RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTK (Homo sapiens)

Ensembl gene IDs: ENSG00000062524

Ensembl transcript IDs: ENST00000263800.11, ENST00000355166.9, ENST00000453182.2, ENST00000561619.5, ENST00000563518.5, ENST00000569283.1

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTaGTCCCCATGGACACCTGGGGTGTGTGTAAGGCGGCCTCTGGCC +
Preference number: 1 (lower is better)
Translates to: GSAQMKDAHNGRAIQ*SPWTPGVCVRRPLA
Trigger: GGCCAGAGGCCGCCTTACACACACCCCAGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR-3UTR GCA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGAGGGAGGGACCCTCAGTaGCTCAGTCCTTACCCTCAG +
Preference number: 2 (lower is better)
Translates to: QVQRCQASPETGPDTQHRGRDPQ*LSPYPQ
Trigger: CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCC...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR-3UTR GCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCTTCCAGCATGGCAAGTaGAGCGCTGCCAGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPFQHGK*SAARPA
Trigger: GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAA...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTGGGAACAGAGGCCGCTaGCATAACAGGCCACCCAGG +
Preference number: 2 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPGNRGR*HNRPPR
Trigger: CCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCC...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR GCA 72 bp GGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTaGCAGGCCAGCCCCGAGACAGGCCCAGACACACAG +
Preference number: 3 (lower is better)
Translates to: GLGWFPAWQVQR*QASPETGPDTQ
Trigger: CTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR CCA 72 bp AAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTaGCTGGGCCCTTCCCTGGGAGGCCTGGGCTGGTTT +
Preference number: 3 (lower is better)
Translates to: KAASGPKIKSWK*LGPSLGGLGWF
Trigger: AAACCAGCCCAGGCCTCCCAGGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
3UTR GCA 72 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTaGTCCCCATGGACACCTGGGGTGTGTGTAAGGCGG +
Preference number: 3 (lower is better)
Translates to: QMKDAHNGRAIQ*SPWTPGVCVRR
Trigger: CCGCCTTACACACACCCCAGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGACGCCCCCTCCTGCAGTaGGCGGCCGGCCTGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRRPLLQ*AAGLRR
Trigger: TCTCCGCAGGCCGGCCGCTCACTGCAGGAGGGGGCG...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263800.11
CDS-3UTR TCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGATTCTCGGGGGAGGCCTaGGTCCGGCCTCGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRFSGEA*VRPRSR
Trigger: GCGGGACCGAGGCCGGACTCAGGCCTCCCCCGAGAA...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCCCGGGGGCTGGGACTTaGCAGCGGCAGGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPPGAGT*QRQGRG
Trigger: TCCTCGCCCCTGCCGCTGGCAAGTCCCAGCCCCCGG...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCTCGGGTCCCGGGGGCTaGGACTTGCCAGCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASSGPGG*DLPAAG
Trigger: CCCTGCCGCTGGCAAGTCCCAGCCCCCGGGACCCGA...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGGCACGCGCCACAGCTaGACGCCTCTCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRGTRHS*TPLSCP
Trigger: CGGGCAGCTGAGAGGCGTGCAGCTGTGGCGCGTGCC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAGCGACAGGTGGTTCTTaGCGCCTTTGCCGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRATGGS*RLCRPR
Trigger: CCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGC...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGCCGAGGCAGACGAGCTaGCTCTCCGGGCTACCTCCG +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLPRQTS*LSGLPP
Trigger: CGGAGGTAGCCCGGAGAGCCAGCTCGTCTGCCTCGG...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGGCAGACGAGCTaGCTCTCCGGGCTACCTCCG +
Preference number: 4 (lower is better)
Translates to: WEAWAGFQHGKCSAARPAPRQTS*LSGLPP
Trigger: CGGAGGTAGCCCGGAGAGCCAGCTCGTCTGCCTCGG...GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGGGCAGAGGCCAGGACTaGGCCGGGCCAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLGRGQD*AGPSPT
Trigger: GGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCC...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGGCGGTACACAGGCCCTaGGCAGCCCCTAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLAVHRP*AAPRRV
Trigger: GACCCTCCTAGGGGCTGCCCAGGGCCTGTGTACCGC...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCGCGGTACACAGGCCCTaGGCAGCCCCTAGGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPAVHRP*AAPRRV
Trigger: GACCCTCCTAGGGGCTGCCCAGGGCCTGTGTACCGC...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCCTGGGGAAACCTCGGTaGCACCTGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPLGKPR*HLVAEA
Trigger: GGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAG...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACCGCATGACCAGAGGTaGTGGCTGGCCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRPHDQR*WLAQVW
Trigger: CCACACCTGGGCCAGCCATCACCTCTGGTCATGCGG...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGCATGACCAGAGGTaGTGGCTGGCCCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: WEAWAGFQHGKCSAARPAPHDQR*WLAQVW
Trigger: CCACACCTGGGCCAGCCATCACCTCTGGTCATGCGG...GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGGCAGCAGGTCCCGCATaGCCAGAGGTGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLAAGPA*PEVMAG
Trigger: GCCAGCCATCACCTCTGGTCATGCGGGACCTGCTGC...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAGAGGTTGTCAGTCTCTaGAGCGTCGCCCCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPREVVSL*SVAPCR
Trigger: GCGGCAGGGGGCGACGCTTCAGAGACTGACAACCTC...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355166.9
CDS-3UTR GCA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGGTCTGTGTGGGCCCATaGCGGCCGCTGGCCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQVCVGP*RPLAPQ
Trigger: CTGCGGGGCCAGCGGCCGGCATGGGCCCACACAGAC...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTTGGGGTGCACGCCTCTCAGCTaGCCGGCGGCCCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: SIGRDPQCLSPYPQGPLGCTPLS*PAAPTV
Trigger: GACCGTGGGGGCCGCCGGGCAGCTGAGAGGCGTGCA...CCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCAGTGAGCGGCCGGCCTaGGGAGAGGGAGCCCGCGAC +
Preference number: 4 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPSERPA*GEGARD
Trigger: GTCGCGGGCTCCCTCTCCGCAGGCCGGCCGCTCACT...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263800.11
CDS-3UTR GCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGTGGCAAGTGCAGCGCTaGCAGGCCAGCCCCGAGACA +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLWQVQR*QASPET
Trigger: TGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCA...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGTGGCAAGTGCAGCGCTaGCAGGCCAGCCCCGAGACA +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQWQVQR*QASPET
Trigger: TGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCA...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCGCTGAGATCAGATACTaGCCAGGGCCCGGCACGCGC +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASAEIRY*PGPGTR
Trigger: GCGCGTGCCGGGCCCTGGCCAGTATCTGATCTCAGC...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGATGCGCCCGCGACAGGTaGTTCTTGGCGCCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRCARDR*FLAPLP
Trigger: CGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCA...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCGGGCATCCACTTGACTaGGAGCAAGGCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPGHPLD*EQGPVP
Trigger: GGGGACCGGGCCTTGCTCCCAGTCAAGTGGATGCCC...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCTTCCAGCATGGCAAGTaGAGCGCTGCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASFQHGK*SAARPA
Trigger: GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAA...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGTTGCCACGGCAGCCCTaGCCACCACTTACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLLPRQP*PPLTGV
Trigger: CACCCCTGTAAGTGGTGGCCAGGGCTGCCGTGGCAA...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCACATTGTGTCTGTGTaGGCCCATGCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASHIVSV*AHAGRW
