RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198862

Ensembl transcript IDs: ENST00000361371.10, ENST00000389194.7, ENST00000389195.7, ENST00000475344.1, ENST00000483326.1, ENST00000614971.4

Found 577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCAACATCAGCTTCTGGCTCACTGATTTTCGCAACACAGATCTCTaGCAGTCTTTCCCAGAAATGTATCAGTACGTTCTCCAAGTTGTG +
Preference number: 1 (lower is better)
Translates to: LNISFWLTDFRNTDL*QSFPEMYQYVLQVV
Trigger: CACAACTTGGAGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAATCAGTGAGCCAGAAGCTGATGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR GCA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTaGCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAA +
Preference number: 1 (lower is better)
Translates to: LASQELRVSAKWLNS*PCCNPGSLRTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR TCA 90 bp AAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTTTAAGGGCTaGGAAGTAAGGAATTTGCAACTTGGTTCATTTCAAAGCAATGAT +
Preference number: 1 (lower is better)
Translates to: KHADPCSQSFFCFKG*EVRNLQLGSFQSND
Trigger: ATCATTGCTTTGAAATGAACCAAGTTGCAAATTCCTTACTTCTCAGCCCTTAAAGCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389195.7
3UTR-3UTR TCA 90 bp GTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTTTCGCTATCTGCTGCAGAACTaGCTGCTTGCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VRYTQNGLNISFWLTDFRYLLQN*LLAGWE
Trigger: CTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGATA...GCGAAAATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR GCA 90 bp TCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTTGAGAACTGCAGAACTGACTGCTTaGTGGGTGGGAGAAATCTCC +
Preference number: 2 (lower is better)
Translates to: SAKWLNSCPCCNPGSLRTAELTA*WVGEIS
Trigger: GGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC...AGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR GCA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTAAACAGCCTGGGGCTTaGGATTGGCATCAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: LASQELRVSAKWLNSCPCKQPGA*DWHQKW
Trigger: CCACTTCTGATGCCAATCGCAAGCCCCAGGCTGTTT...ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR TCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGACCCCTAAAGCATGCTaGTCCATGTTCCCAGAGCTT +
Preference number: 2 (lower is better)
Translates to: YRVTRARYLTATYFHEVGTPKAC*SMFPEL
Trigger: AAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGT...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
3UTR-3UTR GCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTATAGCTGGTATCTGCTaGAGAACTGACTGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: NRLDTPKTDSTSASGSLIIAGIC*RTDCLL
Trigger: CAGCAAGCAGTCAGTTCTGCAGCAGATACCAGCTAT...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR CCA 90 bp TTTTCGCAACACAGATCTCTGACAGTCTTTCCCAGAAATGTATCAGTACGTTCTTTTCCGTGTCTGCTTTaGCTTCCCAGGAACTTAGAG +
Preference number: 2 (lower is better)
Translates to: FSQHRSLTVFPRNVSVRSFPCLL*LPRNLE
Trigger: CTCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAA...AGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR CAA 90 bp TCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAAGGGATCAACGTGTGCATGTCTTCA +
Preference number: 2 (lower is better)
Translates to: SAKWLNSCPCCNPGS*RTASIKGINVCMSS
Trigger: TGAAGACATGCACACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTCCAATGCCTTTGTTTaGTGTACTTCAGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKSNAFV*CTSGIP
Trigger: AGGGATCCCTGAAGTACATCAAACAAAGGCATTGGA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCCAATGCCTTTGTTTaGTGTACTTCAGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSNAFV*CTSGIP
Trigger: AGGGATCCCTGAAGTACATCAAACAAAGGCATTGGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCATTTCTGAAGGCTaGAAAACATTTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFISEG*KTFAPP
Trigger: TGGGGGAGCAAATGTTTTTCAGCCTTCAGAAATGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTCATTTCTGAAGGCTaGAAAACATTTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFISEG*KTFAPP
Trigger: TGGGGGAGCAAATGTTTTTCAGCCTTCAGAAATGAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAGGCTGAAAAACATTTaGTCCCCCAAGTCTCTTATT +
Preference number: 2 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKRLKNI*SPKSLI
Trigger: AATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR GCA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 2 (lower is better)
Translates to: LASQELRVSAKWLNSCPCWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATAACCCTTGATAAATaGAGGCACCTTAAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSITLDK*RHLKVQ
Trigger: CTGAACTTTAAGGTGCCTCCATTTATCAAGGGTTAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CCA 90 bp GAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGAAATCTCCACATATTTaGTCACAGAAGTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: ELRVSAKWLNSCPCCNPGKSPHI*SQKSSV
Trigger: CACAGAAGACTTCTGTGACCAAATATGTGGAGATTT...CCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCAATGCCTTTGTTTaGTGTACTTCAGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSNAFV*CTSGIP
Trigger: AGGGATCCCTGAAGTACATCAAACAAAGGCATTGGA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGGCTGAAAAACATTTaGTCCCCCAAGTCTCTTATT +
Preference number: 2 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTRLKNI*SPKSLI
Trigger: AATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAACTGGGCAGGACACTaGATCTATAAATATAATTCG +
Preference number: 2 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKNWAGH*IYKYNS
Trigger: CGAATTATATTTATAGATGCAGTGTCCTGCCCAGTT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCTCTCAGTTCGTTTTaGTTCACTTGGACTATTCTA +
Preference number: 2 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSLSSF*FTWTIL
Trigger: TAGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTCGTTTTGCTTCACTTaGACTATTCTAAAACACAGA +
Preference number: 2 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKSFCFT*TILKHR
Trigger: TCTGTGTTTTAGAATAGTCCAAGTGAAGCAAAACGA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATAACCCTTGATAAATaGAGGCACCTTAAAGTTCAG +
Preference number: 2 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTITLDK*RHLKVQ
Trigger: CTGAACTTTAAGGTGCCTCCATTTATCAAGGGTTAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR GCA 72 bp GGAGGACACATAGCTGGTATCTGCTGCAGAACTGACTaGTTGCTGGGTGGGAGAAATCTCCACATATTTGGT +
Preference number: 3 (lower is better)
Translates to: GGHIAGICCRTD*LLGGRNLHIFG
Trigger: ACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGATACCAGCTATGTGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR TCA 72 bp CACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTaGTTTTCGCAACACAGATCTCTGACAGTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: HPKRTQHQLLAH*FSQHRSLTVFP
Trigger: GGGAAAGACTGTCAGAGATCTGTGTTGCGAAAATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR CAA 90 bp TTTTCGCAACACAGATCTCTGACAGTCTTTCCCAGAAATGTATCAGTACGTTCTTGCAGAACTGACTGCTaGCTGGGTGGGAGAAATCTC +
Preference number: 3 (lower is better)
Translates to: FSQHRSLTVFPRNVSVRSCRTDC*LGGRNL
Trigger: GAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCA...AGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATCCAATGCCTTTGTTaGATGTACTTCAGGGATCCC +
Preference number: 3 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKIQCLC*MYFRDP
Trigger: GGGATCCCTGAAGTACATCAAACAAAGGCATTGGAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATCCAATGCCTTTGTTaGATGTACTTCAGGGATCCC +
Preference number: 3 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTIQCLC*MYFRDP
Trigger: GGGATCCCTGAAGTACATCAAACAAAGGCATTGGAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTCTCTCAGTTCGTTTaGCTTCACTTGGACTATTCT +
Preference number: 3 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLSQFV*LHLDYS
Trigger: AGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAAGGCTGAAAAACATTaGCTCCCCCAAGTCTCTTAT +
Preference number: 3 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKKAEKH*LPQVSY
Trigger: ATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCTT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR TCA 72 bp AAATTCTCTGATATAGAGTTACTAGGGCCAGATATCTaGCAGCAACTTATTTTCATGAGGTGGGGAAGCAAG +
Preference number: 3 (lower is better)
Translates to: KFSDIELLGPDI*QQLIFMRWGSK
Trigger: CTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATATCAGAGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
3UTR-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATATCCAATGCCTTTGTTaGATGTACTTCAGGGATCCC +
Preference number: 3 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYIQCLC*MYFRDP
Trigger: GGGATCCCTGAAGTACATCAAACAAAGGCATTGGAT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR TCA 72 bp CTCACACATAGTACTTCACTCTCAACTATAATCCTCTaGCCACATTCATACTATTTCAATAGTCATTTTACC +
Preference number: 3 (lower is better)
Translates to: LTHSTSLSTIIL*PHSYYFNSHFT
Trigger: GGTAAAATGACTATTGAAATAGTATGAATGTGGTCAGAGGATTATAGTTGAGAGTGAAGTACTATGTGTGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCACAACTTCCGGCTTCTaGCGGCGGAAGAGGACACCC +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCTTSGF*RRKRTP
Trigger: GGGTGTCCTCTTCCGCCGCCAGAAGCCGGAAGTTGT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACCCCAGGAGGGGGTCATGGGATCCCTGATTTAGATGTACAGCTGGTTGGTCAGGGATTTGTGATGGACTaGGGGAGCTTGCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TPGGGHGIPDLDVQLVGQGFVMD*GSLLMN
Trigger: ATTCATCAGCAAGCTCCCTCAGTCCATCACAAATCC...CTGACCAACCAGCTGTACATCTAAATCAGGGATCCCATGACCCCCTCCTGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCTGCTGCAGAACTGACTaGTTGCTGGGTGGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACCCRTD*LLGGRN
Trigger: ATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCA...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCAAACAGCCTGGGGCTTaGGATTGGCATCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SAAELTACWVGEISTYLVKQPGA*DWHQKW
Trigger: CCACTTCTGATGCCAATCGCAAGCCCCAGGCTGTTT...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCACTCAGACCCCGGTTaGCACGTCCGGGACACAACT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGHSDPG*HVRDTT
Trigger: AGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCCAGTTTGCGGGTCACTaGGTGTATCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACQFAGH*VYQVFL
Trigger: AAGAAACACCTGATACACTCAGTGACCCGCAAACTG...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGCCCATGGTCGCGGTTaGAGCTGTACTCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEAHGRG*SCTLST
Trigger: AGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATGTTCTTCCCGCCCATaGTCGCGGTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQECSSRP*SRLQLY
Trigger: GTACAGCTGCAACCGCGACCATGGGCGGGAAGAACA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCAACTGTGGAATGCGCTaGCACAATGCAGAGACTAAC +
Preference number: 4 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACNCGMR*HNAETN
Trigger: GTTAGTCTCTGCATTGTGCCAGCGCATTCCACAGTT...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCAGCTGGGCAGACAATTaGGTCACTGTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACSWADN*VTVINA
Trigger: AGCATTGATGACAGTGACCCAATTGTCTGCCCAGCT...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR CAA 72 bp GGACACATAGCTGGTATCTGCTGCAGAACTGACTGCTaGCTGGGTGGGAGAAATCTCCACATATTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GHIAGICCRTDC*LGGRNLHIFGH
Trigger: GTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGATACCAGCTATGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAAGCTCGGCCACTGTTTaGAGGCCTCAGGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQESSATV*RPQVPF
Trigger: AAAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACCCCAGGAGGGGGTCATGGGATCCCTGATTTAGATGTACAGCTGGTTGGTCAGAGAAGTCTTCTGTGTTaGTTACTGATCATTGACGAG +
Preference number: 4 (lower is better)
Translates to: TPGGGHGIPDLDVQLVGQRSLLC*LLIIDE
Trigger: CTCGTCAATGATCAGTAATCAACACAGAAGACTTCT...CTGACCAACCAGCTGTACATCTAAATCAGGGATCCCATGACCCCCTCCTGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp GCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAATGGCTTCAGGTTGCTTaGTTGGAGGAAAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: AELTACWVGEISTYLVTEWLQVA*LEEKPL
Trigger: AAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCA...TTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCTGTTCCCTGTTCTTTaGCAAGGAGTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCLFPVL*QGVLQL
Trigger: GAGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGACAACTTCCGGCTTCTaGCGGCGGAAGAGGACACCC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKTTSGF*RRKRTP
Trigger: GGGTGTCCTCTTCCGCCGCCAGAAGCCGGAAGTTGT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCACTCAGACCCCGGTTaGCACGTCCGGGACACAACT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTHSDPG*HVRDTT
Trigger: AGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGTTGCAGCTGTACTCTaGGCACTCAGACCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKVAAVL*ALRPRL
Trigger: CAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAAC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGCTCGGCCACTGTTTaGAGGCCTCAGGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSSATV*RPQVPF
Trigger: AAAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGCCCATGGTCGCGGTTaGAGCTGTACTCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKAHGRG*SCTLST
Trigger: AGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTCATCAACTGTGGAATaGGCTGGCACAATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCSSTVE*AGTMQR
Trigger: TCTCTGCATTGTGCCAGCGCATTCCACAGTTGATGA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCAAATGGTTAAATAGCTaGCCATGTTGCAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACKWLNS*PCCNPG
Trigger: CCCAGGATTGCAACATGGGCAGCTATTTAACCATTT...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCATCTTTTTCCGTGTCTaGTTTGGCTTCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SAAELTACWVGEISTYLVIFFRV*FGFPGT
Trigger: AGTTCCTGGGAAGCCAAAGCAGACACGGAAAAAGAT...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp ATCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTTGCTGCAAACGCAGCTaGTGTGTAAGTATCACACTG +
Preference number: 4 (lower is better)
Translates to: ICCRTDCLLGGRNLHIFGCCKRS*CVSITL
Trigger: CAGTGTGATACTTACACACCAGCTGCGTTTGCAGCA...ACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCTCTTTCATCAACTGTaGAATGCGCTGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCLFHQL*NALAQC
Trigger: GCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp GCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAACTCTTTCATCAACTGTaGAATGCGCTGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: AELTACWVGEISTYLVTELFHQL*NALAQC
Trigger: GCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAG...TTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCCCATGTTGCAATCCTaGGTCTTTGAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCPMLQS*VFENCI
Trigger: GATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACCAACTTTGGATTTGTaGTGGACTGAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEPTLDL*WTEGAC
Trigger: GCAAGCTCCCTCAGTCCATCACAAATCCAAAGTTGG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTGTACTTCACTTACTaGCCCTCAGAGGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLYFTY*PSEAQG
Trigger: GCCTTGAGCCTCTGAGGGTCAGTAAGTGAAGTACAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAACCCCTAAAGCATGCTaGTCCATGTTCCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQETPKAC*SMFPEL
Trigger: AAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp TTTTCGCAACACAGATCTCTGACAGTCTTTCCCAGAAATGTATCAGTACGTTCTTATCTGCTGCAGAACTaGCTGCTTGCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FSQHRSLTVFPRNVSVRSYLLQN*LLAGWE
