RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTF (Homo sapiens)

Ensembl gene IDs: ENSG00000012223

Ensembl transcript IDs: ENST00000231751.9, ENST00000417439.5, ENST00000426532.6, ENST00000431944.1, ENST00000443496.5, ENST00000462667.1, ENST00000478874.2, ENST00000493056.5, ENST00000498301.1

Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGGCAGTGAATGGCTaGGGCTTTCTTGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGAVNG*GFLGEL
Trigger: CAGCTCCCCAAGAAAGCCTCAGCCATTCACTGCCCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
3UTR-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTGGCTGAGGCTTTCTTaGGGAGCTGGGCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKWLRLS*GAGPSS
Trigger: AGAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
3UTR CAA 90 bp CCCTTAGGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTaGGGCATCATACCCAAGACTGCAAGAAAGAGGAGGGGCTGGACC +
Preference number: 2 (lower is better)
Translates to: PLGKPVLGLALNSRP*GIIPKTARKRRGWT
Trigger: GGTCCAGCCCCTCCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCCTAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
3UTR-3UTR CCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAGGAATTGTAAGCAGATaGATGGGCAATCCCCACCTT +
Preference number: 2 (lower is better)
Translates to: QERGGAGPEKLGREGPTVGIVSR*MGNPHL
Trigger: AAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
3UTR-3UTR TCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTAGGAGGGGCTGGACCTaGAAAACTTGGAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: DSASDEQLNLHFSYNSYARRGWT*KTWKGR
Trigger: CCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCT...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
3UTR-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGGCTGAGGCTTTCTTaGGGAGCTGGGCCATCTTCT +
Preference number: 2 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAWLRLS*GAGPSS
Trigger: AGAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCA...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
3UTR-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGATGGCTGAGGCTTTCTaGGGGAGCTGGGCCATCTTC +
Preference number: 3 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRMAEAF*GSWAIF
Trigger: GAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCAT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
3UTR-3UTR CAA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCATGGCTGAGGCTTTCTaGGGGAGCTGGGCCATCTTC +
Preference number: 3 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPMAEAF*GSWAIF
Trigger: GAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCAT...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
3UTR CCA 72 bp TTCTTGCTAAGACGACAGCAGGGAATTGTAAGCAGATaGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: FLLRRQQGIVSR*MGNPHLQQGRP
Trigger: TGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCCTGCTGTCGTCTTAGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
3UTR GCA 72 bp CTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTaGCCTGCCTTGGGGACACGCACACACTCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: LHFSYNSYACSS*PALGTRTHSQA
Trigger: TGCCTGGGAGTGTGTGCGTGTCCCCAAGGCAGGGCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCGTGCCACAACGGCATaGGAAGGGACCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRATTA*EGTRAR
Trigger: TCTGGCCCGGGTCCCTTCTCATGCCGTTGTGGCACG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCACTTGCGCAGCTCCTaGTCGCCCACCGCACACCAC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRHLRSS*SPTAHH
Trigger: GTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCACTTGCGCAGCTCCTaGTCGCCCACCGCACACCAC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKHLRSS*SPTAHH
Trigger: GTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGGAGCCCGTCTGGTTaGAGAGCAGGCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRSPSG*RAGPWG
Trigger: TCCCCATGGGCCTGCTCTTCAACCAGACGGGCTCCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTCCATCCAGCGGTCCTaGGAAGGCCTGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKSIQRS*EGLCGR
Trigger: CCTGCCACACAGGCCTTCGCAGGACCGCTGGATGGA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTCCATCCAGCGGTCCTaGGAAGGCCTGTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRSIQRS*EGLCGR
Trigger: CCTGCCACACAGGCCTTCGCAGGACCGCTGGATGGA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCACAGCTGCCTCAATaGGCTCAGGTGGACCCGTCC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPQLPQ*AQVDPS
Trigger: GGACGGGTCCACCTGAGCCCATTGAGGCAGCTGTGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCGATGCAGTCCTCTGTaGTGGAGGCCGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRCSPL*WRPRSR
Trigger: CCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAGGCCCCAACACACCTaGGGAGAAGAGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKRPQHT*GEELGA
Trigger: TGCCCCCAGCTCTTCTCCCCAGGTGTGTTGGGGCCT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRDTAHH*TLLLRP
Trigger: TGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGAACACAGCTGGCTaGGAAGAACCTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGNTAG*EEPGHS
Trigger: GCTGTGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCGAGACACCACGGCATaGTTCGGGGCCATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRDTTA*FGAMAR
Trigger: TCTTGCCATGGCCCCGAATCATGCCGTGGTGTCTCG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAGGAGCAGGTCACGCTaGCTTCGCTCAAGCCACTCC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKRSRSR*LRSSHS
Trigger: GGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTCAGCACCAGGGCGATaGAGTCCTCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKSAPGR*SPLWWR
Trigger: CCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGGATATTCCAGCCTaGAGTCCTGTCCACGGCGGT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGDIPA*SPVHGG
Trigger: ACCGCCGTGGACAGGACTGCAGGCTGGAATATCCCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKCSPLW*RPRSRS
Trigger: TGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCAACTTCTGTCAGCCTaGACACCCACGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRQLLSA*TPTGSR
Trigger: CCTGCTCCCCGTGGGTGTCCAGGCTGACAGAAGTTG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR TCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACGATACGGCGCACCACTaGACACTCCTCCTACGGCCA +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDDTAHH*TLLLRP
Trigger: TGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATC...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACGGGAACACAGCTGGCTaGGAAGAACCTGGCCACAGC +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDGNTAG*EEPGHS
Trigger: GCTGTGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCC...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAGGCACCAGAGTAGCTaGAGTACGGTTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKRHQSS*STVPGR
Trigger: CCTCCCAGGAACCGTACTTCAGCTACTCTGGTGCCT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGGCACCAGAGTAGCTaGAGTACGGTTCCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRHQSS*STVPGR
Trigger: CCTCCCAGGAACCGTACTTCAGCTACTCTGGTGCCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTAGGGGGCCAGGCCTaGCTCGTATATGAAACCACC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKVGGQA*LVYETT
Trigger: GGTGGTTTCATATACGAGGCAGGCCTGGCCCCCTAC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTCCACTGGTTACACTTaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKSTGYT*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTCAGCACCAGGGCGATaGAGTCCTCTGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDSAPGR*SPLWWR
Trigger: CCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGA...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTCACAGGCTTCCGTTTaGCATCGAGGCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRSQASV*HRGTAA
Trigger: CGCTGCTGTGCCTCGATGGCAAACGGAAGCCTGTGA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCTGCGAAGGCCTGTGTaGCAGGACTTCAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRLRRPV*QDFRPC
Trigger: GCAAGGTCTGAAGTCCTGCCACACAGGCCTTCGCAG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCTGCGAAGGCCTGTGTaGCAGGACTTCAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLRRPV*QDFRPC
Trigger: GCAAGGTCTGAAGTCCTGCCACACAGGCCTTCGCAG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCACCGGGAACACAGCTaGCTGAGAAGAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKHREHS*LRRTWP
Trigger: TGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCCGGTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGACCCGGGCCAGATaGCAGTCTTTGAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGTRAR*QSLNLS
Trigger: GGACAAGTTCAAAGACTGCCATCTGGCCCGGGTCCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGACCCGGGCCAGATaGCAGTCTTTGAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKGTRAR*QSLNLS
Trigger: GGACAAGTTCAAAGACTGCCATCTGGCCCGGGTCCC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTGCAGGAGCCCGTCTaGTTGAAGAGCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRLQEPV*LKSRPM