Trigger: CCAGCGGCCGGCATGGGCCCACACAGACACAATGTG...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAACCAGAGGTGATGGCTaGCCCAGGTGTGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRTRGDG*PRCGRL
Trigger: CAGTCGGCCACACCTGGGCCAGCCATCACCTCTGGT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGCCAGCACCTCCTGGTTaGTGCGCCCAGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLPAPPG*CAQDRA
Trigger: TGCCCTATCCTGGGCGCACCAACCAGGAGGTGCTGG...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGAAAGCTGGAAGTGGCTaGGCCCTTCCCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQKAGSG*ALPWEA
Trigger: GGCCTCCCAGGGAAGGGCCCAGCCACTTCCAGCTTT...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGCTCCCCATGGACACCTaGGGTGTGTGTAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLLPMDT*GVCKAA
Trigger: GGCCGCCTTACACACACCCCAGGTGTCCATGGGGAG...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTTGGGGGGGGTGTGCTGCCGCTaGCGAGACACTCCCCGGACC +
Preference number: 4 (lower is better)
Translates to: SIGRDPQCLSPYPQGPLGGVCCR*RDTPRT
Trigger: GGTCCGGGGAGTGTCTCGCCAGCGGCAGCACACCCC...CCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACT
67% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355166.9
CDS-3UTR TCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTTTCTCGGGGGAGGCCTaGGTCCGGCCTCGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALFSGEA*VRPRSR
Trigger: GCGGGACCGAGGCCGGACTCAGGCCTCCCCCGAGAA...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCATGCACGCCTCTCAGCTaGCCGGCGGCCCCCACGGTC +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSCTPLS*PAAPTV
Trigger: GACCGTGGGGGCCGCCGGGCAGCTGAGAGGCGTGCA...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAGGCACGCGCCACAGCTaGACGCCTCTCAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLGTRHS*TPLSCP
Trigger: CGGGCAGCTGAGAGGCGTGCAGCTGTGGCGCGTGCC...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACGGTTCTTGGCGCCTTTaGCGCCCGCGGCTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDGSWRL*RPRLRR
Trigger: CCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACC...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCCCATCCATCGCCGCGTaGTCTTCAACGGCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPPSIAA*SSTARD
Trigger: GTCTCGAGCCGTTGAAGAGCACGCGGCGATGGATGG...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGGTGACTGCCAGAGGCTaGAGGAAGAGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLVTARG*RKSSLL
Trigger: CAGCAGCGAGCTCTTCCTGCAGCCTCTGGCAGTCAC...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCATGTCCTGGGCCAGTTaGAGCAGGTCCCGCATGACC +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASMSWAS*SRSRMT
Trigger: GGTCATGCGGGACCTGCTGCAACTGGCCCAGGACAT...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCGGGAGGGACCCTCAGTaGCTCAGTCCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASGRDPQ*LSPYPQ
Trigger: CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCC...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGGGGAGGGACCCTCAGTaGCTCAGTCCTTACCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQGRDPQ*LSPYPQ
Trigger: CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCC...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGGGGAGAGCAATCCAGTaGTCCCCATGGACACCTGGG +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLGRAIQ*SPWTPG
Trigger: CCCAGGTGTCCATGGGGAGCACTGGATTGCTCTCCC...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAACCTCGGTGACACCTaGTGGCAGAGGCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPNLGDT*WQRPGL
Trigger: CAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTT...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCACCCTCAGGGCCCCTTaGGGCTCAGGAGCGATAAGT +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASTLRAP*GSGAIS
Trigger: ACTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGT...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACTGGGAGGCCTGGGCTaGTTTCCAGCATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRLGGLG*FPAWQV
Trigger: CACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTCCCCATGGACACCTaGGGTGTGTGTAAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QVQRCQASPETGPDTQHRLPMDT*GVCKAA
Trigger: GGCCGCCTTACACACACCCCAGGTGTCCATGGGGAG...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGAAGGAGGCTCAGTGTTaGGGTTGCCACCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: VQRCQASPETGPDTQHRLKEAQC*GCHHSH
Trigger: GTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTT...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGGGGCATGTAGCCCAGTaGGAAGATCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQGHVAQ*EDLPEQ
Trigger: CTGCTCTGGGAGATCTTCTCACTGGGCTACATGCCC...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACATCCGGGTCCTGAGTaGAGTACTGCAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRHPGPE*STADAP
Trigger: TGGAGCGTCTGCAGTACTGCACTCAGGACCCGGATG...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAACACACAGCACAGACTaGAGGGAACAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRTHSTD*REQRPL
Trigger: CAGCGGCCTCTGTTCCCTGCAGTCTGTGCTGTGTGT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACCACTTACAGGGGTGTaGTGCCGCTGGCGAGACACT +
Preference number: 4 (lower is better)
Translates to: QVQRCQASPETGPDTQHRPLTGV*CRWRDT
Trigger: AGTGTCTCGCCAGCGGCAGCACACCCCTGTAAGTGG...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355166.9
CDS-3UTR CCA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACGCAGAAAAGTCTCCTaGGACCCCGGGCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QVQRCQASPETGPDTQHRRRKVS*DPGLEQ
Trigger: CTGCTCTAGCCCGGGGTCCCAGGAGACTTTTCTGCG...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGCGGTCACCACCACGCTaGTCCCCGCGTACGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQRSPPR*SPRTPR
Trigger: ACGGGGCGTACGCGGGGACCAGCGTGGTGGTGACCG...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAAGGCATTCAGCCAGCTaGAGCTCTGCCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRRHSAS*SSACHW
Trigger: CCAATGGCAGGCAGAGCTCCAGCTGGCTGAATGCCT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGTCTTGGCCACTCGGCTaGGTCCAGCGCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLSWPLG*VQRSSA
Trigger: TGCTGAGCTGCGCTGGACCCAGCCGAGTGGCCAAGA...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGATCTGGACTCAGTTCCTaGGGCTGTGGGGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRSGLSS*GCGGLR
Trigger: CCTAAGACCCCCACAGCCCCAGGAACTGAGTCCAGA...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCCGCTGCTGGGGTGTATaGAGGATACTCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPRCWGV*RILHLP
Trigger: GGGAAGATGGAGTATCCTTCATACACCCCAGCAGCG...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGGCAGGTCCATGCAGGTaGCGTTATCCACAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQAGPCR*RYPQLA
Trigger: AGCTAGCTGTGGATAACGTCACCTGCATGGACCTGC...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGAGATTGGGGGCTGTCCTaGTGGCAGAGGTTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: QVQRCQASPETGPDTQHRDWGLS*WQRFEA
Trigger: AGCTTCGAACCTCTGCCATCAGGACAGCCCCCAATC...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACTGGGGAAACCTCGGTaGCACCTGGTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLLGKPR*HLVAEA
Trigger: GGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAG...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGAAATCCAGCTCATCCTaGGGCGAGCAGAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQKSSSS*GEQSSG
Trigger: GCCAGAACTCTGCTCGCCTCAGGATGAGCTGGATTT...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAAAATCCAGCTCATCCTaGGGCGAGCAGAGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRKSSSS*GEQSSG
Trigger: GCCAGAACTCTGCTCGCCTCAGGATGAGCTGGATTT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCGCAGCAGGTCCCGCATaGCCAGAGGTGATGGCTGGC +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSAAGPA*PEVMAG
Trigger: GCCAGCCATCACCTCTGGTCATGCGGGACCTGCTGC...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCGGATTCCAAAGGTTCTaGGGTTGGAGGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: WEAWAGFQHGKCSAARPAGFQRF*GWRPLD
