTaGACTTACAACTTCATTACT +
Preference number: 4 (lower is better)
Translates to: GRRVQISPASFSSDLREAENVPV*TYNFIT
Trigger: AGTAATGAAGTTGTAAGTTCACACTGGCACATTCTC...GGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR GCA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGAGCAGGGCCCGCATCTaGGCCTGGGCGGACATGGTA +
Preference number: 4 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGSRARI*AWADMV
Trigger: TACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCT...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: PPVFLPAASWRAQFSDHICNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...AATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: DCVNVYQTIYSTRETGSDATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...ATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGTGGAGAACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: ERLSDYLQHPGDGFRSRRWRTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCA...CCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR GCA 90 bp CTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAATACAACACAGAGCTGTaGAACGCTAGAGGAGGAATA +
Preference number: 4 (lower is better)
Translates to: LLNPCASQPGCHGGSSPEYNTEL*NARGGI
Trigger: TATTCCTCCTCTAGCGTTGCACAGCTCTGTGTTGTA...TTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR GCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCGTTTCGTCTCCCATCTaGATTCTTCAAGACCTCAGC +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQAVSSPI*ILQDLS
Trigger: GCTGAGGTCTTGAAGAATGCAGATGGGAGACGAAAC...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFGVDKR*SRRPRA
Trigger: GGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCC...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACG +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFLSGRR*QRRRQT
Trigger: CGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAG...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGAGACCAAGGTAGGCTGAACAGACCTCGCAGACACGCAGCTTTTGCTGCTGAACGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: GDQGRLNRPRRHAAFAAERRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...TTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CCCCGCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: PRSLRRQHQIYLFLLNMTLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...GGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: ASDLFIPTQHDPGTQEQLRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...GAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGGCACCAAAAGGCCATTaGCTCCACATATACATGTGG +
Preference number: 4 (lower is better)
Translates to: LGTQRRAHSWLQLPKESEAPKGH*LHIYMW
Trigger: CCACATGTATATGTGGAGCCAATGGCCTTTTGGTGC...CTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR CCA 90 bp GTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTTCTCCTGCTTTTCGGTTCCCCTTGCAATaGTACAGAACCAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VPSPLSSSSDPDFSSPAFRFPLQ*YRTRAG
Trigger: GCCCGCTCTGGTTCTGTACCATTGCAAGGGGAACCG...AAAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GNTEKGSLLVAATEGVRVSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...TACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp GCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: ASFSSDLREAIFPLELSSTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTCGGGAGGTAGATCTTaGCCGCCTCCGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: ASDLFIPTQHDPGTQEQLSGGRS*PPPTPI
Trigger: GATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGA...GAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRRVQISPASFSSDLREAVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...GGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: DNFRRSREVDLDRLRRRSYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...GGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGACAGCCCTGAGAATGTaGCAGTGTGAACTTACAACT +
Preference number: 4 (lower is better)
Translates to: PKCNLPPKWSARRRSLSWTALRM*QCELTT
Trigger: AGTTGTAAGTTCACACTGGCACATTCTCAGGGCTGT...CCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp GTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VILDCVNVYQTIYSTRETGVDKR*SRRPRA
Trigger: GGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCC...CGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAACCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLEPRTPL*MPALWR
Trigger: TCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGG...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NVYQTIYSTRETGSDLAGQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...GCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: PQPQEAASDLFIPTQHDPRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...CGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGCGATCTCTGGTTCTTaGTCCCGACCTCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQAISGS*SRPPAQ
Trigger: CTGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGC...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAGGTGACGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: NPCASQPGCHGGSSPEGDVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...GTCACCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: SRPWEHREGLTPGCSYRRYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...CCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp CCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: PSLLTSVKPSSRWSSQASLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...GGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTCTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: FRSRRPPSLLTSVKPSSRLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...ACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TTTCTTTACTTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGGCCACCGAAGTGGTCTaGCAGGCGACGGTCATTGTC +
Preference number: 4 (lower is better)
Translates to: FLYLQSHNLLGGPSRGFWATEVV*QATVIV
Trigger: GACAATGACCGTCGCCTGGCAGACCACTTCGGTGGC...CCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAAGTAAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGGCTCCGGGAACGGCTaGGGTGGCGCCGATGTCTAT +
Preference number: 4 (lower is better)
Translates to: KGNFRLCERLSDYLQHPGGSGNG*GGADVY
