Pregenerated sensors for LTV1 (Homo sapiens)
Ensembl gene IDs: ENSG00000135521Ensembl transcript IDs: ENST00000367576.6
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TTTGTCTTTCTGAAGTTTCTAGTCAATAACCAAAGATaGGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGC | + |
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Preference number: 3 (lower is better) Translates to: FVFLKFLVNNQR*GAPNKVPCPVC Trigger: GCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGACTAGAAACTTCAGAAAGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCAACAGGGGCGGCGATaGCACCCTCGAAGTCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLQQGRR*HPRSPA Trigger: CGCCGGACTTCGAGGGTGTCATCGCCGCCCCTGTTG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGAGGCCTCACCACACGTaGAGCCCCAGGACCCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLRPHHT*SPRTRR Trigger: TCGCCGGGTCCTGGGGCTGCACGTGTGGTGAGGCCT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCATCCTGTGAGGCATGCTaGAGCCGCGCGGCGCTCACC | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPSCEAC*SRAALT Trigger: GGTGAGCGCCGCGCGGCTGCAGCATGCCTCACAGGA...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGGGCTTTTTCTTCCTGTaGGGCATGCTGCAGCCGCGC | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLGFFFL*GMLQPR Trigger: GCGCGGCTGCAGCATGCCTCACAGGAAGAAAAAGCC...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGGGCAATAGAACCCTCTaGGGTGCACTCTCATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLGNRTL*GALSSA Trigger: AGCAGATGAGAGTGCACCCCAGAGGGTTCTATTGCC...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCTCCGGTGGACCAAGTaGAAAGACACAGCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLLRWTK*KDTAFF Trigger: GAAGAAAGCTGTGTCTTTTCACTTGGTCCACCGGAG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTCTGCTATAGCTCTGTaGGTTTTTCCGGGCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLSAIAL*VFPGTD Trigger: GTCTGTGCCCGGAAAAACTCACAGAGCTATAGCAGA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTTCATTGGCAGGTCTTaGTCCTCCAAGGGTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLFIGRS*SSKGSR Trigger: CCTTGAACCCTTGGAGGATCAAGACCTGCCAATGAA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGATCCAGTCGAGGTCCTaGAACTGGAGCTGCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLIQSRS*NWSCFI Trigger: AATAAAGCAGCTCCAGTTTCAGGACCTCGACTGGAT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGGTGCCTTGCCCTGTATaGTCCACTGTCTATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLVPCPV*STVYSF Trigger: AAAGCTATAGACAGTGGAGCATACAGGGCAAGGCAC...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAGAGCCCCTAATAAAGTaGCTTGCCCTGTATGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPEPLIK*LALYAP Trigger: TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTC...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTCATCGAATACTCCGTaGAGCGACTCTTTGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLSSNTP*SDSLFP Trigger: AGGAAACAAAGAGTCGCTTCACGGAGTATTCGATGA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGATTTCTCCTCATGACTaGGGAAGTCATCGAATACTC | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLISPHD*GSHRIL Trigger: GAGTATTCGATGACTTCCTCAGTCATGAGGAGAAAT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCGATTGCTGTCCACTTaGATAGAACCTTCCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLRLLST*IEPSNS Trigger: AGAATTGGAAGGTTCTATTCAAGTGGACAGCAATCG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCAGTTTGCTTTGCTGTaGGTCCTTTCTTTGGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLQFALL*VLSLVR Trigger: TCTTACCAAAGAAAGGACTCACAGCAAAGCAAACTG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGAGAACGTGGCTGAGTTaGTACTTTAGGAAGATCACT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLRTWLS*YFRKIT Trigger: AGTGATCTTCCTAAAGTATCAACTCAGCCACGTTCT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGGTCAATAACCAAAGATaGGGAGCCCCTAATAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLVNNQR*GAPNKV Trigger: CACTTTATTAGGGGCTCCTCATCTTTGGTTATTGAC...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTCTTCCTCTCCTGTTaGCTTATTGGCCTGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPLFLSC*LIGLKN Trigger: ATTCTTCAGGCCAATAAGGCAACAGGAGAGGAAGAG...