Trigger: ATCCAGGGGCCTCCAACCTCAGAACCTTTGGAATCC...GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCGGATTCCAAAGGTTCTaGGGTTGGAGGCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPGFQRF*GWRPLD
Trigger: ATCCAGGGGCCTCCAACCTCAGAACCTTTGGAATCC...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGGGGGTCTGCCCAGATaGAGGATGCTCATAATGGGA +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRGGLPR*RMLIMG
Trigger: TCCCATTATGAGCATCCTTCATCTGGGCAGACCCCC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACGAGACGAAGACGCCATaGGCCCGCGACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDETKTP*ARDRWF
Trigger: GAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTC...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCACAGCTAGCTCCATaGCTTCTGGGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LGGLGWFPAWQVQRCQASPQLAP*LLGTGI
Trigger: AATGCCTGTGCCCAGAAGGCATGGAGCTAGCTGTGG...GCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGACCACAGCTAGCTCCATaGCTTCTGGGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRPQLAP*LLGTGI
Trigger: AATGCCTGTGCCCAGAAGGCATGGAGCTAGCTGTGG...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAATCTCCTGCAGGCCCTaGCACTTCTTCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRISCRP*HFFCFT
Trigger: GGTGAAGCAGAAGAAGTGGCAGGGCCTGCAGGAGAT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCCAGAGGTTCGAAGCTTaGTCAGCTCAAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPQRFEA*SAQAQG
Trigger: GCCCTGAGCTTGAGCTGAGCAAGCTTCGAACCTCTG...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCGTCTTGATAGCTACCTaGAGGGGACTGGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LVSSMASAALPGQPRDRPVLIAT*RGLESP
Trigger: TGGGGACTCCAGTCCCCTGCAGGTAGCTATCAAGAC...GGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGTCTTGATAGCTACCTaGAGGGGACTGGAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRVLIAT*RGLESP
Trigger: TGGGGACTCCAGTCCCCTGCAGGTAGCTATCAAGAC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCCACATTGTGTCTGTGTaGGCCCATGCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPHIVSV*AHAGRW
Trigger: CCAGCGGCCGGCATGGGCCCACACAGACACAATGTG...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGAGCTCTGCCTGCCATTaGCAGTCTCTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQSSACH*QSLKGQ
Trigger: CTGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCT...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGAAGCTCTGCCTGCCATTaGCAGTCTCTCAAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRSSACH*QSLKGQ
Trigger: CTGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCT...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCCCAGCACCTCCTGGTTaGTGCGCCCAGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPPAPPG*CAQDRA
Trigger: TGCCCTATCCTGGGCGCACCAACCAGGAGGTGCTGG...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACGGGAACAGAGGCCGCTaGCATAACAGGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDGNRGR*HNRPPR
Trigger: CCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCC...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGCCGGGGGCTGGGACTTaGCAGCGGCAGGGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWPGAGT*QRQGRG
Trigger: TCCTCGCCCCTGCCGCTGGCAAGTCCCAGCCCCCGG...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTCCATCCATCGCCGCGTaGTCTTCAACGGCTCGAGAC +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSPSIAA*SSTARD
Trigger: GTCTCGAGCCGTTGAAGAGCACGCGGCGATGGATGG...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGGTGGTTCTCGGTGACTaGCAGAGGCTGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLVVLGD*QRLQEE
Trigger: CTCTTCCTGCAGCCTCTGGCAGTCACCGAGAACCAC...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTTGGGGATGTCCTGGGCCAGTTaGAGCAGGTCCCGCATGACC +
Preference number: 4 (lower is better)
Translates to: SIGRDPQCLSPYPQGPLGMSWAS*SRSRMT
Trigger: GGTCATGCGGGACCTGCTGCAACTGGCCCAGGACAT...CCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTGCACCTCCTGGTTGGTaGGCCCAGGATAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSAPPGW*AQDRAC
Trigger: ACATGCCCTATCCTGGGCGCACCAACCAGGAGGTGC...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGCATCCGGGTCCTGAGTaGAGTACTGCAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLHPGPE*STADAP
Trigger: TGGAGCGTCTGCAGTACTGCACTCAGGACCCGGATG...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGTTCCAGCATGGCAAGTaGAGCGCTGCCAGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRFQHGK*SAARPA
Trigger: GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAA...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTATTGCCACGGCAGCCCTaGCCACCACTTACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLLPRQP*PPLTGV
Trigger: CACCCCTGTAAGTGGTGGCCAGGGCTGCCGTGGCAA...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGCGCAGAAAAGTCTCCTaGGACCCCGGGCTAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQRRKVS*DPGLEQ
Trigger: CTGCTCTAGCCCGGGGTCCCAGGAGACTTTTCTGCG...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGGGCAGAGGCCAGGACTaGGCCGGGCCAAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWGRGQD*AGPSPT
Trigger: GGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCC...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCACCAGAGGTGATGGCTaGCCCAGGTGTGGCCGACTG +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSTRGDG*PRCGRL
Trigger: CAGTCGGCCACACCTGGGCCAGCCATCACCTCTGGT...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTATCTTGGCCACTCGGCTaGGTCCAGCGCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLSWPLG*VQRSSA
Trigger: TGCTGAGCTGCGCTGGACCCAGCCGAGTGGCCAAGA...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCATCCACTTGACTaGGAGCAAGGCCCGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSGHPLD*EQGPVP
Trigger: GGGGACCGGGCCTTGCTCCCAGTCAAGTGGATGCCC...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGATCGTGCTGCCAACACTaGGTCATGATGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRSCCQH*VMMRYT
Trigger: TGTGTACCGCATCATGACCCAGTGTTGGCAGCACGA...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGATCGTGCTGCCAACACTaGGTCATGATGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRSCCQH*VMMRYT
Trigger: TGTGTACCGCATCATGACCCAGTGTTGGCAGCACGA...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACTTCCTCCTCTGGGGTaGGCCCCAGCTCCATTGGCA +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLLPPLG*APAPLA
Trigger: TGCCAATGGAGCTGGGGCCCACCCCAGAGGAGGAAG...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGGGCTGGTTTCCAGCATaGCAAGTGCAGCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQGWFPA*QVQRCQ
Trigger: CTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCC...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCAAAGCTGGAAGTGGCTaGGCCCTTCCCTGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSKAGSG*ALPWEA
Trigger: GGCCTCCCAGGGAAGGGCCCAGCCACTTCCAGCTTT...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCGAGGGAGAAGATTGCTaGGACGAAGACGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPEGEDC*DEDAMR
Trigger: GCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTC...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACGATTGGGGGCTGTCCTaGTGGCAGAGGTTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDDWGLS*WQRFEA
Trigger: AGCTTCGAACCTCTGCCATCAGGACAGCCCCCAATC...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAAATCTGTCTTGGATGTaGAGATGCCCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPGLVSSMASAALPGQPRNLSWM*RCPPGR
Trigger: CCTTCCTGGAGGGCATCTTCACATCCAAGACAGATT...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGCCAACACTGGGTCATaGTGCGGTACACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRANTGS*CGTQAL
Trigger: CAGGGCCTGTGTACCGCATCATGACCCAGTGTTGGC...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAGCCAACACTGGGTCATaGTGCGGTACACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLANTGS*CGTQAL
Trigger: CAGGGCCTGTGTACCGCATCATGACCCAGTGTTGGC...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGAGACGAAGACGCCATaGGCCCGCGACAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSETKTP*ARDRWF