Trigger: ATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCC...TCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR GCA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILGLTPG*SYRRSQ
Trigger: CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCC...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCCCAGCCAGGATGTCATaGGGGCAGCAGTCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFPARMS*GQQSRR
Trigger: CCTTCTGGACTGCTGCCCCCATGACATCCTGGCTGG...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTCGGGAACGGCTGCGGTaGCGCCGATGTCTATCTCGG +
Preference number: 4 (lower is better)
Translates to: LRTNFFHFHKNLLGFIHIRERLR*RRCLSR
Trigger: CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCG...AATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAACAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLEQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp ACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAACACTTAATGAGATCTaGCTCCATCACTGTACCAAA +
Preference number: 4 (lower is better)
Translates to: TLGTQRRAHSWLQLPKESTLNEI*LHHCTK
Trigger: TTTGGTACAGTGATGGAGTCAGATCTCATTAAGTGT...TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR GCA 90 bp CAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: QTLGTQRRAHSWLQLPKEVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR GCA 90 bp TGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCACTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: CNLPPKWSARRRSLSWRPLMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...TGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGGLLSG*PLSGEL
Trigger: GAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR GCA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCAGCTGCAGAATTTTATaGCCGCTGTTGAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQASCRIL*PLLKSV
Trigger: AACACTTTTCAACAGCGGGCATAAAATTCTGCAGCT...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CCA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: QQTLGTQRRAHSWLQLPKSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...CTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CCA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR TCA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CCGCAGCCTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: PQPQEAASDLFIPTQHDPSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...CGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAGGCTGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTGATTTCTCTTCTCCTGCTTTTAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: VPSPLSSSSDPDFSSPAFSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...AAAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCCCCATCAAATGCAATaGAAAGCTGATCTAAAGATA +
Preference number: 4 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSPHQMQ*KADLKI
Trigger: TATCTTTAGATCAGCTTTTCATTGCATTTGATGGGG...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR GCA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAATACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTATTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGGLLSG*PLSGEL
Trigger: AAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp TATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTGGAATACAACACTATATaGACAGAACATGACACTACG +
Preference number: 4 (lower is better)
Translates to: YLQHPGDGFRSRRPPSLLEYNTI*TEHDTT
Trigger: CGTAGTGTCATGTTCTGTGCATATAGTGTTGTATTC...CAGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACCTGCCAGCCGCTTCTTaGCGAGCTCAGTTCTCCGAT +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDLPAAS*RAQFSD
Trigger: ATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAG...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FIRLFTAPGRRVQISPASNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...GGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDNLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGACCTCCTGCGATCTCTaGTTCTTGATCCCGACCTCC +
Preference number: 4 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGTSCDL*FLIPTS
Trigger: GGAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGT...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAAGGTAGGCTGAACAGAATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: SGLPGDGHCHGDQGRLNRIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...TCTGTTCAGCCTACCTTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTTGTATTTCGCACTTCTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: LLVAATEGVRVVTCISHFSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...GAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR TCA 90 bp GGCGAGCTCAGTTCTCCGATCACATTCAGCAATAAAGGACTCCAAGTGATCCATCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GELSSPITFSNKGLQVIHLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...ATGGATCACTTGGAGTCCTTTATTGCTGAATGTGATCGGAGAACTGAGCTCGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCTATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAATGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLECNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: FSSDLREAIFPLELSSLQSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GGAGACCAAGGTAGGCTGAACAGACCTCGCAGACACGCAGCTTTTGCTGCTGAATCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: GDQGRLNRPRRHAAFAAESIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...TTCAGCAGCAAAAGCTGCGTGTCTGCGAGGTCTGTTCAGCCTACCTTGGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTTCCTCCTGTGTTTCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: FPPVFLPAASWRAQFSDHSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...GTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGAAACACAGGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NVYQTIYSTRETGSDLAGNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...GCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTAACTTGCCACCGAAGTaGTCTGCCAGGCGACGGTCA +
Preference number: 4 (lower is better)
Translates to: LRTNFFHFHKNLLGFIHINLPPK*SARRRS
Trigger: TGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTT...AATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCTGGATGCCCGCTCTCTaGAGAACTTGTATTTCGCAC +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSWMPAL*RTCISH
