RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTBR (Homo sapiens)

Ensembl gene IDs: ENSG00000111321

Ensembl transcript IDs: ENST00000228918.9, ENST00000440421.2, ENST00000441074.3, ENST00000444814.2, ENST00000535739.5, ENST00000536876.5, ENST00000539925.5, ENST00000541005.1, ENST00000541102.1, ENST00000542830.5, ENST00000543190.5, ENST00000543542.1, ENST00000544454.5, ENST00000545445.1, ENST00000546296.5

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTaGCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTAT +
Preference number: 1 (lower is better)
Translates to: GPVTSLQVTVWRLPR*RAPVRRAVVGSSWY
Trigger: ATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR GCA 90 bp GGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCGGTGCGGCGTaGCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCT +
Preference number: 1 (lower is better)
Translates to: GDRVAAPSVPCSGAA*RSGQQLVSCALSVP
Trigger: AGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 90 bp CCTCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTaGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: PRCRAPVRRAVVGSS*YHVPCPCLRLSSPR
Trigger: CCTGGGGCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 90 bp ACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTaGCGGCTCCCTCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTG +
Preference number: 1 (lower is better)
Translates to: TNPLEGPVTSLQVTV*RLPRCRAPVRRAVV
Trigger: CACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR GCA 90 bp CGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTaGTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGT +
Preference number: 1 (lower is better)
Translates to: RDVLAGDRVAAPSVP*SGAACRSGQQLVSC
Trigger: ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 90 bp CTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGAGAGTCCTGTaGAGGGCACCGTACCCAGCCAGTGCCCACCTGCTCTCAGAGGTG +
Preference number: 1 (lower is better)
Translates to: LPGGLRFAQAVGRVL*RAPYPASAHLLSEV
Trigger: CACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGTGCCCTCCACAGGACTCTCCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR GCA 90 bp CCCACCTGCTCTCAGAGGTGTCTGAGCCTTAATCCCTTAGGGCTCTaGTTCCCCGGGCCCTACTCAGGCCCCTGTGAATCCCACGTGGGC +
Preference number: 1 (lower is better)
Translates to: PTCSQRCLSLNPLGL*FPGPYSGPCESHVG
Trigger: GCCCACGTGGGATTCACAGGGGCCTGAGTAGGGCCCGGGGAAGCAGAGCCCTAAGGGATTAAGGCTCAGACACCTCTGAGAGCAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000539925.5
ENST00000541102.1
3UTR GCA 90 bp CTAGGAGGGGAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATaGAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGG +
Preference number: 1 (lower is better)
Translates to: LGGEGRSVLPIISSS*RVYLSPREVWNPKG
Trigger: CCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTCCCCTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 90 bp ATAATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTaGAACCCCAAAGGGTCTCTGAAGCTTGGGGATGAGCACCACGAA +
Preference number: 1 (lower is better)
Translates to: IISSSCRVYLSPREV*NPKGSLKLGDEHHE
Trigger: TTCGTGGTGCTCATCCCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR TCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCCTACTCAGGCCCCTGTaGATCCCACGTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSLLRPL*IPRGQG
Trigger: GCCCTGCCCACGTGGGATTCACAGGGGCCTGAGTAG...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CAA 90 bp CCCTCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTaGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: PSVPCSGAACRSGQQ*VSCALSVPEAEQPQ
Trigger: CTGGGGCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR TCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACTACTCAGGCCCCTGTaGATCCCACGTGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVLLRPL*IPRGQG
Trigger: GCCCTGCCCACGTGGGATTCACAGGGGCCTGAGTAG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR-3UTR GCA 90 bp GAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTACCGTACCCAGCCAGTaGCCACCTGCTCTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: EGPVTSLQVTVWRLPRCRTVPSQ*PPALRG
Trigger: ACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGT...ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCAGCCAGTGCCCACCTaGTCTCAGAGGTGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGQPVPT*SQRCLS
Trigger: GCTCAGACACCTCTGAGAGCAGGTGGGCACTGGCTG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGACCGTACCCAGCCAGTaGCCACCTGCTCTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRTVPSQ*PPALRG
Trigger: ACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR CAA 90 bp TTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTaGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCGGTG +
Preference number: 2 (lower is better)
Translates to: LGMSTTNPLEGPVTS*QVTVWRLPRCRAPV
Trigger: CACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAATCCCTTAGGGCTCTaGTTCCCCGGGCCCTACTCA +
Preference number: 2 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSNPLGL*FPGPYS
Trigger: TGAGTAGGGCCCGGGGAAGCAGAGCCCTAAGGGATT...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGAGAAGGTGCCCTTGTaGCCCCCTTCTTCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSREKVPL*PPSSAF
Trigger: AAAGGCAGAAGAAGGGGGGCACAAGGGCACCTTCTC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAAATCCCTTAGGGCTCTaGTTCCCCGGGCCCTACTCA +
Preference number: 2 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVNPLGL*FPGPYS
Trigger: TGAGTAGGGCCCGGGGAAGCAGAGCCCTAAGGGATT...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR-3UTR GCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCTGCTCCGGTGCGGCGTaGCGTAGTGGGCAGCAGTTG +
Preference number: 2 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTCSGAA*RSGQQL
Trigger: CAACTGCTGCCCACTACGGCACGCCGCACCGGAGCA...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR GCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCGGGAGGCCTCAGGTTTaGTCAGGCAGTAGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTGRPQV*SGSRES
Trigger: ACTCTCCCTACTGCCTGAGCAAACCTGAGGCCTCCC...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR GCA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTGAGAAGGTGCCCTTGTaGCCCCCTTCTTCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSEKVPL*PPSSAF
Trigger: AAAGGCAGAAGAAGGGGGGCACAAGGGCACCTTCTC...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR CCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTAGTAGGGAGAGTCCTGTaGAGGGCACCGTACCCAGCC +
Preference number: 2 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLVGRVL*RAPYPA
Trigger: GGCTGGGTACGGTGCCCTCCACAGGACTCTCCCTAC...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR-3UTR CCA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTGTAGTGGGCAGCAGTTaGTATCATGTGCCCTGTCCG +
Preference number: 2 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSVVGSS*YHVPCP
Trigger: CGGACAGGGCACATGATACCAACTGCTGCCCACTAC...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR GCA 72 bp ACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTaGCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGC +
Preference number: 3 (lower is better)
Translates to: TSLQVTVWRLPR*RAPVRRAVVGS
Trigger: GCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR GCA 72 bp CTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTaGTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTG +
Preference number: 3 (lower is better)
Translates to: LAGDRVAAPSVP*SGAACRSGQQL
Trigger: CAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 72 bp CGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTaGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: RAPVRRAVVGSS*YHVPCPCLRLS
Trigger: GCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CCA 72 bp GGCCTCAGGTTTGCTCAGGCAGTAGGGAGAGTCCTGTaGAGGGCACCGTACCCAGCCAGTGCCCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: GLRFAQAVGRVL*RAPYPASAHLL
Trigger: GAGCAGGTGGGCACTGGCTGGGTACGGTGCCCTCCACAGGACTCTCCCTACTGCCTGAGCAAACCTGAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR GCA 72 bp TCCTGTGGAGGGCACCGTACCCAGCCAGTGCCCACCTaGTCTCAGAGGTGTCTGAGCCTTAATCCCTTAGGG +
Preference number: 3 (lower is better)