Trigger: CATGGGCCTGCTCTTCAACCAGACGGGCTCCTGCAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGCCATGGCAAGATaGCAGCTTCTAGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKGAMAR*QLLASV
Trigger: GACTGAGGCTAGAAGCTGCCATCTTGCCATGGCCCC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCTCTCTTTATGCAGCTaGCAGGAGGGCCACGCACTT +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLSLCS*QEGHAL
Trigger: AAGTGCGTGGCCCTCCTGTCAGCTGCATAAAGAGAG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTGCAGTTCGTTCAGCTaGAAGCTGCCGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKCSSFS*KLPPFF
Trigger: GAAGAAGGGCGGCAGCTTTCAGCTGAACGAACTGCA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCGTGCCACAACGGCATaGGAAGGGACCCGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYRATTA*EGTRAR
Trigger: TCTGGCCCGGGTCCCTTCTCATGCCGTTGTGGCACG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGTTCTGGATGGCAGTaGAGTAGCCGGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRSSGWQ*SSRSQG
Trigger: ACCTTGGCTCCGGCTACTTCACTGCCATCCAGAACT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGTAAGGCTAGTGTCTaGTCTCCTAACCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGKASV*SPNHRH
Trigger: GTGGCGGTGGTTAGGAGATCAGACACTAGCCTTACC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCGTTCAGCTGAAAGCTaGCGCCCTTCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKRSAES*RPSSPQ
Trigger: CTGTGGTGAAGAAGGGCGGCAGCTTTCAGCTGAACG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTGGCTGAGAAGAACCTaGCCACAGCTGCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRWLRRT*PQLPQW
Trigger: CCATTGAGGCAGCTGTGGCCAGGTTCTTCTCAGCCA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTGGCTGAGAAGAACCTaGCCACAGCTGCCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKWLRRT*PQLPQW
Trigger: CCATTGAGGCAGCTGTGGCCAGGTTCTTCTCAGCCA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCTCAAGCCACTCCACTaGTTACACTTGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLKPLH*LHLRSS
Trigger: GGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCGGGGCCATGGCAAGATaGCAGCTTCTAGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPGAMAR*QLLASV
Trigger: GACTGAGGCTAGAAGCTGCCATCTTGCCATGGCCCC...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTGGCTGAGGCTTTCTTaGGGAGCTGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRWLRLS*GAGPSS
Trigger: AGAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCTTTCAGCCTCGTCTaGCAGGTCCTCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPFSLV*QVLKHC
Trigger: ACAGTGTTTGAGGACCTGTCAGACGAGGCTGAAAGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCAGATGGCAGTCTTTaGACTTGTCCACTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPDGSL*TCPLAS
Trigger: GGAAGCCAGTGGACAAGTTCAAAGACTGCCATCTGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACGGTAAGGCTAGTGTCTaGTCTCCTAACCACCGCCAC +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDGKASV*SPNHRH
Trigger: GTGGCGGTGGTTAGGAGATCAGACACTAGCCTTACC...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAACTGTCCTTTATCTaGACCGGGAACACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKELSFI*TGNTAG
Trigger: GCCAGCTGTGTTCCCGGTGCAGATAAAGGACAGTTC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCCATTCACACTTCGTaGCACAACGGCATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRAIHTS*HNGMRR
Trigger: CCTTCTCATGCCGTTGTGGCACGAAGTGTGAATGGC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGATTCCACAGGGCAACTaGCACCCTTTCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRIPQGN*HPFLRK
Trigger: CTTCCTGAGGAAAGGGTGGCAGTTGCCCTGTGGAAT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTTTCCGCAATGGCCTaGATACACTGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFSAMA*IHWMGE
Trigger: CTCCCCCATCCAGTGTATCCAGGCCATTGCGGAAAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCCTGTTTTCCGCAATaGCCTGGATACACTGGATGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPCFPQ*PGYTGW
Trigger: CCATCCAGTGTATCCAGGCCATTGCGGAAAACAGGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCCACAGCTGCCTCAATaGGCTCAGGTGGACCCGTCC +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYPQLPQ*AQVDPS
Trigger: GGACGGGTCCACCTGAGCCCATTGAGGCAGCTGTGG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGGAGCCAAAGAGCTaGAATTTCGGTGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKGEPKS*NFGDLS
Trigger: GGACAAGTCACCGAAATTCCAGCTCTTTGGCTCCCC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCTTCCTGCCCTGCCTTaGGGACACGCACACACTCCC +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYLPALP*GHAHTP
Trigger: GGGAGTGTGTGCGTGTCCCCAAGGCAGGGCAGGAAG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACGAGACACCACGGCATaGTTCGGGGCCATGGCAAGA +
Preference number: 4 (lower is better)
Translates to: QERGGAGPEKLGREGPTVRDTTA*FGAMAR
Trigger: TCTTGCCATGGCCCCGAATCATGCCGTGGTGTCTCG...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACGAACTGTCCTTTATCTaGACCGGGAACACAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDELSFI*TGNTAG
Trigger: GCCAGCTGTGTTCCCGGTGCAGATAAAGGACAGTTC...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGATGGCATCCTCCTTaGCATTCACACTTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRWHPP*HSHFVP
Trigger: TGGCACGAAGTGTGAATGGCAAGGAGGATGCCATCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAACAGCAGATCTTTCTaGCCACTAGGGGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKNSRSF*PLGEPK
Trigger: CTTTGGCTCCCCTAGTGGGCAGAAAGATCTGCTGTT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGGGGGATATTCCAGCCTaGAGTCCTGTCCACGGCGGT +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRGDIPA*SPVHGG
Trigger: ACCGCCGTGGACAGGACTGCAGGCTGGAATATCCCC...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCAGCAGCGCAAAGTCTaGCAGCTTCAAATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRQQRKV*QLQILS
Trigger: GCTAAGGATTTGAAGCTGGCAGACTTTGCGCTGCTG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCATCATACCCAAGACTaGAAGAAAGAGGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRHHTQD*KKEEGL
Trigger: CAGCCCCTCCTCTTTCTTGCAGTCTTGGGTATGATG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGGAAGGACAAGGGTTaGAATGGCACTTTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRKDKG*NGTLGY
Trigger: GTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGATTGGAAGCATTTTGTaGCCTCGGGTTGGGATACGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRIGSIL*PRVGIR
Trigger: CCGTATCCCAACCCGAGGCCACAAAATGCTTCCAAT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCTGGATACACTGGATaGGGGAGTCTCTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPGYTG*GSLSLC
Trigger: GCATAAAGAGAGACTCCCCCATCCAGTGTATCCAGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGATGGCCTGGATACACTaGATGGGGGAGTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRMAWIH*MGESLF
Trigger: AAAGAGAGACTCCCCCATCCAGTGTATCCAGGCCAT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTTTTCCGCAATGGCCTaGATACACTGGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDFSAMA*IHWMGE
Trigger: CTCCCCCATCCAGTGTATCCAGGCCATTGCGGAAAA...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACCCCTGTTTTCCGCAATaGCCTGGATACACTGGATGG +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDPCFPQ*PGYTGW
Trigger: CCATCCAGTGTATCCAGGCCATTGCGGAAAACAGGG...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCTCAATGGGCTCAGGTaGACCCGTCCAATTCAAGAA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLNGLR*TRPIQE
Trigger: TTCTTGAATTGGACGGGTCCACCTGAGCCCATTGAG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGACAGGCGACACAGGTTaGGGAACTGTCCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRTGDTG*GTVLYL
Trigger: CAGATAAAGGACAGTTCCCCAACCTGTGTCGCCTGT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGTGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRCSPLW*RPRSRS
Trigger: TGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCA...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCTTTCTTGGGGAGCTaGGCCATCTTCTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRAFLGS*AIFFGF
Trigger: AAAACCGAAGAAGATGGCCCAGCTCCCCAAGAAAGC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGCCACCATCCCAATTaGCTGCAGGATTCAAACTTC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRSHHPN*LQDSNF
Trigger: GAAGTTTGAATCCTGCAGTCAATTGGGATGGTGGCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTCCAAACTTTTCCTGTaGCTGGCGGAGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKSKLFL*LAEKIP
Trigger: TGGAATCTTCTCCGCCAGGCACAGGAAAAGTTTGGA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCACTTATTCTCACCCTaGTCGTCGCCAATACACAGA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRHLFSP*SSPIHR
Trigger: TCTGTGTATTGGCGACGAGCAGGGTGAGAATAAGTG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCGTAGTATCTCTCGTTaGTGTTGGGCACGCACTTAT +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKRSISR*CWARTY
Trigger: ATAAGTGCGTGCCCAACAGCAACGAGAGATACTACG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTCACAGGCTTCCGTTTaGCATCGAGGCACAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYSQASV*HRGTAA
Trigger: CGCTGCTGTGCCTCGATGGCAAACGGAAGCCTGTGA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTTGCTCTTCCTGCCCTaGCTTGGGGACACGCACACA +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYLLFLP*LGDTHT