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGATCAAGCTCATTCATTaGCAGGTCTTGATCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLIKLIH*QVLILQ Trigger: TTGGAGGATCAAGACCTGCCAATGAATGAGCTTGAT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAGTTGCCTTATTGGCCTaGAGAATAAAGTCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPVALLA*RIKSSS Trigger: TGAGGATGACTTTATTCTTCAGGCCAATAAGGCAAC...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR TCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAGTTCATTTCTCCTCATaGCTGAGGAAGTCATCGAAT | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPVHFSS*LRKSSN Trigger: ATTCGATGACTTCCTCAGTCATGAGGAGAAATGAAC...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCCAGAACAAGTGATCTaGTATAGCTCTGTGAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLPEQVI*YSSVSF Trigger: AAAACTCACAGAGCTATAGCAGATCACTTGTTCTGG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTCTTTCAGTTTGCTTTaGTGTGAGTCCTTTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLSFSLL*CESFLW Trigger: CCAAAGAAAGGACTCACAGCAAAGCAAACTGAAAGA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTATTTACAAGATGGTTaGCAGGGGACACTTACTAGT | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLYLQDG*QGTLTS Trigger: ACTAGTAAGTGTCCCCTGCCAACCATCTTGTAAATA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAAGAACCTTCCAATTCTaGATTATCCAGAGCTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPRTFQF*IIQSSN Trigger: ATTGGAGCTCTGGATAATGCAGAATTGGAAGGTTCT...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAACAATATTTACAAGATaGTTGGCAGGGGACACTTAC | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPTIFTR*LAGDTY Trigger: GTAAGTGTCCCCTGCCAACCATCTTGTAAATATTGT...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAATCATCATCAAGAGCTaGAACAATGTCAGGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPIIIKS*NNVRIK Trigger: TTTGATCCTGACATTGTTGCAGCTCTTGATGATGAT...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR GCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAAGTCATAGTCATCATTaGTATCTCCCTTCTCATCAT | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPSHSHH*YLPSHH Trigger: ATGATGAGAAGGGAGATAGCAATGATGACTATGACT...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGCTCAAGCAGATTATCTaGATCATCAAAGTCAAAATC | + |
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Preference number: 4 (lower is better) Translates to: ITKDEEPLIKCLALYAPLLKQII*IIKVKI Trigger: GATTTTGACTTTGATGATCCAGATAATCTGCTTGAG...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CCA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCAAATTTGTTTGGGCTTTaGTTGATACTTGATAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SITKDEEPLIKCLALYAPNLFGL*LILDKL Trigger: CAGCTTATCAAGTATCAACCAAAGCCCAAACAAATT...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACCTCTTCCTCTCCTGTaGCCTTATTGGCCTGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: SITKDEEPLIKCLALYAPPLPLL*PYWPEE Trigger: TTCTTCAGGCCAATAAGGCAACAGGAGAGGAAGAGG...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGATTCATTGGCAGGTCTaGATCCTCCAAGGGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: ITKDEEPLIKCLALYAPLIHWQV*ILQGFK Trigger: CTTGAACCCTTGGAGGATCAAGACCTGCCAATGAAT...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGGCGATTGCTGTCCACTaGAATAGAACCTTCCAATTC | + |
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Preference number: 5 (lower is better) Translates to: ITKDEEPLIKCLALYAPLAIAVH*NRTFQF Trigger: GAATTGGAAGGTTCTATTCAAGTGGACAGCAATCGC...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACATCAAGCTCATTCATaGGCAGGTCTTGATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SITKDEEPLIKCLALYAPHQAHS*AGLDPP Trigger: TGGAGGATCAAGACCTGCCAATGAATGAGCTTGATG...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACAATCCCACTTCTCTTaGGCTTCTTCAAGGACTACA | + |
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Preference number: 5 (lower is better) Translates to: SITKDEEPLIKCLALYAPQSHFS*ASSRTT Trigger: TGTAGTCCTTGAAGAAGCCAAAGAGAAGTGGGATTG...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | ATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTTGTTTGGGCTTTGGTaGATACTTGATAAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: ITKDEEPLIKCLALYAPLLFGLW*ILDKLW Trigger: CCACAGCTTATCAAGTATCAACCAAAGCCCAAACAA...CAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS-3UTR CAA 90 bp | TCAATAACCAAAGATGAGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCATCCACTCTTCGTTCCTaGCGCTCTTCTTTTATAGCT | + |