Trigger: CTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGATA...AGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCAAATGCATCTTTTGCTaGAAACGCAGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SAAELTACWVGEISTYLVKCIFC*KRSWCV
Trigger: TACACACCAGCTGCGTTTGCAGCAAAAGATGCATTT...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATGGCTTCAGGTTGCTTaGTTGGAGGAAAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEWLQVA*LEEKPL
Trigger: AAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp ACCTGTAATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCAGCTATGGCTTCAGGTTaGTTGCTTGGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TCNRLDTPKTDSTSASGSAMASG*LLGGKA
Trigger: GGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGC...TGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATTACAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp GTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTTTCGCTCATCAACTGTGGAATaGGCTGGCACAATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VRYTQNGLNISFWLTDFRSSTVE*AGTMQR
Trigger: TCTCTGCATTGTGCCAGCGCATTCCACAGTTGATGA...GCGAAAATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCAATAGCTGCCCATGTTaGAATCCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCNSCPC*NPGSLR
Trigger: TCTCAAAGACCCAGGATTGCAACATGGGCAGCTATT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCATCTTTTTCCGTGTCTaGTTTGGCTTCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCIFFRV*FGFPGT
Trigger: AGTTCCTGGGAAGCCAAAGCAGACACGGAAAAAGAT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTGCAGAACTGACTGCTTaGTGGGTGGGAGAAATCTCC +
Preference number: 4 (lower is better)
Translates to: NRLDTPKTDSTSASGSLIAELTA*WVGEIS
Trigger: GGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGTTCTTCCCGCCCATaGTCGCGGTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCSSRP*SRLQLY
Trigger: GTACAGCTGCAACCGCGACCATGGGCGGGAAGAACA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAGCTTCCCAGAGAGCTaGGCAGACAATTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGSFPES*ADNWVT
Trigger: AGTGACCCAATTGTCTGCCCAGCTCTCTGGGAAGCT...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTGCCCATGTTGCAATCCTaGGTCTTTGAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: LAGWEKSPHIWSQKSSVLPMLQS*VFENCI
Trigger: GATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG...CAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp CCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAAGGGATCAACGTGAACTGACTGCTTGCTaGGTGGGAGAAATCTCCACA +
Preference number: 4 (lower is better)
Translates to: PMLQSWVFENCINKRDQRELTAC*VGEIST
Trigger: TGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTC...ACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCACTCAGACCCCGGTTaGCACGTCCGGGACACAACT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYHSDPG*HVRDTT
Trigger: AGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGCTCGGCCACTGTTTaGAGGCCTCAGGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSSATV*RPQVPF
Trigger: AAAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACAGTTTGCGGGTCACTaGGTGTATCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEQFAGH*VYQVFL
Trigger: AAGAAACACCTGATACACTCAGTGACCCGCAAACTG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGGATTTGTGATGGACTaGGGGAGCTTGCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEGFVMD*GSLLMN
Trigger: ATTCATCAGCAAGCTCCCTCAGTCCATCACAAATCC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGAGCTCTTCGGCTTCTaGAGCACCTGTAATAGGTTA +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEELFGF*STCNRL
Trigger: TAACCTATTACAGGTGCTTCAGAAGCCGAAGAGCTC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGGCCAAATCACAGCTaGCACAGGCAAACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRPNHS*HRQTVA
Trigger: TGCAACTGTTTGCCTGTGTCAGCTGTGATTTGGCCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCAGTTCCGCCACTGCTaGACAGCTACTCCTACTCTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKQFRHC*TATPTL
Trigger: AAGAGTAGGAGTAGCTGTTCAGCAGTGGCGGAACTG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATCTTCCACACAGATGTaGGTATTTGCACTTCACGGC +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQESSTQM*VFALHG
Trigger: GCCGTGAAGTGCAAATACTCACATCTGTGTGGAAGA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCTAGGGCCAGATATCTaGCAGCAACTTATTTTCATG +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCLGPDI*QQLIFM
Trigger: CATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTTTCCCCAAATTCTCTaGTATAGAGTTACTAGGGCC +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCFPQIL*YRVTRA
Trigger: GGCCCTAGTAACTCTATATCAGAGAATTTGGGGAAA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTCCCTTTAGTTCGCTaGTTGTTCTTCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFPLVR*LFFPPM
Trigger: CATGGGCGGGAAGAACAAGCAGCGAACTAAAGGGAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCAAATGCATCTTTTGCTaGAAACGCAGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCKCIFC*KRSWCV
Trigger: TACACACCAGCTGCGTTTGCAGCAAAAGATGCATTT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGGCTATGGCTTCAGGTTaGTTGCTTGGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGAMASG*LLGGKA
Trigger: GGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGC...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCAAATGGTTAAATAGCTaGCCATGTTGCAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCKWLNS*PCCNPG
Trigger: CCCAGGATTGCAACATGGGCAGCTATTTAACCATTT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCGGAACTTCCAATCACTaGTCAGGAAGAGGATTTTCT +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCGTSNH*SGRGFS
Trigger: AGAAAATCCTCTTCCTGAGCAGTGATTGGAAGTTCC...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATGCTGCAAACGCAGCTaGTGTGTAAGTATCACACTG +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQECCKRS*CVSITL
Trigger: CAGTGTGATACTTACACACCAGCTGCGTTTGCAGCA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAAGCTGGGCAGACAATTaGGTCACTGTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQESWADN*VTVINA
Trigger: AGCATTGATGACAGTGACCCAATTGTCTGCCCAGCT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp TTTTCGCAACACAGATCTCTGACAGTCTTTCCCAGAAATGTATCAGTACGTTCTAGCTTCCCAGAGAGCTaGGCAGACAATTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FSQHRSLTVFPRNVSVRSSFPES*ADNWVT
Trigger: AGTGACCCAATTGTCTGCCCAGCTCTCTGGGAAGCT...AGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCGAGCTTGCTGATGAATaGCAGAAGGTAAGGATATAT +
Preference number: 4 (lower is better)
Translates to: SAAELTACWVGEISTYLVELADE*QKVRIY
Trigger: ATATATCCTTACCTTCTGCCATTCATCAGCAAGCTC...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAACAACTTCCGGCTTCTaGCGGCGGAAGAGGACACCC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLTTSGF*RRKRTP
Trigger: GGGTGTCCTCTTCCGCCGCCAGAAGCCGGAAGTTGT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGTTGCAGCTGTACTCTaGGCACTCAGACCCCGGTTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYVAAVL*ALRPRL
Trigger: CAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAAC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCAGTTTGCGGGTCACTaGGTGTATCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSQFAGH*VYQVFL
Trigger: AAGAAACACCTGATACACTCAGTGACCCGCAAACTG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTTCGCAACACAGATCTCTGACAGTCTTTCCCAGAAATGTATCAGTACGTTCTCCAACTTTGGATTTGTaGTGGACTGAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FSQHRSLTVFPRNVSVRSPTLDL*WTEGAC
Trigger: GCAAGCTCCCTCAGTCCATCACAAATCCAAAGTTGG...AGAACGTACTGATACATTTCTGGGAAAGACTGTCAGAGATCTGTGTTGCGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCCAACTTTGGATTTGTaGTGGACTGAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKPTLDL*WTEGAC
Trigger: GCAAGCTCCCTCAGTCCATCACAAATCCAAAGTTGG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGAGCTCTTCGGCTTCTaGAGCACCTGTAATAGGTTA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSELFGF*STCNRL
Trigger: TAACCTATTACAGGTGCTTCAGAAGCCGAAGAGCTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTTGAGAACTGAGCTCTTCGGCTTCTaGAGCACCTGTAATAGGTTA +
Preference number: 4 (lower is better)
Translates to: SAKWLNSCPCCNPGSLRTELFGF*STCNRL
Trigger: TAACCTATTACAGGTGCTTCAGAAGCCGAAGAGCTC...AGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGCCCATGGTCGCGGTTaGAGCTGTACTCTGAGCACT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYAHGRG*SCTLST
Trigger: AGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCCCTTTAGTTCGCTaGTTGTTCTTCCCGCCCATG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFPLVR*LFFPPM
Trigger: CATGGGCGGGAAGAACAAGCAGCGAACTAAAGGGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGGCTTCAGGTTGCTTaGTTGGAGGAAAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKWLQVA*LEEKPL
Trigger: AAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGCTATGGCTTCAGGTTaGTTGCTTGGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKAMASG*LLGGKA
Trigger: GGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCATCAACTGTGGAATaGGCTGGCACAATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSSTVE*AGTMQR
Trigger: TCTCTGCATTGTGCCAGCGCATTCCACAGTTGATGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATGGGCTCACTTTGGATaGTTCCTCTTTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEWAHFG*FLFHQL
Trigger: CAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp CCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAAGGGATCAACGTAATAGCTGCCCATGTTaGAATCCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: PMLQSWVFENCINKRDQRNSCPC*NPGSLR
Trigger: TCTCAAAGACCCAGGATTGCAACATGGGCAGCTATT...ACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGGTCTATGTAACCACTaGATAGGAAGAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSGLCNH*IGRDCL
Trigger: GAGGCAGTCTCTTCCTATGCAGTGGTTACATAGACC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAACTGTGGAATGCGCTaGCACAATGCAGAGACTAAC +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGNCGMR*HNAETN
Trigger: GTTAGTCTCTGCATTGTGCCAGCGCATTCCACAGTT...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTCTTTCATCAACTGTaGAATGCGCTGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLFHQL*NALAQC
Trigger: GCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACTGATGGGCTCACTTTaGATGCTTCCTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQELMGSL*MLPLSS
Trigger: TGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGCTTCCCAGAGAGCTaGGCAGACAATTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSFPES*ADNWVT
Trigger: AGTGACCCAATTGTCTGCCCAGCTCTCTGGGAAGCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCGAAGAAATCCAACTTTaGATTTGTGATGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCEEIQL*ICDGLR
Trigger: CCTCAGTCCATCACAAATCCAAAGTTGGATTTCTTC...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp GCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAGAAGAAATCCAACTTTaGATTTGTGATGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AELTACWVGEISTYLVTEEEIQL*ICDGLR
Trigger: CCTCAGTCCATCACAAATCCAAAGTTGGATTTCTTC...TTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCAGAGTTTCTGCTAAATaGTTAAATAGCTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: SAAELTACWVGEISTYLVRVSAK*LNSCPC
Trigger: ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCT...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTTCCGTGTCTGCTTTaGCTTCCCAGGAACTTAGAG +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFPCLL*LPRNLE
Trigger: CTCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTTTTCCGTGTCTGCTTTaGCTTCCCAGGAACTTAGAG +
Preference number: 4 (lower is better)
Translates to: NRLDTPKTDSTSASGSLIFPCLL*LPRNLE
Trigger: CTCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAA...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCGTCTCACGACACAGTaGACAAGTGGATTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRLTTQ*TSGFVA
Trigger: AGCAACAAATCCACTTGTCCACTGTGTCGTGAGACG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTTCTGCTTGGGGTTTaGGCCAGAAGCCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFLLGV*ARSQDV
Trigger: TACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTGAGTTCTGTGAGACAGTCTAGCAAATTAAGCAAACCCCAGGAGGGGGTCATGAAATCTCCACATATTTaGTCACAGAAGTCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSSVRQSSKLSKPQEGVMKSPHI*SQKSSV
Trigger: CACAGAAGACTTCTGTGACCAAATATGTGGAGATTT...CATGACCCCCTCCTGGGGTTTGCTTAATTTGCTAGACTGTCTCACAGAACTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483326.1
3UTR CAA 72 bp TGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAAGGGATCAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: WLNSCPCCNPGS*RTASIKGINVC
Trigger: GCACACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGCTCGGCCACTGTTTaGAGGCCTCAGGTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSSATV*RPQVPF
Trigger: AAAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGGGTGACATCTTTCTTTaGAAGTTTCCGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGGDIFL*KFPQHH
Trigger: ATGGTGCTGCGGAAACTTTCAAAGAAAGATGTCACC...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGGTGACATCTTTCTTTaGAAGTTTCCGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSGDIFL*KFPQHH
Trigger: ATGGTGCTGCGGAAACTTTCAAAGAAAGATGTCACC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGGATTTGTGATGGACTaGGGGAGCTTGCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKGFVMD*GSLLMN
Trigger: ATTCATCAGCAAGCTCCCTCAGTCCATCACAAATCC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCCAACTTTGGATTTGTaGTGGACTGAGGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTPTLDL*WTEGAC
Trigger: GCAAGCTCCCTCAGTCCATCACAAATCCAAAGTTGG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGGATCAACTGATCATTaGCGAGCATCTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEGSTDH*RASVQS
Trigger: AGATTGAACAGATGCTCGTCAATGATCAGTTGATCC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGAGCTCTTCGGCTTCTaGAGCACCTGTAATAGGTTA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKELFGF*STCNRL
Trigger: TAACCTATTACAGGTGCTTCAGAAGCCGAAGAGCTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCAAGGATATCGCCTTTaGGCCAAGGAGTTACTAAAG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSQGYRL*AKELLK
Trigger: CTTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGACAATCTGCCAAGTTaGCCAATTTCTCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSDNLPS*PISHQG
Trigger: TCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGGACTTGGAGACTGTTaGTATCCAAAGATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSGLGDC*YPKMKP
Trigger: AGGCTTCATCTTTGGATATCAACAGTCTCCAAGTCC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCCAATGCCTTTGTTTaGTGTACTTCAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSNAFV*CTSGIP
Trigger: AGGGATCCCTGAAGTACATCAAACAAAGGCATTGGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCATGTGCAACAGAGATaGTTAGCTGGTCTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSHVQQR*LAGLSS
Trigger: ACTTGAGAGACCAGCTAATCATCTCTGTTGCACATG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGGCTTCAGGTTGCTTaGTTGGAGGAAAAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTWLQVA*LEEKPL
Trigger: AAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGCTATGGCTTCAGGTTaGTTGCTTGGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTAMASG*LLGGKA
Trigger: GGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCFILTK*YGFRLL
Trigger: AAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp TCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTTGAGAACTTGGGCTCACTTTGGATaGTTCCTCTTTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: SAKWLNSCPCCNPGSLRTWAHFG*FLFHQL
Trigger: CAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCA...AGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAATAGCTGCCCATGTTaGAATCCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSNSCPC*NPGSLR