Trigger: GTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCA...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACAACGACTGTCAAGCGCTaGCTACACAGAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTTTVKR*LHRGSP
Trigger: AGGAGAGCCTCTGTGTAGCCAGCGCTTGACAGTCGT...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp TTCTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACACAGCAGTCCAGAAGGTaGCTCTTGCAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: FFARTFSTSIRIFWDSSTQQSRR*LLQTRS
Trigger: TGACCGTGTCTGCAAGAGTCACCTTCTGGACTGCTG...TGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCTCTCTCGGATCTGAATaGACCCCAAGTGTAACTTGC +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSSLGSE*TPSVTC
Trigger: GCAAGTTACACTTGGGGTTCATTCAGATCCGAGAGA...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp AGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RQHQIYLFLLNMTREHRSLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: ERLSDYLQHPGDGFRSRRVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...CCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: TEKGSLLVAATEGVRVVTYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...AGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR GCA 90 bp AAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: KGNFRLCERLSDYLQHPGGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...TCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTGGATGCCCGCTCTCTaGAGAACTTGTATTTCGCAC +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFWMPAL*RTCISH
Trigger: GTGCGAAATACAAGTTCTCCAGAGAGCGGGCATCCA...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACAAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTACCTCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: ARTFSTSIRIFWDSSTLPRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCAGCTTCTCTCGGATCTaGATGAACCCCAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFSFSRI*MNPKCN
Trigger: GTTACACTTGGGGTTCATTCAGATCCGAGAGAAGCT...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: FRLCERLSDYLQHPGDGFTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGTATTCCTACTCAACATaGCCCGGGAACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VILDCVNVYQTIYSTRETYSYST*PGNTGA
Trigger: TGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATA...CGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp AAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAACCCCAAGTGTAACTTaGCACCGAAGTGGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGNFRLCERLSDYLQHPGTPSVT*HRSGLP
Trigger: TGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGT...TCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGTTGATCCCGACCTCCTaGTCAGACGCTCCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPLIPTS*SDAPPV
Trigger: AACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAA...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACGGAGGGCCAAGTCGTaGATTTTGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVRRAKS*ILVHSP
Trigger: AGGAGAATGTACCAAAATCCACGACTTGGCCCTCCG...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTCTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACAAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FFARTFSTSIRIFWDSSTKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...TGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp ATGATCTTGAGCTCCTCCCTACACAGTACAACCTACCTAACGACTGTCAAGCGCATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: MILSSSLHSTTYLTTVKRIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...GCGCTTGACAGTCGTTAGGTAGGTTGTACTGTGTAGGGAGGAGCTCAAGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDLLKRS*FLFSCF
Trigger: AAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAG...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp CTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: LRTNFFHFHKNLLGFIHICNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...AATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTACCTTGCAATCTCATAATCTaGTCGGAGGGCCAAGTCGTG +
Preference number: 4 (lower is better)
Translates to: ARTFSTSIRIFWDSSTLPCNLII*SEGQVV
Trigger: CACGACTTGGCCCTCCGAGCAGATTATGAGATTGCA...AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAACTCATGTACTTTTTCTaGCTTTGCAGAAACTTCCGC +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLELMYFF*LCRNFR
Trigger: GCGGAAGTTTCTGCAAAGGCAGAAAAAGTACATGAG...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGGAGCGTGACCTCCTaGGATCTCTGGTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPGSVTS*DLWFLI
Trigger: GATCAAGAACCAGAGATCGCAGGAGGTCACGCTCCC...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGACTCCTCTCTGGATaGCCGCTCTCTGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPGLLSG*PLSGEL
Trigger: AAGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCC...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACCTTCAAGACCTCAGCTaGAGAATTTTATGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDLQDLS*RILCPL
Trigger: CAGCGGGCATAAAATTCTGCAGCTGAGGTCTTGAAG...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGCGCAGCTTTTGCTGCTaGAAACTGGATGCAGGCATG +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPRSFCC*KLDAGM
Trigger: CATGCCTGCATCCAGTTTTCAGCAGCAAAAGCTGCG...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp TTTCTTTACTTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGATAAAGGACTCCAAGTaGTCCATTGCTGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FLYLQSHNLLGGPSRGFWIKDSK*SIAGLC
Trigger: ACAAAGACCAGCAATGGATCACTTGGAGTCCTTTAT...CCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAAGTAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418978.5
CDS-3UTR GCA 90 bp GACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DCVNVYQTIYSTRETGSDVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...ATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GGCGAGCTCAGTTCTCCGATCACATTCAGCAATAAAGGACTCCAAGTGATCCATGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GELSSPITFSNKGLQVIHVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...ATGGATCACTTGGAGTCCTTTATTGCTGAATGTGATCGGAGAACTGAGCTCGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAAAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLENWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGAAGCCATCTTCCCGTTaGAGCTCTCAAGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPKPSSR*SSQASS