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Preference number: 5 (lower is better) Translates to: SITKDEEPLIKCLALYAPSTLRS*RSSFIA Trigger: AGCTATAAAAGAAGAGCGCAAGGAACGAAGAGTGGA...TGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS TCA 90 bp | GCAAACAGTTTTGTCTTTCTGAAGTTTCTAGTCAATAACCAAAGATaGGGAGCCCCTAATAAAGTGCCTTGCCCTGTATGCTCCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: ANSFVFLKFLVNNQR*GAPNKVPCPVCSTV Trigger: GACAGTGGAGCATACAGGGCAAGGCACTTTATTAGGGGCTCCTCATCTTTGGTTATTGACTAGAAACTTCAGAAAGACAAAACTGTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS CCA 90 bp | TACAGTAATCATTTCTTCCTCCTCAGACTCATCAAGCTCATTCATTaGCAGGTCTTGATCCTCCAAGGGTTCAAGGGTATTCAATTTTAC | + |
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Preference number: 5 (lower is better) Translates to: YSNHFFLLRLIKLIH*QVLILQGFKGIQFY Trigger: GTAAAATTGAATACCCTTGAACCCTTGGAGGATCAAGACCTGCCAATGAATGAGCTTGATGAGTCTGAGGAGGAAGAAATGATTACTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS GCA 90 bp | TTCATTCTCAGATTTCTGTATATCCATTCCCTCTTCCTCTCCTGTTaGCTTATTGGCCTGAAGAATAAAGTCATCCTCAAGCAGATTATC | + |
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Preference number: 5 (lower is better) Translates to: FILRFLYIHSLFLSC*LIGLKNKVILKQII Trigger: GATAATCTGCTTGAGGATGACTTTATTCTTCAGGCCAATAAGGCAACAGGAGAGGAAGAGGGAATGGATATACAGAAATCTGAGAATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS CCA 90 bp | TGCCTTATTGGCCTGAAGAATAAAGTCATCCTCAAGCAGATTATCTaGATCATCAAAGTCAAAATCATCATCAAGAGCTGCAACAATGTC | + |
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Preference number: 5 (lower is better) Translates to: CLIGLKNKVILKQII*IIKVKIIIKSCNNV Trigger: GACATTGTTGCAGCTCTTGATGATGATTTTGACTTTGATGATCCAGATAATCTGCTTGAGGATGACTTTATTCTTCAGGCCAATAAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS CCA 72 bp | CATTTCTTCCTCCTCAGACTCATCAAGCTCATTCATTaGCAGGTCTTGATCCTCCAAGGGTTCAAGGGTATT | + |
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Preference number: 6 (lower is better) Translates to: HFFLLRLIKLIH*QVLILQGFKGI Trigger: AATACCCTTGAACCCTTGGAGGATCAAGACCTGCCAATGAATGAGCTTGATGAGTCTGAGGAGGAAGAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS CAA 72 bp | TCATTTCTTCCTCCTCAGACTCATCAAGCTCATTCATaGGCAGGTCTTGATCCTCCAAGGGTTCAAGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: SFLPPQTHQAHS*AGLDPPRVQGY Trigger: ATACCCTTGAACCCTTGGAGGATCAAGACCTGCCAATGAATGAGCTTGATGAGTCTGAGGAGGAAGAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS TCA 72 bp | TCCTCAGACTCATCAAGCTCATTCATTGGCAGGTCTTaGTCCTCCAAGGGTTCAAGGGTATTCAATTTTACA | + |
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Preference number: 6 (lower is better) Translates to: SSDSSSSFIGRS*SSKGSRVFNFT Trigger: TGTAAAATTGAATACCCTTGAACCCTTGGAGGATCAAGACCTGCCAATGAATGAGCTTGATGAGTCTGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS GCA 72 bp | ATCTGGATCATCAAAGTCAAAATCATCATCAAGAGCTaGAACAATGTCAGGATCAAAATCCAGTCGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: IWIIKVKIIIKS*NNVRIKIQSRS Trigger: GGACCTCGACTGGATTTTGATCCTGACATTGTTGCAGCTCTTGATGATGATTTTGACTTTGATGATCCAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS GCA 72 bp | AGATTTCTGTATATCCATTCCCTCTTCCTCTCCTGTTaGCTTATTGGCCTGAAGAATAAAGTCATCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: RFLYIHSLFLSC*LIGLKNKVILK Trigger: CTTGAGGATGACTTTATTCTTCAGGCCAATAAGGCAACAGGAGAGGAAGAGGGAATGGATATACAGAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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| CDS GCA 72 bp | GCGATTGCTGTCCACTTGAATAGAACCTTCCAATTCTaGATTATCCAGAGCTCCAATTTCATCATCATCATA | + |
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Preference number: 6 (lower is better) Translates to: AIAVHLNRTFQF*IIQSSNFIIII Trigger: TATGATGATGATGAAATTGGAGCTCTGGATAATGCAGAATTGGAAGGTTCTATTCAAGTGGACAGCAATCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367576.6 |
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