Trigger: TCTCAAAGACCCAGGATTGCAACATGGGCAGCTATT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGGTCTATGTAACCACTaGATAGGAAGAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKGLCNH*IGRDCL
Trigger: GAGGCAGTCTCTTCCTATGCAGTGGTTACATAGACC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATTTGGGACCTCAACTaGTGTCTCTGCATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKIWDLN*CLCIGW
Trigger: CCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTGTTCCCTGTTCTTTaGCAAGGAGTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLFPVL*QGVLQL
Trigger: GAGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCAATTCTTGGCCAATATaGAAGAACTCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCNSWPI*KNSFHS
Trigger: ACTGTGAAAGGAGTTCTTCCATATTGGCCAAGAATT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGCTGCAAACGCAGCTaGTGTGTAAGTATCACACTG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKCCKRS*CVSITL
Trigger: CAGTGTGATACTTACACACCAGCTGCGTTTGCAGCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTCAGGTTGCTTGCTTaGAGGAAAAGCCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFRLLA*RKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTTTCAGGTTGCTTGCTTaGAGGAAAAGCCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NRLDTPKTDSTSASGSLIFRLLA*RKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAA...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACCTTACAAAATGCTATaGCTTCAGGTTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEPYKML*LQVACL
Trigger: CAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAAGGGATCAACGTCCTTACAAAATGCTATaGCTTCAGGTTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: PMLQSWVFENCINKRDQRPYKML*LQVACL
Trigger: CAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGG...ACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTCTCTTTCTTCCTCTaGAACAGTTTGCGGGTCACT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFSFFL*NSLRVT
Trigger: AGTGACCCGCAAACTGTTCCAGAGGAAGAAAGAGAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp GAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTTCTCTTTCTTCCTCTaGAACAGTTTGCGGGTCACT +
Preference number: 4 (lower is better)
Translates to: ELRVSAKWLNSCPCCNPGFSFFL*NSLRVT
Trigger: AGTGACCCGCAAACTGTTCCAGAGGAAGAAAGAGAA...CCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTCTCTTTCTTCCTCTaGAACAGTTTGCGGGTCACT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFSFFL*NSLRVT
Trigger: AGTGACCCGCAAACTGTTCCAGAGGAAGAAAGAGAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAACTGTGGAATGCGCTaGCACAATGCAGAGACTAAC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKNCGMR*HNAETN
Trigger: GTTAGTCTCTGCATTGTGCCAGCGCATTCCACAGTT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTCTGATGGGCTCACTTTaGATGCTTCCTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: NRLDTPKTDSTSASGSLILMGSL*MLPLSS
Trigger: TGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAG...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTGATGGGCTCACTTTaGATGCTTCCTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLMGSL*MLPLSS
Trigger: TGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTCAAGAGGTTTGGCTTaGACAATACTCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCSRGLA*TILCFS
Trigger: TGAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGGAGGCAAACAAAACTaGGCAGGACACTGCATCTAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKGGKQN*AGHCIY
Trigger: ATAGATGCAGTGTCCTGCCCAGTTTTGTTTGCCTCC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTTCTGCTTGGGGTTTaGGCCAGAAGCCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFLLGV*ARSQDV
Trigger: TACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATTTTCTTTTCTGCTTaGGGTTTGGGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSIFFSA*GLGQKP
Trigger: TGGCTTCTGGCCCAAACCCCAAGCAGAAAAGAAAAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGGTGACATCTTTCTTTaGAAGTTTCCGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKGDIFL*KFPQHH
Trigger: ATGGTGCTGCGGAAACTTTCAAAGAAAGATGTCACC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGGATTTGTGATGGACTaGGGGAGCTTGCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTGFVMD*GSLLMN
Trigger: ATTCATCAGCAAGCTCCCTCAGTCCATCACAAATCC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGACAATCTGCCAAGTTaGCCAATTTCTCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKDNLPS*PISHQG
Trigger: TCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCCAAAGATGAAGCCTaGACTTGGTTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSKDEA*TWFFSH
Trigger: GTGGCTGAAGAACCAAGTTCAGGCTTCATCTTTGGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTCACACCACTGCAGTaGATAAAGCAGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFTPLQ*IKQFCN
Trigger: ATTGCAGAACTGCTTTATTCACTGCAGTGGTGTGAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCAGTTCCGCCACTGCTaGACAGCTACTCCTACTCTT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYQFRHC*TATPTL
Trigger: AAGAGTAGGAGTAGCTGTTCAGCAGTGGCGGAACTG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACAGTTCCGCCACTGCTaGACAGCTACTCCTACTCTT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLQFRHC*TATPTL
Trigger: AAGAGTAGGAGTAGCTGTTCAGCAGTGGCGGAACTG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCCATTCTGATGGGTaGGGTAAGTGCTTAACTGCA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFHSDG*GKCLTA
Trigger: TGCAGTTAAGCACTTACCTCACCCATCAGAATGGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTCATTTCTGAAGGCTaGAAAACATTTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFISEG*KTFAPP
Trigger: TGGGGGAGCAAATGTTTTTCAGCCTTCAGAAATGAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTGTACTTCACTTACTaGCCCTCAGAGGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLYFTY*PSEAQG
Trigger: GCCTTGAGCCTCTGAGGGTCAGTAAGTGAAGTACAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCTGTACTTCACTTACTaGCCCTCAGAGGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYLYFTY*PSEAQG
Trigger: GCCTTGAGCCTCTGAGGGTCAGTAAGTGAAGTACAG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAAATGCATCTTTTGCTaGAAACGCAGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSKCIFC*KRSWCV
Trigger: TACACACCAGCTGCGTTTGCAGCAAAAGATGCATTT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFKCIF*CKRSWC
Trigger: ACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFKCIF*CKRSWC
Trigger: ACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp GAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: ELRVSAKWLNSCPCCNPGFKCIF*CKRSWC
Trigger: ACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAA...CCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCATCAACTGTGGAATaGGCTGGCACAATGCAGAGA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSSTVE*AGTMQR
Trigger: TCTCTGCATTGTGCCAGCGCATTCCACAGTTGATGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTCCTCACCTAAGTTTTaGTGCATTATAAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCSSPKF*CIIKRK
Trigger: CTTACGTTTTATAATGCAGCAAAACTTAGGTGAGGA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAATAGCTGCCCATGTTaGAATCCTGGGTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKNSCPC*NPGSLR
Trigger: TCTCAAAGACCCAGGATTGCAACATGGGCAGCTATT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAAATGGTTAAATAGCTaGCCATGTTGCAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSKWLNS*PCCNPG
Trigger: CCCAGGATTGCAACATGGGCAGCTATTTAACCATTT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATCTTTTTCCGTGTCTaGTTTGGCTTCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKIFFRV*FGFPGT
Trigger: AGTTCCTGGGAAGCCAAAGCAGACACGGAAAAAGAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTGCATAGGAAGAGACTaGCTCATCTTTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSCIGRD*LIFSHS
Trigger: TGAATGGGAAAAGATGAGGCAGTCTCTTCCTATGCA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTCAACTGCTGTCTCTaGATAGGTTGGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLNCCL*IGWIFW
Trigger: CCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGCTGCAAACGCAGCTaGTGTGTAAGTATCACACTG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCCKRS*CVSITL
Trigger: CAGTGTGATACTTACACACCAGCTGCGTTTGCAGCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCAGGTTGCTTGCTTaGAGGAAAAGCCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFRLLA*RKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCCTTACAAAATGCTATaGCTTCAGGTTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSPYKML*LQVACL
Trigger: CAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGCTGGGCAGACAATTaGGTCACTGTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSWADN*VTVINA
Trigger: AGCATTGATGACAGTGACCCAATTGTCTGCCCAGCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAGCTTCCCAGAGAGCTaGGCAGACAATTGGGTCACT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSFPES*ADNWVT
Trigger: AGTGACCCAATTGTCTGCCCAGCTCTCTGGGAAGCT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCCCATGTTGCAATCCTaGGTCTTTGAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTPMLQS*VFENCI
Trigger: GATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGCAGACAAGAGGACTTaGAGACTGTTGATATCCAAA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSADKRT*RLLISK
Trigger: TTTGGATATCAACAGTCTCCAAGTCCTCTTGTCTGC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATAGGTTGGATTTTCTaGCATAAGCCTGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSIGWIF*HKPEQV
Trigger: CACCTGTTCAGGCTTATGCCAGAAAATCCAACCTAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTGTCTCTGCATAGGTTaGATTTTCTGGCATAAGCCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSCLCIG*IFWHKP
Trigger: AGGCTTATGCCAGAAAATCCAACCTATGCAGAGACA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGCCAAGTGTGGAATGTaGTATGGAAGCATTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSAKCGM*YGSIVV
Trigger: AACAACAATGCTTCCATACCACATTCCACACTTGGC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTTCTGCTTGGGGTTTaGGCCAGAAGCCAAGATGTA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFLLGV*ARSQDV
Trigger: TACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATTTTCTTTTCTGCTTaGGGTTTGGGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKIFFSA*GLGQKP
Trigger: TGGCTTCTGGCCCAAACCCCAAGCAGAAAAGAAAAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGTTTCTTTTATAAGATaGTCCTGCAGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEVSFIR*SCSTLV
Trigger: TACAAGTGTGCTGCAGGATCATCTTATAAAAGAAAC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGGATCAACTGATCATTaGCGAGCATCTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKGSTDH*RASVQS
Trigger: AGATTGAACAGATGCTCGTCAATGATCAGTTGATCC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCCAAAATCCTTCCTTTaGTCTTCATTTAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSPKSFL*SSFSQP
Trigger: AGGTTGGCTAAATGAAGATCAAAGGAAGGATTTTGG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCCAAAATCCTTCCTTTaGTCTTCATTTAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGPKSFL*SSFSQP
Trigger: AGGTTGGCTAAATGAAGATCAAAGGAAGGATTTTGG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCAAGGATATCGCCTTTaGGCCAAGGAGTTACTAAAG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTQGYRL*AKELLK
Trigger: CTTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATCCTTTCGCTGAGCTaGAATAGTTATAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKILSLS*NSYRPH
Trigger: ATGTGGCCTATAACTATTTCAGCTCAGCGAAAGGAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGGCCAAATCACAGCTaGCACAGGCAAACAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYRPNHS*HRQTVA
Trigger: TGCAACTGTTTGCCTGTGTCAGCTGTGATTTGGCCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTTGCAGGAAGTTTGTaGCTCAATAGCTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLAGSL*LNSCSF
Trigger: AAAGGAACAGCTATTGAGTCACAAACTTCCTGCAAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCTAGTAAGTCCTCTTaGATGCTAAGAAGAGACATC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSSKSS*MLRRDI
Trigger: GATGTCTCTTCTTAGCATTCAAGAGGACTTACTAGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTGTCATATGATAGACTaGACAAGCCAAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSCHMID*TSQVWN
Trigger: ATTCCACACTTGGCTTGTTCAGTCTATCATATGACA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGAAACCGTGAATGACTaGGAAACAGATCATGCAATC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKETVND*ETDHAI
Trigger: GATTGCATGATCTGTTTCTCAGTCATTCACGGTTTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCATGTGCAACAGAGATaGTTAGCTGGTCTCTCAAGT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTHVQQR*LAGLSS
Trigger: ACTTGAGAGACCAGCTAATCATCTCTGTTGCACATG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGTTTCACCAAGAATCTaGTGCCCTAATACTAATGTG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSVSPRI*CPNTNV
Trigger: CACATTAGTATTAGGGCATCAGATTCTTGGTGAAAC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATTTTGCTTTAAGGGCTaGGAAGTAAGGAATTTGCAA +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEFCFKG*EVRNLQ
Trigger: TTGCAAATTCCTTACTTCTCAGCCCTTAAAGCAAAA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp CCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAAGGGATCAACGTTTGATTACTGATCATTaGCGAGCATCTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: PMLQSWVFENCINKRDQRLITDH*RASVQS
Trigger: AGATTGAACAGATGCTCGTCAATGATCAGTAATCAA...ACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFKCIF*CKRSWC
Trigger: ACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGGGCTCACTTTGGATaGTTCCTCTTTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTWAHFG*FLFHQL
Trigger: CAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp CCCATGTTGCAATCCTGGGTCTTTGAGAACTGCATCAATAAAAGGGATCAACGTTGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: PMLQSWVFENCINKRDQRWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...ACGTTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTGTTAAATAACAGCTaGAAAAGGCCCGACGTATTA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLLNNS*KRPDVL
Trigger: TAATACGTCGGGCCTTTTGCAGCTGTTATTTAACAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTCAACTGCTGTCTCTaGATAGGTTGGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLNCCL*IGWIFW
Trigger: CCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTGTTCCCTGTTCTTTaGCAAGGAGTTCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLFPVL*QGVLQL
Trigger: GAGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTCAGGTTGCTTGCTTaGAGGAAAAGCCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFRLLA*RKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTGATGGGCTCACTTTaGATGCTTCCTCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLMGSL*MLPLSS
Trigger: TGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGGAGCTTGCTGATGAATaGCAGAAGGTAAGGATATAT +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGELADE*QKVRIY
Trigger: ATATATCCTTACCTTCTGCCATTCATCAGCAAGCTC...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGAAGAAATCCAACTTTaGATTTGTGATGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSEEIQL*ICDGLR
Trigger: CCTCAGTCCATCACAAATCCAAAGTTGGATTTCTTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAAGAGTTTCTGCTAAATaGTTAAATAGCTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQERVSAK*LNSCPC
Trigger: ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCAACCTATCAGTTTCTaGTATAAAAACTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSQPISF*YKNCTA
Trigger: TGCGGTGCAGTTTTTATACCAGAAACTGATAGGTTG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCAACCTATCAGTTTCTaGTATAAAAACTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGQPISF*YKNCTA
Trigger: TGCGGTGCAGTTTTTATACCAGAAACTGATAGGTTG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAATTTCAAGTCCACCTTaGTTAGATCATCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: TRARYLTATYFHEVGKQEISSPP*LDHPRL