Trigger: GAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTC...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGTGACTGCCAGAGGCTaGAGGAAGAGCTCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIVTARG*RKSSLL
Trigger: CAGCAGCGAGCTCTTCCTGCAGCCTCTGGCAGTCAC...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGCCGGTAGATATCTCGTaGCATCCCAAAGTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQPVDIS*HPKVPN
Trigger: ATTGGGGACTTTGGGATGGCACGAGATATCTACCGG...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGCACCTCCTGGTTGGTaGGCCCAGGATAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIAPPGW*AQDRAC
Trigger: ACATGCCCTATCCTGGGCGCACCAACCAGGAGGTGC...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGCGGAGCTCAGGCTCGTaGTGCCAACACTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRRSSGS*CQHWVM
Trigger: CATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCG...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAGGGAGAGCAATCCAGTaGTCCCCATGGACACCTGGG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLGRAIQ*SPWTPG
Trigger: CCCAGGTGTCCATGGGGAGCACTGGATTGCTCTCCC...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCACTTACAGGGGTGTGCTaGCGCTGGCGAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSLTGVC*RWRDTP
Trigger: GGGAGTGTCTCGCCAGCGGCAGCACACCCCTGTAAG...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355166.9
CDS-3UTR CCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGCGGTCACCACCACGCTaGTCCCCGCGTACGCCCCGT +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWRSPPR*SPRTPR
Trigger: ACGGGGCGTACGCGGGGACCAGCGTGGTGGTGACCG...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTAGGCATTCAGCCAGCTaGAGCTCTGCCTGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSRHSAS*SSACHW
Trigger: CCAATGGCAGGCAGAGCTCCAGCTGGCTGAATGCCT...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCAAAGTCCCCAATCTTaGCCACTCGGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDQSPQS*PLGWVQ
Trigger: CTGGACCCAGCCGAGTGGCCAAGATTGGGGACTTTG...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCTTCCTCCTCTGGGGTaGGCCCCAGCTCCATTGGCA +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALLPPLG*APAPLA
Trigger: TGCCAATGGAGCTGGGGCCCACCCCAGAGGAGGAAG...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTTGGGGTCTGGACTCAGTTCCTaGGGCTGTGGGGGTCTTAGG +
Preference number: 4 (lower is better)
Translates to: SIGRDPQCLSPYPQGPLGSGLSS*GCGGLR
Trigger: CCTAAGACCCCCACAGCCCCAGGAACTGAGTCCAGA...CCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTGGGAACAGAGGCCGCTaGCATAACAGGCCACCCAGG +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALGNRGR*HNRPPR
Trigger: CCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCC...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATACTGGGAGGCCTGGGCTaGTTTCCAGCATGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSILGGLG*FPAWQV
Trigger: CACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCAG...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAAAGGAGGCTCAGTGTTaGGGTTGCCACCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIKEAQC*GCHHSH
Trigger: GTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTT...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAGTTGACAGCTCATTTTaGCACGGCAGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLVDSSF*HGSPGH
Trigger: GTGGCCAGGGCTGCCGTGGCAAAATGAGCTGTCAAC...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCGTGGTTCTCGGTGACTaGCAGAGGCTGCAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSVVLGD*QRLQEE
Trigger: CTCTTCCTGCAGCCTCTGGCAGTCACCGAGAACCAC...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGATCTCCTGCAGGCCCTaGCACTTCTTCTGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQISCRP*HFFCFT
Trigger: GGTGAAGCAGAAGAAGTGGCAGGGCCTGCAGGAGAT...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACAGCTCAGGCTCGTGCTaGCAACACTGGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: RGRWHNRPPRSLRSIGRDSSGSC*QHWVMM
Trigger: CATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCT...GTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGATTCAGCGGGGAGGCTaGCTCCAAGATACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRIQRGG*LQDTRR
Trigger: CCGCCTAGTATCTTGGAGCCAGCCTCCCCGCTGAAT...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTAACCTCGGTGACACCTaGTGGCAGAGGCCAGGACTG +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALNLGDT*WQRPGL
Trigger: CAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTT...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTACCCTCAGGGCCCCTTaGGGCTCAGGAGCGATAAGT +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALTLRAP*GSGAIS
Trigger: ACTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGT...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGCTGGTTTCCAGCATaGCAAGTGCAGCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSGWFPA*QVQRCQ
Trigger: CTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCC...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATCAAAAGCTGGAAGTaGCTGGGCCCTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSIKSWK*LGPSLG
Trigger: TCCCAGGGAAGGGCCCAGCCACTTCCAGCTTTTGAT...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTGAGGGAGAAGATTGCTaGGACGAAGACGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALEGEDC*DEDAMR
Trigger: GCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTC...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTTCTCTCAAAGGGCAGTaGCTGCAGTTGAGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSSLKGQ*LQLRCL
Trigger: AAGGCACCTCAACTGCAGTCACTGCCCTTTGAGAGA...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAATATCCCTGTGGATaGAGTGATTTTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRQYPCG*SDFPPG
Trigger: ACCTGGAGGAAAATCACTTCATCCACAGGGATATTG...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGGGTCTGCCCAGATaGAGGATGCTCATAATGGGA +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIGGLPR*RMLIMG
Trigger: TCCCATTATGAGCATCCTTCATCTGGGCAGACCCCC...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGTTGACAGCTCATTTTaGCACGGCAGCCCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQVDSSF*HGSPGH
Trigger: GTGGCCAGGGCTGCCGTGGCAAAATGAGCTGTCAAC...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTGGTTCTTGGCGCCTTTaGCGCCCGCGGCTCCGTAGG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPGSWRL*RPRLRR
Trigger: CCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACC...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTAGCCAGCTGGAGCTCTaGCTGCCATTGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALSQLEL*LPLAVS
Trigger: AGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGCT...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTTGGGGCCCTGCCACTTCTTCTaGTTCACCAGAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: SIGRDPQCLSPYPQGPLGPCHFF*FTRIRT
Trigger: GGTCCTGATTCTGGTGAAGCAGAAGAAGTGGCAGGG...CCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGACACACAGCACAGACTaGAGGGAACAGAGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQTHSTD*REQRPL
Trigger: CAGCGGCCTCTGTTCCCTGCAGTCTGTGCTGTGTGT...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGGCTGAGATCAGATACTaGCCAGGGCCCGGCACGCGC +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWAEIRY*PGPGTR
Trigger: GCGCGTGCCGGGCCCTGGCCAGTATCTGATCTCAGC...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTGCGACAGGTGGTTCTTaGCGCCTTTGCCGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPATGGS*RLCRPR
Trigger: CCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGC...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGATCTCTACCTCTCCGTaGTTCTCGGTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQISTSP*FSVTAR
Trigger: TCTGGCAGTCACCGAGAACCACGGAGAGGTAGAGAT...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCATCTCTACCTCTCCGTaGTTCTCGGTGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPISTSP*FSVTAR
Trigger: TCTGGCAGTCACCGAGAACCACGGAGAGGTAGAGAT...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCAGAGTAACATTGGCTaGGGAAACCTCGGTGACACC +
Preference number: 4 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPQSNIG*GNLGDT