Trigger: ACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTT...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR TCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAAATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLEIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAATCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLESIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CCA 90 bp TTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCTCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: FRLCERLSDYLQHPGDGFSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...GAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCAACTGGATGCAGGCATaGAATTTCTGTATTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASDLFIPTQHDPGTQEQLNWMQA*NFCILP
Trigger: AGGAAGAATACAGAAATTCCATGCCTGCATCCAGTT...GAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGAGCTGGAAAAGTACTTaGCAGAAACCCACGTTAGAA +
Preference number: 4 (lower is better)
Translates to: VILDCVNVYQTIYSTRETSWKST*QKPTLE
Trigger: TTCTAACGTGGGTTTCTGCCAAGTACTTTTCCAGCT...CGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR TCA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGCAGAAACTTCCGCACTaGTTTCCTCCTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPQKLPH*FPPVFL
Trigger: CAGAAACACAGGAGGAAATCAGTGCGGAAGTTTCTG...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp ACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACATTACCTTCACAGTTTTCCTCAACTaGTCAAGCTTCTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: TNFFHFHKNLLGFIHITFTVFLN*SSFSRI
Trigger: GATCCGAGAGAAGCTTGATCAGTTGAGGAAAACTGT...GAAGGTAATGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGTACTTTTTCTGCCTTTaGAGAAACTTCCGCACTGAT +
Preference number: 4 (lower is better)
Translates to: VILDCVNVYQTIYSTRETYFFCL*RNFRTD
Trigger: ATCAGTGCGGAAGTTTCTGCAAAGGCAGAAAAAGTA...CGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR TCA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACATAAAGGACTCCAAGTaGTCCATTGCATCTAATTCA +
Preference number: 4 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDIKDSK*SIASNS
Trigger: TGAATTAGATGCAATGGATCACTTGGAGTCCTTTAT...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR GCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACAGTCTCTTTCTTTACTTaGAATCTCATAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTVSFFT*NLIICS
Trigger: CGAGCAGATTATGAGATTGCAAGTAAAGAAAGAGAC...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CCA 90 bp GATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACATCCATAAGAATCTTCTaGGATTCATCCACATTACCT +
Preference number: 4 (lower is better)
Translates to: DLFIPTQHDPGTQEQLCTSIRIF*DSSTLP
Trigger: AGGTAATGTGGATGAATCCCAGAAGATTCTTATGGA...TGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR TCA 90 bp ATTCTTCAAGACCTCAGCTGCAGAATTTTATGCCCGCTGTTGAAAAGTGTTAAAAGGAAGTCGGGGGAATaGTACATAAAAGTAAAGGTA +
Preference number: 4 (lower is better)
Translates to: ILQDLSCRILCPLLKSVKRKSGE*YIKVKV
Trigger: TACCTTTACTTTTATGTATCATTCCCCCGACTTCCT...TTTAACACTTTTCAACAGCGGGCATAAAATTCTGCAGCTGAGGTCTTGAAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp TCCGCCGACTCCACAGTTCGCGGAGGGGCACGGAGCCGCGGCGCCCGCCGGGGACAGACCCTCGCCTGGTaGGCCGCTCTGACTCACCGT +
Preference number: 5 (lower is better)
Translates to: SADSTVRGGARSRGARRGQTLAW*AALTHR
Trigger: ACGGTGAGTCAGAGCGGCCAACCAGGCGAGGGTCTG...TCCCCGGCGGGCGCCGCGGCTCCGTGCCCCTCCGCGAACTGTGGAGTCGGCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS CCA 90 bp CGGAGGCGACGGGGTCGGCCGCGACGACTTCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACGATGGTCGCGTCGGCCTCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RRRRGRPRRLLSGRR*QRRRQTMVASASSP
Trigger: TGGGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAGAAGTCGTCGCGGCCGACCCCGTCGCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000490762.5
ENST00000629543.2
CDS CCA 90 bp GACGACTTCTCTCAGGCAGGCGGTGGCAGCGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCCCACTCGGCTCTTTCCCGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: DDFSQAGGGSGVDKR*SRRPRAHSALSRRG
Trigger: CCCGCGGCGGGAAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAGAAGTCGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337351.8
ENST00000397783.5
CDS CCA 90 bp CTGGTTGGCCGCTCTGACTCACCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGACATGGTAGCC +
Preference number: 5 (lower is better)
Translates to: LVGRSDSPSRAVPMS*SSRARICAWADMVA
Trigger: GGCTACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGTGAGTCAGAGCGGCCAACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS CCA 90 bp ACCCTCTGTCTGGTTTCGTCTCCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGACATGGTAGCC +
Preference number: 5 (lower is better)
Translates to: TLCLVSSPSRAVPMS*SSRARICAWADMVA
Trigger: GGCTACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGAGACGAAACCAGACAGAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
CDS-3UTR CAA 90 bp TTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: FPLELSSLQSGGPRSLRPSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...CGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: REARRCPRLWLRERLRWRCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...GCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS CCA 90 bp GGCAGGCAAAGATACACTGAACCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGACATGGTAGCC +
Preference number: 5 (lower is better)
Translates to: GRQRYTEPSRAVPMS*SSRARICAWADMVA
Trigger: GGCTACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGTTCAGTGTATCTTTGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000490762.5
ENST00000629543.2
CDS CCA 90 bp AGGACTCCAAGTGATCCATTGCCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGACATGGTAGCC +
Preference number: 5 (lower is better)
Translates to: RTPSDPLPSRAVPMS*SSRARICAWADMVA
Trigger: GGCTACCATGTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGCAATGGATCACTTGGAGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430864.5