Trigger: TGTGTGCGTGTCCCCAAGGCAGGGCAGGAAGAGCAA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTTGAACTTGTCCACTaGCTTCCGAGTGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFELVH*LPSVVW
Trigger: CCAGACAACACTCGGAAGCCAGTGGACAAGTTCAAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGAGAAGATTCCAGATaGCATCCTCCTTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGEDSR*HPPCHS
Trigger: TGAATGGCAAGGAGGATGCCATCTGGAATCTTCTCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAACTTTTCCTGTGCCTaGCGGAGAAGATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRNFSCA*RRRFQM
Trigger: CATCTGGAATCTTCTCCGCCAGGCACAGGAAAAGTT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTTGCAGGAGCCCGTCTaGTTGAAGAGCAGGCCCATG +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYLQEPV*LKSRPM
Trigger: CATGGGCCTGCTCTTCAACCAGACGGGCTCCTGCAA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGATCTCTCGTTGCTGTTaGGCACGCACTTATTCTCAC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRISRCC*ARTYSH
Trigger: GTGAGAATAAGTGCGTGCCCAACAGCAACGAGAGAT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTTTGCCATGGAGTCTaGCCAGACACTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFCHGV*PDTQCC
Trigger: ACAACACTGAGTGTCTGGCCAGACTCCATGGCAAAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGAATTGTAAGCAGATaGATGGGCAATCCCCACCTT +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGIVSR*MGNPHL
Trigger: AAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGCTGGAATTTCGGTaGCTTGTCCTTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKELEFR*LVLSKL
Trigger: AAGTTTGGAAAGGACAAGTCACCGAAATTCCAGCTC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGAGTTCTGGATGGCAGTaGAGTAGCCGGAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRSSGWQ*SSRSQG
Trigger: ACCTTGGCTCCGGCTACTTCACTGCCATCCAGAACT...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTCGGTTTTACTTCCTaGGGAATTCACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFGFTS*GIHRLP
Trigger: TGGAAGCCTGTGAATTCCTCAGGAAGTAAAACCGAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTCGGTTTTACTTCCTaGGGAATTCACAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRFGFTS*GIHRLP
Trigger: TGGAAGCCTGTGAATTCCTCAGGAAGTAAAACCGAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGAGGAGGGGCTGGACCTaGAAAACTTGGAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRRRGWT*KTWKGR
Trigger: CCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCT...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCAAACCACATTTGCCTaGAGTGTACACATATCCTCC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKQTTFA*SVHISS
Trigger: GGAGGATATGTGTACACTGCAGGCAAATGTGGTTTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCACCAAACCACATTTaGCTGCAGTGTACACATATC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKAPNHI*LQCTHI
Trigger: GATATGTGTACACTGCAGGCAAATGTGGTTTGGTGC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACCGTAGTATCTCTCGTTaGTGTTGGGCACGCACTTAT +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDRSISR*CWARTY
Trigger: ATAAGTGCGTGCCCAACAGCAACGAGAGATACTACG...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCAGATTAGTAATGCCTaGGACATACTGTGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKQISNA*DILWSQ
Trigger: TTGGGACCACAGTATGTCGCAGGCATTACTAATCTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTATAATTCCTATGCTTaGTCTTCCTGCCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKYNSYA*SSCPAL
Trigger: CAAGGCAGGGCAGGAAGAGCAAGCATAGGAATTATA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTATAAAACCCAGTGGTaGAACTCTGAGCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRYKTQW*NSEPES
Trigger: GGATTCTGGCTCAGAGTTGCACCACTGGGTTTTATA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCGTCCAATTCAAGAATaGACGAAGTGTCCCTATAGG +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRPIQE*TKCPYR
Trigger: CCTATAGGGACACTTCGTCCATTCTTGAATTGGACG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTTTGAACTTGTCCACTaGCTTCCGAGTGTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDFELVH*LPSVVW
Trigger: CCAGACAACACTCGGAAGCCAGTGGACAAGTTCAAA...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACGGAGAAGATTCCAGATaGCATCCTCCTTGCCATTCA +
Preference number: 4 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDGEDSR*HPPCHS
Trigger: TGAATGGCAAGGAGGATGCCATCTGGAATCTTCTCC...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCATCTCTCGTTGCTGTTaGGCACGCACTTATTCTCAC +
Preference number: 4 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPISRCC*ARTYSH
Trigger: GTGAGAATAAGTGCGTGCCCAACAGCAACGAGAGAT...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAATTTAGCCTGTTGGTaGAGCAACACCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKNLACW*SNTCFR
Trigger: CCTGAAACAGGTGTTGCTCCACCAACAGGCTAAATT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCAAATTTAGCCTGTTaGTGGAGCAACACCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRPNLAC*WSNTCF
Trigger: GAAACAGGTGTTGCTCCACCAACAGGCTAAATTTGG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTATGTTGTTTTGCCATaGAGTCTGGCCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKYVVLP*SLARHS
Trigger: TGAGTGTCTGGCCAGACTCCATGGCAAAACAACATA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR TCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGCCAGATGGCAGTCTTTaGACTTGTCCACTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRPDGSL*TCPLAS
Trigger: GGAAGCCAGTGGACAAGTTCAAAGACTGCCATCTGG...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAGCCATTCACACTTCGTaGCACAACGGCATGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QERGGAGPEKLGREGPTVAIHTS*HNGMRR
Trigger: CCTTCTCATGCCGTTGTGGCACGAAGTGTGAATGGC...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCCAAACCACATTTGCCTaGAGTGTACACATATCCTCC +
Preference number: 4 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPQTTFA*SVHISS
Trigger: GGAGGATATGTGTACACTGCAGGCAAATGTGGTTTG...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTTCATATGTTGTTTTaGCATGGAGTCTGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRFHMLF*HGVWPD
Trigger: GTCTGGCCAGACTCCATGGCAAAACAACATATGAAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGACCATCCCAATTGACTaGAGGATTCAAACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKTIPID*RIQTSD
Trigger: GTCTGAAGTTTGAATCCTGCAGTCAATTGGGATGGT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTTCATGTCTGCGGTCTaGAGGCGACTTGGCAAACGA +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYFMSAV*RRLGKR
Trigger: TCGTTTGCCAAGTCGCCTCCAGACCGCAGACATGAA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGATATTCCTTTGCCATTaGAAGCATTTTGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKIFLCH*KHFVAS
Trigger: CGAGGCCACAAAATGCTTCCAATGGCAAAGGAATAT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCTATGTTGTTTTGCCATaGAGTCTGGCCAGACACTCA +
Preference number: 4 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPYVVLP*SLARHS
Trigger: TGAGTGTCTGGCCAGACTCCATGGCAAAACAACATA...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGAATATAAAACCCAGTaGTGCAACTCTGAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPREYKTQ*CNSEPE
Trigger: TTCTGGCTCAGAGTTGCACCACTGGGTTTTATATTC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGCACAGCTTTGACTaGAATATTCATCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKGHSFD*NIHQIC
Trigger: GCAAATTTGATGAATATTTCAGTCAAAGCTGTGCCC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTTCCATCAGTGTTCTaGAAGACAGTGACATCTTTC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRFPSVF*KTVTSF
Trigger: GAAAGATGTCACTGTCTTGCAGAACACTGATGGAAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCAAATCCTTAGCCCATaGCTCATTGTTATTTCCATC +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRQILSP*LIVISI
Trigger: GATGGAAATAACAATGAGGCATGGGCTAAGGATTTG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGCAGCAGCGCAAAGTCTaGCAGCTTCAAATCCTTAGC +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRQQRKV*QLQILS
Trigger: GCTAAGGATTTGAAGCTGGCAGACTTTGCGCTGCTG...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCCTGGATACACTGGATaGGGGAGTCTCTCTTTATGC +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYPGYTG*GSLSLC
Trigger: GCATAAAGAGAGACTCCCCCATCCAGTGTATCCAGG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCTCAATGGGCTCAGGTaGACCCGTCCAATTCAAGAA +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYLNGLR*TRPIQE
Trigger: TTCTTGAATTGGACGGGTCCACCTGAGCCCATTGAG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCCTGCGACATACTGTaGTCCCAAATATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRACDIL*SQIFFI
Trigger: TATGAAAAATATTTGGGACCACAGTATGTCGCAGGC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAGCTTTCTTGGGGAGCTaGGCCATCTTCTTCGGTTTT +
Preference number: 4 (lower is better)
Translates to: QERGGAGPEKLGREGPTVAFLGS*AIFFGF
Trigger: AAAACCGAAGAAGATGGCCCAGCTCCCCAAGAAAGC...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCAGGCCCCAACACACCTaGGGAGAAGAGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCRPQHT*GEELGA