Translates to: SCGGHRTQPVPT*SQRCLSLNPLG
Trigger: CCCTAAGGGATTAAGGCTCAGACACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGTGCCCTCCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR GCA 72 bp TCTCAGAGGTGTCTGAGCCTTAATCCCTTAGGGCTCTaGTTCCCCGGGCCCTACTCAGGCCCCTGTGAATCC +
Preference number: 3 (lower is better)
Translates to: SQRCLSLNPLGL*FPGPYSGPCES
Trigger: GGATTCACAGGGGCCTGAGTAGGGCCCGGGGAAGCAGAGCCCTAAGGGATTAAGGCTCAGACACCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000539925.5
ENST00000541102.1
3UTR CCA 72 bp TTGAGCAGCGATCCCAGTTTCCTGCAGAGAGAAGGGTaGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGG +
Preference number: 3 (lower is better)
Translates to: LSSDPSFLQREG*LFQMQEKTVAR
Trigger: CCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCAGGAAACTGGGATCGCTGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
3UTR CCA 72 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTaGAACCCCAAAGGGTCTCTGAAGCTTGGGGATGAG +
Preference number: 3 (lower is better)
Translates to: SSCRVYLSPREV*NPKGSLKLGDE
Trigger: CTCATCCCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR TCA 72 bp TCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTaGAGCTTGGGGATGAGCACCACGAATCCTTTAGAG +
Preference number: 3 (lower is better)
Translates to: SVHVKCGTPKGL*SLGMSTTNPLE
Trigger: CTCTAAAGGATTCGTGGTGCTCATCCCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR GCA 72 bp GAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATaGAGGGTCTACCTCAGTCCACGTGAAGTGTGGAAC +
Preference number: 3 (lower is better)
Translates to: EGRSVLPIISSS*RVYLSPREVWN
Trigger: GTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR TCA 72 bp AATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTaGAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGG +
Preference number: 3 (lower is better)
Translates to: NFIFMQGLPQST*SVEPQRVSEAW
Trigger: CCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCGGCACCGCCTGGGGCTaGGATGCTGCCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSGTAWG*DAARSP
Trigger: CGGGCTCCTGGCAGCATCGCAGCCCCAGGCGGTGCC...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCGGCCGGGGGCAGAGGTaGCCCAAGGCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSGRGQR*PKAGAW
Trigger: CCATGCTCCTGCCTTGGGCCACCTCTGCCCCCGGCC...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGCCCCAGGGGGTGGGTaGGTCTGCCGGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSAPGGG*VCREAS
Trigger: TGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGAGCAGCCCCAGGGGGTaGGTGGGTCTGCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRSSPRG*VGLPGG
Trigger: GCCTCCCGGCAGACCCACCCACCCCCTGGGGCTGCT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCCTGGGGCTGCGATGCTaGCAGGAGCCCGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSLGLRC*QEPEEA
Trigger: GGCCTCTTCGGGCTCCTGGCAGCATCGCAGCCCCAG...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATGGCGGCTCCCTCGGTaGCGTGCTCCGGTGCGGCGT +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVWRLPR*RAPVRR
Trigger: ACGCCGCACCGGAGCACGGCACCGAGGGAGCCGCCA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACCCCAGCCAGGCCGCTaGACCTGTCAGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVPQPGR*TCQVRG
Trigger: CCCCCTCACCTGACAGGTGCAGCGGCCTGGCTGGGG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS-3UTR CCA 90 bp GAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTCCCTGCCTCCAAAACTaGGGCTGCGGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EGPVTSLQVTVWRLPRCRPCLQN*GCGEPS
Trigger: ACTGGGCTCCCCGCAGCCCCAGTTTTGGAGGCAGGG...ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGTACCGTGGGCCACCTaGCTCTGCTCCCCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSVPWAT*LCSPGS
Trigger: GGAACCCGGGGAGCAGAGCCAGGTGGCCCACGGTAC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATGTCGCTTCCATCCCTaGCCGGCCAGCGGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVCRFHP*PASGRA
Trigger: AGCCCGCCCGCTGGCCGGCCAGGGATGGAAGCGACA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS-3UTR TCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCTACTCAGGCCCCTGTaGATCCCACGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRLLRPL*IPRGQG
Trigger: GCCCTGCCCACGTGGGATTCACAGGGGCCTGAGTAG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGTCCCCGGGTTCCAACTaGGGCTCCCTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGSPGSN*GSLVRS
Trigger: GGACCTGACCAGGGAGCCGCAGTTGGAACCCGGGGA...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGTGGGCCACCTGGCTCTaGTCCCCGGGTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGWATWL*SPGSNC
Trigger: GCAGTTGGAACCCGGGGAGCAGAGCCAGGTGGCCCA...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTGCTCCGGTGCGGCGTaGCGTAGTGGGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSCSGAA*RSGQQL
Trigger: CAACTGCTGCCCACTACGGCACGCCGCACCGGAGCA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGCTGGCAGCGGGCGCTaGGGGAGGAGGTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGAGSGR*GRRYSG
Trigger: TCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCAGC...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCCTTGGTTCTCACACCTaGTGTGGGGCTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSLGSHT*CGAGSG
Trigger: CCCGCTGCCAGCCCCACACCAGGTGTGAGAACCAAG...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTCCCTGCCTCCAAAACTaGGGCTGCGGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSPCLQN*GCGEPS
Trigger: ACTGGGCTCCCCGCAGCCCCAGTTTTGGAGGCAGGG...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGAGGTTCGGGGGTAGCTaGGAGGTCTCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRRFGGS*EVSRTR
Trigger: CCGGGTCCTGGAGACCTCCCAGCTACCCCCGAACCT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR TCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTCCTGCGGACGCCTCTTaGGCAGCGATCCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSPADAS*AAIPVS
Trigger: GGAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGG...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGAAGTGCCCGGCCTTaGAGGGGACGCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRGSARP*RGRSGC
Trigger: ACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTTGGGTCCCTCTCCCTaGGGACGCCTCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSLGPSP*GRLLSS
Trigger: GCTGCTCAAGAGGCGTCCGCAGGGAGAGGGACCCAA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGTTGGGTCCCTCTCCCTaGGGACGCCTCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGLGPSP*GRLLSS
Trigger: GCTGCTCAAGAGGCGTCCGCAGGGAGAGGGACCCAA...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGAGGTCCAGAGGACTCTaGTGTTGCGGCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGRSRGL*CCGTPA
Trigger: GGCAGGGGTGCCGCAACAGCAGAGTCCTCTGGACCT...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATGGGCCACCTGGCTCTaGTCCCCGGGTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVWATWL*SPGSNC
Trigger: GCAGTTGGAACCCGGGGAGCAGAGCCAGGTGGCCCA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACTCGAGGCCCATCACTaGGTCACAGGGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVLEAHH*VTGAAQ
Trigger: CTGTGCCGCCCCTGTGACCCAGTGATGGGCCTCGAG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGCTGGCAGCGGGCGCTaGGGGAGGAGGTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVAGSGR*GRRYSG
Trigger: TCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCAGC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCTTGGTTCTCACACCTaGTGTGGGGCTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRLGSHT*CGAGSG
Trigger: CCCGCTGCCAGCCCCACACCAGGTGTGAGAACCAAG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCAGGTTGTGTCGGACTaGGCAGTGCCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRQVVSD*AVPGAA
Trigger: GGCAGCTCCAGGCACTGCCCAGTCCGACACAACCTG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTATGCCATTGGTACCGTaGGCCACCTGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EGPVTSLQVTVWRLPRCRMPLVP*ATWLCS
Trigger: GGAGCAGAGCCAGGTGGCCCACGGTACCAATGGCAT...ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGACCCGCCGGTGACATaGATGCCATTGGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRDPPVT*MPLVPW