CDS-3UTR CAA 90 bp TGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: CPRLWLRERLRWRRCLSRSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...CCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCGGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS CCA 90 bp CCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTaGATGCCCGCTCTCTGGAGAACCGAAGGAGTCAGAGTAGTTACT +
Preference number: 5 (lower is better)
Translates to: PGALARSARSPRTPL*MPALWRTEGVRVVT
Trigger: AGTAACTACTCTGACTCCTTCGGTTCTCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGAGGGCCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442701.1
CDS-3UTR CAA 90 bp GTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCTCCTGGAGAACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: VGALKPPVRGPSLAPPALLENSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCAG...GAGAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS-3UTR CAA 90 bp CGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGCGCTCTCTGGAGAACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: RLWLRERLRWRRCLSRDRRSLEN*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCG...CCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TCGCTCGCTCCGCCCGCTCTCCCAGGACTCCTCTCTGGATGCCCGCTCTCTGGAGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SLAPPALPGLLSGCPLSGEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...TCCAGAGAGCGGGCATCCAGAGAGGAGTCCTGGGAGAGCGGGCGGAGCGAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp CGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: REAIFPLELSSLQSGGPRCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...GCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SPASFSSDLREAIFPLELSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...GAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGGCTGTGGCTCCTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: CISHFGPGKPDDVPGCGSCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...GGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCAGTTTACGGTTCCCCTaGCAATGGTACAGAACCAGA +
Preference number: 5 (lower is better)
Translates to: CGSGNGCGGADVYLGTGTSLRFP*QWYRTR
Trigger: TCTGGTTCTGTACCATTGCAAGGGGAACCGTAAACT...GGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCCCGGAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp CAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: QTIYSTRETGSDLAGLLLSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...GAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGATCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp CAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGAGGGCTCACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: QTLGTQRRAHSWLQLPKERAHSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCT...CTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp CCGTTGGAGCTCTCAAGCCTCCAGTCCGGGGGCCCTCGCTCGCTCCGCCCGCTCATAGAGGGGCCACAATaGTTCAGTTTGTATGAAATA +
Preference number: 5 (lower is better)
Translates to: PLELSSLQSGGPRSLRPLIEGPQ*FSLYEI
Trigger: TATTTCATACAAACTGAACAATTGTGGCCCCTCTAT...GAGCGGGCGGAGCGAGCGAGGGCCCCCGGACTGGAGGCTTGAGAGCTCCAACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp TCTCCTAAATCCATGCGCGTCCCAGCCAGGATGTCATGGGGGCAGCAGTCCAGAAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SPKSMRVPARMSWGQQSRNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...TCTGGACTGCTGCCCCCATGACATCCTGGCTGGGACGCGCATGGATTTAGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PWEHREGLTPGCSYRRSQCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp CTCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGATGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSRPWEHREGLTPGCSYRCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...TCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp GCCCGCTCTCTGGAGAACTTGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGACGCTCTCTGGAGAACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: ARSLENLYFALRSREARRRSLEN*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCG...TCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SDYLQHPGDGFRSRRPPSEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...AGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp CCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PPSLLTSVKPSSRWSSQAEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...GGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp TCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTAGGGCTCACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SDYLQHPGDGFRSRRPPSRAHSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCT...AGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CAA 90 bp GGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTACAACCATCATGATCTaGAGCTCCTCCCTACACAGT +
Preference number: 5 (lower is better)
Translates to: GTAAVAPMSISGPGPGQFTTIMI*SSSLHS
Trigger: ACTGTGTAGGGAGGAGCTCAAGATCATGATGGTTGT...AAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCACCGCAGCCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp GAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: ERLSDYLQHPGDGFRSRRSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...CCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: LGTQRRAHSWLQLPKESENPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...CTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp TCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGAGCTCTCAAGCCTCGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SFSSDLREAIFPLELSSLEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...GAGGCTTGAGAGCTCCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp TTCTTGATCCCGACCTCCTGCTCAGACGCTCCTCCCGTTCCCTCTCCTCTCTCCCTTTCTGCAACTCCCTaGCAGATTGATGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: FLIPTSCSDAPPVPSPLSLSATP*QIDVGR
Trigger: CCTGCCTACATCAATCTGCAAGGGAGTTGCAGAAAG...GGAGAGAGGAGAGGGAACGGGAGGAGCGTCTGAGCAGGAGGTCGGGATCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGCGGTCATCTGTAAACTaGACCCTCTGTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: QQTLGTQRRAHSWLQLPKRSSVN*TLCLVS