Trigger: GGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTG...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp ACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTAGGCGAGCAGAGTTCTaGCAGGGTCTTGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: TAGNRGRWHNRPPRSLRSRRAEF*QGLDSY
Trigger: GTAGCTATCAAGACCCTGCCAGAACTCTGCTCGCCT...ACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCAGGCGAGCAGAGTTCTaGCAGGGTCTTGATAGCTAC +
Preference number: 4 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPRRAEF*QGLDSY
Trigger: GTAGCTATCAAGACCCTGCCAGAACTCTGCTCGCCT...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCATCAAAAGCTGGAAGTaGCTGGGCCCTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSIKSWK*LGPSLG
Trigger: TCCCAGGGAAGGGCCCAGCCACTTCCAGCTTTTGAT...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCACGCTGCTGGGGTGTATaGAGGATACTCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSRCWGV*RILHLP
Trigger: GGGAAGATGGAGTATCCTTCATACACCCCAGCAGCG...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGTCTCTCAAAGGGCAGTaGCTGCAGTTGAGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRSLKGQ*LQLRCL
Trigger: AAGGCACCTCAACTGCAGTCACTGCCCTTTGAGAGA...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGCAGGTCCATGCAGGTaGCGTTATCCACAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQAGPCR*RYPQLA
Trigger: AGCTAGCTGTGGATAACGTCACCTGCATGGACCTGC...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCCCACCGCACAATGTTCTaGTGGCGAAACTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: VRRPLAPRSKAGSGWALPHRTMF*WRNLLM
Trigger: CATCAGCAAGTTTCGCCATCAGAACATTGTGCGGTG...GGGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCAATCTGTCTTGGATGTaGAGATGCCCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPNLSWM*RCPPGR
Trigger: CCTTCCTGGAGGGCATCTTCACATCCAAGACAGATT...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATACCCTGCCACTTCTTCTaGTTCACCAGAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIPCHFF*FTRIRT
Trigger: GGTCCTGATTCTGGTGAAGCAGAAGAAGTGGCAGGG...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGAGGTGTGGCCGACTGTaGCTCAGGAAACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRRCGRL*LRKLFM
Trigger: CATGAAGAGTTTCCTGAGGCACAGTCGGCCACACCT...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTTGCGCCCGCGACAGGTaGTTCTTGGCGCCTTTGCCG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPCARDR*FLAPLP
Trigger: CGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCA...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGTGGCTGGCCCAGGTGTaGCCGACTGTGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWWLAQV*PTVPQE
Trigger: TTCCTGAGGCACAGTCGGCCACACCTGGGCCAGCCA...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACACCGCACAATGTTCTaGTGGCGAAACTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLHRTMF*WRNLLM
Trigger: CATCAGCAAGTTTCGCCATCAGAACATTGTGCGGTG...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTAGGTGTGGCCGACTGTaGCTCAGGAAACTCTTCATG +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALRCGRL*LRKLFM
Trigger: CATGAAGAGTTTCCTGAGGCACAGTCGGCCACACCT...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTTGGCTGGCCCAGGTGTaGCCGACTGTGCCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPWLAQV*PTVPQE
Trigger: TTCCTGAGGCACAGTCGGCCACACCTGGGCCAGCCA...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp TGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCCGCTTTTCAACTTCTCTaGACTCAGTTCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CKAASGPKIKSWKWLGPSAFQLL*TQFLGL
Trigger: CAGCCCCAGGAACTGAGTCCAGAGAAGTTGAAAAGC...GGAAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAGCTTTTCAACTTCTCTaGACTCAGTTCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLAFQLL*TQFLGL
Trigger: CAGCCCCAGGAACTGAGTCCAGAGAAGTTGAAAAGC...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGGGGCATGTAGCCCAGTaGGAAGATCTCCCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWGHVAQ*EDLPEQ
Trigger: CTGCTCTGGGAGATCTTCTCACTGGGCTACATGCCC...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCACCGGTAGATATCTCGTaGCATCCCAAAGTCCCCAAT +
Preference number: 4 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSPVDIS*HPKVPN
Trigger: ATTGGGGACTTTGGGATGGCACGAGATATCTACCGG...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTCGGAGCTCAGGCTCGTaGTGCCAACACTGGGTCATG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPRSSGS*CQHWVM
Trigger: CATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCG...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTAGCCAGCTGGAGCTCTaGCTGCCATTGGCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPSQLEL*LPLAVS
Trigger: AGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGCT...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp TCTGCCCAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGAGCTCAGGCTCGTGCTaGCAACACTGGGTCATGATG +
Preference number: 4 (lower is better)
Translates to: SAQMKDAHNGRAIQCSPWSSGSC*QHWVMM
Trigger: CATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCT...CCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTATTCAGCGGGGAGGCTaGCTCCAAGATACTAGGCGG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPIQRGG*LQDTRR
Trigger: CCGCCTAGTATCTTGGAGCCAGCCTCCCCGCTGAAT...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTCAAAGTCCCCAATCTTaGCCACTCGGCTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPQSPQS*PLGWVQ
Trigger: CTGGACCCAGCCGAGTGGCCAAGATTGGGGACTTTG...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR TCA 90 bp TGTGTAAGGCGGCCTCTGGCCCCAAGATCAAAAGCTGGAAGTGGCTGGGCCCTTCAATATCCCTGTGGATaGAGTGATTTTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CVRRPLAPRSKAGSGWALQYPCG*SDFPPG
Trigger: ACCTGGAGGAAAATCACTTCATCCACAGGGATATTG...AAGGGCCCAGCCACTTCCAGCTTTTGATCTTGGGGCCAGAGGCCGCCTTACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR GCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTCAGAGGTTCGAAGCTTaGTCAGCTCAAGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPQRFEA*SAQAQG
Trigger: GCCCTGAGCTTGAGCTGAGCAAGCTTCGAACCTCTG...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CCA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTCAGAGTAACATTGGCTaGGGAAACCTCGGTGACACC +
Preference number: 4 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPQSNIG*GNLGDT
Trigger: GGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTG...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS GCA 90 bp TACTGGCCAGGGCCCGGCACGCGCCACAGCTGCACGCCTCTCAGCTaGCCGGCGGCCCCCACGGTCACCACCACGCTGGTCCCCGCGTAC +
Preference number: 5 (lower is better)
Translates to: YWPGPGTRHSCTPLS*PAAPTVTTTLVPAY
Trigger: GTACGCGGGGACCAGCGTGGTGGTGACCGTGGGGGCCGCCGGGCAGCTGAGAGGCGTGCAGCTGTGGCGCGTGCCGGGCCCTGGCCAGTA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS TCA 90 bp GGCAGCCCTGGGCTATGTCCTGGGCCAGTTGCAGCAGGTCCCGCATaGCCAGAGGTGATGGCTGGCCCAGGTGTGGCCGACTGTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GSPGLCPGPVAAGPA*PEVMAGPGVADCAS
Trigger: TGAGGCACAGTCGGCCACACCTGGGCCAGCCATCACCTCTGGTCATGCGGGACCTGCTGCAACTGGCCCAGGACATAGCCCAGGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
CDS GCA 90 bp AGACGAAGACGCCATGCGCCCGCGACAGGTGGTTCTTGGCGCCTTTaGCGCCCGCGGCTCCGTAGGCTGAGATCAGATACTGGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RRRRHAPATGGSWRL*RPRLRRLRSDTGQG
Trigger: GCCCTGGCCAGTATCTGATCTCAGCCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS GCA 90 bp GACTCCCCGAGACCGAGGGAGAAGATTGCTGAGACGAAGACGCCATaGGCCCGCGACAGGTGGTTCTTGGCGCCTTTGCCGCCCGCGGCT +
Preference number: 5 (lower is better)
Translates to: DSPRPREKIAETKTP*ARDRWFLAPLPPAA
Trigger: AGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS-3UTR CAA 90 bp GCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGATGGAGGCCCCTGGATTaGAGGGGCTTGAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: AWAGFQHGKCSAARPAPRWRPLD*RGLRPE
Trigger: CTCTGGCCTCAAGCCCCTCAAATCCAGGGGCCTCCA...TCTCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS CCA 90 bp GGCTCTGAGCAGAGTAACATTGGCTGGGGAAACCTCGGTGACACCTaGTGGCAGAGGCCAGGACTGGGCCGGGCCAAGCCCCACCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSEQSNIGWGNLGDT*WQRPGLGRAKPHLA
Trigger: TGCCAGGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000561619.5