Trigger: CCACGGTACCAATGGCATTCATGTCACCGGCGGGTC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR TCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCACCCCAAAGGGTCTCTaGAGCTTGGGGATGAGCACC +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSTPKGL*SLGMST
Trigger: GGTGCTCATCCCCAAGCTTCAGAGACCCTTTGGGGT...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGAAGTGCCCGGCCTTaGAGGGGACGCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVGSARP*RGRSGC
Trigger: ACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGAGGTATTCTGGAAGTaGCCGGCCTTGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSREVFWK*PALQGT
Trigger: CGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGCAGTGCCTGGAGCTaGCTCCACCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGGSAWS*LHQTLV
Trigger: AACCAAGGTCTGGTGGAGGCAGCTCCAGGCACTGCC...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGGCAGTGCCTGGAGCTaGCTCCACCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSGSAWS*LHQTLV
Trigger: AACCAAGGTCTGGTGGAGGCAGCTCCAGGCACTGCC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGTGTGGCACCACAGTaGTCTGTCTCCGCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRGVAPQ*SVSARC
Trigger: GCACCTAGCGGAGACAGAGCACTGTGGTGCCACACC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCAATCCCTTAGGGCTCTaGTTCCCCGGGCCCTACTCA +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSNPLGL*FPGPYS
Trigger: TGAGTAGGGCCCGGGGAAGCAGAGCCCTAAGGGATT...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACCGTACCCAGCCAGTaGCCACCTGCTCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSTVPSQ*PPALRG
Trigger: ACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGT...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCGCTCCCTCGGTGCCGTaGTCCGGTGCGGCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTAPSVP*SGAACR
Trigger: ACGGCACGCCGCACCGGAGCACGGCACCGAGGGAGC...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCAGTGGCGGCCGGGGGCAGAGGTaGCCCAAGGCAGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: GSRTASISMVPDISGGSGGRGQR*PKAGAW
Trigger: CCATGCTCCTGCCTTGGGCCACCTCTGCCCCCGGCC...GCCACTGCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTCAGAACATTCCCGGCTaGCAGCGGCACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSQNIPG*QRHWVF
Trigger: GAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTG...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCCTGCGGGGAGCCCAGTaGATACTGGGGAAACATCTC +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSLRGAQ*ILGKHL
Trigger: GAGATGTTTCCCCAGTATCCACTGGGCTCCCCGCAG...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCCAACTGCGGCTCCCTaGTCAGGTCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGPTAAP*SGPEDS
Trigger: AGAGTCCTCTGGACCTGACCAGGGAGCCGCAGTTGG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGATGCCATTGGTACCGTaGGCCACCTGGCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRMPLVP*ATWLCS
Trigger: GGAGCAGAGCCAGGTGGCCCACGGTACCAATGGCAT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACCCCCTCTTCGGGAATaGGGTATGGAGGTTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVPPLRE*GMEVRG
Trigger: CCCCCGAACCTCCATACCCCATTCCCGAAGAGGGGG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTTTGCCATCTTCCTGGTaGGGTGTAGAGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EGPVTSLQVTVWRLPRCRLPSSW*GVESPG
Trigger: TCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAA...ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCCTTGCCATCTTCCTaGTGGGGTGTAGAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRALPSS*WGVESP
Trigger: CGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGTAGGGAGAGTCCTGTaGAGGGCACCGTACCCAGCC +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVVGRVL*RAPYPA
Trigger: GGCTGGGTACGGTGCCCTCCACAGGACTCTCCCTAC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCGCCCCAGGGGGTGGGTaGGTCTGCCGGGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTAPGGG*VCREAS
Trigger: TGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGC...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228918.9
3UTR CAA 72 bp CCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTaGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PCSGAACRSGQQ*VSCALSVPEAE
Trigger: CTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCGGCTACATTTAGCTaGGACATAGGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRAATFS*DIGAWR
Trigger: CCGCCAGGCACCTATGTCTCAGCTAAATGTAGCCGC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp AGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGGCACCGCCTGGGGCTaGGATGCTGCCAGGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RRWQGAERRPVAAERPASGTAWG*DAARSP
Trigger: CGGGCTCCTGGCAGCATCGCAGCCCCAGGCGGTGCC...TGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCCTTTTCCTGGTCCCTaGAGGTCTGGTTCTCCGACG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRPFPGP*RSGSPT
Trigger: CGTCGGAGAACCAGACCTGCAGGGACCAGGAAAAGG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGAGGACTCTGCTGTTaGGGCACCCCTGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSRGLCC*GTPASK
Trigger: TTTGGAGGCAGGGGTGCCGCAACAGCAGAGTCCTCT...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGCTCCGAGAAGGTGCCCTTGTaGCCCCCTTCTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARDVLAGDRVAAPSVPCSEKVPL*PPSSAF
Trigger: AAAGGCAGAAGAAGGGGGGCACAAGGGCACCTTCTC...GGAGCACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACAGCCAGTGCCCACCTaGTCTCAGAGGTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVQPVPT*SQRCLS
Trigger: GCTCAGACACCTCTGAGAGCAGGTGGGCACTGGCTG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGAGGCCTCAGGTTTaGTCAGGCAGTAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRGRPQV*SGSRES
Trigger: ACTCTCCCTACTGCCTGAGCAAACCTGAGGCCTCCC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGAGGAGGTATTCTaGAAGTGCCCGGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVGEEVF*KCPALQ
Trigger: CTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCCTCCACCAGACCTTaGTTCTCACACCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRASTRP*FSHLVW
Trigger: CCACACCAGGTGTGAGAACCAAGGTCTGGTGGAGGC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCGGCCAGCATCAGCATaGTTCCTGACATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGRPASA*FLTSLG
Trigger: CCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGTTCCAGCTACAGGATTaGGTCCCTCTCCCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRFQLQD*VPLPAD
Trigger: GTCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAA...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGTCAGGGAAGTATGGATaGGCCTTCGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGSGKYG*AFGGSQ
Trigger: CTGGGAGCCTCCGAAGGCCCATCCATACTTCCCTGA...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACCAACTGCGGCTCCCTaGTCAGGTCCAGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVPTAAP*SGPEDS
Trigger: AGAGTCCTCTGGACCTGACCAGGGAGCCGCAGTTGG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTTGCCATCTTCCTGGTaGGGTGTAGAGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSLPSSW*GVESPG
Trigger: TCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
3UTR CAA 72 bp AGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTaGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: STTNPLEGPVTS*QVTVWRLPRCR
Trigger: ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACATCAGCATGGTTCCTaGCATCTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVHQHGS*HLWGQW
Trigger: CCACTGCCCCCAGAGATGTCAGGAACCATGCTGATG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGACTCAGGGCCGATGTaGACCCCAGGGCCGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQDSGPM*TPGPGA
Trigger: CGCTCCCGGCCCTGGGGTGCACATCGGCCCTGAGTC...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGGTGGCTCTTCCAGATaGAGGAGAAGACGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSGGSSR*RRRRWQ
Trigger: TTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGCGATCCCAGTTTCCTaGAGAGAGAAGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSAIPVS*REKGGS
Trigger: AGAGCCACCCTTCTCTCTGCAGGAAACTGGGATCGC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACTAGGTGCCAAGCCTTaGCATCTTCCTGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVLGAKP*HLPGGV
Trigger: CACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTCTGTCTCCGCTAGGTaGCAAGCCTTGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSSVSAR*QALPSS