Trigger: CGAAACCAGACAGAGGGTCAAGTTTACAGATGACCG...CTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCCTTTCTGCAACTCCCTaGCAGATTGATGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVLSATP*QIDVGR
Trigger: CCTGCCTACATCAATCTGCAAGGGAGTTGCAGAAAG...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CAA 90 bp CCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGCGGTCATCTGTAAACTaGACCCTCTGTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: PKCNLPPKWSARRRSLSWRSSVN*TLCLVS
Trigger: CGAAACCAGACAGAGGGTCAAGTTTACAGATGACCG...CCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp GACAATTTCCGTCGCTCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: DNFRRSREVDLDRLRRRSSQSSY*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTAACTACTCTGACT...GGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAGAGCGACGGAAATTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CAA 90 bp TCTGCCAGCCGCTTCTTGGCGAGCTCAGTTCTCCGATCACATTCAGCAATAAAGAGGGCTCACTCCTGGTaGCAGCTACCGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: SASRFLASSVLRSHSAIKRAHSW*QLPKES
Trigger: TGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCT...CTTTATTGCTGAATGTGATCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CAA 90 bp AGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTCTTTCTGCAACTCCCTaGCAGATTGATGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RLFTAPGRRVQISPASFSLSATP*QIDVGR
Trigger: CCTGCCTACATCAATCTGCAAGGGAGTTGCAGAAAG...AGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000629543.2
CDS GCA 90 bp GCCCTCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTaGAGCTACCGAAGGAGTCAGAGTAGTTACTTGTATTTCGCACTT +
Preference number: 5 (lower is better)
Translates to: ALSRPWEHREGLTPG*SYRRSQSSYLYFAL
Trigger: AAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CAA 90 bp TTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCCGGTCATCTGTAAACTaGACCCTCTGTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: FIRLFTAPGRRVQISPASRSSVN*TLCLVS
Trigger: CGAAACCAGACAGAGGGTCAAGTTTACAGATGACCG...GGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp AGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGTTGGGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: RSRRPPSLLTSVKPSSRWAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...CCAACGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PWEHREGLTPGCSYRRSQSQSSY*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTAACTACTCTGACT...CTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVSQSSY*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTAACTACTCTGACT...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp GTTCAGATCTCGCCGGCCTCCTTCTCTTCTGACCTCCGTGAAGCCATCTTCCCGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: VQISPASFSSDLREAIFPSQSSY*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTAACTACTCTGACT...CGGGAAGATGGCTTCACGGAGGTCAGAAGAGAAGGAGGCCGGCGAGATCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000442701.1
CDS-3UTR CAA 90 bp TCAGCAGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAAGCACCAAAAGGCCATaGGCTCCACATATACATGTG +
Preference number: 5 (lower is better)
Translates to: SADPGNTEKGSLLVAATESTKRP*APHIHV
Trigger: CACATGTATATGTGGAGCCAATGGCCTTTTGGTGCT...TTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR CAA 90 bp GTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAACTTTCTGCAACTCCCTaGCAGATTGATGTAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VTCHRSGLPGDGHCHGDQLSATP*QIDVGR
Trigger: CCTGCCTACATCAATCTGCAAGGGAGTTGCAGAAAG...TTGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS TCA 90 bp AGACGCTCCTCCCGTTCCCTCTCCTCTCTCCTCCTCAAGCGATCCTaGTTTCTCTTCTCCTGCTTTTCAGCGACAGTTTTCTCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: RRSSRSLSSLLLKRS*FLFSCFSATVFSAS
Trigger: AGAAGCTGAGAAAACTGTCGCTGAAAAGCAGGAGAAGAGAAATCAGGATCGCTTGAGGAGGAGAGAGGAGAGGGAACGGGAGGAGCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429378.5
CDS-3UTR CAA 90 bp AGACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: RPWEHREGLTPGCSYRRSAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...ACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp CCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: PGNTEKGSLLVAATEGVRAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...TCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp TTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTACATTCTCTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: LQSHNLLGGPSRGFWYILSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...GAGAATGTACCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LCERLSDYLQHPGDGFRSEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...AGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp CTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCCTCCTTCTCTTCTAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: LFTAPGRRVQISPASFSSSQSSY*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTAACTACTCTGACT...AGAAGAGAAGGAGGCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000442701.1
CDS-3UTR CAA 90 bp TGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: WEHREGLTPGCSYRRSQSAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...ACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397780.5
ENST00000419516.5
CDS-3UTR CAA 90 bp TGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGTCATGGAGACCAGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: CNLPPKWSARRRSLSWRPAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...TGGTCTCCATGACAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTTGTATTTCGCACTTCTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLVAATEGVRVVTCISHFCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...GAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419516.5
CDS-3UTR CAA 90 bp GACCCTGGGAACACAGAGAAGGGCTCACTCCTGGTTGCAGCTACCGAAGGAGTCATTCACCTGGATGATTaGCAGACTATCATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: DPGNTEKGSLLVAATEGVIHLDD*QTIISV
Trigger: CACAGAAATGATAGTCTGCAAATCATCCAGGTGAAT...GACTCCTTCGGTAGCTGCAACCAGGAGTGAGCCCTTCTCTGTGTTCCCAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397780.5