ENST00000563518.5
CDS CCA 90 bp GGCTCTGAGCAGAGTAACATTGGCTGGGGAAACCTCGGTGACACCTaGTGGCAGAGGCCAGGACTGGGCCGGGCCAAGCCCCACCCATGC +
Preference number: 5 (lower is better)
Translates to: GSEQSNIGWGNLGDT*WQRPGLGRAKPHPC
Trigger: GCATGGGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569283.1
CDS-3UTR CAA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGTACGCCCCGTCACATaGTGTCTGTGTGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: RPGLVSSMASAALPGQPRVRPVT*CLCGPM
Trigger: CATGGGCCCACACAGACACAATGTGACGGGGCGTAC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS GCA 90 bp CGCTCCAAGATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTGCTaGCAACACTGGGTCATGATGCGGTACACAGGCCCTGGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: RSKMLAKLGRSSGSC*QHWVMMRYTGPGQP
Trigger: GGGCTGCCCAGGGCCTGTGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCATCTTGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
CDS CCA 90 bp TCTGAGCAGAGTAACATTGGCTGGGGAAACCTCGGTGACACCTGGTaGCAGAGGCCAGGACTGGGCCGGGCCAAGCCCCACCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: SEQSNIGWGNLGDTW*QRPGLGRAKPHPCR
Trigger: CCTGCATGGGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569283.1
CDS-3UTR CAA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCACGCGACAGGTGGTTCTaGGCGCCTTTGCCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSRDRWF*APLPPA
Trigger: CGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCG...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGAGAGGGCCTGGGGGCTaGTGCAGGTCCATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RWHNRPPRSLRSIGRDPQRGPGG*CRSMQV
Trigger: CACCTGCATGGACCTGCACAAGCCCCCAGGCCCTCT...CTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGGCTCAGTGTTGAGGTaGCCACCACAGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: RPGLVSSMASAALPGQPRGSVLR*PPQPPS
Trigger: TGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp GCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGTGGGCCCCAGCTCCATaGGCAGGAGTGAATTCAGCA +
Preference number: 5 (lower is better)
Translates to: ASAALPGQPRDRPRHTAQWAPAP*AGVNSA
Trigger: TGCTGAATTCACTCCTGCCAATGGAGCTGGGGCCCA...CTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGTACCCTCAGGGCCCCTaGGGGCTCAGGAGCGATAAG +
Preference number: 5 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLYPQGP*GLRSDK
Trigger: CTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGTA...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp CACCAGGATGTACAGCGACTCCCCGAGACCGAGGGAGAAGATTGCTaGGACGAAGACGCCATGCGCCCGCGACAGGTGGTTCTTGGCGCC +
Preference number: 5 (lower is better)
Translates to: HQDVQRLPETEGEDC*DEDAMRPRQVVLGA
Trigger: GGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTCGCTGTACATCCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS GCA 90 bp AACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTaGCTCAGTCCTTACCCTCAGGGCCCCTTGGGGCTCAGGAGCGAT +
Preference number: 5 (lower is better)
Translates to: NRPPRSLRSIGRDPQ*LSPYPQGPLGLRSD
Trigger: ATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000563518.5
CDS-3UTR CAA 90 bp AGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACCGAGGGAGAAGATaGCTGAGACGAAGACGCCAT +
Preference number: 5 (lower is better)
Translates to: RPGLVSSMASAALPGQPRDRGRR*LRRRRH
Trigger: ATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTC...TCGGGGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp GCCACCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTAAGAGGGCCTGGGGGCTaGTGCAGGTCCATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: ATQEPEEYREGPSVPQSLRGPGG*CRSMQV
Trigger: CACCTGCATGGACCTGCACAAGCCCCCAGGCCCTCT...TAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CAAGTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGATGGGCCCCAGCTCCATaGGCAGGAGTGAATTCAGCA +
Preference number: 5 (lower is better)
Translates to: QVQRCQASPETGPDTQHRWAPAP*AGVNSA
Trigger: TGCTGAATTCACTCCTGCCAATGGAGCTGGGGCCCA...TCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCTGGAGGCCCCTGGATTaGAGGGGCTTGAGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPWRPLD*RGLRPE
Trigger: CTCTGGCCTCAAGCCCCTCAAATCCAGGGGCCTCCA...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp GTGCAGCGCTGCCAGGCCAGCCCCGAGACAGGCCCAGACACACAGCACAGACTGCCAAAGGTTCTGAGGTaGGAGGCCCCTGGATTTGAG +
Preference number: 5 (lower is better)
Translates to: VQRCQASPETGPDTQHRLPKVLR*EAPGFE
Trigger: CTCAAATCCAGGGGCCTCCAACCTCAGAACCTTTGG...CAGTCTGTGCTGTGTGTCTGGGCCTGTCTCGGGGCTGGCCTGGCAGCGCTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp TGGGAGGCCTGGGCTGGTTTCCAGCATGGCAAGTGCAGCGCTGCCAGGCCAGCCCCAAAGGTTCTGAGGTaGGAGGCCCCTGGATTTGAG +
Preference number: 5 (lower is better)
Translates to: WEAWAGFQHGKCSAARPAPKVLR*EAPGFE
Trigger: CTCAAATCCAGGGGCCTCCAACCTCAGAACCTTTGG...GGCTGGCCTGGCAGCGCTGCACTTGCCATGCTGGAAACCAGCCCAGGCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCTACCCTCAGGGCCCCTaGGGGCTCAGGAGCGATAAG +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPYPQGP*GLRSDK
Trigger: CTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGTA...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp GAATCCCAGAGGAGTCTACCACGGCTCTGCTGCGGTGAGTGGTCTTaGAGTCAGCCCCGGGACCCCGCAGAAACCCATCCCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: ESQRSLPRLCCGEWS*SQPRDPAETHPSSL
Trigger: CAGTGAGCTGGGATGGGTTTCTGCGGGGTCCCGGGGCTGACTTCAAGACCACTCACCGCAGCAGAGCCGTGGTAGACTCCTCTGGGATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS TCA 90 bp TGCGGTACCTGGGGAGAGGCAGGAGTTCATGCCCACCCATGGTTGTaGAGGACCTCCCTTCCCGGGCAGCACTCAACTCACACAGGCCCT +
Preference number: 5 (lower is better)
Translates to: CGTWGEAGVHAHPWL*RTSLPGQHSTHTGP
Trigger: AGGGCCTGTGTGAGTTGAGTGCTGCCCGGGAAGGGAGGTCCTTCACAACCATGGGTGGGCATGAACTCCTGCCTCTCCCCAGGTACCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS GCA 90 bp TCAGGGCTCGGCAGCCTCATCTCCTGCAGGCCCTGCCACTTCTTCTaGTTCACTGGGGGTGGGAAGAATAACGGCACACCCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SGLGSLISCRPCHFF*FTGGGKNNGTPSTC
Trigger: GCAGGTGGAGGGTGTGCCGTTATTCTTCCCACCCCCAGTGAAGCAGAAGAAGTGGCAGGGCCTGCAGGAGATGAGGCTGCCGAGCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS CCA 90 bp AGATTGCTGAGACGAAGACGCCATGCGCCCGCGACAGGTGGTTCTTaGCGCCTTTGCCGCCCGCGGCTCCGTAGGCTGAGATCAGATACT +
Preference number: 5 (lower is better)
Translates to: RLLRRRRHAPATGGS*RLCRPRLRRLRSDT
Trigger: AGTATCTGATCTCAGCCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CCA 90 bp TCTGAGCAGAGTAACATTGGCTGGGGAAACCTCGGTGACACCTGGTaGCAGAGGCCAGGACTGGGCCGGGCCAAGCCCCACCTGGCAATA +
Preference number: 5 (lower is better)
Translates to: SEQSNIGWGNLGDTW*QRPGLGRAKPHLAI
Trigger: TATTGCCAGGTGGGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000561619.5
ENST00000563518.5
CDS-3UTR CAA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGCCATCAGCCCAGAGGTaGTCAGTCTCTGAAGCGTCG +
Preference number: 5 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLPSAQR*SVSEAS
Trigger: CGACGCTTCAGAGACTGACAACCTCTGGGCTGATGG...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp CCCACCCAGAATCAGGACCCCACACACCATAAGGAGGCTCAGTGTTaGGGTTGCCACCACAGCCACCATCAGAACCAGAGGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PTQNQDPTHHKEAQC*GCHHSHHQNQRAWG
Trigger: CCCCCAGGCCCTCTGGTTCTGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTTATGGTGTGTGGGGTCCTGATTCTGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453182.2
CDS CCA 90 bp ATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTGCTGCCAACACTaGGTCATGATGCGGTACCTGGGGAGAGGCAGGAGTTCATGCCCA +
Preference number: 5 (lower is better)
Translates to: MLAKLGRSSGSCCQH*VMMRYLGRGRSSCP
Trigger: TGGGCATGAACTCCTGCCTCTCCCCAGGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCGAGCTCTGCCTGCCATaGGCAGTCTCTCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPELCLP*AVSQRA
Trigger: TGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTC...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp GCACAGACTGCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGCTGAGCAGAGTAACATaGGCTGGGGAAACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: AQTAGNRGRWHNRPPRSLLSRVT*AGETSV