Trigger: AAGTCTTGGATGATCTAACCAAGGTGGACTTGAAAT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATTCTGAAGATACCCTaGATTCCAAGTCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSILKIP*IPSPHY
Trigger: GTAATGAGGACTTGGAATCCAGGGTATCTTCAGAAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGCTGAAGTACACAAATaGCTGGGAAGTGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKAEVHK*LGSVFM
Trigger: CATAAAGACACTTCCCAGCCATTTGTGTACTTCAGC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTTAGGGTCCTTATTTaGGACCTCAACTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFRVLI*DLNCCL
Trigger: GAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCTCTAATACTCAGCTaGAGCTCCTCAGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSLILS*SSSVKN
Trigger: ATTCTTTACTGAGGAGCTCCAGCTGAGTATTAGAGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGTGTGGAATGTGGTATaGAAGCATTGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSVWNVV*KHCCFS
Trigger: AGAGAAACAACAATGCTTCCATACCACATTCCACAC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGCCAAGTGTGGAATGTaGTATGGAAGCATTGTTGTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKAKCGM*YGSIVV
Trigger: AACAACAATGCTTCCATACCACATTCCACACTTGGC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTGTTTCTTTTATAAGATaGTCCTGCAGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: NRLDTPKTDSTSASGSLIVSFIR*SCSTLV
Trigger: TACAAGTGTGCTGCAGGATCATCTTATAAAAGAAAC...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCAGTTTGCGGGTCACTaGGTGTATCAGGTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYQFAGH*VYQVFL
Trigger: AAGAAACACCTGATACACTCAGTGACCCGCAAACTG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGATTTGTGATGGACTaGGGGAGCTTGCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGFVMD*GSLLMN
Trigger: ATTCATCAGCAAGCTCCCTCAGTCCATCACAAATCC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTGAAGAATTATGAGTaGGAGAAGGTTCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLKNYE*EKVQLL
Trigger: TAACAACTGAACCTTCTCTCACTCATAATTCTTCAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCTGAAGAATTATGAGTaGGAGAAGGTTCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGLKNYE*EKVQLL
Trigger: TAACAACTGAACCTTCTCTCACTCATAATTCTTCAG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCCAAAATCCTTCCTTTaGTCTTCATTTAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKPKSFL*SSFSQP
Trigger: AGGTTGGCTAAATGAAGATCAAAGGAAGGATTTTGG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATCCTTTCGCTGAGCTaGAATAGTTATAGGCCACAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTILSLS*NSYRPH
Trigger: ATGTGGCCTATAACTATTTCAGCTCAGCGAAAGGAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGGTACTCTCTTTATATaGACTGTCAGTTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSGTLFI*TVSLMN
Trigger: GTTCATCAAACTGACAGTTCATATAAAGAGAGTACC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCCAAAGATGAAGCCTaGACTTGGTTCTTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSKDEA*TWFFSH
Trigger: GTGGCTGAAGAACCAAGTTCAGGCTTCATCTTTGGA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTCACACCACTGCAGTaGATAAAGCAGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFTPLQ*IKQFCN
Trigger: ATTGCAGAACTGCTTTATTCACTGCAGTGGTGTGAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTTGCAGGAAGTTTGTaGCTCAATAGCTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLAGSL*LNSCSF
Trigger: AAAGGAACAGCTATTGAGTCACAAACTTCCTGCAAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTCTAGTAAGTCCTCTTaGATGCTAAGAAGAGACATC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKSSKSS*MLRRDI
Trigger: GATGTCTCTTCTTAGCATTCAAGAGGACTTACTAGA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATCTATCCACAATATTaGAAACACGCTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKIYPQY*KHASHC
Trigger: GCAGTGAGAAGCGTGTTTTCAATATTGTGGATAGAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGAAACCGTGAATGACTaGGAAACAGATCATGCAATC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTETVND*ETDHAI
Trigger: GATTGCATGATCTGTTTCTCAGTCATTCACGGTTTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LASQELRVSAKWLNSCPCFILTK*YGFRLL
Trigger: AAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAA...ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp ACCTGTAATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCATCCTCACCTAAGTTTTaGTGCATTATAAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: TCNRLDTPKTDSTSASGSSSPKF*CIIKRK
Trigger: CTTACGTTTTATAATGCAGCAAAACTTAGGTGAGGA...TGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATTACAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGAAACCTTAGATGTTaGTCTGACTTTCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRNLRC*SDFRSL
Trigger: CAATGAACGAAAGTCAGAGCAACATCTAAGGTTTCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAGAAACCTTAGATGTTaGTCTGACTTTCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: YRVTRARYLTATYFHEVGRNLRC*SDFRSL
Trigger: CAATGAACGAAAGTCAGAGCAACATCTAAGGTTTCT...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGGTCTATGTAACCACTaGATAGGAAGAGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYGLCNH*IGRDCL
Trigger: GAGGCAGTCTCTTCCTATGCAGTGGTTACATAGACC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTGTTAAATAACAGCTaGAAAAGGCCCGACGTATTA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLLNNS*KRPDVL
Trigger: TAATACGTCGGGCCTTTTGCAGCTGTTATTTAACAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGACACAGGCAAACAGTTaGACAAGTGGAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKTQANS*TSGIEY
Trigger: GTATTCTATTCCACTTGTGCAACTGTTTGCCTGTGT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATTTGGGACCTCAACTaGTGTCTCTGCATAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLIWDLN*CLCIGW
Trigger: CCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTAATTCTTGGCCAATATaGAAGAACTCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: LASQELRVSAKWLNSCPCNSWPI*KNSFHS
Trigger: ACTGTGAAAGGAGTTCTTCCATATTGGCCAAGAATT...ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAACTGTGGAATGCGCTaGCACAATGCAGAGACTAAC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLNCGMR*HNAETN
Trigger: GTTAGTCTCTGCATTGTGCCAGCGCATTCCACAGTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCTCTTTCATCAACTGTaGAATGCGCTGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYLFHQL*NALAQC
Trigger: GCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTCTTTCATCAACTGTaGAATGCGCTGGCACAATGC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLFHQL*NALAQC
Trigger: GCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAGCTGGGCAGACAATTaGGTCACTGTCATCAATGCT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSWADN*VTVINA
Trigger: AGCATTGATGACAGTGACCCAATTGTCTGCCCAGCT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGAGCTTGCTGATGAATaGCAGAAGGTAAGGATATAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKELADE*QKVRIY
Trigger: ATATATCCTTACCTTCTGCCATTCATCAGCAAGCTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACCCATGTTGCAATCCTaGGTCTTTGAGAACTGCATC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLPMLQS*VFENCI
Trigger: GATGCAGTTCTCAAAGACCCAGGATTGCAACATGGG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGAGTTTCTGCTAAATaGTTAAATAGCTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRVSAK*LNSCPC
Trigger: ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCCGTGTCTGCTTTaGCTTCCCAGGAACTTAGAG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFPCLL*LPRNLE
Trigger: CTCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTTCCGTGTCTGCTTTaGCTTCCCAGGAACTTAGAG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFPCLL*LPRNLE
Trigger: CTCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGACATAGACTTTGAATaGTATGCAAATTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSDIDFE*YANCLQ
Trigger: CTGAAGGCAATTTGCATACCATTCAAAGTCTATGTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGTCTCTGCATAGGTTaGATTTTCTGGCATAAGCCT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCLCIG*IFWHKP
Trigger: AGGCTTATGCCAGAAAATCCAACCTATGCAGAGACA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACGTCTCACGACACAGTaGACAAGTGGATTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLRLTTQ*TSGFVA
Trigger: AGCAACAAATCCACTTGTCCACTGTGTCGTGAGACG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGAGGCAAACAAAACTaGGCAGGACACTGCATCTAT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGGKQN*AGHCIY
Trigger: ATAGATGCAGTGTCCTGCCCAGTTTTGTTTGCCTCC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAACGCTGTACAGATGTaGTATTCTGAATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSNAVQM*YSEFQS
Trigger: AGACTGAAATTCAGAATACCACATCTGTACAGCGTT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGTGACATCTTTCTTTaGAAGTTTCCGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGDIFL*KFPQHH
Trigger: ATGGTGCTGCGGAAACTTTCAAAGAAAGATGTCACC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCCAAAATCCTTCCTTTaGTCTTCATTTAGCCAACCT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTPKSFL*SSFSQP
Trigger: AGGTTGGCTAAATGAAGATCAAAGGAAGGATTTTGG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACAAGGATATCGCCTTTaGGCCAAGGAGTTACTAAAG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLQGYRL*AKELLK
Trigger: CTTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGACAATCTGCCAAGTTaGCCAATTTCTCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYDNLPS*PISHQG
Trigger: TCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACAAGCATCCTTTCGCTaGGCTGAAATAGTTATAGGC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLQASFR*AEIVIG
Trigger: GCCTATAACTATTTCAGCTCAGCGAAAGGATGCTTG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCAAGCATCCTTTCGCTaGGCTGAAATAGTTATAGGC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYQASFR*AEIVIG
Trigger: GCCTATAACTATTTCAGCTCAGCGAAAGGATGCTTG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGGACTTGGAGACTGTTaGTATCCAAAGATGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYGLGDC*YPKMKP
Trigger: AGGCTTCATCTTTGGATATCAACAGTCTCCAAGTCC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTTTACTTCATCAGATaGAATGCTTCGGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFYFIR*NASGKD
Trigger: ATCCTTTCCCGAAGCATTTCATCTGATGAAGTAAAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAATGGACATAGACTTTaGATGGTATGCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKNGHRL*MVCKLP
Trigger: AGGCAATTTGCATACCATTCAAAGTCTATGTCCATT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATAGAATACAATGCCTaGTTCTCACTTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTIEYNA*FSLVVS
Trigger: GGAGACAACAAGTGAGAATCAGGCATTGTATTCTAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGTCATATGATAGACTaGACAAGCCAAGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCHMID*TSQVWN
Trigger: ATTCCACACTTGGCTTGTTCAGTCTATCATATGACA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATCTATCCACAATATTaGAAACACGCTTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTIYPQY*KHASHC
Trigger: GCAGTGAGAAGCGTGTTTTCAATATTGTGGATAGAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGACCCAGTGGATAATTTaGAGGCAGTTGTATTATAAG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKTQWII*RQLYYK
Trigger: CTTATAATACAACTGCCTTCAAATTATCCACTGGGT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCCATTCTGATGGGTaGGGTAAGTGCTTAACTGCA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFHSDG*GKCLTA
Trigger: TGCAGTTAAGCACTTACCTCACCCATCAGAATGGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFILTK*YGFRLL
Trigger: AAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGGGCTCACTTTGGATaGTTCCTCTTTCATCAACTG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLWAHFG*FLFHQL
Trigger: CAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCCTCACCTAAGTTTTaGTGCATTATAAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSSPKF*CIIKRK
Trigger: CTTACGTTTTATAATGCAGCAAAACTTAGGTGAGGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATCTTTTTCCGTGTCTaGTTTGGCTTCCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLIFFRV*FGFPGT
Trigger: AGTTCCTGGGAAGCCAAAGCAGACACGGAAAAAGAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCATGGGTTTCAGCATTaGATTCTGAAAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTHGFQH*ILKGCF
Trigger: GAAACATCCTTTCAGAATGCAATGCTGAAACCCATG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCTCAACTGCTGTCTCTaGATAGGTTGGATTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYLNCCL*IGWIFW
Trigger: CCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAATTCTTGGCCAATATaGAAGAACTCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKNSWPI*KNSFHS
Trigger: ACTGTGAAAGGAGTTCTTCCATATTGGCCAAGAATT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCAGGTTGCTTGCTTaGAGGAAAAGCCGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFRLLA*RKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCTCTTTCTTCCTCTaGAACAGTTTGCGGGTCACT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFSFFL*NSLRVT
Trigger: AGTGACCCGCAAACTGTTCCAGAGGAAGAAAGAGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCTCTTTCTTCCTCTaGAACAGTTTGCGGGTCACT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFSFFL*NSLRVT
Trigger: AGTGACCCGCAAACTGTTCCAGAGGAAGAAAGAGAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCAACCTATCAGTTTCTaGTATAAAAACTGCACCGCA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTQPISF*YKNCTA
Trigger: TGCGGTGCAGTTTTTATACCAGAAACTGATAGGTTG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATTTCAAGTCCACCTTaGTTAGATCATCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKISSPP*LDHPRL
Trigger: AAGTCTTGGATGATCTAACCAAGGTGGACTTGAAAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTTAGGGTCCTTATTTaGGACCTCAACTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFRVLI*DLNCCL
Trigger: GAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCTCTAATACTCAGCTaGAGCTCCTCAGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSLILS*SSSVKN
Trigger: ATTCTTTACTGAGGAGCTCCAGCTGAGTATTAGAGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGTGTGGAATGTGGTATaGAAGCATTGTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTVWNVV*KHCCFS
Trigger: AGAGAAACAACAATGCTTCCATACCACATTCCACAC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTCGTTTTGCTTCACTTaGACTATTCTAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSSFCFT*TILKHR
Trigger: TCTGTGTTTTAGAATAGTCCAAGTGAAGCAAAACGA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGATCAACTGATCATTaGCGAGCATCTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGSTDH*RASVQS
Trigger: AGATTGAACAGATGCTCGTCAATGATCAGTTGATCC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCACACCACTGCAGTaGATAAAGCAGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFTPLQ*IKQFCN
Trigger: ATTGCAGAACTGCTTTATTCACTGCAGTGGTGTGAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTTTACTTCATCAGATaGAATGCTTCGGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFYFIR*NASGKD
Trigger: ATCCTTTCCCGAAGCATTTCATCTGATGAAGTAAAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGAAACCGTGAATGACTaGGAAACAGATCATGCAATC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLETVND*ETDHAI
Trigger: GATTGCATGATCTGTTTCTCAGTCATTCACGGTTTC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCATTTCTGAAGGCTaGAAAACATTTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFISEG*KTFAPP
Trigger: TGGGGGAGCAAATGTTTTTCAGCCTTCAGAAATGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAAATGCATCTTTTGCTaGAAACGCAGCTGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLKCIFC*KRSWCV
Trigger: TACACACCAGCTGCGTTTGCAGCAAAAGATGCATTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFKCIF*CKRSWC