Trigger: TGCCCCCAGCTCTTCTCCCCAGGTGTGTTGGGGCCT...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAAAGGAGCCCGTCTGGTTaGAGAGCAGGCCCATGGGGA +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKRSPSG*RAGPWG
Trigger: TCCCCATGGGCCTGCTCTTCAACCAGACGGGCTCCT...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGACTCAGTGTTGTCATTaGACAGAAGGTTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKTQCCH*TEGFWF
Trigger: AAACCAAAAACCTTCTGTTCAATGACAACACTGAGT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR GCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGCACTTATTCTCACCCTaGTCGTCGCCAATACACAGA +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRHLFSP*SSPIHR
Trigger: TCTGTGTATTGGCGACGAGCAGGGTGAGAATAAGTG...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGAACTTTTCCTGTGCCTaGCGGAGAAGATTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRNFSCA*RRRFQM
Trigger: CATCTGGAATCTTCTCCGCCAGGCACAGGAAAAGTT...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAACGATGCAGTCCTCTGTaGTGGAGGCCGAGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKRCSPL*WRPRSR
Trigger: CCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCG...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACGAGCTGGAATTTCGGTaGCTTGTCCTTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYELEFR*LVLSKL
Trigger: AAGTTTGGAAAGGACAAGTCACCGAAATTCCAGCTC...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTGGGGCAGTGAATGGCTaGGGCTTTCTTGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAGAVNG*GFLGEL
Trigger: CAGCTCCCCAAGAAAGCCTCAGCCATTCACTGCCCC...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGGCACCAAACCACATTTaGCTGCAGTGTACACATATC +
Preference number: 4 (lower is better)
Translates to: LALNSRPLGIIPKTARKRAPNHI*LQCTHI
Trigger: GATATGTGTACACTGCAGGCAAATGTGGTTTGGTGC...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACAATTTAGCCTGTTGGTaGAGCAACACCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYNLACW*SNTCFR
Trigger: CCTGAAACAGGTGTTGCTCCACCAACAGGCTAAATT...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCCTCTCTTTATGCAGCTaGCAGGAGGGCCACGCACTT +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCLSLCS*QEGHAL
Trigger: AAGTGCGTGGCCCTCCTGTCAGCTGCATAAAGAGAG...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCTGCAGTTCGTTCAGCTaGAAGCTGCCGCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCCSSFS*KLPPFF
Trigger: GAAGAAGGGCGGCAGCTTTCAGCTGAACGAACTGCA...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTGTAGGGGGCCAGGCCTaGCTCGTATATGAAACCACC +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAVGGQA*LVYETT
Trigger: GGTGGTTTCATATACGAGGCAGGCCTGGCCCCCTAC...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCCGTTCAGCTGAAAGCTaGCGCCCTTCTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCRSAES*RPSSPQ
Trigger: CTGTGGTGAAGAAGGGCGGCAGCTTTCAGCTGAACG...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTCCACTGGTTACACTTaGGCAGCTCCTGCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYASTGYT*AAPARP
Trigger: TGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGA...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACATATTCCTTTGCCATTaGAAGCATTTTGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYIFLCH*KHFVAS
Trigger: CGAGGCCACAAAATGCTTCCAATGGCAAAGGAATAT...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTCACCGGGAACACAGCTaGCTGAGAAGAACCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAHREHS*LRRTWP
Trigger: TGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCCGGTG...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCTGGCTGAGGCTTTCTTaGGGAGCTGGGCCATCTTCT +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCWLRLS*GAGPSS
Trigger: AGAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCA...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCGGCCTGCCTCGTATATaGAACCACCATCAAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCGLPRI*NHHQGS
Trigger: TGACCCTTGATGGTGGTTTCATATACGAGGCAGGCC...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAGGGCACAGCTTTGACTaGAATATTCATCAAATTTGC +
Preference number: 4 (lower is better)
Translates to: QERGGAGPEKLGREGPTVGHSFD*NIHQIC
Trigger: GCAAATTTGATGAATATTTCAGTCAAAGCTGTGCCC...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCGACAAGTTTCATGTCTaGGGTCTGGAGGCGACTTGG +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCDKFHV*GLEATW
Trigger: CCAAGTCGCCTCCAGACCGCAGACATGAAACTTGTC...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTTTCCATCAGTGTTCTaGAAGACAGTGACATCTTTC +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYFPSVF*KTVTSF
Trigger: GAAAGATGTCACTGTCTTGCAGAACACTGATGGAAA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCAAATCCTTAGCCCATaGCTCATTGTTATTTCCATC +
Preference number: 4 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYQILSP*LIVISI
Trigger: GATGGAAATAACAATGAGGCATGGGCTAAGGATTTG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTCTCAAGCCACTCCACTaGTTACACTTGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYALKPLH*LHLRSS
Trigger: GGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAG...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAGCCTGCGACATACTGTaGTCCCAAATATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: QERGGAGPEKLGREGPTVACDIL*SQIFFI
Trigger: TATGAAAAATATTTGGGACCACAGTATGTCGCAGGC...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCAACAGCAGATCTTTCTaGCCACTAGGGGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCNSRSF*PLGEPK
Trigger: CTTTGGCTCCCCTAGTGGGCAGAAAGATCTGCTGTT...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCATTGGAAGCATTTTGTaGCCTCGGGTTGGGATACGG +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCIGSIL*PRVGIR
Trigger: CCGTATCCCAACCCGAGGCCACAAAATGCTTCCAAT...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCACAGGCGACACAGGTTaGGGAACTGTCCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCTGDTG*GTVLYL
Trigger: CAGATAAAGGACAGTTCCCCAACCTGTGTCGCCTGT...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTGGGGAGCCAAAGAGCTaGAATTTCGGTGACTTGTCC +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAGEPKS*NFGDLS
Trigger: GGACAAGTCACCGAAATTCCAGCTCTTTGGCTCCCC...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAAAGATGGCATCCTCCTTaGCATTCACACTTCGTGCCA +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKRWHPP*HSHFVP
Trigger: TGGCACGAAGTGTGAATGGCAAGGAGGATGCCATCT...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTATGGCCTGGATACACTaGATGGGGGAGTCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAMAWIH*MGESLF
Trigger: AAAGAGAGACTCCCCCATCCAGTGTATCCAGGCCAT...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAATCCAAACTTTTCCTGTaGCTGGCGGAGAAGATTCCA +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKSKLFL*LAEKIP
Trigger: TGGAATCTTCTCCGCCAGGCACAGGAAAAGTTTGGA...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAATTTTGCCATGGAGTCTaGCCAGACACTCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKFCHGV*PDTQCC
Trigger: ACAACACTGAGTGTCTGGCCAGACTCCATGGCAAAA...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR GCA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAACAGATTAGTAATGCCTaGGACATACTGTGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: REGPTVQVFCQACDFSIKQISNA*DILWSQ
Trigger: TTGGGACCACAGTATGTCGCAGGCATTACTAATCTG...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTCGTCCAATTCAAGAATaGACGAAGTGTCCCTATAGG +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYARPIQE*TKCPYR
Trigger: CCTATAGGGACACTTCGTCCATTCTTGAATTGGACG...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR TCA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTACTCAGTGTTGTCATTaGACAGAAGGTTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: DSASDEQLNLHFSYNSYATQCCH*TEGFWF
Trigger: AAACCAAAAACCTTCTGTTCAATGACAACACTGAGT...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS GCA 90 bp CTGCCTTCGCTCAAGCCACTCCACTGGTTACACTTGCGCAGCTCCTaGTCGCCCACCGCACACCACACGACCCGCGCACGCCGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPSLKPLHWLHLRSS*SPTAHHTTRARRAA
Trigger: GGCTGCCCGGCGTGCGCGGGTCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS GCA 90 bp AGCAGGTCACGCTGCCTTCGCTCAAGCCACTCCACTGGTTACACTTaGGCAGCTCCTGCTCGCCCACCGCACACCACACGACCCGCGCAC +
Preference number: 5 (lower is better)
Translates to: SRSRCLRSSHSTGYT*AAPARPPHTTRPAH
Trigger: GTGCGCGGGTCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 90 bp GAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCAAGCCACTCCACTaGTTACACTTGCGCAGCTCCTGCTCGCCCACCGCACACCACACG +
Preference number: 5 (lower is better)
Translates to: EAEEQVTLPSLKPLH*LHLRSSCSPTAHHT
Trigger: CGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS GCA 90 bp GGGCGATGCAGTCCTCTGTGGTGGAGGCCGAGGAGCAGGTCACGCTaGCTTCGCTCAAGCCACTCCACTGGTTACACTTGCGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: GRCSPLWWRPRSRSR*LRSSHSTGYTCAAP
Trigger: AGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS TCA 90 bp CATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCGAGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: HWKHFVASGWDTAHH*TLLLRPARHSPRAP