CDS-3UTR CAA 90 bp AACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCGGCGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: NVYQTIYSTRETGSDLAGAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...GCCGGCGAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CTCAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: LRRQHQIYLFLLNMTREHNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...GTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp TTTCTTTACTTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: FLYLQSHNLLGGPSRGFWNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...CCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAAGTAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp GCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: ASDLFIPTQHDPGTQEQLCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...GAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TTTCTTTACTTGCAATCTCATAATCTGCTCGGAGGGCCAAGTCGTGGATTTTGGTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FLYLQSHNLLGGPSRGFWCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...CCAAAATCCACGACTTGGCCCTCCGAGCAGATTATGAGATTGCAAGTAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp AATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTGCGATCTCTGGTTCTaGATCCCGACCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NFRLCERLSDYLQHPGDGCDLWF*IPTSCS
Trigger: TGAGCAGGAGGTCGGGATCAAGAACCAGAGATCGCA...CCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTAGGAGGCCAACCAGACTaGCCCACCACATATGGAGTG +
Preference number: 5 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVGGQPD*PTTYGV
Trigger: CACTCCATATGTGGTGGGCAAGTCTGGTTGGCCTCC...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337351.8
CDS-3UTR CAA 90 bp ATGAACCCCAAGTGTAACTTGCCACCGAAGTGGTCTGCCAGGCGACGGTCATTGAGCAGGTATATAGTTTaGCAAAGATGCAACCGCTTT +
Preference number: 5 (lower is better)
Translates to: MNPKCNLPPKWSARRRSLSRYIV*QRCNRF
Trigger: AAAGCGGTTGCATCTTTGCAAAACTATATACCTGCT...CAATGACCGTCGCCTGGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp CAGGAGGCAGCATCAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGCGGTCATCTGTAAACTaGACCCTCTGTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: QEAASDLFIPTQHDPGTQRSSVN*TLCLVS
Trigger: CGAAACCAGACAGAGGGTCAAGTTTACAGATGACCG...CTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTGATGCTGCCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp ATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCTAGAACGGTCATCTGTAAACTaGACCCTCTGTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: IPTQHDPGTQEQLCTLLERSSVN*TLCLVS
Trigger: CGAAACCAGACAGAGGGTCAAGTTTACAGATGACCG...TTCTAGAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp GGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GNFRLCERLSDYLQHPGDNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...GTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp CAGATTTATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTAAACCCCAAGTGTAACTaGCCACCGAAGTGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: QIYLFLLNMTREHRSNSVNPKCN*PPKWSA
Trigger: GGCAGACCACTTCGGTGGCAAGTTACACTTGGGGTT...TACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATAAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp TATTTATTCCTACTCAACATGACCCGGGAACACAGGAGCAACTCTGTACACTTCCGCTCTCTGGAGAACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: YLFLLNMTREHRSNSVHFRSLEN*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCG...GAAGTGTACAGAGTTGCTCCTGTGTTCCCGGGTCATGTTGAGTAGGAATAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS-3UTR CAA 90 bp AAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGAAGCCATCTTCCCGTaGGAGCTCTCAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: KGNFRLCERLSDYLQHPGEAIFP*ELSSLQ
Trigger: CTGGAGGCTTGAGAGCTCCAACGGGAAGATGGCTTC...TCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000429378.5
ENST00000442701.1
ENST00000629543.2
CDS-3UTR CAA 90 bp TGTGTGAACGTTTATCAGACTATTTACAGCACCCGGGAGACGGGTTCAGATCTCGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: CVNVYQTIYSTRETGSDLAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...GAGATCTGAACCCGTCTCCCGGGTGCTGTAAATAGTCTGATAAACGTTCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGTCTGCCAGCCGCTTCTaGGCGAGCTCAGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPSASRF*ASSVLR
Trigger: TCGGAGAACTGAGCTCGCCAAGAAGCGGCTGGCAGA...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS-3UTR CAA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGCGCTCTCTGGAGAACTaGTATTTCGCACTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPRSLEN*YFALRS
Trigger: GGACCGAAGTGCGAAATACAAGTTCTCCAGAGAGCG...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293872.13
ENST00000426094.5
ENST00000429378.5
ENST00000629543.2
CDS TCA 90 bp AGTGATCCATTGCCTAGCACGGGAAAAGCACAGCGCTATAATCAATaGTGTGTAAAGCGTAAAGTCTTAGAACCCATTTGCTTGATAGGA +
Preference number: 5 (lower is better)
Translates to: SDPLPSTGKAQRYNQ*CVKRKVLEPICLIG
Trigger: TCCTATCAAGCAAATGGGTTCTAAGACTTTACGCTTTACACATCATTGATTATAGCGCTGTGCTTTTCCCGTGCTAGGCAATGGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495349.5
CDS-3UTR CAA 90 bp TTCTTCGCACGAACTTTTTCCACTTCCATAAGAATCTTCTGGGATTCATCCACAAAAGGAAAAGTTTTCTaGCCCACACCTGCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: FFARTFSTSIRIFWDSSTKGKVF*PTPAVR
Trigger: CCTTACTGCAGGTGTGGGCAAGAAAACTTTTCCTTT...TGTGGATGAATCCCAGAAGATTCTTATGGAAGTGGAAAAAGTTCGTGCGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000426094.5
CDS-3UTR CAA 90 bp ATAAAGGGTAATTTTAGACTGTGTGAACGTTTATCAGACTATTTACAGCACCCGGCCAAGTCGTGGATTTaGGTACATTCTCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: IKGNFRLCERLSDYLQHPAKSWI*VHSPKS
Trigger: GGATTTAGGAGAATGTACCAAAATCCACGACTTGGC...CGGGTGCTGTAAATAGTCTGATAAACGTTCACACAGTCTAAAATTACCCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000426094.5
ENST00000629543.2
CDS TCA 90 bp TTTTTGAGGCTAGTTATATCATGGAGAATCACACTTAATGAGATCTaGCTCCATCACTGTACCAAAGAAGTCAAGGAGTCAGACGTAAAC +
Preference number: 5 (lower is better)
Translates to: FLRLVISWRITLNEI*LHHCTKEVKESDVN
Trigger: GTTTACGTCTGACTCCTTGACTTCTTTGGTACAGTGATGGAGTCAGATCTCATTAAGTGTGATTCTCCATGATATAACTAGCCTCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397780.5
ENST00000443357.5
ENST00000469109.1
ENST00000490762.5