Trigger: ACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTCCTCACCTAAGTTTTaGTGCATTATAAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKSSPKF*CIIKRK
Trigger: CTTACGTTTTATAATGCAGCAAAACTTAGGTGAGGA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAAATGGTTAAATAGCTaGCCATGTTGCAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYKWLNS*PCCNPG
Trigger: CCCAGGATTGCAACATGGGCAGCTATTTAACCATTT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGCATAGGAAGAGACTaGCTCATCTTTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLCIGRD*LIFSHS
Trigger: TGAATGGGAAAAGATGAGGCAGTCTCTTCCTATGCA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTGCATAGGAAGAGACTaGCTCATCTTTTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYCIGRD*LIFSHS
Trigger: TGAATGGGAAAAGATGAGGCAGTCTCTTCCTATGCA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGGAATAGAATACAATaGCTGATTCTCACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKWNRIQ*LILTCC
Trigger: ACAACAAGTGAGAATCAGGCATTGTATTCTATTCCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAACTGGGCAGGACACTaGATCTATAAATATAATTCG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTNWAGH*IYKYNS
Trigger: CGAATTATATTTATAGATGCAGTGTCCTGCCCAGTT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAATTCTTGGCCAATATaGAAGAACTCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTNSWPI*KNSFHS
Trigger: ACTGTGAAAGGAGTTCTTCCATATTGGCCAAGAATT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACCTTACAAAATGCTATaGCTTCAGGTTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLPYKML*LQVACL
Trigger: CAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCTTACAAAATGCTATaGCTTCAGGTTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYPYKML*LQVACL
Trigger: CAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGAGTTTCTGCTAAATaGTTAAATAGCTGCCCATGT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTRVSAK*LNSCPC
Trigger: ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTCAAGAGGTTTGGCTTaGACAATACTCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSRGLA*TILCFS
Trigger: TGAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATTTCAAGTCCACCTTaGTTAGATCATCCAAGACTT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTISSPP*LDHPRL
Trigger: AAGTCTTGGATGATCTAACCAAGGTGGACTTGAAAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGCAGACAAGAGGACTTaGAGACTGTTGATATCCAAA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLADKRT*RLLISK
Trigger: TTTGGATATCAACAGTCTCCAAGTCCTCTTGTCTGC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGCTGAAGTACACAAATaGCTGGGAAGTGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLAEVHK*LGSVFM
Trigger: CATAAAGACACTTCCCAGCCATTTGTGTACTTCAGC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGCTGAAGTACACAAATaGCTGGGAAGTGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYAEVHK*LGSVFM
Trigger: CATAAAGACACTTCCCAGCCATTTGTGTACTTCAGC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGAAGTCTTCACTCAGTaGTTTAATAGTAACTATCTG +
Preference number: 4 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKEVFTQ*FNSNYL
Trigger: CAGATAGTTACTATTAAACCACTGAGTGAAGACTTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATAGGTTGGATTTTCTaGCATAAGCCTGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLIGWIF*HKPEQV
Trigger: CACCTGTTCAGGCTTATGCCAGAAAATCCAACCTAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGTCTCTGCATAGGTTaGATTTTCTGGCATAAGCCT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLCLCIG*IFWHKP
Trigger: AGGCTTATGCCAGAAAATCCAACCTATGCAGAGACA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAACGCTGTACAGATGTaGTATTCTGAATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTNAVQM*YSEFQS
Trigger: AGACTGAAATTCAGAATACCACATCTGTACAGCGTT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATAGAATACAATGCCTaGTTCTCACTTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLIEYNA*FSLVVS
Trigger: GGAGACAACAAGTGAGAATCAGGCATTGTATTCTAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATATAGAATACAATGCCTaGTTCTCACTTGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYIEYNA*FSLVVS
Trigger: GGAGACAACAAGTGAGAATCAGGCATTGTATTCTAT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCAGCATTGCATTCTaGAAGGATGTTTCAGACACA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFSIAF*KDVSDT
Trigger: TGTGTCTGAAACATCCTTTCAGAATGCAATGCTGAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGTTTCACCAAGAATCTaGTGCCCTAATACTAATGTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYVSPRI*CPNTNV
Trigger: CACATTAGTATTAGGGCATCAGATTCTTGGTGAAAC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGAATGGTATGCAAATTaGCTTCAGTTAGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTEWYAN*LQLVEK
Trigger: TTTTTCCACTAACTGAAGGCAATTTGCATACCATTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAACACAGGCAAACAGTTaGACAAGTGGAATAGAATAC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLTQANS*TSGIEY
Trigger: GTATTCTATTCCACTTGTGCAACTGTTTGCCTGTGT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACATGGGTTTCAGCATTaGATTCTGAAAGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLHGFQH*ILKGCF
Trigger: GAAACATCCTTTCAGAATGCAATGCTGAAACCCATG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAGGCTGAAAAACATTTaGTCCCCCAAGTCTCTTATT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLRLKNI*SPKSLI
Trigger: AATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGAGCTTGCTGATGAATaGCAGAAGGTAAGGATATAT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYELADE*QKVRIY
Trigger: ATATATCCTTACCTTCTGCCATTCATCAGCAAGCTC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGAAGAAATCCAACTTTaGATTTGTGATGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYEEIQL*ICDGLR
Trigger: CCTCAGTCCATCACAAATCCAAAGTTGGATTTCTTC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATATTCTGAAGATACCCTaGATTCCAAGTCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYILKIP*IPSPHY
Trigger: GTAATGAGGACTTGGAATCCAGGGTATCTTCAGAAT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATTCTGAAGATACCCTaGATTCCAAGTCCTCATTAC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLILKIP*IPSPHY
Trigger: GTAATGAGGACTTGGAATCCAGGGTATCTTCAGAAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGAAGTCTTCACTCAGTaGTTTAATAGTAACTATCTG +
Preference number: 4 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTEVFTQ*FNSNYL
Trigger: CAGATAGTTACTATTAAACCACTGAGTGAAGACTTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCTCTAATACTCAGCTaGAGCTCCTCAGTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSLILS*SSSVKN
Trigger: ATTCTTTACTGAGGAGCTCCAGCTGAGTATTAGAGA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGTTTCTTTTATAAGATaGTCCTGCAGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYVSFIR*SCSTLV
Trigger: TACAAGTGTGCTGCAGGATCATCTTATAAAAGAAAC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGTTTCTTTTATAAGATaGTCCTGCAGCACACTTGTA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLVSFIR*SCSTLV
Trigger: TACAAGTGTGCTGCAGGATCATCTTATAAAAGAAAC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTGAAGAATTATGAGTaGGAGAAGGTTCAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLKNYE*EKVQLL
Trigger: TAACAACTGAACCTTCTCTCACTCATAATTCTTCAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGTACTCTCTTTATATaGACTGTCAGTTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGTLFI*TVSLMN
Trigger: GTTCATCAAACTGACAGTTCATATAAAGAGAGTACC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTTACTTCATCAGATaGAATGCTTCGGGAAAGGAT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFYFIR*NASGKD
Trigger: ATCCTTTCCCGAAGCATTTCATCTGATGAAGTAAAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR TCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAATGGACATAGACTTTaGATGGTATGCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLNGHRL*MVCKLP
Trigger: AGGCAATTTGCATACCATTCAAAGTCTATGTCCATT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFILTK*YGFRLL
Trigger: AAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFILTK*YGFRLL
Trigger: AAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGGGTCTTTGAGAACTaGATCAATAAAAGGGATCAA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLWVFEN*INKRDQ
Trigger: TTGATCCCTTTTATTGATGCAGTTCTCAAAGACCCA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGAAACCTTAGATGTTaGTCTGACTTTCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYRNLRC*SDFRSL
Trigger: CAATGAACGAAAGTCAGAGCAACATCTAAGGTTTCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCTCTCAGTTCGTTTTaGTTCACTTGGACTATTCTA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSLSSF*FTWTIL
Trigger: TAGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAACTGGGCAGGACACTaGATCTATAAATATAATTCG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLNWAGH*IYKYNS
Trigger: CGAATTATATTTATAGATGCAGTGTCCTGCCCAGTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAATTCTTGGCCAATATaGAAGAACTCCTTTCACAGT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLNSWPI*KNSFHS
Trigger: ACTGTGAAAGGAGTTCTTCCATATTGGCCAAGAATT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCAAGAGGTTTGGCTTaGACAATACTCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSRGLA*TILCFS
Trigger: TGAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCAAGAGGTTTGGCTTaGACAATACTCTGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSRGLA*TILCFS
Trigger: TGAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGACATAGACTTTGAATaGTATGCAAATTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLDIDFE*YANCLQ
Trigger: CTGAAGGCAATTTGCATACCATTCAAAGTCTATGTC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAAACAGTTGCACAAGTaGAATAGAATACAATGCCTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYKQLHK*NRIQCL
Trigger: CAGGCATTGTATTCTATTCCACTTGTGCAACTGTTT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAAACAGTTGCACAAGTaGAATAGAATACAATGCCTG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLKQLHK*NRIQCL
Trigger: CAGGCATTGTATTCTATTCCACTTGTGCAACTGTTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATAACCCTTGATAAATaGAGGCACCTTAAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLITLDK*RHLKVQ
Trigger: CTGAACTTTAAGGTGCCTCCATTTATCAAGGGTTAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAACGCTGTACAGATGTaGTATTCTGAATTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYNAVQM*YSEFQS
Trigger: AGACTGAAATTCAGAATACCACATCTGTACAGCGTT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
3UTR CAA 72 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTaGCTTCACTTGGACTATTCTAAAACACAGATCAAC +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFV*LHLDYSKTQIN
Trigger: GTTGATCTGTGTTTTAGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCTCACCTAAGTTTTaGTGCATTATAAAACGTAAG +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSSPKF*CIIKRK
Trigger: CTTACGTTTTATAATGCAGCAAAACTTAGGTGAGGA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGAATGGTATGCAAATTaGCTTCAGTTAGTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLEWYAN*LQLVEK
Trigger: TTTTTCCACTAACTGAAGGCAATTTGCATACCATTC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR GCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGGAATAGAATACAATaGCTGATTCTCACTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLWNRIQ*LILTCC
Trigger: ACAACAAGTGAGAATCAGGCATTGTATTCTATTCCA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGAAGTCTTCACTCAGTaGTTTAATAGTAACTATCTG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYEVFTQ*FNSNYL
Trigger: CAGATAGTTACTATTAAACCACTGAGTGAAGACTTC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCGTTTTGCTTCACTTaGACTATTCTAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: NIYRCKSALSVRFASLGLSFCFT*TILKHR
Trigger: TCTGTGTTTTAGAATAGTCCAAGTGAAGCAAAACGA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCGTTTTGCTTCACTTaGACTATTCTAAAACACAGA +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSFCFT*TILKHR
Trigger: TCTGTGTTTTAGAATAGTCCAAGTGAAGCAAAACGA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CCA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGTAACACAATCCTTTaGGATTACTATGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSNTIL*DYYVRK
Trigger: CTTTCTGACATAGTAATCCCAAAGGATTGTGTTACT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 90 bp CCATGGTCGCGGTTGCAGCTGTACTCTGAGCACTCAGACCCCGGTTaGCACGTCCGGGACACAACTTCCGGCTTCTGGCGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PWSRLQLYSEHSDPG*HVRDTTSGFWRRKR
Trigger: CCTCTTCCGCCGCCAGAAGCCGGAAGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCGCGACCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS TCA 90 bp CGCTGCTTGTTCTTCCCGCCCATGGTCGCGGTTGCAGCTGTACTCTaGGCACTCAGACCCCGGTTGACACGTCCGGGACACAACTTCCGG +
Preference number: 5 (lower is better)
Translates to: RCLFFPPMVAVAAVL*ALRPRLTRPGHNFR
Trigger: CCGGAAGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCGGGAAGAACAAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS GCA 90 bp GTTCCCTTTAGTTCGCTGCTTGTTCTTCCCGCCCATGGTCGCGGTTaGAGCTGTACTCTGAGCACTCAGACCCCGGTTGACACGTCCGGG +
Preference number: 5 (lower is better)
Translates to: VPFSSLLVLPAHGRG*SCTLSTQTPVDTSG
Trigger: CCCGGACGTGTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCGCACTCAGACCCCGGTaGACACGTCCGGGACACAAC +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCALRPR*TRPGHN
Trigger: GTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGC...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS CCA 90 bp GAGATGAGGAGGCTAGTGAGTCATGGAAGCGCAGGCAGCAAACACTaGCTAGGAACTTCCAATCACTGCTCAGGAAGAGGATTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EMRRLVSHGSAGSKH*LGTSNHCSGRGFSS
Trigger: GGAAGAAAATCCTCTTCCTGAGCAGTGATTGGAAGTTCCTAGCCAGTGTTTGCTGCCTGCGCTTCCATGACTCACTAGCCTCCTCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGCACTCAGACCCCGGTaGACACGTCCGGGACACAAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSALRPR*TRPGHN
Trigger: GTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCGCCCATGGTCGCGGTaGCAGCTGTACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRPWSR*QLYSEH
Trigger: GTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCCTTTAGTTCGCTGCTaGTTCTTCCCGCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCPLVRC*FFPPMV
Trigger: GACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCTTCCTCTGGAACAGTTaGCGGGTCACTGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACFLWNS*RVTECI
Trigger: GATACACTCAGTGACCCGCAAACTGTTCCAGAGGAA...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGCACTCAGACCCCGGTaGACACGTCCGGGACACAAC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKALRPR*TRPGHN
Trigger: GTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACLQMHL*LQTQLV
Trigger: CACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAG...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp GCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAATGGCTTCAGGTTGCTaGCTTGGAGGAAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: AELTACWVGEISTYLVTEMASGC*LGGKAA
Trigger: AGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCAT...TTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCAGCTCGGCCACTGTTaGAAGGCCTCAGGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGQLGHC*KASGSL
Trigger: AAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCTG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTGGAGCTGGGCAGACAATaGGGTCACTGTCATCAATGC +
Preference number: 5 (lower is better)
Translates to: LAGWEKSPHIWSQKSSVLELGRQ*GHCHQC
Trigger: GCATTGATGACAGTGACCCAATTGTCTGCCCAGCTC...CAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp TCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCTTTTCCGTGTCTGCTTaGGCTTCCCAGGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: SAAELTACWVGEISTYLVFSVSA*ASQELR
Trigger: TCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAAA...GACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCAGCTCGGCCACTGTTaGAAGGCCTCAGGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKQLGHC*KASGSL