Trigger: CGGGGCCCTCGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000417439.5
CDS CCA 90 bp CATCAGCTTCTCCTTTCAGCACCAGGGCGATGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCAAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: HQLLLSAPGRCSPLW*RPRSRSRCLRSSHS
Trigger: GGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGAAAGGAGAAGCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231751.9
ENST00000426532.6
ENST00000443496.5
CDS CCA 90 bp TGGCATCAGCTTCTCCTTTCAGCACCAGGGCGATGCAGTCCTCTGTaGTGGAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: WHQLLLSAPGRCSPL*WRPRSRSRCLRSSH
Trigger: GTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGAAAGGAGAAGCTGATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231751.9
ENST00000426532.6
ENST00000443496.5
CDS GCA 90 bp GGCCCATGGTGCTGCCCTCCTACAAGGTTGCATTCTGGAGGGGACTaGTCCACAGGCTTCACTGTGCTGGAGGCCTCTGTGTCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: GPWCCPPTRLHSGGD*STGFTVLEASVSAV
Trigger: GACAGCAGACACAGAGGCCTCCAGCACAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCACCATGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS CCA 90 bp TCATGGCATCAGCTTCTCCTTTCAGGGCGATGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCAAGCCACTCC +
Preference number: 5 (lower is better)
Translates to: SWHQLLLSGRCSPLW*RPRSRSRCLRSSHS
Trigger: GGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGAAAGGAGAAGCTGATGCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417439.5
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCAGGAGCCCGTCTGGTaGAAGAGCAGGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKQEPVW*KSRPMG
Trigger: CCCCATGGGCCTGCTCTTCAACCAGACGGGCTCCTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS GCA 90 bp GCCTGGACACCCACGGGGAGCAGGGCAGGAATTCCACAGGGCAACTaGCACCCTTTCCTCAGGAAGGACAAGGGTTGCAATGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: AWTPTGSRAGIPQGN*HPFLRKDKGCNGTL
Trigger: CAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCCCTGTGGAATTCCTGCCCTGCTCCCCGTGGGTGTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS GCA 90 bp GATCACCCTGAGTTGCTGGCCCATGGTGCTGCCCTCCTACAAGGTTaGATTCTGGAGGGGACTGCTCCACAGGCTTCACTGTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: DHPELLAHGAALLQG*ILEGTAPQASLCWR
Trigger: CCTCCAGCACAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCACCATGGGCCAGCAACTCAGGGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS GCA 90 bp AGCCAGGCACCCACGGGGAGCAGGGCAGGAATTCCACAGGGCAACTaGCACCCTTTCCTCAGGAAGGACAAGGGTTGCAATGGCACTTTG +
Preference number: 5 (lower is better)
Translates to: SQAPTGSRAGIPQGN*HPFLRKDKGCNGTL
Trigger: CAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCCCTGTGGAATTCCTGCCCTGCTCCCCGTGGGTGCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478874.2
CDS CCA 90 bp CTGAGTTGCTGGCCCATGGTGCTGCCCTCCTACAAGGTTGCATTCTaGAGGGGACTGCTCCACAGGCTTCACTGTGCTGGAGGCCTCTGT +
Preference number: 5 (lower is better)
Translates to: LSCWPMVLPSYKVAF*RGLLHRLHCAGGLC
Trigger: ACAGAGGCCTCCAGCACAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCACCATGGGCCAGCAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCTCCACTGGTTACACTaGCGCAGCTCCTGCTCGCCC +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLHWLH*RSSCSP
Trigger: GGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS TCA 90 bp CATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCTGGTTGCCTG +
Preference number: 5 (lower is better)
Translates to: HWKHFVASGWDTAHH*TLLLRPARHSPGCL
Trigger: CAGGCAACCAGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431944.1
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTTTGTGGCCTCGGGTaGGGATACGGCGCACCACTG +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFCGLG*GYGAPL
Trigger: CAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTCACAGGCTTCCGTTaGCCATCGAGGCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKVTGFR*PSRHSS
Trigger: GCTGCTGTGCCTCGATGGCAAACGGAAGCCTGTGAC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS CCA 90 bp GACACAGGTTGGGGAACTGTCCTTTATCTGCACCGGGAACACAGCTaGCTGAGAAGAACCTGGCCACAGCTGCCTCAATGGGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: DTGWGTVLYLHREHS*LRRTWPQLPQWAQV
Trigger: CACCTGAGCCCATTGAGGCAGCTGTGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCCGGTGCAGATAAAGGACAGTTCCCCAACCTGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000462667.1
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGATGGCTGAGGCTTTCTaGGGGAGCTGGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKMAEAF*GSWAIF
Trigger: GAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCAT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS TCA 90 bp CATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCCAACTTCTGT +
Preference number: 5 (lower is better)
Translates to: HWKHFVASGWDTAHH*TLLLRPARHSPNFC
Trigger: ACAGAAGTTGGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS TCA 90 bp ACCTGTTTCAGGCGTTCCACCTTATCCATCCGAGACACCACGGCATaGTTCGGGGCCATGGCAAGATGGCAGCTTCTAGCCTCAGTCACA +
Preference number: 5 (lower is better)
Translates to: TCFRRSTLSIRDTTA*FGAMARWQLLASVT
Trigger: TGTGACTGAGGCTAGAAGCTGCCATCTTGCCATGGCCCCGAATCATGCCGTGGTGTCTCGGATGGATAAGGTGGAACGCCTGAAACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000478874.2
ENST00000493056.5
CDS TCA 90 bp CATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCCATTCATTCA +
Preference number: 5 (lower is better)
Translates to: HWKHFVASGWDTAHH*TLLLRPARHSPIHS
Trigger: TGAATGAATGGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCCATTGGAAGCATTTaGTGGCCTCGGGTTGGGATA +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRAIGSI*WPRVGI
Trigger: TATCCCAACCCGAGGCCACAAAATGCTTCCAATGGC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGACTGGCTTCCGAGTGTaGTCTGGGCAGAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRTGFRV*SGQSNS
Trigger: TGAGTTACTCTGCCCAGACAACACTCGGAAGCCAGT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTGGCAGTCTTTGAACTaGTCCACTGGCTTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRWQSLN*STGFRV
Trigger: CACTCGGAAGCCAGTGGACAAGTTCAAAGACTGCCA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCCAGATGGCAGTCTTaGAACTTGTCCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRARWQS*NLSTGF
Trigger: GAAGCCAGTGGACAAGTTCAAAGACTGCCATCTGGC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCAGATGGCAGTCTTaGAACTTGTCCACTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKARWQS*NLSTGF
Trigger: GAAGCCAGTGGACAAGTTCAAAGACTGCCATCTGGC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCAGGAAGGACAAGGGTaGCAATGGCACTTTGGGGTA +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKQEGQG*QWHFGV
Trigger: TACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS CCA 90 bp CACTCCTCCTACGGCCAGCCAGACACAGTCCCATTCATTCAACACTaGTCTATGGGACATCTCCAACGTGCCAGGAGTTGGGTCAGATCT +
Preference number: 5 (lower is better)
Translates to: HSSYGQPDTVPFIQH*SMGHLQRARSWVRS
Trigger: AGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAATGGGACTGTGTCTGGCTGGCCGTAGGAGGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCAGGACTTCAGACCTaGCAGTTCGTTCAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKAGLQT*QFVQLK
Trigger: TTTCAGCTGAACGAACTGCAAGGTCTGAAGTCCTGC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCCAATGGCAGAGTCCTaGAACAGCAGATCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKPMAES*NSRSFC
Trigger: GCAGAAAGATCTGCTGTTCAAGGACTCTGCCATTGG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS TCA 90 bp GAGGACTGGAGGACGCATTGCCAAGCACCTAGGCATGGGTGTCTATaGGGGGAAGAGAAAGGCAGTAGGCACAGGAGGTTTGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: EDWRTHCQAPRHGCL*GEEKGSRHRRFEEN
Trigger: GTTTTCTTCAAACCTCCTGTGCCTACTGCCTTTCTCTTCCCCTCATAGACACCCATGCCTAGGTGCTTGGCAATGCGTCCTCCAGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462667.1
CDS GCA 90 bp ATTCCACAGGGCAACTGCCACCCTTTCCTCAGGAAGGACAAGGGTTaGAATGGCACTTTGGGGTACAAGCCACCATCCCAATTGACTGCA +
Preference number: 5 (lower is better)
Translates to: IPQGNCHPFLRKDKG*NGTLGYKPPSQLTA
Trigger: TGCAGTCAATTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCCCTGTGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CCA 90 bp ACAGGGCAACTGCCACCCTTTCCTCAGGAAGGACAAGGGTTGCAATaGCACTTTGGGGTACAAGCCACCATCCCAATTGACTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: TGQLPPFPQEGQGLQ*HFGVQATIPIDCRI
Trigger: AATCCTGCAGTCAATTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CCA 90 bp GCTGGGGGAATGAGCCTTCTTCCATTCCTTCTACTCATTAAATTCTaGATCAAGTCAGACCACAGCCCAGGGCCCCAGCTGGAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: AGGMSLLPFLLLIKF*IKSDHSPGPQLEFQ
Trigger: CTGGAACTCCAGCTGGGGCCCTGGGCTGTGGTCTGACTTGATCCAGAATTTAATGAGTAGAAGGAATGGAAGAAGGCTCATTCCCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS CCA 90 bp CCTACGGCCAGCCAGACACAGTCCCATTCATTCAACACTGGTCTATaGGACATCTCCAACGTGCCAGGAGTTGGGTCAGATCTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: PTASQTQSHSFNTGL*DISNVPGVGSDLKE
Trigger: CTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAATGGGACTGTGTCTGGCTGGCCGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGCACCAAACCACATTaGCCTGCAGTGTACACATAT +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKGTKPH*PAVYTY