Trigger: GGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGAGAAGGTGCCCTTGTaGCCCCCTTCTTCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGEKVPL*PPSSAF
Trigger: AAAGGCAGAAGAAGGGGGGCACAAGGGCACCTTCTC...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGCCCGAGCCCAGAGCCTaGGACGGGACTCAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQPEPRA*DGTQGR
Trigger: TCGGCCCTGAGTCCCGTCCCAGGCTCTGGGCTCGGG...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCAGCAACGTGGGGGCCTaGGAGGAAGGCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTSNVGA*EEGRRP
Trigger: GGGCCTCCTGCCTTCCTCCCAGGCCCCCACGTTGCT...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGTTCTCCGACGCATATaGAGGCACCGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCVLRRI*RHRLGL
Trigger: CAGCCCCAGGCGGTGCCTCCATATGCGTCGGAGAAC...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGTGGTCCCTGCAGGTCTaGTTCTCCGACGCATATGGA +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGWSLQV*FSDAYG
Trigger: TCCATATGCGTCGGAGAACCAGACCTGCAGGGACCA...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGGCACAGCTGGCAGATaGTCAGGTAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSGTAGR*SGSSSA
Trigger: AGCACTGGAACTACCTGACCATCTGCCAGCTGTGCC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTCAGAAAGAAGGCCAGTaGCAGCAGAACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSQKEGQ*QQNGQH
Trigger: ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTG...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATTCCAGCTACAGGATTaGGTCCCTCTCCCTGCGGAC +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVFQLQD*VPLPAD
Trigger: GTCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATCAGGGAAGTATGGATaGGCCTTCGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVSGKYG*AFGGSQ
Trigger: CTGGGAGCCTCCGAAGGCCCATCCATACTTCCCTGA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCAAGTCAGGGAAGTATaGATGGGCCTTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGQVREV*MGLRRL
Trigger: GAGCCTCCGAAGGCCCATCCATACTTCCCTGACTTG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTACTGCGGGGAGCCCAGTaGATACTGGGGAAACATCTC +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVLRGAQ*ILGKHL
Trigger: GAGATGTTTCCCCAGTATCCACTGGGCTCCCCGCAG...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR TCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTCCCAACTTCATCTTTaGGCTCGGCTTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSSQLHL*ARLQCQ
Trigger: CTGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp AGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCACTGGGGCTGCGATGCTaGCAGGAGCCCGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRRWQGAERRPVAAERPALGLRC*QEPEEA
Trigger: GGCCTCTTCGGGCTCCTGGCAGCATCGCAGCCCCAG...TGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGCGCCTGGGGCTGCGATaGTGCCAGGAGCCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQRLGLR*CQEPEE
Trigger: CTCTTCGGGCTCCTGGCAGCATCGCAGCCCCAGGCG...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp GAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCGCCTGGGGCTGCGATaGTGCCAGGAGCCCGAAGAG +
Preference number: 4 (lower is better)
Translates to: EDGGKEQKEGQWQQNGQHRLGLR*CQEPEE
Trigger: CTCTTCGGGCTCCTGGCAGCATCGCAGCCCCAGGCG...ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRTGSSV*LCRGQS
Trigger: AGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGAGGTATTCTGGAAGTaGCCGGCCTTGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: AACRSGQQLVSCALSVPEEVFWK*PALQGT
Trigger: CGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTC...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGCGATCCCAGTTTCCTaGAGAGAGAAGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVAIPVS*REKGGS
Trigger: AGAGCCACCCTTCTCTCTGCAGGAAACTGGGATCGC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp GGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTAGCAACGTGGGGGCCTaGGAGGAAGGCAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GKEQKEGQWQQNGQHQHGSNVGA*EEGRRP
Trigger: GGGCCTCCTGCCTTCCTCCCAGGCCCCCACGTTGCT...ACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCCTCGAGGCCCATCACTaGGTCACAGGGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTLEAHH*VTGAAQ
Trigger: CTGTGCCGCCCCTGTGACCCAGTGATGGGCCTCGAG...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSLQGTQ*LLPFPT
Trigger: AGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGAGGAGAGGTTTaGCTGCCAGATTCAACTGGA +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVGGGEV*LPDSTG
Trigger: TCCAGTTGAATCTGGCAGCCAAACCTCTCCTCCCCC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS-3UTR TCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATCCCAACTTCATCTTTaGGCTCGGCTTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVSQLHL*ARLQCQ
Trigger: CTGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR TCA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGCATCAGCATGGTTCCTaGCATCTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AACRSGQQLVSCALSVPEHQHGS*HLWGQW
Trigger: CCACTGCCCCCAGAGATGTCAGGAACCATGCTGATG...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp GTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCCCTGCGGACGCCTCTTaGGCAGCGATCCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: VVGSSWYHVPCPCLRLSSPADAS*AAIPVS
Trigger: GGAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGG...GCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp GACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGGCTCAGGGCAGGTTCTaGCATCTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: DGGKEQKEGQWQQNGQHQAQGRF*HLWGQW
Trigger: CCACTGCCCCCAGAGATGTCAGAACCTGCCCTGAGC...CTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGCCTTTTCCTGGTCCCTaGAGGTCTGGTTCTCCGACG +
Preference number: 4 (lower is better)
Translates to: AACRSGQQLVSCALSVPEPFPGP*RSGSPT
Trigger: CGTCGGAGAACCAGACCTGCAGGGACCAGGAAAAGG...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVSSVCL*RGQSPR
Trigger: TCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCAGTGGCGGCAGTGCCTGGAGCTaGCTCCACCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: GSRTASISMVPDISGGSGGSAWS*LHQTLV
Trigger: AACCAAGGTCTGGTGGAGGCAGCTCCAGGCACTGCC...GCCACTGCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp GTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCAGGTCCAGAGGACTCTaGTGTTGCGGCACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VVGSSWYHVPCPCLRLSSRSRGL*CCGTPA
Trigger: GGCAGGGGTGCCGCAACAGCAGAGTCCTCTGGACCT...GCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCTCGAGGCCCATCACTaGGTCACAGGGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: EDGGKEQKEGQWQQNGQHLEAHH*VTGAAQ
Trigger: CTGTGCCGCCCCTGTGACCCAGTGATGGGCCTCGAG...ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CCA 90 bp GGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGCTCGAGGCCCATCACTaGGTCACAGGGGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GAERRPVAAERPASAWFLLEAHH*VTGAAQ
Trigger: CTGTGCCGCCCCTGTGACCCAGTGATGGGCCTCGAG...CAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CCA 90 bp AGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCTGGCAGCGGGCGCTaGGGGAGGAGGTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RRWQGAERRPVAAERPASAGSGR*GRRYSG
Trigger: TCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCAGC...TGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp GTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCAGTGCAGGTTGTGTCGGACTaGGCAGTGCCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VAAERPASAWFLTSLGAVQVVSD*AVPGAA
Trigger: GGCAGCTCCAGGCACTGCCCAGTCCGACACAACCTG...CACTGCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp GAGGGGCCCGTGACGTCCTTGCAGGTGACCGTGTGGCGGCTCCCTCGGTGCCGTGATAAATTGGTTCCTTaGGCCCCTGTTAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EGPVTSLQVTVWRLPRCRDKLVP*APVRGC
Trigger: ACACCCTCTAACAGGGGCCCAAGGAACCAATTTATC...ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAAGGACGTCACGGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp GGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCAGTGGCGCGGCTACATTTAGCTaGGACATAGGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSRTASISMVPDISGGSGAATFS*DIGAWR