Trigger: CACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAG...CAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGCAGTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp CGTACCCAGAATCAGGACCCCACACACCATAAGGAGGCTCAGTGTTaGGGTTGCCACCACAGCCACCATCAGAACCAGAGGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: RTQNQDPTHHKEAQC*GCHHSHHQNQRAWG
Trigger: CCCCCAGGCCCTCTGGTTCTGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTTATGGTGTGTGGGGTCCTGATTCTGGGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561619.5
ENST00000563518.5
CDS GCA 90 bp CTCAGCTCAAGCTCAGGGCTCGGCAGCCTCATCTCCTGCAGGCCCTaGCACTTCTTCTGCTTCACTGGGGGTGGGAAGAATAACGGCACA +
Preference number: 5 (lower is better)
Translates to: LSSSSGLGSLISCRP*HFFCFTGGGKNNGT
Trigger: TGTGCCGTTATTCTTCCCACCCCCAGTGAAGCAGAAGAAGTGGCAGGGCCTGCAGGAGATGAGGCTGCCGAGCCCTGAGCTTGAGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS CCA 90 bp CTTGAAGTCAGCCCCGGGACCCCGCAGAAACCCATCCCAGCTCACTaGAGAGGAGCAGCCTTGAATCAACTGTGCCTGCTAGACGCTTCG +
Preference number: 5 (lower is better)
Translates to: LEVSPGTPQKPIPAH*RGAALNQLCLLDAS
Trigger: CGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCAGTGAGCTGGGATGGGTTTCTGCGGGGTCCCGGGGCTGACTTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS-3UTR CAA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGTACGCCCCGTCACATaGTGTCTGTGTGGGCCCATG +
Preference number: 5 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQVRPVT*CLCGPM
Trigger: CATGGGCCCACACAGACACAATGTGACGGGGCGTAC...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCGACCGAGGGAGAAGATaGCTGAGACGAAGACGCCAT +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPDRGRR*LRRRRH
Trigger: ATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTC...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp AACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATAGGGAGGGGCTCAGTGTTGAGGTaGCCACCACAGCCACCATCA +
Preference number: 5 (lower is better)
Translates to: NRGRWHNRPPRSLRSIGRGSVLR*PPQPPS
Trigger: TGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCC...CCTCCCTATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTGAGCAGAGTAACATaGGCTGGGGAAACCTCGGTG +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPLSRVT*AGETSV
Trigger: CACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAG...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp GCCAGCTGGAGCTCTGCCTGCCATTGGCAGTCTCTCAAAGGGCAGTaGCTGCAGTTGAGGTGCCTTCGGATCTCTACCTCTCCGTGGTTC +
Preference number: 5 (lower is better)
Translates to: ASWSSACHWQSLKGQ*LQLRCLRISTSPWF
Trigger: GAACCACGGAGAGGTAGAGATCCGAAGGCACCTCAACTGCAGTCACTGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS TCA 90 bp CTTCACCAGAATCAGGACCCCACACACCATAAGGAGGCTCAGTGTTaGGGTTGCCACCACAGCCACCATCAGAACCAGAGGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LHQNQDPTHHKEAQC*GCHHSHHQNQRAWG
Trigger: CCCCCAGGCCCTCTGGTTCTGATGGTGGCTGTGGTGGCAACCTCAACACTGAGCCTCCTTATGGTGTGTGGGGTCCTGATTCTGGTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS TCA 90 bp TCCTATCTTAGAATCCCAGAGGAGTCTACCACGGCTCTGCTGCGGTaGGTGGTCTTGAAGTCAGCCCCGGGACCCCGCAGAAACCCATCC +
Preference number: 5 (lower is better)
Translates to: SYLRIPEESTTALLR*VVLKSAPGPRRNPS
Trigger: GGATGGGTTTCTGCGGGGTCCCGGGGCTGACTTCAAGACCACTCACCGCAGCAGAGCCGTGGTAGACTCCTCTGGGATTCTAAGATAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS-3UTR CAA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGCCATCAGCCCAGAGGTaGTCAGTCTCTGAAGCGTCG +
Preference number: 5 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQPSAQR*SVSEAS
Trigger: CGACGCTTCAGAGACTGACAACCTCTGGGCTGATGG...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGAGCTCTGCCTGCCATaGGCAGTCTCTCAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: QEPEEYREGPSVPQSLPSELCLP*AVSQRA
Trigger: TGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTC...TGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp AGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGAGTTCTGGCAGGGTCTaGATAGCTACCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: RSLRSIGRDPQCLSPYPQSSGRV*IATCRG
Trigger: TCCCCTGCAGGTAGCTATCAAGACCCTGCCAGAACT...CTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS-3UTR CAA 90 bp CCTGAGGAGTATAGGGAGGGACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCCTGTCAACCTAAAGTaGACAGCTCATTTTGCCACG +
Preference number: 5 (lower is better)
Translates to: PEEYREGPSVPQSLPSGPPVNLK*TAHFAT
Trigger: CGTGGCAAAATGAGCTGTCAACTTTAGGTTGACAGG...GGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS GCA 90 bp AAACCCATCCCAGCTCACTGGAGAGGAGCAGCCTTGAATCAACTGTaGCTGCTAGACGCTTCGTACCCAGAATCAGGACCCCACACACCA +
Preference number: 5 (lower is better)
Translates to: KPIPAHWRGAALNQL*LLDASYPESGPHTP
Trigger: TGGTGTGTGGGGTCCTGATTCTGGGTACGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCAGTGAGCTGGGATGGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS-3UTR CAA 90 bp GCAGGGAACAGAGGCCGCTGGCATAACAGGCCACCCAGGAGCCTGAGGAGTATACCTGTCAACCTAAAGTaGACAGCTCATTTTGCCACG +
Preference number: 5 (lower is better)
Translates to: AGNRGRWHNRPPRSLRSIPVNLK*TAHFAT
Trigger: CGTGGCAAAATGAGCTGTCAACTTTAGGTTGACAGG...TATACTCCTCAGGCTCCTGGGTGGCCTGTTATGCCAGCGGCCTCTGTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS GCA 90 bp GCCACTTCTTCTGCTTCATGGAGAGGAGCAGCCTTGAATCAACTGTaGCTGCTAGACGCTTCGTACCCAGAATCAGGACCCCACACACCA +
Preference number: 5 (lower is better)
Translates to: ATSSASWRGAALNQL*LLDASYPESGPHTP
Trigger: TGGTGTGTGGGGTCCTGATTCTGGGTACGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCATGAAGCAGAAGAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561619.5
CDS-3UTR CAA 90 bp CAGATGAAGGATGCTCATAATGGGAGAGCAATCCAGTGCTCCCCATGGACACCTAGTTCTGGCAGGGTCTaGATAGCTACCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: QMKDAHNGRAIQCSPWTPSSGRV*IATCRG
Trigger: TCCCCTGCAGGTAGCTATCAAGACCCTGCCAGAACT...AGGTGTCCATGGGGAGCACTGGATTGCTCTCCCATTATGAGCATCCTTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263800.11
ENST00000355166.9
CDS GCA 72 bp ATCAGATACTGGCCAGGGCCCGGCACGCGCCACAGCTaGACGCCTCTCAGCTGCCCGGCGGCCCCCACGGTC +
Preference number: 6 (lower is better)
Translates to: IRYWPGPGTRHS*TPLSCPAAPTV
Trigger: GACCGTGGGGGCCGCCGGGCAGCTGAGAGGCGTGCAGCTGTGGCGCGTGCCGGGCCCTGGCCAGTATCTGAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CAA 72 bp CACCACCACGCTGGTCCCCGCGTACGCCCCGTCACATaGTGTCTGTGTGGGCCCATGCCGGCCGCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: HHHAGPRVRPVT*CLCGPMPAAGP
Trigger: GGGGCCAGCGGCCGGCATGGGCCCACACAGACACAATGTGACGGGGCGTACGCGGGGACCAGCGTGGTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CCA 72 bp AGACGAAGACGCCATGCGCCCGCGACAGGTGGTTCTTaGCGCCTTTGCCGCCCGCGGCTCCGTAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: RRRRHAPATGGS*RLCRPRLRRLR
Trigger: TCTCAGCCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS GCA 72 bp CGCCATGCGCCCGCGACAGGTGGTTCTTGGCGCCTTTaGCGCCCGCGGCTCCGTAGGCTGAGATCAGATACT +
Preference number: 6 (lower is better)
Translates to: RHAPATGGSWRL*RPRLRRLRSDT
Trigger: AGTATCTGATCTCAGCCTACGGAGCCGCGGGCGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CCA 72 bp TCTTCAACGGCTCGAGACTCCCCGAGGCAGACGAGCTaGCTCTCCGGGCTACCTCCGGGACAGGCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: SSTARDSPRQTS*LSGLPPGQASS
Trigger: AGAGGACGCCTGTCCCGGAGGTAGCCCGGAGAGCCAGCTCGTCTGCCTCGGGGAGTCTCGAGCCGTTGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS GCA 72 bp CCCAGGAGCCTGAGGAGTATAGGGAGGGACCCTCAGTaGCTCAGTCCTTACCCTCAGGGCCCCTTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: PRSLRSIGRDPQ*LSPYPQGPLGL
Trigger: GAGCCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTCCCTCCCTATACTCCTCAGGCTCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000563518.5
CDS CCA 72 bp CAGAGTAACATTGGCTGGGGAAACCTCGGTGACACCTaGTGGCAGAGGCCAGGACTGGGCCGGGCCAAGCCC +
Preference number: 6 (lower is better)
Translates to: QSNIGWGNLGDT*WQRPGLGRAKP
Trigger: GGGCTTGGCCCGGCCCAGTCCTGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS CCA 72 bp AAGCTAGGGCGGAGCTCAGGCTCGTGCTGCCAACACTaGGTCATGATGCGGTACACAGGCCCTGGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: KLGRSSGSCCQH*VMMRYTGPGQP