Trigger: ATATGTGTACACTGCAGGCAAATGTGGTTTGGTGCC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGGGCACCAAACCACATTaGCCTGCAGTGTACACATAT +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRGTKPH*PAVYTY
Trigger: ATATGTGTACACTGCAGGCAAATGTGGTTTGGTGCC...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGAGGGTCACTGCTTTGTaGGGATTTGTAGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRRVTAL*GFVVLC
Trigger: GCAGAGAACTACAAATCCCAACAAAGCAGTGACCCT...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTATCTCTCGTTGCTGTaGGGCACGCACTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRYLSLL*GTHLFS
Trigger: TGAGAATAAGTGCGTGCCCAACAGCAACGAGAGATA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGCCCAAATTTAGCCTGTaGGTGGAGCAACACCTGTTT +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKPKFSL*VEQHLF
Trigger: AAACAGGTGTTGCTCCACCAACAGGCTAAATTTGGG...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTGGAATAAGCAAAACTaGTCCGGGCAGTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRWNKQN*SGQSDP
Trigger: TGGATCTGACTGCCCGGACAAGTTTTGCTTATTCCA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAATGGCTGAGGCTTTCTaGGGGAGCTGGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: QERGGAGPEKLGREGPTVMAEAF*GSWAIF
Trigger: GAAGATGGCCCAGCTCCCCAAGAAAGCCTCAGCCAT...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS GCA 90 bp TTTATGCAGCTGACAGGAGGGCCACGCACTTTTCTCATATTCCTTTaGCATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCAC +
Preference number: 5 (lower is better)
Translates to: FMQLTGGPRTFLIFL*HWKHFVASGWDTAH
Trigger: GTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTCCTGTCAGCTGCATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS GCA 90 bp GTCAGATCTCAAAGAGCCTGTTTCCAGCTGAGTGGACTTGGGCAATaGACCCTGTTCATGGTCTCACAGCCAGTGGACAGTAGAGCTAGA +
Preference number: 5 (lower is better)
Translates to: VRSQRACFQLSGLGQ*TLFMVSQPVDSRAR
Trigger: TCTAGCTCTACTGTCCACTGGCTGTGAGACCATGAACAGGGTGCATTGCCCAAGTCCACTCAGCTGGAAACAGGCTCTTTGAGATCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS CCA 90 bp TTCATTCAACACTGGTCTATGGGACATCTCCAACGTGCCAGGAGTTaGGTCAGATCTCAAAGAGCCAGGGCTGGGGGAATGAGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: FIQHWSMGHLQRARS*VRSQRARAGGMSLL
Trigger: AAGAAGGCTCATTCCCCCAGCCCTGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498301.1
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCATATTCCTTTGCCATaGGAAGCATTTTGTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRHIPLP*EAFCGL
Trigger: GAGGCCACAAAATGCTTCCAATGGCAAAGGAATATG...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAAAACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCCCCAAATTTAGCCTGTaGGTGGAGCAACACCTGTTT +
Preference number: 5 (lower is better)
Translates to: GKPVLGLALNSRPLGIIPPKFSL*VEQHLF
Trigger: AAACAGGTGTTGCTCCACCAACAGGCTAAATTTGGG...GGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGTTTTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGCCAGACACTCAGTGTaGTCATTGAACAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKARHSV*SLNRRF
Trigger: AAACCTTCTGTTCAATGACAACACTGAGTGTCTGGC...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTAAATTCCAGACCCTaGGGCATCATACCCAAGACT +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKLNSRP*GIIPKT
Trigger: AGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS TCA 90 bp CAATGGCCTGGATACACTGGATGGGGGAGTCTCTCTTTATGCAGCTaGCAGGAGGGCCACGCACTTTTCTCATATTCCTTTGCCATTGGA +
Preference number: 5 (lower is better)
Translates to: QWPGYTGWGSLSLCS*QEGHALFSYSFAIG
Trigger: TCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTCCTGTCAGCTGCATAAAGAGAGACTCCCCCATCCAGTGTATCCAGGCCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS CCA 90 bp TTCATTCAACACTGGTCTATGGGACATCTCCAACGTGCCAGGAGTTaGGTCAGATCTCAAAGAGCCTGTTTCCAGCTGAGTGGACTTGGG +
Preference number: 5 (lower is better)
Translates to: FIQHWSMGHLQRARS*VRSQRACFQLSGLG
Trigger: CCCAAGTCCACTCAGCTGGAAACAGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS-3UTR CAA 90 bp CTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGCAAGAAAGAGGGCCATTGGAAGCATTTaGTGGCCTCGGGTTGGGATA +
Preference number: 5 (lower is better)
Translates to: LALNSRPLGIIPKTARKRAIGSI*WPRVGI
Trigger: TATCCCAACCCGAGGCCACAAAATGCTTCCAATGGC...CCTCTTTCTTGCAGTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTAACTGGCTTCCGAGTGTaGTCTGGGCAGAGTAACTCA +
Preference number: 5 (lower is better)
Translates to: QERGGAGPEKLGREGPTVTGFRV*SGQSNS
Trigger: TGAGTTACTCTGCCCAGACAACACTCGGAAGCCAGT...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACTGGCAGTCTTTGAACTaGTCCACTGGCTTCCGAGTG +
Preference number: 5 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYWQSLN*STGFRV
Trigger: CACTCGGAAGCCAGTGGACAAGTTCAAAGACTGCCA...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTGGAATTTCGGTGACTaGTCCTTTCCAAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRWNFGD*SFPNFS
Trigger: GGAAAAGTTTGGAAAGGACAAGTCACCGAAATTCCA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGAAATATTCATCAAATTaGCAGGAGCCCGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKKYSSN*QEPVWL
Trigger: CAACCAGACGGGCTCCTGCAAATTTGATGAATATTT...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTAGCCCATGCCTCATaGTTATTTCCATCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRLAHAS*LFPSVF
Trigger: GAACACTGATGGAAATAACAATGAGGCATGGGCTAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGTTTTCATATGTTGTTTaGCCATGGAGTCTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: GNCKQMDGQSPPSAGEAKFSYVV*PWSLAR
Trigger: TCTGGCCAGACTCCATGGCAAAACAACATATGAAAA...CTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS-3UTR CAA 90 bp GGAATTGTAAGCAGATGGATGGGCAATCCCCACCTTCAGCAGGGGAGGCCAAGGTTCTCATTTTACTTCTaGCTAAGACGACAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GIVSRWMGNPHLQQGRPRFSFYF*LRRQQG
Trigger: TCCCTGCTGTCGTCTTAGCAAGAAGTAAAATGAGAA...CCTTGGCCTCCCCTGCTGAAGGTGGGGATTGCCCATCCATCTGCTTACAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000426532.6
CDS GCA 90 bp GGCGGCCTACACAGCAACCAGTCCAAACTGCAGCAGGAAGATGGATaGCTTCTGGAGCAGCACTTCCAAGTAAATGATGAAACTGTGATA +
Preference number: 5 (lower is better)
Translates to: GGLHSNQSKLQQEDG*LLEQHFQVNDETVI
Trigger: TATCACAGTTTCATCATTTACTTGGAAGTGCTGCTCCAGAAGGCATCCATCTTCCTGCTGCAGTTTGGACTGGTTGCTGTGTAGGCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493056.5
CDS-3UTR CAA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACGCAGGACTTCAGACCTaGCAGTTCGTTCAGCTGAAA +
Preference number: 5 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYAGLQT*QFVQLK
Trigger: TTTCAGCTGAACGAACTGCAAGGTCTGAAGTCCTGC...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACTGGAATTTCGGTGACTaGTCCTTTCCAAACTTTTCC +
Preference number: 5 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDWNFGD*SFPNFS
Trigger: GGAAAAGTTTGGAAAGGACAAGTCACCGAAATTCCA...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp AAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTACCCAATGGCAGAGTCCTaGAACAGCAGATCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KKEEGLDLKNLEGKVQLYPMAES*NSRSFC
Trigger: GCAGAAAGATCTGCTGTTCAAGGACTCTGCCATTGG...GTACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAACAGGAGCCCGTCTGGTaGAAGAGCAGGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: REGPTVQVFCQACDFSIKQEPVW*KSRPMG
Trigger: CCCCATGGGCCTGCTCTTCAACCAGACGGGCTCCTG...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp ACCGGTGCTTGGCCTGGCCTTAAATTCCAGACCCTTGGGCATCATACCCAAGACAAATATTCATCAAATTaGCAGGAGCCCGTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TGAWPGLKFQTLGHHTQDKYSSN*QEPVWL
Trigger: CAACCAGACGGGCTCCTGCAAATTTGATGAATATTT...GTCTTGGGTATGATGCCCAAGGGTCTGGAATTTAAGGCCAGGCCAAGCACCGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS TCA 90 bp GTGCCAGGAGTTGGGTCAGATCTCAAAGAGCCAGGGCTGGGGGAATaGGCCTTCTTCCATTCCTTCTACTCATTAAATTCTGGATCAAGT +
Preference number: 5 (lower is better)
Translates to: VPGVGSDLKEPGLGE*AFFHSFYSLNSGSS
Trigger: ACTTGATCCAGAATTTAATGAGTAGAAGGAATGGAAGAAGGCTCATTCCCCCAGCCCTGGCTCTTTGAGATCTGACCCAACTCCTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498301.1
CDS-3UTR CAA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAATTTTGTGGCCTCGGGTaGGGATACGGCGCACCACTG +
Preference number: 5 (lower is better)
Translates to: REGPTVQVFCQACDFSIKFCGLG*GYGAPL
Trigger: CAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAA...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp AGGGAAGGTCCAACTGTACAGGTATTTTGTCAGGCATGTGATTTCAGTATAAAAGTCACAGGCTTCCGTTaGCCATCGAGGCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: REGPTVQVFCQACDFSIKVTGFR*PSRHSS
Trigger: GCTGCTGTGCCTCGATGGCAAACGGAAGCCTGTGAC...TTTTATACTGAAATCACATGCCTGACAAAATACCTGTACAGTTGGACCTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTATTAGCCCATGCCTCATaGTTATTTCCATCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: QERGGAGPEKLGREGPTVLAHAS*LFPSVF
Trigger: GAACACTGATGGAAATAACAATGAGGCATGGGCTAA...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp CAAGAAAGAGGAGGGGCTGGACCTGAAAAACTTGGAAGGGAAGGTCCAACTGTATTTTCATATGTTGTTTaGCCATGGAGTCTGGCCAGA +