Trigger: AAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCTG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTTTTTTCAAAAGCTTGTaGTGTGGCTTCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: ICCRTDCLLGGRNLHIFGFFKSL*CGFSDA
Trigger: CGCGTCCGAGAAGCCACACAACAAGCTTTTGAAAAA...ACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp CTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTGCTTCAGGTTGCTTGCTaGGAGGAAAAGCCGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LAGWEKSPHIWSQKSSVLLQVAC*EEKPLQ
Trigger: TTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAG...CAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAATGGCTTCAGGTTGCTaGCTTGGAGGAAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEMASGC*LGGKAA
Trigger: AGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCAT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCTDGLT*DASSFI
Trigger: GATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGT...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS GCA 90 bp CTGATGGGCTCACTTTGGATGCTTCCTCTTTCATCAACTGTGGAATaGGCTGGCACAATGCAGAGACTAACTCAAAATAAGCTGAGCGAA +
Preference number: 5 (lower is better)
Translates to: LMGSLWMLPLSSTVE*AGTMQRLTQNKLSE
Trigger: TTCGCTCAGCTTATTTTGAGTTAGTCTCTGCATTGTGCCAGCGCATTCCACAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACGCCCATGGTCGCGGTaGCAGCTGTACTCTGAGCAC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLRPWSR*QLYSEH
Trigger: GTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCCTTTAGTTCGCTGCTaGTTCTTCCCGCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKPLVRC*FFPPMV
Trigger: GACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCAGCTCGGCCACTGTTaGAAGGCCTCAGGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTQLGHC*KASGSL
Trigger: AAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCTG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAACTGTTCCCTGTTCTTaGGCAAGGAGTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQETVPCS*ARSSAA
Trigger: AGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAGT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTGAGTTCTGTGAGACAGTCTAGCAAATTAAGCAAACCCCAGGAGGGGGTCATGAAGTTTTTCAAAAGCTaGTTGTGTGGCTTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: LSSVRQSSKLSKPQEGVMKFFKS*LCGFSD
Trigger: GTCCGAGAAGCCACACAACAAGCTTTTGAAAAACTT...CATGACCCCCTCCTGGGGTTTGCTTAATTTGCTAGACTGTCTCACAGAACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACTTCAGGTTGCTTGCTaGGAGGAAAAGCCGCTTCAA +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQELQVAC*EEKPLQ
Trigger: TTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATGGCTTCAGGTTGCTaGCTTGGAGGAAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSMASGC*LGGKAA
Trigger: AGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTTGCTGGGTGGGAGAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTGACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: LAGWEKSPHIWSQKSSVLTDGLT*DASSFI
Trigger: GATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGT...CAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTCTCCCACCCAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGGAGCTGGGCAGACAATaGGGTCACTGTCATCAATGC +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGELGRQ*GHCHQC
Trigger: GCATTGATGACAGTGACCCAATTGTCTGCCCAGCTC...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCCTTCACGAATCACAGTaGATAGCTTGGGAAACACAC +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCLHESQ*IAWETH
Trigger: GTGTGTTTCCCAAGCTATCAACTGTGATTCGTGAAG...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp TTGGCTTCCCAGGAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAGAACTGACTGCTaGCTGGGTGGGAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: LASQELRVSAKWLNSCPCCRTDC*LGGRNL
Trigger: GAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCA...ACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTCCTGGGAAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS TCA 90 bp GCAGACAAGAGGACTTGGAGACTGTTGATATCCAAAGATGAAGCCTaGACTTGGTTCTTCAGCCACAGAGCAGACAAATGTAGGAAGGTA +
Preference number: 5 (lower is better)
Translates to: ADKRTWRLLISKDEA*TWFFSHRADKCRKV
Trigger: TACCTTCCTACATTTGTCTGCTCTGTGGCTGAAGAACCAAGTTCAGGCTTCATCTTTGGATATCAACAGTCTCCAAGTCCTCTTGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CCA 90 bp ACTCAGCTGGAGCTCCTCAGTAAAGAATGTTTTAGGGTCCTTATTTaGGACCTCAACTGCTGTCTCTGCATAGGTTGGATTTTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: TQLELLSKECFRVLI*DLNCCLCIGWIFWH
Trigger: ATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAAACATTCTTTACTGAGGAGCTCCAGCTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCCTTTAGTTCGCTGCTaGTTCTTCCCGCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTPLVRC*FFPPMV
Trigger: GACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTACTGTTCCCTGTTCTTaGGCAAGGAGTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSTVPCS*ARSSAA
Trigger: AGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAGT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATTTTTCAAAAGCTTGTaGTGTGGCTTCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEFFKSL*CGFSDA
Trigger: CGCGTCCGAGAAGCCACACAACAAGCTTTTGAAAAA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTTCAGGTTGCTTGCTaGGAGGAAAAGCCGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLQVAC*EEKPLQ
Trigger: TTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTGCTATGGCTTCAGGTaGCTTGCTTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGCYGFR*LAWRKS
Trigger: GCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp AATAGGTTAGATACACCCAAAACGGACTCAACATCAGCTTCTGGCTCACTGATTTGCTATGGCTTCAGGTaGCTTGCTTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: NRLDTPKTDSTSASGSLICYGFR*LAWRKS
Trigger: GCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCA...AATCAGTGAGCCAGAAGCTGATGTTGAGTCCGTTTTGGGTGTATCTAACCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTCCTCTGGAACAGTTaGCGGGTCACTGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFLWNS*RVTECI
Trigger: GATACACTCAGTGACCCGCAAACTGTTCCAGAGGAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGAGCTGGGCAGACAATaGGGTCACTGTCATCAATGC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKELGRQ*GHCHQC
Trigger: GCATTGATGACAGTGACCCAATTGTCTGCCCAGCTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAGATGTACAGCTGGTTGGTCAGAAGCCCAGGTAAAACAGCCTGGGGCTTGCGACGTGAGGAAATTTTaGAAGAAATCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: FRCTAGWSEAQVKQPGACDVRKF*KKSNFG
Trigger: TCCAAAGTTGGATTTCTTCAAAAATTTCCTCACGTC...GCAAGCCCCAGGCTGTTTTACCTGGGCTTCTGACCAACCAGCTGTACATCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCGCTATTTCAAGAGGTTaGGCTTGGACAATACTCTGT +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCAISRG*AWTILC
Trigger: ACAGAGTATTGTCCAAGCCAAACCTCTTGAAATAGC...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTTTCTGCTTGGGGTTaGGGCCAGAAGCCAAGATGT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFSAWG*GQKPRC
Trigger: ACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAACACAGATGTGAGTATTaGCACTTCACGGCAGGTACA +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEHRCEY*HFTAGT
Trigger: TGTACCTGCCGTGAAGTGCAAATACTCACATCTGTG...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS GCA 90 bp CTCCTCAGTAAAGAATGTTTTAGGGTCCTTATTTGGGACCTCAACTaGTGTCTCTGCATAGGTTGGATTTTCTGGCATAAGCCTGAACAG +
Preference number: 5 (lower is better)
Translates to: LLSKECFRVLIWDLN*CLCIGWIFWHKPEQ
Trigger: CTGTTCAGGCTTATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAAACATTCTTTACTGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCAGCTCGGCCACTGTTaGAAGGCCTCAGGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYQLGHC*KASGSL
Trigger: AAGGGAACCTGAGGCCTTCAAACAGTGGCCGAGCTG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGACTGTTCCCTGTTCTTaGGCAAGGAGTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKTVPCS*ARSSAA
Trigger: AGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAGT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTTTTCAAAAGCTTGTaGTGTGGCTTCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFFKSL*CGFSDA
Trigger: CGCGTCCGAGAAGCCACACAACAAGCTTTTGAAAAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGLQMHL*LQTQLV
Trigger: CACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLQMHL*LQTQLV
Trigger: CACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATGGCTTCAGGTTGCTaGCTTGGAGGAAAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTMASGC*LGGKAA
Trigger: AGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGCTATGGCTTCAGGTaGCTTGCTTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKCYGFR*LAWRKS
Trigger: GCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCCTCTGGAACAGTTaGCGGGTCACTGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFLWNS*RVTECI
Trigger: GATACACTCAGTGACCCGCAAACTGTTCCAGAGGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGAGCTGGGCAGACAATaGGGTCACTGTCATCAATGC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTELGRQ*GHCHQC
Trigger: GCATTGATGACAGTGACCCAATTGTCTGCCCAGCTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp GCTGTAAATCCACCCCTAAAGCATGCTGATCCATGTTCCCAGAGCTTCTTTTGCTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAA +
Preference number: 5 (lower is better)
Translates to: AVNPPLKHADPCSQSFFCCNPGS*RTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCA...GCAAAAGAAGCTCTGGGAACATGGATCAGCATGCTTTAGGGGTGGATTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp ATCTGCTGCAGAACTGACTGCTTGCTGGGTGGGAGAAATCTCCACATATTTGGTTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAA +
Preference number: 5 (lower is better)
Translates to: ICCRTDCLLGGRNLHIFGCNPGS*RTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCA...ACCAAATATGTGGAGATTTCTCCCACCCAGCAAGCAGTCAGTTCTGCAGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTTTCCGTGTCTGCTTaGGCTTCCCAGGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFSVSA*ASQELR
Trigger: TCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTTTCCGTGTCTGCTTaGGCTTCCCAGGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFSVSA*ASQELR
Trigger: TCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS TCA 90 bp GGTGGGAGAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTaGTTACTGATCATTGACGAGCATCTGTTCAATCTCTTCCTCACC +
Preference number: 5 (lower is better)
Translates to: GGRNLHIFGHRSLLC*LLIIDEHLFNLFLT
Trigger: GGTGAGGAAGAGATTGAACAGATGCTCGTCAATGATCAGTAATCAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTCTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS GCA 90 bp AAAGAATGTTTTAGGGTCCTTATTTGGGACCTCAACTGCTGTCTCTaGATAGGTTGGATTTTCTGGCATAAGCCTGAACAGGTGATAGAG +
Preference number: 5 (lower is better)
Translates to: KECFRVLIWDLNCCL*IGWIFWHKPEQVIE
Trigger: CTCTATCACCTGTTCAGGCTTATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAAACATTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCTTTAGTTCGCTGCTaGTTCTTCCCGCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYPLVRC*FFPPMV
Trigger: GACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTACTGTTCCCTGTTCTTaGGCAAGGAGTTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTTVPCS*ARSSAA
Trigger: AGCTGCAGAACTCCTTGCCAAAGAACAGGGAACAGT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTTTTCAAAAGCTTGTaGTGTGGCTTCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFFKSL*CGFSDA
Trigger: CGCGTCCGAGAAGCCACACAACAAGCTTTTGAAAAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAAAGTTTTTCAAAAGCTaGTTGTGTGGCTTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEKFFKS*LCGFSD
Trigger: GTCCGAGAAGCCACACAACAAGCTTTTGAAAAACTT...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLQMHL*LQTQLV
Trigger: CACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTTCAGGTTGCTTGCTaGGAGGAAAAGCCGCTTCAA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLQVAC*EEKPLQ
Trigger: TTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGCTATGGCTTCAGGTaGCTTGCTTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCYGFR*LAWRKS
Trigger: GCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKTDGLT*DASSFI
Trigger: GATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp GAACTTAGAGTTTCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGCTTCACGAATCACAGTaGATAGCTTGGGAAACACAC +
Preference number: 5 (lower is better)
Translates to: ELRVSAKWLNSCPCCNPGLHESQ*IAWETH
Trigger: GTGTGTTTCCCAAGCTATCAACTGTGATTCGTGAAG...CCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGAAACTCTAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTTCACGAATCACAGTaGATAGCTTGGGAAACACAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLHESQ*IAWETH
Trigger: GTGTGTTTCCCAAGCTATCAACTGTGATTCGTGAAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGTTTCTTTCCATATCATaGTCACAGCACCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGFLSIS*SQHRRA
Trigger: TGCTCTCCGGTGCTGTGACAATGATATGGAAAGAAA...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTTTTCTTTCCATATCATaGTCACAGCACCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSFLSIS*SQHRRA
Trigger: TGCTCTCCGGTGCTGTGACAATGATATGGAAAGAAA...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCCAAGGATATCGCCTTaGAGCCAAGGAGTTACTAAA +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSPRISP*SQGVTK
Trigger: TTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTGG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGACAATCTGCCAAGTaGACCAATTTCTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRQSAK*TNFSPR
Trigger: CCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAGGACTTGGAGACTGTaGATATCCAAAGATGAAGCC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSRTWRL*ISKDEA
Trigger: GGCTTCATCTTTGGATATCAACAGTCTCCAAGTCCT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCCAGTACCTCTGGACTaGCTTCTGATAGATTACAAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSPVPLD*LLIDYN
Trigger: GTTGTAATCTATCAGAAGCAAGTCCAGAGGTACTGG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATGCCTGATTCTCACTaGTTGTCTCCAACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKMPDSH*LSPTKP
Trigger: TGGCTTGGTTGGAGACAACAAGTGAGAATCAGGCAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTATCCAATGCCTTTGTTaGATGTACTTCAGGGATCCC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSIQCLC*MYFRDP
Trigger: GGGATCCCTGAAGTACATCAAACAAAGGCATTGGAT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTTTCTGCTTGGGGTTaGGGCCAGAAGCCAAGATGT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFSAWG*GQKPRC
Trigger: ACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAATTTCTTCAGCTCCTaGAATAGCAGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGNFFSS*NSRNIA
Trigger: GGCTATGTTCCTGCTATTCAAGGAGCTGAAGAAATT...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLQMHL*LQTQLV
Trigger: CACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGAGCTGGGCAGACAATaGGGTCACTGTCATCAATGC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLELGRQ*GHCHQC
Trigger: GCATTGATGACAGTGACCCAATTGTCTGCCCAGCTC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTTCACGAATCACAGTaGATAGCTTGGGAAACACAC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLHESQ*IAWETH
Trigger: GTGTGTTTCCCAAGCTATCAACTGTGATTCGTGAAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTTTCCGTGTCTGCTTaGGCTTCCCAGGAACTTAGA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFSVSA*ASQELR
Trigger: TCTAAGTTCCTGGGAAGCCAAAGCAGACACGGAAAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAATTCAAGAGGTTTGGCTaGGACAATACTCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEFKRFG*DNTLFF