Trigger: GGGCTGCCCAGGGCCTGTGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
CDS CAA 90 bp GCCCCACCAGGATGTACAGCGACTCCCCGAGACCGAGGGAGAAGATaGCTGAGACGAAGACGCCATGCGCCCGCGACAGGTGGTTCTTGG +
Preference number: 6 (lower is better)
Translates to: APPGCTATPRDRGRR*LRRRRHAPATGGSW
Trigger: CCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTCGCTGTACATCCTGGTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS TCA 72 bp GTACAGCGACTCCCCGAGACCGAGGGAGAAGATTGCTaGGACGAAGACGCCATGCGCCCGCGACAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: VQRLPETEGEDC*DEDAMRPRQVV
Trigger: AACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTCGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS TCA 72 bp AGAATCCCAGAGGAGTCTACCACGGCTCTGCTGCGGTaGGTGGTCTTGAAGTCAGCCCCGGGACCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: RIPEESTTALLR*VVLKSAPGPRR
Trigger: TCTGCGGGGTCCCGGGGCTGACTTCAAGACCACTCACCGCAGCAGAGCCGTGGTAGACTCCTCTGGGATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS GCA 72 bp AGACCGAGGGAGAAGATTGCTGAGACGAAGACGCCATaGGCCCGCGACAGGTGGTTCTTGGCGCCTTTGCCG +
Preference number: 6 (lower is better)
Translates to: RPREKIAETKTP*ARDRWFLAPLP
Trigger: CGGCAAAGGCGCCAAGAACCACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CCA 72 bp GGCCTCCTCCAACGACGAAGTCCAGCACCTCCTGGTTaGTGCGCCCAGGATAGGGCATGTAGCCCAGTGAGA +
Preference number: 6 (lower is better)
Translates to: GLLQRRSPAPPG*CAQDRACSPVR
Trigger: TCTCACTGGGCTACATGCCCTATCCTGGGCGCACCAACCAGGAGGTGCTGGACTTCGTCGTTGGAGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
CDS CAA 72 bp CCTTGCGGTCGCGGCCACACCCCTGTCAACCTAAAGTaGACAGCTCATTTTGCCACGGCAGCCCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: PCGRGHTPVNLK*TAHFATAALAT
Trigger: GGTGGCCAGGGCTGCCGTGGCAAAATGAGCTGTCAACTTTAGGTTGACAGGGGTGTGGCCGCGACCGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS CAA 72 bp GGATGTACAGCGACTCCCCGAGACCGAGGGAGAAGATaGCTGAGACGAAGACGCCATGCGCCCGCGACAGGT +
Preference number: 6 (lower is better)
Translates to: GCTATPRDRGRR*LRRRRHAPATG
Trigger: ACCTGTCGCGGGCGCATGGCGTCTTCGTCTCAGCAATCTTCTCCCTCGGTCTCGGGGAGTCGCTGTACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000563518.5
CDS TCA 72 bp TGGGGAGAGGCAGGAGTTCATGCCCACCCATGGTTGTaGAGGACCTCCCTTCCCGGGCAGCACTCAACTCAC +
Preference number: 6 (lower is better)
Translates to: WGEAGVHAHPWL*RTSLPGQHSTH
Trigger: GTGAGTTGAGTGCTGCCCGGGAAGGGAGGTCCTTCACAACCATGGGTGGGCATGAACTCCTGCCTCTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS GCA 72 bp ATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTGCTaGCAACACTGGGTCATGATGCGGTACACAGGCCCT +
Preference number: 6 (lower is better)
Translates to: MLAKLGRSSGSC*QHWVMMRYTGP
Trigger: AGGGCCTGTGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
CDS GCA 72 bp ATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTGCTaGCAACACTGGGTCATGATGCGGTACCTGGGGAGA +
Preference number: 6 (lower is better)
Translates to: MLAKLGRSSGSC*QHWVMMRYLGR
Trigger: TCTCCCCAGGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS GCA 72 bp AAGATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTaGTGCCAACACTGGGTCATGATGCGGTACCTGGGG +
Preference number: 6 (lower is better)
Translates to: KMLAKLGRSSGS*CQHWVMMRYLG
Trigger: CCCCAGGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS CCA 72 bp ACCATGGCCCAGGGCTCTGAGCAGAGTAACATTGGCTaGGGAAACCTCGGTGACACCTGGTGGCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: TMAQGSEQSNIG*GNLGDTWWQRP
Trigger: TGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGAGCCCTGGGCCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS GCA 72 bp GCCTTCTGGGCACAGGCATTCAGCCAGCTGGAGCTCTaGCTGCCATTGGCAGTCTCTCAAAGGGCAGTGACT +
Preference number: 6 (lower is better)
Translates to: AFWAQAFSQLEL*LPLAVSQRAVT
Trigger: AGTCACTGCCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGCTGAATGCCTGTGCCCAGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS GCA 72 bp CTCCTCCAACGACGAAGTCCAGCACCTCCTGGTTGGTaGGCCCAGGATAGGGCATGTAGCCCAGTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LLQRRSPAPPGW*AQDRACSPVRR
Trigger: TCTTCTCACTGGGCTACATGCCCTATCCTGGGCGCACCAACCAGGAGGTGCTGGACTTCGTCGTTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
CDS GCA 72 bp AAGATGCTGGCAAAGCTAGGGCGGAGCTCAGGCTCGTaGTGCCAACACTGGGTCATGATGCGGTACACAGGC +
Preference number: 6 (lower is better)
Translates to: KMLAKLGRSSGS*CQHWVMMRYTG
Trigger: GCCTGTGTACCGCATCATGACCCAGTGTTGGCAGCACGAGCCTGAGCTCCGCCCTAGCTTTGCCAGCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
CDS CCA 72 bp CTGCAGTTGAGGTGCCTTCGGATCTCTACCTCTCCGTaGTTCTCGGTGACTGCCAGAGGCTGCAGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LQLRCLRISTSP*FSVTARGCRKS
Trigger: GCTCTTCCTGCAGCCTCTGGCAGTCACCGAGAACCACGGAGAGGTAGAGATCCGAAGGCACCTCAACTGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
CDS CCA 72 bp AGCTCCATGCCTTCTGGGCACAGGCATTCAGCCAGCTaGAGCTCTGCCTGCCATTGGCAGTCTCTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: SSMPSGHRHSAS*SSACHWQSLKG
Trigger: CCCTTTGAGAGACTGCCAATGGCAGGCAGAGCTCCAGCTGGCTGAATGCCTGTGCCCAGAAGGCATGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS CAA 72 bp GACCCTCAGTGCCTCAGTCCTTACCCTCAGGGCCCCTaGGGGCTCAGGAGCGATAAGTGGGATTCCAAAGGT +
Preference number: 6 (lower is better)
Translates to: DPQCLSPYPQGP*GLRSDKWDSKG
Trigger: ACCTTTGGAATCCCACTTATCGCTCCTGAGCCCCAAGGGGCCCTGAGGGTAAGGACTGAGGCACTGAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000561619.5
ENST00000563518.5
CDS TCA 72 bp CCAGAGGCTGCAGGAAGAGCTCGCTGCTGGGGTGTATaGAGGATACTCCATCTTCCCCATCAGCCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: PEAAGRARCWGV*RILHLPHQPRG
Trigger: ACCTCTGGGCTGATGGGGAAGATGGAGTATCCTTCATACACCCCAGCAGCGAGCTCTTCCTGCAGCCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
CDS TCA 72 bp GCCCTGAGGCTGAGCCCCACACACCGCACAATGTTCTaGTGGCGAAACTTGCTGATGATGAGGGCCTCCATG +
Preference number: 6 (lower is better)
Translates to: ALRLSPTHRTMF*WRNLLMMRASM
Trigger: CATGGAGGCCCTCATCATCAGCAAGTTTCGCCATCAGAACATTGTGCGGTGTGTGGGGCTCAGCCTCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000453182.2
ENST00000561619.5
ENST00000563518.5
ENST00000569283.1
CDS CCA 72 bp AGAGTTCTGGCAGGGTCTGAGCAGAGTAACATTGGCTaGGGAAACCTCGGTGACACCTGGTGGCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: RVLAGSEQSNIG*GNLGDTWWQRP
Trigger: TGGCCTCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGACCCTGCCAGAACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453182.2
CDS CAA 72 bp CGAGCAGAGTTCTGGCAGGGTCTGAGCAGAGTAACATaGGCTGGGGAAACCTCGGTGACACCTGGTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RAEFWQGLSRVT*AGETSVTPGGR
Trigger: TCTGCCACCAGGTGTCACCGAGGTTTCCCCAGCCAATGTTACTCTGCTCAGACCCTGCCAGAACTCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453182.2
CDS TCA 72 bp GCCCCACCTGGCAATAATAGGGATTGGGGGCTGTCCTaGTGGCAGAGGTTCGAAGCTTGCTCAGCTCAAGCT +
Preference number: 6 (lower is better)
Translates to: APPGNNRDWGLS*WQRFEACSAQA
Trigger: AGCTTGAGCTGAGCAAGCTTCGAACCTCTGCCATCAGGACAGCCCCCAATCCCTATTATTGCCAGGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263800.11
ENST00000355166.9
ENST00000561619.5
ENST00000563518.5
CDS GCA 72 bp CCAGCTCACTGGAGAGGAGCAGCCTTGAATCAACTGTaGCTGCTAGACGCTTCGTACCCAGAATCAGGACCC +
Preference number: 6 (lower is better)
Translates to: PAHWRGAALNQL*LLDASYPESGP
Trigger: GGGTCCTGATTCTGGGTACGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCAGTGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563518.5
CDS GCA 72 bp TCTGCTTCATGGAGAGGAGCAGCCTTGAATCAACTGTaGCTGCTAGACGCTTCGTACCCAGAATCAGGACCC +
Preference number: 6 (lower is better)
Translates to: SASWRGAALNQL*LLDASYPESGP
Trigger: GGGTCCTGATTCTGGGTACGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCATGAAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561619.5
CDS CAA 72 bp CCTGCCACTTCTTCTGCTTCATGGAGAGGAGCAGCCTaGAATCAACTGTGCCTGCTAGACGCTTCGTACCCA +
Preference number: 6 (lower is better)
Translates to: PATSSASWRGAA*NQLCLLDASYP
Trigger: TGGGTACGAAGCGTCTAGCAGGCACAGTTGATTCAAGGCTGCTCCTCTCCATGAAGCAGAAGAAGTGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561619.5