Trigger: CCGCCAGGCACCTATGTCTCAGCTAAATGTAGCCGC...GCCACTGCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR TCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTCTACCTCAGTCCACGTaGAGTGTGGAACCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCLPQST*SVEPQR
Trigger: CCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAG...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp GAGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCGAGGTATTCTGGAAGTaGCCGGCCTTGCAGGGGACG +
Preference number: 4 (lower is better)
Translates to: EKTVARSRKKASGSRTASEVFWK*PALQGT
Trigger: CGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTC...GCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp AAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGGGGGTGGGCAGTGCCTGGAGCTaGCTCCACCAGACCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KKASGSRTASISMVPVGVGSAWS*LHQTLV
Trigger: AACCAAGGTCTGGTGGAGGCAGCTCCAGGCACTGCC...CACCCCCACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGGTGGCTCTTCCAGATaGAGGAGAAGACGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AACRSGQQLVSCALSVPEGGSSR*RRRRWQ
Trigger: TTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACC...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTTCTGTCTCCGCTAGGTaGCAAGCCTTGCCATCTTCC +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCSVSAR*QALPSS
Trigger: GGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGA...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGAGGAGAGGTTTGGCTaGCAGATTCAACTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVEERFG*QIQLER
Trigger: CCTTTCCAGTTGAATCTGGCAGCCAAACCTCTCCTC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS-3UTR CCA 90 bp TGCAGAGAGAAGGGTGGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGGAGCATATGGAGGCACCGCCTaGGGCTGCGATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CREKGGSSRCRRRRWQGAYGGTA*GCDAAR
Trigger: CCTGGCAGCATCGCAGCCCCAGGCGGTGCCTCCATA...TGCTCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp TGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGGTTCTCCGACGCATATaGAGGCACCGCCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WQGAERRPVAAERPASAWVLRRI*RHRLGL
Trigger: CAGCCCCAGGCGGTGCCTCCATATGCGTCGGAGAAC...CCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAAATTCTCGGCACATGTaGCACAAACTGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVNSRHM*HKLCPG
Trigger: TCCGGGACACAGTTTGTGCCACATGTGCCGAGAATT...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGATAAATTGGTTCCTTaGGCCCCTGTTAGAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSDKLVP*APVRGC
Trigger: ACACCCTCTAACAGGGGCCCAAGGAACCAATTTATC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR TCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCGCGGCTACATTTAGCTaGGACATAGGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTAATFS*DIGAWR
Trigger: CCGCCAGGCACCTATGTCTCAGCTAAATGTAGCCGC...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp GAGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCCATCAGCATGGTTCCTaGCATCTCTGGGGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: EKTVARSRKKASGSRTASHQHGS*HLWGQW
Trigger: CCACTGCCCCCAGAGATGTCAGGAACCATGCTGATG...GCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCSSVCL*RGQSPR
Trigger: TCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGA...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCTGSSV*LCRGQS
Trigger: AGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGT...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp GCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTGGAAGTGCCCGGCCTTaGAGGGGACGCAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ARSRKKASGSRTASISMVGSARP*RGRSGC
Trigger: ACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCC...AACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGCTCTAATGGATTTTTaGAGGTTGTGTCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVALMDF*RLCRTG
Trigger: CCCAGTCCGACACAACCTGCAAAAATCCATTAGAGC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR GCA 90 bp GTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGGGTCCCCGGGTTCCAACTaGGGCTCCCTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VYLSPREVWNPKGSLKLGSPGSN*GSLVRS
Trigger: GGACCTGACCAGGGAGCCGCAGTTGGAACCCGGGGA...CCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGGGTATGGAGGCACCGCCTaGGGCTGCGATGCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VYLSPREVWNPKGSLKLGYGGTA*GCDAAR
Trigger: CCTGGCAGCATCGCAGCCCCAGGCGGTGCCTCCATA...CCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCGGCACAGCTGGCAGATaGTCAGGTAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASGSRTASISMVPDISGGGTAGR*SGSSSA
Trigger: AGCACTGGAACTACCTGACCATCTGCCAGCTGTGCC...GCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp AGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCACAGAACATTCCCGGCTaGCAGCGGCACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RRRWQGAERRPVAAERPAQNIPG*QRHWVF
Trigger: GAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTG...TGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CCA 90 bp TGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGGGGGAGGAGGTATTCTaGAAGTGCCCGGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: WQGAERRPVAAERPASAWGEEVF*KCPALQ
Trigger: CTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCC...CCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp GAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTCTTGGTTCTCACACCTaGTGTGGGGCTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EQKEGQWQQNGQHQHGSCLGSHT*CGAGSG
Trigger: CCCGCTGCCAGCCCCACACCAGGTGTGAGAACCAAG...ACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp GACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGGCCTCCACCAGACCTTaGTTCTCACACCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DGGKEQKEGQWQQNGQHQASTRP*FSHLVW
Trigger: CCACACCAGGTGTGAGAACCAAGGTCTGGTGGAGGC...CTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp GCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCAGGTTGTGTCGGACTaGGCAGTGCCTGGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ARSRKKASGSRTASISMVQVVSD*AVPGAA
Trigger: GGCAGCTCCAGGCACTGCCCAGTCCGACACAACCTG...AACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CCA 90 bp GACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCGGCCAGCATCAGCATaGTTCCTGACATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DGGKEQKEGQWQQNGQHQRPASA*FLTSLG
Trigger: CCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCG...CTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGTCATGGGTGATAAATTaGTTCCTTGGGCCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRSWVIN*FLGPLL
Trigger: TAACAGGGGCCCAAGGAACCAATTTATCACCCATGA...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCCTTCGGAACTGCCTGTaGCCGCCTGGTAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSLRNCL*PPGRAG
Trigger: CCCTGCTCTACCAGGCGGCCACAGGCAGTTCCGAAG...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR TCA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTACTCAGGCCCCTGTaGATCCCACGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSLLRPL*IPRGQG
Trigger: GCCCTGCCCACGTGGGATTCACAGGGGCCTGAGTAG...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGAGGCACCTTTAATTaGGATGCTAATGAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRGGTFN*DANEIP
Trigger: AGGAATCTCATTAGCATCTCAATTAAAGGTGCCTCC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS-3UTR TCA 90 bp GACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGTGGTTCTCACACCTTTaGGCTCGGCTTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: DGGKEQKEGQWQQNGQHQWFSHL*ARLQCQ
Trigger: CTGGCACTGAAGCCGAGCTCAAAGGTGTGAGAACCA...CTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp GGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTCCTTTTCCTGGTCCCTaGAGGTCTGGTTCTCCGACG +
Preference number: 4 (lower is better)
Translates to: GKEQKEGQWQQNGQHQHGPFPGP*RSGSPT
Trigger: CGTCGGAGAACCAGACCTGCAGGGACCAGGAAAAGG...ACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR GCA 90 bp GAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGGGGGGGTGGCTCTTCCAGATaGAGGAGAAGACGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ERRPVAAERPASAWFLWGGGSSR*RRRRWQ