Trigger: GAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGAA...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGCTATTTCAAGAGGTTaGGCTTGGACAATACTCTGT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSAISRG*AWTILC
Trigger: ACAGAGTATTGTCCAAGCCAAACCTCTTGAAATAGC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTTCTTTCCATATCATaGTCACAGCACCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFLSIS*SQHRRA
Trigger: TGCTCTCCGGTGCTGTGACAATGATATGGAAAGAAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGCATTTCAAGTCCACCTaGGTTAGATCATCCAAGACT +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGHFKST*VRSSKT
Trigger: AGTCTTGGATGATCTAACCAAGGTGGACTTGAAATG...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCCAAGGATATCGCCTTaGAGCCAAGGAGTTACTAAA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKPRISP*SQGVTK
Trigger: TTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTGG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAGCAGACAAGAGGACTaGGAGACTGTTGATATCCAA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKSRQED*ETVDIQ
Trigger: TTGGATATCAACAGTCTCCAAGTCCTCTTGTCTGCT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCCAGTACCTCTGGACTaGCTTCTGATAGATTACAAC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKPVPLD*LLIDYN
Trigger: GTTGTAATCTATCAGAAGCAAGTCCAGAGGTACTGG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGACACAGGCAAACAGTaGCACAAGTGGAATAGAATA +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSDTGKQ*HKWNRI
Trigger: TATTCTATTCCACTTGTGCAACTGTTTGCCTGTGTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCAATGGTATCCAGAGTaGTGGAATCAAAGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSQWYPE*WNQRKH
Trigger: GTGCTTTCTTTGATTCCACAACTCTGGATACCATTG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCTCTCTCAGTTCGTTTaGCTTCACTTGGACTATTCT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSLSQFV*LHLDYS
Trigger: AGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGAG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAAGGCTGAAAAACATTaGCTCCCCCAAGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSKAEKH*LPQVSY
Trigger: ATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCTT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 90 bp CCACATATTTGGTCACAGAAGTCTTCTGTGTTGATTACTGATCATTaGCGAGCATCTGTTCAATCTCTTCCTCACCTAAGTTTTGCTGCA +
Preference number: 5 (lower is better)
Translates to: PHIWSQKSSVLITDH*RASVQSLPHLSFAA
Trigger: TGCAGCAAAACTTAGGTGAGGAAGAGATTGAACAGATGCTCGTCAATGATCAGTAATCAACACAGAAGACTTCTGTGACCAAATATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS GCA 90 bp TATAAGATGATCCTGCAGCACACTTGTAATTTCATCCTTACAAAATaGTATGGCTTCAGGTTGCTTGCTTGGAGGAAAAGCCGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: YKMILQHTCNFILTK*YGFRLLAWRKSRFK
Trigger: TTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAAATTACAAGTGTGCTGCAGGATCATCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS CCA 90 bp CTTATTTGGGACCTCAACTGCTGTCTCTGCATAGGTTGGATTTTCTaGCATAAGCCTGAACAGGTGATAGAGCAATTTATTCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: LIWDLNCCLCIGWIF*HKPEQVIEQFIQTL
Trigger: AAGAGTTTGAATAAATTGCTCTATCACCTGTTCAGGCTTATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTGCTATGGCTTCAGGTaGCTTGCTTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYCYGFR*LAWRKS
Trigger: GCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTCCTCTGGAACAGTTaGCGGGTCACTGAGTGTATC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFLWNS*RVTECI
Trigger: GATACACTCAGTGACCCGCAAACTGTTCCAGAGGAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGAAGCAAGAAGACGTGAGGAAATTTTaGAAGAAATCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: TRARYLTATYFHEVGKQEDVRKF*KKSNFG
Trigger: TCCAAAGTTGGATTTCTTCAAAAATTTCCTCACGTC...TTCTTGCTTCCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCATTTCAAGTCCACCTaGGTTAGATCATCCAAGACT +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKHFKST*VRSSKT
Trigger: AGTCTTGGATGATCTAACCAAGGTGGACTTGAAATG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGACAATCTGCCAAGTaGACCAATTTCTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTRQSAK*TNFSPR
Trigger: CCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGACACAGGCAAACAGTaGCACAAGTGGAATAGAATA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKDTGKQ*HKWNRI
Trigger: TATTCTATTCCACTTGTGCAACTGTTTGCCTGTGTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTACATGGGTTTCAGCATaGCATTCTGAAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSTWVSA*HSERMF
Trigger: AAACATCCTTTCAGAATGCAATGCTGAAACCCATGT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGATGATAAACAGCAATTaGCACAGGCCTAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKMINSN*HRPSSE
Trigger: TTCAGAGCTAGGCCTGTGCAAATTGCTGTTTATCAT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGCTAGATGTAAACCATTaGTACAAGCAGGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKLDVNH*YKQAEW
Trigger: CCATTCAGCCTGCTTGTACAAATGGTTTACATCTAG...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGGACAAGTGGATTTGTaGCTAGATGTAAACCATTTG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSGQVDL*LDVNHL
Trigger: CAAATGGTTTACATCTAGCAACAAATCCACTTGTCC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTTTCTGCTTGGGGTTaGGGCCAGAAGCCAAGATGT +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFSAWG*GQKPRC
Trigger: ACATCTTGGCTTCTGGCCCAAACCCCAAGCAGAAAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 90 bp TGTTGGGATAATACCAAGCTTAGAAGAGTCCATCTTTCTGAGAAGTaGGATTCTGAAGATACCCTGGATTCCAAGTCCTCATTACAAAGA +
Preference number: 5 (lower is better)
Translates to: CWDNTKLRRVHLSEK*DSEDTLDSKSSLQR
Trigger: TCTTTGTAATGAGGACTTGGAATCCAGGGTATCTTCAGAATCTCACTTCTCAGAAAGATGGACTCTTCTAAGCTTGGTATTATCCCAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000475344.1
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAATTTCTTCAGCTCCTaGAATAGCAGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTNFFSS*NSRNIA
Trigger: GGCTATGTTCCTGCTATTCAAGGAGCTGAAGAAATT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYTDGLT*DASSFI
Trigger: GATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLTDGLT*DASSFI
Trigger: GATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTGAAACACACTCTTTTTaGCATTTACATGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSETHSF*HLHEAN
Trigger: GTTGGCTTCATGTAAATGCAAAAAAGAGTGTGTTTC...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TATAGAGTTACTAGGGCCAGATATCTGACAGCAACTTATTTTCATGAGGTGGGGGAAACACACTCTTTTTaGCATTTACATGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: YRVTRARYLTATYFHEVGETHSF*HLHEAN
Trigger: GTTGGCTTCATGTAAATGCAAAAAAGAGTGTGTTTC...CCCCACCTCATGAAAATAAGTTGCTGTCAGATATCTGGCCCTAGTAACTCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS-3UTR CAA 90 bp TCTGCTAAATGGTTAAATAGCTGCCCATGTTGCAATCCTGGGTCTTTGAGAACTGAAACACACTCTTTTTaGCATTTACATGAAGCCAAC +
Preference number: 5 (lower is better)
Translates to: SAKWLNSCPCCNPGSLRTETHSF*HLHEAN
Trigger: GTTGGCTTCATGTAAATGCAAAAAAGAGTGTGTTTC...AGTTCTCAAAGACCCAGGATTGCAACATGGGCAGCTATTTAACCATTTAGCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKCNPGS*RTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGTTCAAGAGGTTTGGCTaGGACAATACTCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKFKRFG*DNTLFF
Trigger: GAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGAA...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTCCATCATCTATACTTTaGGTTTGCAGACAAGAATTG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSPSSIL*VCRQEL
Trigger: CAATTCTTGTCTGCAAACCAAAAGTATAGATGATGG...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAATGCCTGATTCTCACTaGTTGTCTCCAACCAAGCCA +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLMPDSH*LSPTKP
Trigger: TGGCTTGGTTGGAGACAACAAGTGAGAATCAGGCAT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGACACAGGCAAACAGTaGCACAAGTGGAATAGAATA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTDTGKQ*HKWNRI
Trigger: TATTCTATTCCACTTGTGCAACTGTTTGCCTGTGTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCAATGGTATCCAGAGTaGTGGAATCAAAGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTQWYPE*WNQRKH
Trigger: GTGCTTTCTTTGATTCCACAACTCTGGATACCATTG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGAGATTTACAGGAAGATaGCCAATGGTATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKRFTGR*PMVSRV
Trigger: AACTCTGGATACCATTGGCAATCTTCCTGTAAATCT...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTATGATAAACAGCAATTaGCACAGGCCTAGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTMINSN*HRPSSE
Trigger: TTCAGAGCTAGGCCTGTGCAAATTGCTGTTTATCAT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTAATCTATCCACAATATaGAAAACACGCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSNLSTI*KTRFSL
Trigger: CAGTGAGAAGCGTGTTTTCAATATTGTGGATAGATT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp CTCAAATTCTCACCCTCTAGAGACTCGCTCAGAGTGATAAATTCACTGACAAGTACACCCTCAAAACGTTaGTCTACGTTATTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: LKFSPSRDSLRVINSLTSTPSKR*STLFFH
Trigger: ATGGAAAAATAACGTAGACAAACGTTTTGAGGGTGT...ACTTGTCAGTGAATTTATCACTCTGAGCGAGTCTCTAGAGGGTGAGAATTTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCTAGATGTAAACCATTaGTACAAGCAGGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTLDVNH*YKQAEW
Trigger: CCATTCAGCCTGCTTGTACAAATGGTTTACATCTAG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 90 bp GAAATCTCCACATATTTGGTCACAGAAGTCTTCTGTGTTGATTACTaGTCATTGACGAGCATCTGTTCAATCTCTTCCTCACCTAAGTTT +
Preference number: 5 (lower is better)
Translates to: EISTYLVTEVFCVDY*SLTSICSISSSPKF
Trigger: AAACTTAGGTGAGGAAGAGATTGAACAGATGCTCGTCAATGATCAGTAATCAACACAGAAGACTTCTGTGACCAAATATGTGGAGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTTCACGAATCACAGTaGATAGCTTGGGAAACACAC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLHESQ*IAWETH
Trigger: GTGTGTTTCCCAAGCTATCAACTGTGATTCGTGAAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ACGGGGAGTAACACAATCCTTTGGGATTACTATGTCAGAAAGAGACATAGAAAGGACGTGAGGAAATTTTaGAAGAAATCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: TGSNTILWDYYVRKRHRKDVRKF*KKSNFG
Trigger: TCCAAAGTTGGATTTCTTCAAAAATTTCCTCACGTC...CTTTCTATGTCTCTTTCTGACATAGTAATCCCAAAGGATTGTGTTACTCCCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTCNPGS*RTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTTTCAAGAGGTTTGGCTaGGACAATACTCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTFKRFG*DNTLFF
Trigger: GAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGAA...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCTTTCCATATCATaGTCACAGCACCGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLFLSIS*SQHRRA
Trigger: TGCTCTCCGGTGCTGTGACAATGATATGGAAAGAAA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCAAGGATATCGCCTTaGAGCCAAGGAGTTACTAAA +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYPRISP*SQGVTK
Trigger: TTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTGG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGACAATCTGCCAAGTaGACCAATTTCTCACCAAGG +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYRQSAK*TNFSPR
Trigger: CCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGGACTTGGAGACTGTaGATATCCAAAGATGAAGCC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYRTWRL*ISKDEA
Trigger: GGCTTCATCTTTGGATATCAACAGTCTCCAAGTCCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGCAGACAAGAGGACTaGGAGACTGTTGATATCCAA +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSRQED*ETVDIQ
Trigger: TTGGATATCAACAGTCTCCAAGTCCTCTTGTCTGCT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGATTTACAGGAAGATaGCCAATGGTATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTRFTGR*PMVSRV
Trigger: AACTCTGGATACCATTGGCAATCTTCCTGTAAATCT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGGACAAGTGGATTTGTaGCTAGATGTAAACCATTTG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTGQVDL*LDVNHL
Trigger: CAAATGGTTTACATCTAGCAACAAATCCACTTGTCC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAGTGGACAAGTGGATTaGTTGCTAGATGTAAACCAT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTSGQVD*LLDVNH
Trigger: ATGGTTTACATCTAGCAACAAATCCACTTGTCCACT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 90 bp GAGATATACGTTAATGTTTCACACATGGGTTTCAGCATTGCATTCTaGAAGGATGTTTCAGACACATCTTTGTTTTCTCCTGTAACAGTC +
Preference number: 5 (lower is better)
Translates to: EIYVNVSHMGFSIAF*KDVSDTSLFSPVTV
Trigger: GACTGTTACAGGAGAAAACAAAGATGTGTCTGAAACATCCTTTCAGAATGCAATGCTGAAACCCATGTGTGAAACATTAACGTATATCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CCA 90 bp GACTCAATAGCTGTTCCTTTGAGATATACGTTAATGTTTCACACATaGGTTTCAGCATTGCATTCTGAAAGGATGTTTCAGACACATCTT +
Preference number: 5 (lower is better)
Translates to: DSIAVPLRYTLMFHT*VSALHSERMFQTHL
Trigger: AAGATGTGTCTGAAACATCCTTTCAGAATGCAATGCTGAAACCCATGTGTGAAACATTAACGTATATCTCAAAGGAACAGCTATTGAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAATTTCTTCAGCTCCTaGAATAGCAGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLNFFSS*NSRNIA
Trigger: GGCTATGTTCCTGCTATTCAAGGAGCTGAAGAAATT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAATTTCTTCAGCTCCTaGAATAGCAGGAACATAGCC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYNFFSS*NSRNIA
Trigger: GGCTATGTTCCTGCTATTCAAGGAGCTGAAGAAATT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAAGTTTTTCAAAAGCTaGTTGTGTGGCTTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLKFFKS*LCGFSD
Trigger: GTCCGAGAAGCCACACAACAAGCTTTTGAAAAACTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAAGTTTTTCAAAAGCTaGTTGTGTGGCTTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYKFFKS*LCGFSD
Trigger: GTCCGAGAAGCCACACAACAAGCTTTTGAAAAACTT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTGACGTGAGGAAATTTTaGAAGAAATCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTDVRKF*KKSNFG
Trigger: TCCAAAGTTGGATTTCTTCAAAAATTTCCTCACGTC...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGCTATTTCAAGAGGTTaGGCTTGGACAATACTCTGT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLAISRG*AWTILC
Trigger: ACAGAGTATTGTCCAAGCCAAACCTCTTGAAATAGC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACATTTCAAGTCCACCTaGGTTAGATCATCCAAGACT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLHFKST*VRSSKT
Trigger: AGTCTTGGATGATCTAACCAAGGTGGACTTGAAATG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCATTTCAAGTCCACCTaGGTTAGATCATCCAAGACT +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYHFKST*VRSSKT
Trigger: AGTCTTGGATGATCTAACCAAGGTGGACTTGAAATG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTCCATCATCTATACTTTaGGTTTGCAGACAAGAATTG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTPSSIL*VCRQEL
Trigger: CAATTCTTGTCTGCAAACCAAAAGTATAGATGATGG...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTAATCTATCCACAATATaGAAAACACGCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTNLSTI*KTRFSL
Trigger: CAGTGAGAAGCGTGTTTTCAATATTGTGGATAGATT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp TTTAAGAGTGGCAAAAGGCAGGTTTTCACTTACTCCACTTCAGCCTATTATACTACACCCTCAAAACGTTaGTCTACGTTATTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: FKSGKRQVFTYSTSAYYTTPSKR*STLFFH
Trigger: ATGGAAAAATAACGTAGACAAACGTTTTGAGGGTGT...AGTATAATAGGCTGAAGTGGAGTAAGTGAAAACCTGCCTTTTGCCACTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTAGATGTAAACCATTaGTACAAGCAGGCTGAATGG +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLDVNH*YKQAEW
Trigger: CCATTCAGCCTGCTTGTACAAATGGTTTACATCTAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTACTCTCTCAGTTCGTTTaGCTTCACTTGGACTATTCT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLLSQFV*LHLDYS
Trigger: AGAATAGTCCAAGTGAAGCAAAACGAACTGAGAGAG...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAAGGCTGAAAAACATTaGCTCCCCCAAGTCTCTTAT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLKAEKH*LPQVSY