CDS CCA 72 bp CGGGGTCGGCCGCGACGACTTCTCTCAGGCAGGCGGTaGCAGCGGCGTCGACAAACGATGGTCGCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: RGRPRRLLSGRR*QRRRQTMVASA
Trigger: GGCCGACGCGACCATCGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGAGAAGTCGTCGCGGCCGACCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
ENST00000419516.5
ENST00000426094.5
ENST00000490762.5
ENST00000629543.2
CDS CCA 72 bp CGCTCTGACTCACCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: RSDSPSRAVPMS*SSRARICAWAD
Trigger: GTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGTGAGTCAGAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000494545.1
CDS CCA 72 bp CTGGTTTCGTCTCCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: LVSSPSRAVPMS*SSRARICAWAD
Trigger: GTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGAGACGAAACCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293872.13
ENST00000337351.8
ENST00000397783.5
CDS TCA 72 bp CACTCCCACCCCAGACCCTCGCCTGGTTGGCCGCTCTaGCTCACCGTCCCGAGCCGTGCCCATGAGCTGGTC +
Preference number: 6 (lower is better)
Translates to: HSHPRPSPGWPL*LTVPSRAHELV
Trigger: GACCAGCTCATGGGCACGGCTCGGGACGGTGAGTCAGAGCGGCCAACCAGGCGAGGGTCTGGGGTGGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426094.5
ENST00000494545.1
CDS CCA 72 bp AGTGATCCATTGCCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: SDPLPSRAVPMS*SSRARICAWAD
Trigger: GTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGCAATGGATCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430864.5
CDS CCA 72 bp TCTCAGGCAGGCGGTGGCAGCGGCGTCGACAAACGATaGTCGCGTCGGCCTCGAGCCCACTCGGCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: SQAGGGSGVDKR*SRRPRAHSALS
Trigger: GGAAAGAGCCGAGTGGGCTCGAGGCCGACGCGACCATCGTTTGTCGACGCCGCTGCCACCGCCTGCCTGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337351.8
ENST00000397783.5
ENST00000490762.5
CDS CCA 72 bp AGATACACTGAACCGTCCCGAGCCGTGCCCATGAGCTaGTCCAGCAGGGCCCGCATCTGCGCCTGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: RYTEPSRAVPMS*SSRARICAWAD
Trigger: GTCCGCCCAGGCGCAGATGCGGGCCCTGCTGGACCAGCTCATGGGCACGGCTCGGGACGGTTCAGTGTATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418978.5
ENST00000419516.5
ENST00000490762.5
ENST00000629543.2
CDS TCA 72 bp GTGACCTCCTGCGATCTCTGGTTCTTGATCCCGACCTaGGGTCACGAGCTGGAGACCAGCCTGGACAACGTG +
Preference number: 6 (lower is better)
Translates to: VTSCDLWFLIPT*GHELETSLDNV
Trigger: CACGTTGTCCAGGCTGGTCTCCAGCTCGTGACCTCAGGTCGGGATCAAGAACCAGAGATCGCAGGAGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490762.5
CDS CAA 90 bp TGGAGAACTCCTGGTTGCAGCTACCGAAGGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGATGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: WRTPGCSYRRSQSSY*YFALRSREARRCPR
Trigger: CCGGGGACATCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTAGCTGCAACCAGGAGTTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397783.5
CDS CAA 72 bp CGCTCTCTGGAGAACCGAAGGAGTCAGAGTAGTTACTaGTATTTCGCACTTCGGTCCCGGGAAGCCCGACGA +
Preference number: 6 (lower is better)
Translates to: RSLENRRSQSSY*YFALRSREARR
Trigger: TCGTCGGGCTTCCCGGGACCGAAGTGCGAAATACAAGTAACTACTCTGACTCCTTCGGTTCTCCAGAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442701.1
CDS CAA 72 bp GGAGTCAGACGTAAACAGCTGAGCACCAAAAGGCCATaGGCTCCACATATACATGTGGCAATGAGACTGCAA +
Preference number: 6 (lower is better)
Translates to: GVRRKQLSTKRP*APHIHVAMRLQ
Trigger: TTGCAGTCTCATTGCCACATGTATATGTGGAGCCAATGGCCTTTTGGTGCTCAGCTGTTTACGTCTGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397780.5
ENST00000443357.5
ENST00000490762.5
CDS CAA 90 bp AGAAGTCAAGGAGTCAGACGTAAACAGCTGAGCACCAAAAGGCCATaGGCTCCACATATACATGTGGCAATGAGACTGCAAAACCCAAGC +
Preference number: 6 (lower is better)
Translates to: RSQGVRRKQLSTKRP*APHIHVAMRLQNPS
Trigger: GCTTGGGTTTTGCAGTCTCATTGCCACATGTATATGTGGAGCCAATGGCCTTTTGGTGCTCAGCTGTTTACGTCTGACTCCTTGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397780.5
ENST00000490762.5
CDS CCA 72 bp ACTGACAGGACGCTGGACACAACATATAAACAGTACTaGCTGTATTCTAGCTCTGAGCTTGAGTGGCAGGAT +
Preference number: 6 (lower is better)
Translates to: TDRTLDTTYKQY*LYSSSELEWQD
Trigger: ATCCTGCCACTCAAGCTCAGAGCTAGAATACAGCCAGTACTGTTTATATGTTGTGTCCAGCGTCCTGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469109.1
CDS TCA 72 bp ACCCAAGCTAATCAGAGGTCCATGAACCACCAAGGGTaGCTTATAGAGCTGGTAATTTCCACCAACAAAAGC +
Preference number: 6 (lower is better)
Translates to: TQANQRSMNHQG*LIELVISTNKS
Trigger: GCTTTTGTTGGTGGAAATTACCAGCTCTATAAGTCACCCTTGGTGGTTCATGGACCTCTGATTAGCTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490762.5
CDS GCA 72 bp CATACTGTACCCATCTGCATTCTTCAAGACCTCAGCTaGAGAATTTTATGCCCGCTGTTGAAAAGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: HTVPICILQDLS*RILCPLLKSVK
Trigger: TTTAACACTTTTCAACAGCGGGCATAAAATTCTGCAGCTGAGGTCTTGAAGAATGCAGATGGGTACAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490762.5
CDS CCA 72 bp AAACAGTACTGGCTGTATTCTAGCTCTGAGCTTGAGTaGCAGGATAACAAGCAACTACCTTATTATTTTGCT +
Preference number: 6 (lower is better)
Translates to: KQYWLYSSSELE*QDNKQLPYYFA
Trigger: AGCAAAATAATAAGGTAGTTGCTTGTTATCCTGCCACTCAAGCTCAGAGCTAGAATACAGCCAGTACTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469109.1
CDS CAA 90 bp TGGACACAACATATAAACAGTACTGGCTGTATTCTAGCTCTGAGCTaGAGTGGCAGGATAACAAGCAACTACCTTATTATTTTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: WTQHINSTGCILALS*SGRITSNYLIILLH
Trigger: ATGAAGCAAAATAATAAGGTAGTTGCTTGTTATCCTGCCACTCAAGCTCAGAGCTAGAATACAGCCAGTACTGTTTATATGTTGTGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469109.1
CDS TCA 72 bp CTAGTTATATCATGGAGAATCACACTTAATGAGATCTaGCTCCATCACTGTACCAAAGAAGTCAAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: LVISWRITLNEI*LHHCTKEVKES
Trigger: TGACTCCTTGACTTCTTTGGTACAGTGATGGAGTCAGATCTCATTAAGTGTGATTCTCCATGATATAACTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397780.5
ENST00000443357.5
ENST00000469109.1
ENST00000490762.5
CDS CAA 72 bp CATATAAACAGTACTGGCTGTATTCTAGCTCTGAGCTaGAGTGGCAGGATAACAAGCAACTACCTTATTATT +
Preference number: 6 (lower is better)
Translates to: HINSTGCILALS*SGRITSNYLII
Trigger: AATAATAAGGTAGTTGCTTGTTATCCTGCCACTCAAGCTCAGAGCTAGAATACAGCCAGTACTGTTTATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469109.1