Trigger: TTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACC...CCCCCACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTAATTCTCGGCACATGTaGCACAAACTGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCNSRHM*HKLCPG
Trigger: TCCGGGACACAGTTTGTGCCACATGTGCCGAGAATT...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGCGGCCAGCATCAGCATaGTTCCTGACATCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQRPASA*FLTSLG
Trigger: CCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCG...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGGTGACCCAGAAAGAAGGCCAGTaGCAGCAGAACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GMSTTNPLEGPVTSLQVTQKEGQ*QQNGQH
Trigger: ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTG...GGTCACCTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp AAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGGGGGTGCAGAAAGAAGGCCAGTaGCAGCAGAACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KKASGSRTASISMVPVGVQKEGQ*QQNGQH
Trigger: ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTG...CACCCCCACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTAAGCAGCCCCAGGGGGTaGGTGGGTCTGCCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLSSPRG*VGLPGG
Trigger: GCCTCCCGGCAGACCCACCCACCCCCTGGGGCTGCT...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCGTAGTGGGCAGCAGTTaGTATCATGTGCCCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VVGSSWYHVPCPCLRLSSVVGSS*YHVPCP
Trigger: CGGACAGGGCACATGATACCAACTGCTGCCCACTAC...GCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCTCTAATGGATTTTTaGAGGTTGTGTCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCALMDF*RLCRTG
Trigger: CCCAGTCCGACACAACCTGCAAAAATCCATTAGAGC...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTGGTCCCTGCAGGTCTaGTTCTCCGACGCATATGGA +
Preference number: 4 (lower is better)
Translates to: GKEQKEGQWQQNGQHQHGWSLQV*FSDAYG
Trigger: TCCATATGCGTCGGAGAACCAGACCTGCAGGGACCA...ACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATGCAGGGTCTACCTAGGTTCGGGGGTAGCTaGGAGGTCTCCAGGACCCGG +
Preference number: 4 (lower is better)
Translates to: RGGKERPPYNFIFMQGLPRFGGS*EVSRTR
Trigger: CCGGGTCCTGGAGACCTCCCAGCTACCCCCGAACCT...AGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGAGACTCAGTCAGTCATaGGTGATAAATTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGRLSQS*VINWFL
Trigger: AAGGAACCAATTTATCACCCATGACTGACTGAGTCT...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CCA 90 bp AGGGGAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATGCAGGGTCTACCTTTGCAGGTGACCGTGTaGCGGCTCCCTCGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: RGGKERPPYNFIFMQGLPLQVTV*RLPRCR
Trigger: ACGGCACCGAGGGAGCCGCCACACGGTCACCTGCAA...AGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp AGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCACGGCCAGCATCAGCATaGTTCCTGTGGGGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: RRWQGAERRPVAAERPASRPASA*FLWGCL
Trigger: TAAACACCCCCACAGGAACCATGCTGATGCTGGCCG...TGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp AGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RRWQGAERRPVAAERPASTGSSV*LCRGQS
Trigger: AGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGT...TGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp AGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCAACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RRRWQGAERRPVAAERPATGSSV*LCRGQS
Trigger: AGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGT...TGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCGGTGGCTCTTCCAGATaGAGGAGAAGACGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSGGSSR*RRRRWQ
Trigger: TTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACC...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCGCGATCCCAGTTTCCTaGAGAGAGAAGGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSAIPVS*REKGGS
Trigger: AGAGCCACCCTTCTCTCTGCAGGAAACTGGGATCGC...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR GCA 90 bp GTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGGGAGAGGACTCTGCTGTTaGGGCACCCCTGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VYLSPREVWNPKGSLKLGRGLCC*GTPASK
Trigger: TTTGGAGGCAGGGGTGCCGCAACAGCAGAGTCCTCT...CCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAATAATTTCATCTTCATaGAGGGTCTACCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVIISSS*RVYLSP
Trigger: TGGACTGAGGTAGACCCTGCATGAAGATGAAATTAT...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCAACTTGCTTCGGAACTaGCTGTGGCCGCCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSNLLRN*LWPPGR
Trigger: TCTACCAGGCGGCCACAGGCAGTTCCGAAGCAAGTT...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTAAGGCGGCCAGCAACGTaGGGGCCTGGGAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLRRPAT*GPGRKA
Trigger: TGCCTTCCTCCCAGGCCCCCACGTTGCTGGCCGCCT...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCAGAACATTCCCGGCTaGCAGCGGCACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSQNIPG*QRHWVF
Trigger: GAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTG...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACT +
Preference number: 4 (lower is better)
Translates to: GGKEQKEGQWQQNGQHQHLQGTQ*LLPFPT
Trigger: AGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAA...ATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCCAGAAAGAAGGCCAGTaGCAGCAGAACGGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSQKEGQ*QQNGQH
Trigger: ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTG...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CCA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTTCATGGGTGATAAATTaGTTCCTTGGGCCCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCSWVIN*FLGPLL
Trigger: TAACAGGGGCCCAAGGAACCAATTTATCACCCATGA...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR TCA 90 bp AGGGGAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATGCAGGGTCTACCTGACCCGCCGGTGACATaGATGCCATTGGTACCGTGG +
Preference number: 4 (lower is better)
Translates to: RGGKERPPYNFIFMQGLPDPPVT*MPLVPW
Trigger: CCACGGTACCAATGGCATTCATGTCACCGGCGGGTC...AGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp GCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ARSRKKASGSRTASISMVSSVCL*RGQSPR
Trigger: TCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGA...AACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSSSVCL*RGQSPR
Trigger: TCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGA...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp GAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGAGAGTAGGGAAACTTaGTTCGGAACTGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EQKEGQWQQNGQHQHGSCESRET*FGTACG
Trigger: GCCACAGGCAGTTCCGAAGCAAGTTTCCCTACTCTC...ACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTACCTCCAGGGCTCCCATaGCGGAGCTCAGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLPPGLP*RSSGSG
Trigger: CCCACTTCCTGAGCTCCGCCATGGGAGCCCTGGAGG...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATAATTCTCGGCACATGTaGCACAAACTGTGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EDGGKEQKEGQWQQNGQHNSRHM*HKLCPG
Trigger: TCCGGGACACAGTTTGTGCCACATGTGCCGAGAATT...ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CCA 90 bp GTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGGGGGCACAGCTGGCAGATaGTCAGGTAGTTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VYLSPREVWNPKGSLKLGGTAGR*SGSSSA
Trigger: AGCACTGGAACTACCTGACCATCTGCCAGCTGTGCC...CCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTGCCTCCACCAGACCTTaGTTCTCACACCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSASTRP*FSHLVW
Trigger: CCACACCAGGTGTGAGAACCAAGGTCTGGTGGAGGC...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCGCTCTAATGGATTTTTaGAGGTTGTGTCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSALMDF*RLCRTG
Trigger: CCCAGTCCGACACAACCTGCAAAAATCCATTAGAGC...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp TGCAGAGAGAAGGGTGGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGGAGCAGCTCTAATGGATTTTTaGAGGTTGTGTCGGACTGGG +
Preference number: 4 (lower is better)
Translates to: CREKGGSSRCRRRRWQGAALMDF*RLCRTG
Trigger: CCCAGTCCGACACAACCTGCAAAAATCCATTAGAGC...TGCTCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR GCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTAGGTGTGGCACCACAGTaGTCTGTCTCCGCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLGVAPQ*SVSARC