Trigger: ATAAGAGACTTGGGGGAGCAAATGTTTTTCAGCCTT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGCAATCCTGGGTCTTaGAGAACTGCATCAATAAAA +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLCNPGS*RTASIK
Trigger: TTTTATTGATGCAGTTCTCAAAGACCCAGGATTGCA...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATTTCAAGAGGTTTGGCTaGGACAATACTCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYFKRFG*DNTLFF
Trigger: GAAAAACAGAGTATTGTCCAAGCCAAACCTCTTGAA...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAAGATTTACAGGAAGATaGCCAATGGTATCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLRFTGR*PMVSRV
Trigger: AACTCTGGATACCATTGGCAATCTTCCTGTAAATCT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATACATGGGTTTCAGCATaGCATTCTGAAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYTWVSA*HSERMF
Trigger: AAACATCCTTTCAGAATGCAATGCTGAAACCCATGT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAACATGGGTTTCAGCATaGCATTCTGAAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLTWVSA*HSERMF
Trigger: AAACATCCTTTCAGAATGCAATGCTGAAACCCATGT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAACACTGCTGACATACTaGCTTGTAAATCTATCCACA +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLTLLTY*LVNLST
Trigger: TGTGGATAGATTTACAAGCAAGTATGTCAGCAGTGT...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATACACTGCTGACATACTaGCTTGTAAATCTATCCACA +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYTLLTY*LVNLST
Trigger: TGTGGATAGATTTACAAGCAAGTATGTCAGCAGTGT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp AATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTAGGACAAGTGGATTTGTaGCTAGATGTAAACCATTTG +
Preference number: 5 (lower is better)
Translates to: NIYRCKSALSVRFASLGLGQVDL*LDVNHL
Trigger: CAAATGGTTTACATCTAGCAACAAATCCACTTGTCC...TAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAGTGGACAAGTGGATTaGTTGCTAGATGTAAACCAT +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYSGQVD*LLDVNH
Trigger: ATGGTTTACATCTAGCAACAAATCCACTTGTCCACT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATGACGTGAGGAAATTTTaGAAGAAATCCAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYDVRKF*KKSNFG
Trigger: TCCAAAGTTGGATTTCTTCAAAAATTTCCTCACGTC...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATCCATCATCTATACTTTaGGTTTGCAGACAAGAATTG +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYPSSIL*VCRQEL
Trigger: CAATTCTTGTCTGCAAACCAAAAGTATAGATGATGG...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS-3UTR CAA 90 bp ATATCTATAGATGTAAATCAGCTCTCTCAGTTCGTTTTGCTTCACTTGGACTATAATCTATCCACAATATaGAAAACACGCTTCTCACTG +
Preference number: 5 (lower is better)
Translates to: ISIDVNQLSQFVLLHLDYNLSTI*KTRFSL
Trigger: CAGTGAGAAGCGTGTTTTCAATATTGTGGATAGATT...ATAGTCCAAGTGAAGCAAAACGAACTGAGAGAGCTGATTTACATCTATAGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp TTCTTCCCGCCCATGGTCGCGGTTGCAGCTGTACTCTaGGCACTCAGACCCCGGTTGACACGTCCGGGACAC +
Preference number: 6 (lower is better)
Translates to: FFPPMVAVAAVL*ALRPRLTRPGH
Trigger: GTGTCCCGGACGTGTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCGGGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS TCA 72 bp CGGTTGCAGCTGTACTCTGAGCACTCAGACCCCGGTTaGCACGTCCGGGACACAACTTCCGGCTTCTGGCGG +
Preference number: 6 (lower is better)
Translates to: RLQLYSEHSDPG*HVRDTTSGFWR
Trigger: CCGCCAGAAGCCGGAAGTTGTGTCCCGGACGTGTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS GCA 72 bp AGTTCGCTGCTTGTTCTTCCCGCCCATGGTCGCGGTTaGAGCTGTACTCTGAGCACTCAGACCCCGGTTGAC +
Preference number: 6 (lower is better)
Translates to: SSLLVLPAHGRG*SCTLSTQTPVD
Trigger: GTCAACCGGGGTCTGAGTGCTCAGAGTACAGCTGCAACCGCGACCATGGGCGGGAAGAACAAGCAGCGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS GCA 72 bp CCACTGTTTGAAGGCCTCAGGTTCCCTTTAGTTCGCTaGTTGTTCTTCCCGCCCATGGTCGCGGTTGCAGCT +
Preference number: 6 (lower is better)
Translates to: PLFEGLRFPLVR*LFFPPMVAVAA
Trigger: AGCTGCAACCGCGACCATGGGCGGGAAGAACAAGCAGCGAACTAAAGGGAACCTGAGGCCTTCAAACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS CCA 72 bp AGGCTAGTGAGTCATGGAAGCGCAGGCAGCAAACACTaGCTAGGAACTTCCAATCACTGCTCAGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: RLVSHGSAGSKH*LGTSNHCSGRG
Trigger: TCCTCTTCCTGAGCAGTGATTGGAAGTTCCTAGCCAGTGTTTGCTGCCTGCGCTTCCATGACTCACTAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS CAA 90 bp CTTCAGGTTGCTTGCTTGGAGGAAAAGCCGCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTGTGTAAGTATCACACTGAGCCATTA +
Preference number: 6 (lower is better)
Translates to: LQVACLEEKPLQMHL*LQTQLVCKYHTEPL
Trigger: TAATGGCTCAGTGTGATACTTACACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS GCA 72 bp CTTGCTTGGAGGAAAAGCCGCTTCAAATGCATCTTTTaGTGCAAACGCAGCTGGTGTGTAAGTATCACACTG +
Preference number: 6 (lower is better)
Translates to: LAWRKSRFKCIF*CKRSWCVSITL
Trigger: CAGTGTGATACTTACACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAGCGGCTTTTCCTCCAAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS CAA 72 bp GCTTGCTTGGAGGAAAAGCCGCTTCAAATGCATCTTTaGCTGCAAACGCAGCTGGTGTGTAAGTATCACACT +
Preference number: 6 (lower is better)
Translates to: ACLEEKPLQMHL*LQTQLVCKYHT
Trigger: AGTGTGATACTTACACACCAGCTGCGTTTGCAGCAAAAGATGCATTTGAAGCGGCTTTTCCTCCAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS CAA 90 bp ATTGGGTCACTGTCATCAATGCTAAGTAGAACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATCAACTGTGGAATGCGCTGGCACAAT +
Preference number: 6 (lower is better)
Translates to: IGSLSSMLSRTDGLT*DASSFINCGMRWHN
Trigger: ATTGTGCCAGCGCATTCCACAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGTTCTACTTAGCATTGATGACAGTGACCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS GCA 72 bp AGTGTGCCATGTTCTCTGGACCTGTTAAATAACAGCTaGAAAAGGCCCGACGTATTACCAAGTACACGTAAG +
Preference number: 6 (lower is better)
Translates to: SVPCSLDLLNNS*KRPDVLPSTRK
Trigger: CTTACGTGTACTTGGTAATACGTCGGGCCTTTTGCAGCTGTTATTTAACAGGTCCAGAGAACATGGCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS GCA 72 bp TTTAGGGTCCTTATTTGGGACCTCAACTGCTGTCTCTaGATAGGTTGGATTTTCTGGCATAAGCCTGAACAG +
Preference number: 6 (lower is better)
Translates to: FRVLIWDLNCCL*IGWIFWHKPEQ
Trigger: CTGTTCAGGCTTATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp CTGTCATCAATGCTAAGTAGAACTGATGGGCTCACTTaGGATGCTTCCTCTTTCATCAACTGTGGAATGCGC +
Preference number: 6 (lower is better)
Translates to: LSSMLSRTDGLT*DASSFINCGMR
Trigger: GCGCATTCCACAGTTGATGAAAGAGGAAGCATCCAAAGTGAGCCCATCAGTTCTACTTAGCATTGATGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS CAA 90 bp GATACCCTGGATTCCAAGTCCTCATTACAAAGACAATCTGCCAAGTaGACCAATTTCTCACCAAGGATATCGCCTTTGAGCCAAGGAGTT +
Preference number: 6 (lower is better)
Translates to: DTLDSKSSLQRQSAK*TNFSPRISPLSQGV
Trigger: AACTCCTTGGCTCAAAGGCGATATCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCTTTGTAATGAGGACTTGGAATCCAGGGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000475344.1
ENST00000614971.4
CDS TCA 72 bp AGGACTTGGAGACTGTTGATATCCAAAGATGAAGCCTaGACTTGGTTCTTCAGCCACAGAGCAGACAAATGT +
Preference number: 6 (lower is better)
Translates to: RTWRLLISKDEA*TWFFSHRADKC
Trigger: ACATTTGTCTGCTCTGTGGCTGAAGAACCAAGTTCAGGCTTCATCTTTGGATATCAACAGTCTCCAAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp CACTGCTCAGGAAGAGGATTTTCTTCCACACAGATGTaGGTATTTGCACTTCACGGCAGGTACATTCCTTTT +
Preference number: 6 (lower is better)
Translates to: HCSGRGFSSTQM*VFALHGRYIPF
Trigger: AAAAGGAATGTACCTGCCGTGAAGTGCAAATACTCACATCTGTGTGGAAGAAAATCCTCTTCCTGAGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS GCA 72 bp AAAAGAGGTCTATGTAACCACTGCATAGGAAGAGACTaGCTCATCTTTTCCCATTCACTGTCGTTCGGCATT +
Preference number: 6 (lower is better)
Translates to: KRGLCNHCIGRD*LIFSHSLSFGI
Trigger: AATGCCGAACGACAGTGAATGGGAAAAGATGAGGCAGTCTCTTCCTATGCAGTGGTTACATAGACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp GCAAACAGTTGCACAAGTGGAATAGAATACAATGCCTaGTTCTCACTTGTTGTCTCCAACCAAGCCAACATG +
Preference number: 6 (lower is better)
Translates to: ANSCTSGIEYNA*FSLVVSNQANM
Trigger: CATGTTGGCTTGGTTGGAGACAACAAGTGAGAATCAGGCATTGTATTCTATTCCACTTGTGCAACTGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp GATTCCAAGTCCTCATTACAAAGACAATCTGCCAAGTaGACCAATTTCTCACCAAGGATATCGCCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: DSKSSLQRQSAK*TNFSPRISPLS
Trigger: GCTCAAAGGCGATATCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCTTTGTAATGAGGACTTGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000475344.1
ENST00000614971.4
CDS CAA 72 bp CAGAAAAACGTCTCACGACACAGTGGACAAGTGGATTaGTTGCTAGATGTAAACCATTTGTACAAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: QKNVSRHSGQVD*LLDVNHLYKQA
Trigger: AGCCTGCTTGTACAAATGGTTTACATCTAGCAACAAATCCACTTGTCCACTGTGTCGTGAGACGTTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp TCCTTAGAGGAGACAAAAGGCCTGAAGAATTATGAGTaGGAGAAGGTTCAGTTGTTAATTCCCAGCCTTCAA +
Preference number: 6 (lower is better)
Translates to: SLEETKGLKNYE*EKVQLLIPSLQ
Trigger: TTGAAGGCTGGGAATTAACAACTGAACCTTCTCTCACTCATAATTCTTCAGGCCTTTTGTCTCCTCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS GCA 72 bp AAAGAATGTTTTAGGGTCCTTATTTGGGACCTCAACTaGTGTCTCTGCATAGGTTGGATTTTCTGGCATAAG +
Preference number: 6 (lower is better)
Translates to: KECFRVLIWDLN*CLCIGWIFWHK
Trigger: CTTATGCCAGAAAATCCAACCTATGCAGAGACAGCAGTTGAGGTCCCAAATAAGGACCCTAAAACATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp GCCAAGTTGACCAATTTCTCACCAAGGATATCGCCTTaGAGCCAAGGAGTTACTAAAGCATGTTTATCTGAA +
Preference number: 6 (lower is better)
Translates to: AKLTNFSPRISP*SQGVTKACLSE
Trigger: TTCAGATAAACATGCTTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTGGTGAGAAATTGGTCAACTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000475344.1
ENST00000614971.4
CDS CAA 72 bp TATGAAGGTCAGAGCCGGAGATTCCCAACAAAACATTaGAGCAGTAGGCTATTACCTGGCAAATGTGTTTTT +
Preference number: 6 (lower is better)
Translates to: YEGQSRRFPTKH*SSRLLPGKCVF
Trigger: AAAAACACATTTGCCAGGTAATAGCCTACTGCTCAAATGTTTTGTTGGGAATCTCCGGCTCTGACCTTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475344.1
CDS CAA 90 bp AGACAATCTGCCAAGTTGACCAATTTCTCACCAAGGATATCGCCTTaGAGCCAAGGAGTTACTAAAGCATGTTTATCTGAACTAGGACAT +
Preference number: 6 (lower is better)
Translates to: RQSAKLTNFSPRISP*SQGVTKACLSELGH
Trigger: ATGTCCTAGTTCAGATAAACATGCTTTAGTAACTCCTTGGCTCAAAGGCGATATCCTTGGTGAGAAATTGGTCAACTTGGCAGATTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000475344.1
ENST00000614971.4
CDS CAA 90 bp ATCACTGCTCAGGAAGAGGATTTTCTTCCACACAGATGTGAGTATTaGCACTTCACGGCAGGTACATTCCTTTTCAATAATCTTAAGAAG +
Preference number: 6 (lower is better)
Translates to: ITAQEEDFLPHRCEY*HFTAGTFLFNNLKK
Trigger: CTTCTTAAGATTATTGAAAAGGAATGTACCTGCCGTGAAGTGCAAATACTCACATCTGTGTGGAAGAAAATCCTCTTCCTGAGCAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS GCA 72 bp AGGAAGAGGATTTTCTTCCACACAGATGTGAGTATTTaGACTTCACGGCAGGTACATTCCTTTTCAATAATC +
Preference number: 6 (lower is better)
Translates to: RKRIFFHTDVSI*TSRQVHSFSII
Trigger: GATTATTGAAAAGGAATGTACCTGCCGTGAAGTGCAAATACTCACATCTGTGTGGAAGAAAATCCTCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS CCA 72 bp TGGTATGGAAGCATTGTTGTTTCTCTAATACTCAGCTaGAGCTCCTCAGTAAAGAATGTTTTAGGGTCCTTA +
Preference number: 6 (lower is better)
Translates to: WYGSIVVSLILS*SSSVKNVLGSL
Trigger: TAAGGACCCTAAAACATTCTTTACTGAGGAGCTCCAGCTGAGTATTAGAGAAACAACAATGCTTCCATACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp ATTTCATCCTTACAAAATGCTATGGCTTCAGGTTGCTaGCTTGGAGGAAAAGCCGCTTCAAATGCATCTTTT +
Preference number: 6 (lower is better)
Translates to: ISSLQNAMASGC*LGGKAASNASF
Trigger: AAAAGATGCATTTGAAGCGGCTTTTCCTCCAAGCAAGCAACCTGAAGCCATAGCATTTTGTAAGGATGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000483326.1
ENST00000614971.4
CDS CAA 72 bp CAGGAAGAGGATTTTCTTCCACACAGATGTGAGTATTaGCACTTCACGGCAGGTACATTCCTTTTCAATAAT +
Preference number: 6 (lower is better)
Translates to: QEEDFLPHRCEY*HFTAGTFLFNN
Trigger: ATTATTGAAAAGGAATGTACCTGCCGTGAAGTGCAAATACTCACATCTGTGTGGAAGAAAATCCTCTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389195.7
CDS CAA 90 bp CAGCAACTAATCTTGCAGGAAGTTTGTGACTCAATAGCTGTTCCTTaGAGATATACGTTAATGTTTCACACATGGGTTTCAGCATTGCAT +
Preference number: 6 (lower is better)
Translates to: QQLILQEVCDSIAVP*RYTLMFHTWVSALH
Trigger: ATGCAATGCTGAAACCCATGTGTGAAACATTAACGTATATCTCAAAGGAACAGCTATTGAGTCACAAACTTCCTGCAAGATTAGTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 90 bp AAATCTCAGAAAAACGTCTCACGACACAGTGGACAAGTGGATTTGTaGCTAGATGTAAACCATTTGTACAAGCAGGCTGAATGGAATTTT +
Preference number: 6 (lower is better)
Translates to: KSQKNVSRHSGQVDL*LDVNHLYKQAEWNF
Trigger: AAAATTCCATTCAGCCTGCTTGTACAAATGGTTTACATCTAGCAACAAATCCACTTGTCCACTGTGTCGTGAGACGTTTTTCTGAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp ACATATTTGGTCACAGAAGTCTTCTGTGTTGATTACTaGTCATTGACGAGCATCTGTTCAATCTCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TYLVTEVFCVDY*SLTSICSISSS
Trigger: TGAGGAAGAGATTGAACAGATGCTCGTCAATGATCAGTAATCAACACAGAAGACTTCTGTGACCAAATATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483326.1
CDS CAA 72 bp AAGACTGTTTCCTTTCTCAGTGCAATTAAGACCATTTaGCTCAATAATGCTGAAGTACACAAATGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: KTVSFLSAIKTI*LNNAEVHKWLG
Trigger: TCCCAGCCATTTGTGTACTTCAGCATTATTGAGCAAAATGGTCTTAATTGCACTGAGAAAGGAAACAGTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 90 bp GTTCCTTTGAGATATACGTTAATGTTTCACACATGGGTTTCAGCATaGCATTCTGAAAGGATGTTTCAGACACATCTTTGTTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: VPLRYTLMFHTWVSA*HSERMFQTHLCFLL
Trigger: CAGGAGAAAACAAAGATGTGTCTGAAACATCCTTTCAGAATGCAATGCTGAAACCCATGTGTGAAACATTAACGTATATCTCAAAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp TACAAAATGTCCACCAGGAAACCAAAATCCTTCCTTTaGTCTTCATTTAGCCAACCTATCAGTTTCTGGTAT +
Preference number: 6 (lower is better)
Translates to: YKMSTRKPKSFL*SSFSQPISFWY
Trigger: ATACCAGAAACTGATAGGTTGGCTAAATGAAGATCAAAGGAAGGATTTTGGTTTCCTGGTGGACATTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000389195.7
ENST00000614971.4
CDS CCA 72 bp AAGACCATTTTGCTCAATAATGCTGAAGTACACAAATaGCTGGGAAGTGTCTTTATGTCCTGTTCCTTAAAA +
Preference number: 6 (lower is better)
Translates to: KTILLNNAEVHK*LGSVFMSCSLK
Trigger: TTTTAAGGAACAGGACATAAAGACACTTCCCAGCCATTTGTGTACTTCAGCATTATTGAGCAAAATGGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CCA 72 bp AAGGTATCCCAGAACATAACAGAAGTCTTCACTCAGTaGTTTAATAGTAACTATCTGTCCAACAGGAATACA +
Preference number: 6 (lower is better)
Translates to: KVSQNITEVFTQ*FNSNYLSNRNT
Trigger: TGTATTCCTGTTGGACAGATAGTTACTATTAAACCACTGAGTGAAGACTTCTGTTATGTTCTGGGATACCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp ATCTTGCAGGAAGTTTGTGACTCAATAGCTGTTCCTTaGAGATATACGTTAATGTTTCACACATGGGTTTCA +
Preference number: 6 (lower is better)
Translates to: ILQEVCDSIAVP*RYTLMFHTWVS
Trigger: TGAAACCCATGTGTGAAACATTAACGTATATCTCAAAGGAACAGCTATTGAGTCACAAACTTCCTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp AAACAGATCATGCAATCTTCAACACCCTCAAAACGTTaGTCTACGTTATTTTTCCATAAAGCTAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KQIMQSSTPSKR*STLFFHKAKPS
Trigger: GGAAGGCTTAGCTTTATGGAAAAATAACGTAGACAAACGTTTTGAGGGTGTTGAAGATTGCATGATCTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS CAA 72 bp AGATATACGTTAATGTTTCACACATGGGTTTCAGCATaGCATTCTGAAAGGATGTTTCAGACACATCTTTGT +
Preference number: 6 (lower is better)
Translates to: RYTLMFHTWVSA*HSERMFQTHLC
Trigger: ACAAAGATGTGTCTGAAACATCCTTTCAGAATGCAATGCTGAAACCCATGTGTGAAACATTAACGTATATCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4
CDS TCA 72 bp TCTTCTTCTTCATCTCCGTATGACTTTAGATTATCCTaGTCATACTGTGGTAATTCAGGCATCAATTTGTAT +
Preference number: 6 (lower is better)
Translates to: SSSSSPYDFRLS*SYCGNSGINLY
Trigger: ATACAAATTGATGCCTGAATTACCACAGTATGATCAGGATAATCTAAAGTCATACGGAGATGAAGAAGAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361371.10
ENST00000389194.7
ENST00000614971.4