Preference number: 5 (lower is better)
Translates to: QERGGAGPEKLGREGPTVFSYVV*PWSLAR
Trigger: TCTGGCCAGACTCCATGGCAAAACAACATATGAAAA...TACAGTTGGACCTTCCCTTCCAAGTTTTTCAGGTCCAGCCCCTCCTCTTTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCTATCTCTCGTTGCTGTaGGGCACGCACTTATTCTCA +
Preference number: 5 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCYLSLL*GTHLFS
Trigger: TGAGAATAAGTGCGTGCCCAACAGCAACGAGAGATA...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCTGGAATAAGCAAAACTaGTCCGGGCAGTCAGATCCA +
Preference number: 5 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCWNKQN*SGQSDP
Trigger: TGGATCTGACTGCCCGGACAAGTTTTGCTTATTCCA...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTAGGGTCACTGCTTTGTaGGGATTTGTAGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: DSASDEQLNLHFSYNSYARVTAL*GFVVLC
Trigger: GCAGAGAACTACAAATCCCAACAAAGCAGTGACCCT...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GACTCTGCAAGTGATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTGCCAGACACTCAGTGTaGTCATTGAACAGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: DSASDEQLNLHFSYNSYAARHSV*SLNRRF
Trigger: AAACCTTCTGTTCAATGACAACACTGAGTGTCTGGC...AGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATCACTTGCAGAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS-3UTR CAA 90 bp GATGAGCAACTGAACCTACATTTCAGTTATAATTCCTATGCTTGCTCTTCCTGCTTCTCATTTTACTTCTaGCTAAGACGACAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: DEQLNLHFSYNSYACSSCFSFYF*LRRQQG
Trigger: TCCCTGCTGTCGTCTTAGCAAGAAGTAAAATGAGAA...GCAGGAAGAGCAAGCATAGGAATTATAACTGAAATGTAGGTTCAGTTGCTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231751.9
CDS GCA 72 bp GGCTGCTGGAGGGCCCCCACGCTTTGTTCCCCTCAGTaGCCGCTGTGCTCACTCAGGCCAGCTGTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: GCWRAPTLCSPQ*PLCSLRPAVKA
Trigger: GGCCTTCACAGCTGGCCTGAGTGAGCACAGCGGGCACTGAGGGGAACAAAGCGTGGGGGCCCTCCAGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS GCA 72 bp CTCAAGCCACTCCACTGGTTACACTTGCGCAGCTCCTaGTCGCCCACCGCACACCACACGACCCGCGCACGC +
Preference number: 6 (lower is better)
Translates to: LKPLHWLHLRSS*SPTAHHTTRAR
Trigger: GCGTGCGCGGGTCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CAA 90 bp GAGCAGGTCACGCTGCCTTCGCTCAAGCCACTCCACTGGTTACACTaGCGCAGCTCCTGCTCGCCCACCGCACACCACACGACCCGCGCA +
Preference number: 6 (lower is better)
Translates to: EQVTLPSLKPLHWLH*RSSCSPTAHHTTRA
Trigger: TGCGCGGGTCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS GCA 72 bp CGCTGCCTTCGCTCAAGCCACTCCACTGGTTACACTTaGGCAGCTCCTGCTCGCCCACCGCACACCACACGA +
Preference number: 6 (lower is better)
Translates to: RCLRSSHSTGYT*AAPARPPHTTR
Trigger: TCGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp GAGCAGGTCACGCTGCCTTCGCTCAAGCCACTCCACTaGTTACACTTGCGCAGCTCCTGCTCGCCCACCGCA +
Preference number: 6 (lower is better)
Translates to: EQVTLPSLKPLH*LHLRSSCSPTA
Trigger: TGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp CTCCTTTCAGCACCAGGGCGATGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: LLSAPGRCSPLW*RPRSRSRCLRS
Trigger: TGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGAAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231751.9
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp CTTCTCCTTTCAGCACCAGGGCGATGCAGTCCTCTGTaGTGGAGGCCGAGGAGCAGGTCACGCTGCCTTCGC +
Preference number: 6 (lower is better)
Translates to: LLLSAPGRCSPL*WRPRSRSRCLR
Trigger: GCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGGTGCTGAAAGGAGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231751.9
ENST00000426532.6
ENST00000443496.5
CDS CAA 72 bp ACGCTGCCTTCGCTCAAGCCACTCCACTGGTTACACTaGCGCAGCTCCTGCTCGCCCACCGCACACCACACG +
Preference number: 6 (lower is better)
Translates to: TLPSLKPLHWLH*RSSCSPTAHHT
Trigger: CGTGTGGTGTGCGGTGGGCGAGCAGGAGCTGCGCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp CAGCTTCTCCTTTCAGGGCGATGCAGTCCTCTGTGGTaGAGGCCGAGGAGCAGGTCACGCTGCCTTCGCTCA +
Preference number: 6 (lower is better)
Translates to: QLLLSGRCSPLW*RPRSRSRCLRS
Trigger: TGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACTGCATCGCCCTGAAAGGAGAAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417439.5
CDS CCA 72 bp ACGGCCAGCCAGACACAGTCCCAACTTCTGTCAGCCTaGACACCCACGGGGAGCAGGGCAGGAATTCCACAG +
Preference number: 6 (lower is better)
Translates to: TASQTQSQLLSA*TPTGSRAGIPQ
Trigger: CTGTGGAATTCCTGCCCTGCTCCCCGTGGGTGTCCAGGCTGACAGAAGTTGGGACTGTGTCTGGCTGGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426532.6
CDS TCA 72 bp CATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCG +
Preference number: 6 (lower is better)
Translates to: HFVASGWDTAHH*TLLLRPARHSP
Trigger: CGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231751.9
ENST00000417439.5
CDS TCA 72 bp CATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCC +
Preference number: 6 (lower is better)
Translates to: HFVASGWDTAHH*TLLLRPARHSP
Trigger: GGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426532.6
ENST00000443496.5
ENST00000498301.1
CDS GCA 72 bp AGTCCTCTGTGGTGGAGGCCGAGGAGCAGGTCACGCTaGCTTCGCTCAAGCCACTCCACTGGTTACACTTGC +
Preference number: 6 (lower is better)
Translates to: SPLWWRPRSRSR*LRSSHSTGYTC
Trigger: GCAAGTGTAACCAGTGGAGTGGCTTGAGCGAAGGCAGCGTGACCTGCTCCTCGGCCTCCACCACAGAGGACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS TCA 72 bp CATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTaGACACTCCTCCTACGGCCAGCCAGACACAGTCCT +
Preference number: 6 (lower is better)
Translates to: HFVASGWDTAHH*TLLLRPARHSP
Trigger: AGGACTGTGTCTGGCTGGCCGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431944.1
CDS GCA 72 bp TGCTGCCCTCCTACAAGGTTGCATTCTGGAGGGGACTaGTCCACAGGCTTCACTGTGCTGGAGGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: CCPPTRLHSGGD*STGFTVLEASV
Trigger: CACAGAGGCCTCCAGCACAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS GCA 72 bp GAGTTGCTGGCCCATGGTGCTGCCCTCCTACAAGGTTaGATTCTGGAGGGGACTGCTCCACAGGCTTCACTG +
Preference number: 6 (lower is better)
Translates to: ELLAHGAALLQG*ILEGTAPQASL
Trigger: CAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCACCATGGGCCAGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS CCA 72 bp TGGCCCATGGTGCTGCCCTCCTACAAGGTTGCATTCTaGAGGGGACTGCTCCACAGGCTTCACTGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: WPMVLPSYKVAF*RGLLHRLHCAG
Trigger: TCCAGCACAGTGAAGCCTGTGGAGCAGTCCCCTCCAGAATGCAACCTTGTAGGAGGGCAGCACCATGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS TCA 72 bp AGGCGTTCCACCTTATCCATCCGAGACACCACGGCATaGTTCGGGGCCATGGCAAGATGGCAGCTTCTAGCC +
Preference number: 6 (lower is better)
Translates to: RRSTLSIRDTTA*FGAMARWQLLA
Trigger: GGCTAGAAGCTGCCATCTTGCCATGGCCCCGAATCATGCCGTGGTGTCTCGGATGGATAAGGTGGAACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000478874.2
ENST00000493056.5
CDS CAA 90 bp GCCATGGCAAGATGGCAGCTTCTAGCCTCAGTCACAGGCTTCCGTTaGCCATCGAGGCACAGCAGCGCAAAGTCTGCCAGCTTCAAATCC +
Preference number: 6 (lower is better)
Translates to: AMARWQLLASVTGFR*PSRHSSAKSASFKS
Trigger: GGATTTGAAGCTGGCAGACTTTGCGCTGCTGTGCCTCGATGGCAAACGGAAGCCTGTGACTGAGGCTAGAAGCTGCCATCTTGCCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000478874.2
ENST00000493056.5
CDS GCA 72 bp GATGTGCAGGCGGCCTACACAGCAACCAGTCCAAACTaGAGCAGGAAGATGGATGCCTTCTGGAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: DVQAAYTATSPN*SRKMDAFWSST
Trigger: AGTGCTGCTCCAGAAGGCATCCATCTTCCTGCTGCAGTTTGGACTGGTTGCTGTGTAGGCCGCCTGCACATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493056.5
CDS CCA 72 bp GAAGAACCTGGCCACAGCTGCCTCAATGGGCTCAGGTaGACCCGTCCAATTCAAGAATGGACGAAGTGTCCC +
Preference number: 6 (lower is better)
Translates to: EEPGHSCLNGLR*TRPIQEWTKCP
Trigger: GGGACACTTCGTCCATTCTTGAATTGGACGGGTCCACCTGAGCCCATTGAGGCAGCTGTGGCCAGGTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp TGGGGAACTGTCCTTTATCTGCACCGGGAACACAGCTaGCTGAGAAGAACCTGGCCACAGCTGCCTCAATGG +
Preference number: 6 (lower is better)
Translates to: WGTVLYLHREHS*LRRTWPQLPQW
Trigger: CCATTGAGGCAGCTGTGGCCAGGTTCTTCTCAGCCAGCTGTGTTCCCGGTGCAGATAAAGGACAGTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000462667.1
CDS CAA 90 bp GCAGCTGACAGGAGGGCCACGCACTTTTCTCATATTCCTTTGCCATaGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCACCACTG +
Preference number: 6 (lower is better)
Translates to: AADRRATHFSHIPLP*EAFCGLGLGYGAPL
Trigger: CAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTCCTGTCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS GCA 72 bp GTGCCTGGCGGAGAAGATTCCAGATGGCATCCTCCTTaGCATTCACACTTCGTGCCACAACGGCATGAGAAG +
Preference number: 6 (lower is better)
Translates to: VPGGEDSRWHPP*HSHFVPQRHEK
Trigger: CTTCTCATGCCGTTGTGGCACGAAGTGTGAATGGCAAGGAGGATGCCATCTGGAATCTTCTCCGCCAGGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS GCA 72 bp GGCAACTGCCACCCTTTCCTCAGGAAGGACAAGGGTTaGAATGGCACTTTGGGGTACAAGCCACCATCCCAA +
Preference number: 6 (lower is better)
Translates to: GNCHPFLRKDKG*NGTLGYKPPSQ