Trigger: GCACCTAGCGGAGACAGAGCACTGTGGTGCCACACC...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR GCA 90 bp CTAGGAATCCTACCCAACCCCCTAGTTGTTAATGACTCCCTTTCCTCTCCTCTAACCGTACCCAGCCAGTaGCCACCTGCTCTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LGILPNPLVVNDSLSSPLTVPSQ*PPALRG
Trigger: ACCTCTGAGAGCAGGTGGGCACTGGCTGGGTACGGT...TAGAGGAGAGGAAAGGGAGTCATTAACAACTAGGGGGTTGGGTAGGATTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp AGGGGAGGGAAGGAGCGTCCTCCCTATAATTTCATCTTCATGCAGGGTCTACCTCAAGTCAGGGAAGTATaGATGGGCCTTCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RGGKERPPYNFIFMQGLPQVREV*MGLRRL
Trigger: GAGCCTCCGAAGGCCCATCCATACTTCCCTGACTTG...AGGTAGACCCTGCATGAAGATGAAATTATAGGGAGGACGCTCCTTCCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCTATAATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACGGGGAGGAGGTATTCTaGAAGTGCCCGGCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: PIISSSCRVYLSPREVWNGEEVF*KCPALQ
Trigger: CTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCC...GTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCTATAATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACGCCTTGCCATCTTCCTaGTGGGGTGTAGAGAGCCCG +
Preference number: 4 (lower is better)
Translates to: PIISSSCRVYLSPREVWNALPSS*WGVESP
Trigger: CGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGC...GTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp GTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTCTGAAGCTTGGGAGACTCAGTCAGTCATaGGTGATAAATTGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VYLSPREVWNPKGSLKLGRLSQS*VINWFL
Trigger: AAGGAACCAATTTATCACCCATGACTGACTGAGTCT...CCCAAGCTTCAGAGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CCA 90 bp CCTATAATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACAGTCCACGTGAAGTGTaGAACCCCAAAGGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PIISSSCRVYLSPREVWNSPREV*NPKGSL
Trigger: CAGAGACCCTTTGGGGTTCCACACTTCACGTGGACT...GTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS GCA 90 bp GAGGAAGGCAGGAGGCCCGACGTCCTGGGCAGCGGTGGCGGCGGCTaGCCGAGCCCAGAGCCTGGGACGGGACTCAGGGCCGATGTGCAC +
Preference number: 5 (lower is better)
Translates to: EEGRRPDVLGSGGGG*PSPEPGTGLRADVH
Trigger: GTGCACATCGGCCCTGAGTCCCGTCCCAGGCTCTGGGCTCGGGCAGCCGCCGCCACCGCTGCCCAGGACGTCGGGCCTCCTGCCTTCCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
CDS-3UTR CAA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGGCCCGTGACGTCCTaGCAGGTGACCGTGTGGCGG +
Preference number: 5 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGGPVTS*QVTVWR
Trigger: CCGCCACACGGTCACCTGCAAGGACGTCACGGGCCC...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS CCA 90 bp CGTGGGCCACCTGGCTCTGCTCCCCGGGTTCCAACTGCGGCTCCCTaGTCAGGTCCAGAGGACTCTGCTGTTGCGGCACCCCTGCCTCCA +
Preference number: 5 (lower is better)
Translates to: RGPPGSAPRVPTAAP*SGPEDSAVAAPLPP
Trigger: TGGAGGCAGGGGTGCCGCAACAGCAGAGTCCTCTGGACCTGACCAGGGAGCCGCAGTTGGAACCCGGGGAGCAGAGCCAGGTGGCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS-3UTR CAA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTTGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSWKCPA*QGTQWL
Trigger: CAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCA...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCCCTGCGGACGCCTCTaGAGCAGCGATCCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGPCGRL*SSDPSF
Trigger: GAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGGG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCAGAGGACTCTGCTGTaGCGGCACCCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRQRTLL*RHPCLQ
Trigger: TTGGAGGCAGGGGTGCCGCAACAGCAGAGTCCTCTG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS GCA 90 bp CCATTGGTACCGTGGGCCACCTGGCTCTGCTCCCCGGGTTCCAACTaGGGCTCCCTGGTCAGGTCCAGAGGACTCTGCTGTTGCGGCACC +
Preference number: 5 (lower is better)
Translates to: PLVPWATWLCSPGSN*GSLVRSRGLCCCGT
Trigger: GGTGCCGCAACAGCAGAGTCCTCTGGACCTGACCAGGGAGCCGCAGTTGGAACCCGGGGAGCAGAGCCAGGTGGCCCACGGTACCAATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCTTCCAGCTACAGGATaGGGTCCCTCTCCCTGCGGA +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRLPATG*GPSPCG
Trigger: TCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAAG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGCTTCCAGCTACAGGATaGGGTCCCTCTCCCTGCGGA +
Preference number: 5 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGLPATG*GPSPCG
Trigger: TCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAAG...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGCTAGGTGCCAAGCCTaGCCATCTTCCTGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGARCQA*PSSWWG
Trigger: ACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGC...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS CCA 90 bp TCGAGGGCCCAGGCAGCACAGAACATTCCCGGCTGGCAGCGGCACTaGGTCTTCCGTTTGCTTGTGCAGGGGGCAATCTCCTCGAGGCCC +
Preference number: 5 (lower is better)
Translates to: SRAQAAQNIPGWQRH*VFRLLVQGAISSRP
Trigger: GGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTGCCTGGGCCCTCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CCA 90 bp CAGTGCTCTGTCTCCGCTAGGTGCCAAGCCTTGCCATCTTCCTGGTaGGGTGTAGAGAGCCCGGGAGGGCCAGGGTCCCCCTCTTCGGGA +
Preference number: 5 (lower is better)
Translates to: QCSVSARCQALPSSW*GVESPGGPGSPSSG
Trigger: TCCCGAAGAGGGGGACCCTGGCCCTCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS CCA 90 bp CCACAGTGCTCTGTCTCCGCTAGGTGCCAAGCCTTGCCATCTTCCTaGTGGGGTGTAGAGAGCCCGGGAGGGCCAGGGTCCCCCTCTTCG +
Preference number: 5 (lower is better)
Translates to: PQCSVSARCQALPSS*WGVESPGGPGSPSS
Trigger: CGAAGAGGGGGACCCTGGCCCTCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRGSSVC*CRGQSP
Trigger: AGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCC...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGTGCCTCCACCAGACCTaGGTTCTCACACCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRCLHQT*VLTPGV
Trigger: CACACCAGGTGTGAGAACCAAGGTCTGGTGGAGGCA...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGCTAGGTGCCAAGCCTaGCCATCTTCCTGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVARCQA*PSSWWG
Trigger: ACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGC...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGGGAGGAGAGGTTaGGCTGCCAGATTCAACTGG +
Preference number: 5 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSRGRRG*AARFNW
Trigger: CCAGTTGAATCTGGCAGCCAAACCTCTCCTCCCCCT...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539925.5
CDS GCA 90 bp AGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGAGGCCCATCACTGGCGGGGAGACGG +
Preference number: 5 (lower is better)
Translates to: RTFPAGSGTGSSVCL*RGQSPRGPSLAGRR
Trigger: CCGTCTCCCCGCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS GCA 90 bp CAGCACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: QHRTFPAGSGTGSSV*LCRGQSPRGPSLAG
Trigger: CCCCGCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS CCA 90 bp GTGGGAAGCTGGAGGCAGCCCAGACCTCCTGGAGCCCTGCAGTCCTaGGGCAGAGACAGAATCAGGACACAGCTCGAGGTCAGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: VGSWRQPRPPGALQS*GRDRIRTQLEVRAR
Trigger: TCTGGCCCTGACCTCGAGCTGTGTCCTGATTCTGTCTCTGCCCCAGGACTGCAGGGCTCCAGGAGGTCTGGGCTGCCTCCAGCTTCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546296.5
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRQGTQW*LPFPTS
Trigger: TGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTG...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGCAGAGGACTCTGCTGTaGCGGCACCCCTGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: AACRSGQQLVSCALSVPEQRTLL*RHPCLQ
Trigger: TTGGAGGCAGGGGTGCCGCAACAGCAGAGTCCTCTG...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS GCA 90 bp AGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGAGGCCCATCACTGGGTCACAGGGGC +
Preference number: 5 (lower is better)
Translates to: RTFPAGSGTGSSVCL*RGQSPRGPSLGHRG
Trigger: GCCCCTGTGACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS GCA 90 bp GGCAGCGGGCGCTGGGGGAGGAGGTATTCTGGAAGTGCCCGGCCTTaGAGGGGACGCAGTGGTTGTTACCCTTCCCAACTTCATCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSGRWGRRYSGSARP*RGRSGCYPSQLHLA