Trigger: TTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CCA 72 bp GCATCGGCCCTGTTTTCCGCAATGGCCTGGATACACTaGATGGGGGAGTCTCTCTTTATGCAGCTGACAGGA +
Preference number: 6 (lower is better)
Translates to: ASALFSAMAWIH*MGESLFMQLTG
Trigger: TCCTGTCAGCTGCATAAAGAGAGACTCCCCCATCCAGTGTATCCAGGCCATTGCGGAAAACAGGGCCGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
CDS CCA 72 bp TTGGGCAATGCACCCTGTTCATGGTCTCACAGCCAGTaGACAGTAGAGCTAGAAATCCACCCGGGACCCCAT +
Preference number: 6 (lower is better)
Translates to: LGNAPCSWSHSQ*TVELEIHPGPH
Trigger: ATGGGGTCCCGGGTGGATTTCTAGCTCTACTGTCCACTGGCTGTGAGACCATGAACAGGGTGCATTGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS CAA 72 bp ACACTGGTCTATGGGACATCTCCAACGTGCCAGGAGTaGGGTCAGATCTCAAAGAGCCAGGGCTGGGGGAAT +
Preference number: 6 (lower is better)
Translates to: TLVYGTSPTCQE*GQISKSQGWGN
Trigger: ATTCCCCCAGCCCTGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498301.1
CDS CAA 90 bp GAGGGCCACGCACTTTTCTCATATTCCTTTGCCATTGGAAGCATTTaGTGGCCTCGGGTTGGGATACGGCGCACCACTGAACACTCCTCC +
Preference number: 6 (lower is better)
Translates to: EGHALFSYSFAIGSI*WPRVGIRRTTEHSS
Trigger: GGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS CAA 90 bp CGGGCCAGATGGCAGTCTTTGAACTTGTCCACTGGCTTCCGAGTGTaGTCTGGGCAGAGTAACTCATACTCGTCCCTTTCAGCCTCGTCT +
Preference number: 6 (lower is better)
Translates to: RARWQSLNLSTGFRV*SGQSNSYSSLSASS
Trigger: AGACGAGGCTGAAAGGGACGAGTATGAGTTACTCTGCCCAGACAACACTCGGAAGCCAGTGGACAAGTTCAAAGACTGCCATCTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS TCA 72 bp AGGACGCATTGCCAAGCACCTAGGCATGGGTGTCTATaGGGGGAAGAGAAAGGCAGTAGGCACAGGAGGTTT +
Preference number: 6 (lower is better)
Translates to: RTHCQAPRHGCL*GEEKGSRHRRF
Trigger: AAACCTCCTGTGCCTACTGCCTTTCTCTTCCCCTCATAGACACCCATGCCTAGGTGCTTGGCAATGCGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462667.1
CDS CCA 72 bp TACGGCCAGCCAGACACAGTCCCATTCATTCAACACTaGTCTATGGGACATCTCCAACGTGCCAGGAGTTGG +
Preference number: 6 (lower is better)
Translates to: YGQPDTVPFIQH*SMGHLQRARSW
Trigger: CCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAATGGGACTGTGTCTGGCTGGCCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS CAA 72 bp ATTCCTTTGCCATTGGAAGCATTTTGTGGCCTCGGGTaGGGATACGGCGCACCACTGAACACTCCTCCTACG +
Preference number: 6 (lower is better)
Translates to: IPLPLEAFCGLG*GYGAPLNTPPT
Trigger: CGTAGGAGGAGTGTTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS CAA 90 bp AATTCCACAGGGCAACTGCCACCCTTTCCTCAGGAAGGACAAGGGTaGCAATGGCACTTTGGGGTACAAGCCACCATCCCAATTGACTGC +
Preference number: 6 (lower is better)
Translates to: NSTGQLPPFPQEGQG*QWHFGVQATIPIDC
Trigger: GCAGTCAATTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTTGCCCTGTGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CCA 72 bp CTCAATGGGCTCAGGTGGACCCGTCCAATTCAAGAATaGACGAAGTGTCCCTATAGGGACATTCCATCCAGC +
Preference number: 6 (lower is better)
Translates to: LNGLRWTRPIQE*TKCPYRDIPSS
Trigger: GCTGGATGGAATGTCCCTATAGGGACACTTCGTCCATTCTTGAATTGGACGGGTCCACCTGAGCCCATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
CDS CCA 72 bp CAGATCTCAAAGAGCCTGTTTCCAGCTGAGTGGACTTaGGCAATGCACCCTGTTCATGGTCTCACAGCCAGT +
Preference number: 6 (lower is better)
Translates to: QISKSLFPAEWT*AMHPVHGLTAS
Trigger: ACTGGCTGTGAGACCATGAACAGGGTGCATTGCCCAAGTCCACTCAGCTGGAAACAGGCTCTTTGAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS CCA 72 bp AATCTGTTCTGCATGAGCACATGTGTCTTGGAGGACTaGAGGACGCATTGCCAAGCACCTAGGCATGGGTGT +
Preference number: 6 (lower is better)
Translates to: NLFCMSTCVLED*RTHCQAPRHGC
Trigger: ACACCCATGCCTAGGTGCTTGGCAATGCGTCCTCCAGTCCTCCAAGACACATGTGCTCATGCAGAACAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462667.1
CDS CAA 72 bp CCTTTCCTCAGGAAGGACAAGGGTTGCAATGGCACTTaGGGGTACAAGCCACCATCCCAATTGACTGCAGGA +
Preference number: 6 (lower is better)
Translates to: PFLRKDKGCNGT*GYKPPSQLTAG
Trigger: TCCTGCAGTCAATTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CAA 90 bp CTTTATGCAGCTGACAGGAGGGCCACGCACTTTTCTCATATTCCTTaGCCATTGGAAGCATTTTGTGGCCTCGGGTTGGGATACGGCGCA +
Preference number: 6 (lower is better)
Translates to: LYAADRRATHFSHIP*PLEAFCGLGLGYGA
Trigger: TGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTCCTGTCAGCTGCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS CAA 90 bp ATTCATTCAACACTGGTCTATGGGACATCTCCAACGTGCCAGGAGTaGGGTCAGATCTCAAAGAGCCAGGGCTGGGGGAATGAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: IHSTLVYGTSPTCQE*GQISKSQGWGNEPS
Trigger: AGAAGGCTCATTCCCCCAGCCCTGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498301.1
CDS GCA 72 bp CTGACAGGAGGGCCACGCACTTTTCTCATATTCCTTTaGCATTGGAAGCATTTTGTGGCCTCGGGTTGGGAT +
Preference number: 6 (lower is better)
Translates to: LTGGPRTFLIFL*HWKHFVASGWD
Trigger: ATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGCGTGGCCCTCCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS GCA 72 bp CTCTCGTTGCTGTTGGGCACGCACTTATTCTCACCCTaGTCGTCGCCAATACACAGAGCACAGAGATTAGAT +
Preference number: 6 (lower is better)
Translates to: LSLLLGTHLFSP*SSPIHRAQRLD
Trigger: ATCTAATCTCTGTGCTCTGTGTATTGGCGACGAGCAGGGTGAGAATAAGTGCGTGCCCAACAGCAACGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS CCA 72 bp AGCCAGACACAGTCCCATTCATTCAACACTGGTCTATaGGACATCTCCAACGTGCCAGGAGTTGGGTCAGAT +
Preference number: 6 (lower is better)
Translates to: SQTQSHSFNTGL*DISNVPGVGSD
Trigger: ATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAATGGGACTGTGTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443496.5
ENST00000498301.1
CDS CAA 90 bp AACTGCCACCCTTTCCTCAGGAAGGACAAGGGTTGCAATGGCACTTaGGGGTACAAGCCACCATCCCAATTGACTGCAGGATTCAAACTT +
Preference number: 6 (lower is better)
Translates to: NCHPFLRKDKGCNGT*GYKPPSQLTAGFKL
Trigger: AAGTTTGAATCCTGCAGTCAATTGGGATGGTGGCTTGTACCCCAAAGTGCCATTGCAACCCTTGTCCTTCCTGAGGAAAGGGTGGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426532.6
ENST00000478874.2
CDS CAA 90 bp ATTCATTCAACACTGGTCTATGGGACATCTCCAACGTGCCAGGAGTaGGGTCAGATCTCAAAGAGCCTGTTTCCAGCTGAGTGGACTTGG +
Preference number: 6 (lower is better)
Translates to: IHSTLVYGTSPTCQE*GQISKSLFPAEWTW
Trigger: CCAAGTCCACTCAGCTGGAAACAGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS GCA 72 bp ATCAGTGTTCTGCAAGACAGTGACATCTTTCACAAATaGAACGTCTCCAGCATTCTCAGCCAGGCACCCACG +
Preference number: 6 (lower is better)
Translates to: ISVLQDSDIFHK*NVSSILSQAPT
Trigger: CGTGGGTGCCTGGCTGAGAATGCTGGAGACGTTGCATTTGTGAAAGATGTCACTGTCTTGCAGAACACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478874.2
CDS CAA 72 bp GCACTTTTCTCATATTCCTTTGCCATTGGAAGCATTTaGTGGCCTCGGGTTGGGATACGGCGCACCACTGAA +
Preference number: 6 (lower is better)
Translates to: ALFSYSFAIGSI*WPRVGIRRTTE
Trigger: TTCAGTGGTGCGCCGTATCCCAACCCGAGGCCACAAAATGCTTCCAATGGCAAAGGAATATGAGAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000431944.1
ENST00000443496.5
ENST00000498301.1
CDS GCA 72 bp ATCAGTGTTCTGCAAGACAGTGACATCTTTCACAAATaGAACGTCTCCAGCATTCTCAGCCAGGCACCGGAA +
Preference number: 6 (lower is better)
Translates to: ISVLQDSDIFHK*NVSSILSQAPE
Trigger: TTCCGGTGCCTGGCTGAGAATGCTGGAGACGTTGCATTTGTGAAAGATGTCACTGTCTTGCAGAACACTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
CDS GCA 72 bp CACAGCAACCAGTCCAAACTGCAGCAGGAAGATGGATaGCTTCTGGAGCAGCACTTCCAAGTAAATGATGAA +
Preference number: 6 (lower is better)
Translates to: HSNQSKLQQEDG*LLEQHFQVNDE
Trigger: TTCATCATTTACTTGGAAGTGCTGCTCCAGAAGGCATCCATCTTCCTGCTGCAGTTTGGACTGGTTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493056.5
CDS GCA 72 bp CAGCGCAAAGTCTGCCAGCTTCAAATCCTTAGCCCATaGCTCATTGTTATTTCCATCAGTGTTCTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: QRKVCQLQILSP*LIVISISVLQD
Trigger: GTCTTGCAGAACACTGATGGAAATAACAATGAGGCATGGGCTAAGGATTTGAAGCTGGCAGACTTTGCGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231751.9
ENST00000417439.5
ENST00000426532.6
ENST00000443496.5
ENST00000478874.2
ENST00000493056.5
CDS GCA 72 bp ATTCATTCAACACTGGTCTATGGGACATCTCCAACGTaGCAGGAGTTGGGTCAGATCTCAAAGAGCCTGTTT +
Preference number: 6 (lower is better)
Translates to: IHSTLVYGTSPT*QELGQISKSLF
Trigger: AAACAGGCTCTTTGAGATCTGACCCAACTCCTGGCACGTTGGAGATGTCCCATAGACCAGTGTTGAATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443496.5
CDS GCA 72 bp ATCAGTGTTCTGCAAGACAGTGACATCTTTCACAAATaGAACGTCTCCAGCATTCTCAGCCAGGCACCAAAA +
Preference number: 6 (lower is better)
Translates to: ISVLQDSDIFHK*NVSSILSQAPK
Trigger: TTTTGGTGCCTGGCTGAGAATGCTGGAGACGTTGCATTTGTGAAAGATGTCACTGTCTTGCAGAACACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493056.5
CDS GCA 72 bp TCAGAGCTGTGCCCTGTAGGAATCTTGAAAATGGTCTaGCATGAACTTAGGAATCTAATTAGCTCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: SELCPVGILKMV*HELRNLISSKV
Trigger: GACCTTTGAGCTAATTAGATTCCTAAGTTCATGGCAGACCATTTTCAAGATTCCTACAGGGCACAGCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462667.1
CDS CAA 72 bp AAGATCATAAAATCAGAGCTGTGCCCTGTAGGAATCTaGAAAATGGTCTGCCATGAACTTAGGAATCTAATT +
Preference number: 6 (lower is better)
Translates to: KIIKSELCPVGI*KMVCHELRNLI
Trigger: AATTAGATTCCTAAGTTCATGGCAGACCATTTTCAAGATTCCTACAGGGCACAGCTCTGATTTTATGATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462667.1