Trigger: TGCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCGCCCGCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CCA 90 bp GCCAGATTCAACTGGAAAGGAACCAGTCCCAGTCCAGCCGCAACCTaGGAGTGGGAAGCTGGAGGCAGCCCAGACCTCCTGGAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: ARFNWKGTSPSPAAT*EWEAGGSPDLLEPC
Trigger: GCAGGGCTCCAGGAGGTCTGGGCTGCCTCCAGCTTCCCACTCCCAGGTTGCGGCTGGACTGGGACTGGTTCCTTTCCAGTTGAATCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546296.5
CDS-3UTR CAA 90 bp CCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGATGGATTTTTGCAGGTaGTGTCGGACTGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: PQGVGGSAGRPQVCSGSRMDFCR*CRTGQC
Trigger: GCACTGCCCAGTCCGACACAACCTGCAAAAATCCAT...CCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp CCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTAGGGATGGATTTTTGCAGGTaGTGTCGGACTGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: PRGWVGLPGGLRFAQAVGMDFCR*CRTGQC
Trigger: GCACTGCCCAGTCCGACACAACCTGCAAAAATCCAT...CCCTACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS GCA 90 bp CAGCACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGGTCAC +
Preference number: 5 (lower is better)
Translates to: QHRTFPAGSGTGSSV*LCRGQSPRGPSLGH
Trigger: GTGACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS GCA 90 bp CCCCTGTTAGAGGGTGTGGCACCACAGTGCTCTGTCTCCGCTAGGTaGCAAGCCTTGCCATCTTCCTGGTGGGGTGTAGAGAGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: PLLEGVAPQCSVSAR*QALPSSWWGVESPG
Trigger: TCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTGTGGTGCCACACCCTCTAACAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS GCA 90 bp GCCAGGCCGCTGCACCTGTCAGGTGAGGGGGAGGAGAGGTTTGGCTaGCAGATTCAACTGGAAAGGAACCAGTCCCAGTCCAGCCGCAAC +
Preference number: 5 (lower is better)
Translates to: ARPLHLSGEGEERFG*QIQLERNQSQSSRN
Trigger: GTTGCGGCTGGACTGGGACTGGTTCCTTTCCAGTTGAATCTGGCAGCCAAACCTCTCCTCCCCCTCACCTGACAGGTGCAGCGGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539925.5
ENST00000546296.5
CDS CCA 90 bp CAGTGTGTACACTCGAGGGCCCAGGCAGCACAGAACATTCCCGGCTaGCAGCGGCACTGGGTCTTCCGTTTGCTTGTGCAGGGGGCAATC +
Preference number: 5 (lower is better)
Translates to: QCVHSRAQAAQNIPG*QRHWVFRLLVQGAI
Trigger: GATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTGCCTGGGCCCTCGAGTGTACACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS-3UTR CAA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGTGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQWKCPA*QGTQWL
Trigger: CAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCA...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp GTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGGCTGAGCAGCCCCTGCGGACGCCTCTaGAGCAGCGATCCCAGTTTC +
Preference number: 5 (lower is better)
Translates to: VVGSSWYHVPCPCLRLSSPCGRL*SSDPSF
Trigger: GAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGGG...GCTGCTCAGCCTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp CAGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTGTCATGGGTGATAAATaGGTTCCTTGGGCCCCTGTT +
Preference number: 5 (lower is better)
Translates to: QPQGVGGSAGRPQVCSGSVMGDK*VPWAPV
Trigger: AACAGGGGCCCAAGGAACCAATTTATCACCCATGAC...ACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp GCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGCCCTGTCCGTGCCTGAGCGTAGTGGGCAGCAGTaGGTATCATGTGCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: AACRSGQQLVSCALSVPERSGQQ*VSCALS
Trigger: GGACAGGGCACATGATACCAACTGCTGCCCACTACG...CTCAGGCACGGACAGGGCACATGATACCAACTGCTGCCCACTACGGCACGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp AGCCCCAGGGGGTGGGTGGGTCTGCCGGGAGGCCTCAGGTTTGCTCAGGCAGTATTCCCAACTTCATCTTaGAGCTCGGCTTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SPRGWVGLPGGLRFAQAVFPTSS*SSASVP
Trigger: TGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGAA...TACTGCCTGAGCAAACCTGAGGCCTCCCGGCAGACCCACCCACCCCCTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228918.9
ENST00000539925.5
CDS-3UTR CAA 90 bp TGCAGAGAGAAGGGTGGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGGAGCATGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: CREKGGSSRCRRRRWQGAWKCPA*QGTQWL
Trigger: CAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCA...TGCTCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS GCA 90 bp TTCGGAGGCTCCCAGCTTCCAGCTACAGGATTGGGTCCCTCTCCCTaGGGACGCCTCTTGAGCAGCGATCCCAGTTTCCTGCAGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FGGSQLPATGLGPSP*GRLLSSDPSFLQRE
Trigger: TTCTCTCTGCAGGAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAAGCTGGGAGCCTCCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000539925.5
ENST00000541005.1
CDS GCA 90 bp AAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTaGCAGGACAGCAGACAGGAGGGTGATCACAGCCCCAAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KEGQWQQNGQHQHGS*QDSRQEGDHSPKKG
Trigger: GCCCTTCTTGGGGCTGTGATCACCCTCCTGTCTGCTGTCCTGGCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541005.1
CDS CCA 90 bp CCTCGAGGCCCATCACTGGGTCACAGGGGCGGCACAGCTGGCAGATaGTCAGGTAGTTCCAGTGCTCGTTGTAGGAATTCTCGGCACATG +
Preference number: 5 (lower is better)
Translates to: PRGPSLGHRGGTAGR*SGSSSARCRNSRHM
Trigger: CATGTGCCGAGAATTCCTACAACGAGCACTGGAACTACCTGACCATCTGCCAGCTGTGCCGCCCCTGTGACCCAGTGATGGGCCTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000542830.5
ENST00000543190.5
ENST00000545445.1
CDS-3UTR CAA 90 bp GAGAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: EKTVARSRKKASGSRTASGSSVC*CRGQSP
Trigger: AGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCC...GCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CAA 90 bp AAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGGGGGTGTGCCTCCACCAGACCTaGGTTCTCACACCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: KKASGSRTASISMVPVGVCLHQT*VLTPGV
Trigger: CACACCAGGTGTGAGAACCAAGGTCTGGTGGAGGCA...CACCCCCACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS CCA 90 bp GGGGAGGAGGTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACTTCATCTGGCAAGAGAAAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GEEVFWKCPALQGTQ*LLPFPTSSGKRKAG
Trigger: GCCTGCCTTTCTCTTGCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CCA 90 bp CACATCCCCACTCACCTGGGTCACAGGGGCGGCACAGCTGGCAGATaGTCAGGTAGTTCCAGTGCTCGTTGTAGGAATTCTCGGCACATG +
Preference number: 5 (lower is better)
Translates to: HIPTHLGHRGGTAGR*SGSSSARCRNSRHM
Trigger: CATGTGCCGAGAATTCCTACAACGAGCACTGGAACTACCTGACCATCTGCCAGCTGTGCCGCCCCTGTGACCCAGGTGAGTGGGGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS CCA 90 bp GGGGGCAGAGACAGAAAGGGAGGTGCTAGGACAAAACTCGAAAGGTaGCCCTATCAGGGAAGCAGAGGAGAGGCCGTTCTAGGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GGRDRKGGARTKLER*PYQGSRGEAVLGKP
Trigger: GGGCTTCCCTAGAACGGCCTCTCCTCTGCTTCCCTGATAGGGCCACCTTTCGAGTTTTGTCCTAGCACCTCCCTTTCTGTCTCTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546296.5
CDS-3UTR CAA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGCACTGGGTCTTCCGTTaGCTTGTGCAGGGGGCAATC +
Preference number: 5 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQHWVFR*LVQGAI
Trigger: GATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTG...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp GACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: DGGKEQKEGQWQQNGQHQQGTQW*LPFPTS
Trigger: TGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTG...CTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CAA 90 bp TCGGTGCCGTGCTCCGGTGCGGCGTGCCGTAGTGGGCAGCAGTTGGTATCATGTGTCATGGGTGATAAATaGGTTCCTTGGGCCCCTGTT +
Preference number: 5 (lower is better)
Translates to: SVPCSGAACRSGQQLVSCVMGDK*VPWAPV
Trigger: AACAGGGGCCCAAGGAACCAATTTATCACCCATGAC...ACATGATACCAACTGCTGCCCACTACGGCACGCCGCACCGGAGCACGGCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp GAAGACGGTGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCTGGTAGAGCAGGGCTaGCAAGTTCTCCACCCCCTT +
Preference number: 5 (lower is better)
Translates to: EDGGKEQKEGQWQQNGQHLVEQG*QVLHPL
Trigger: AAGGGGGTGGAGAACTTGCAAGCCCTGCTCTACCAG...ATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCACCGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS TCA 90 bp CACACCCGGCCTACTGCCTACCATTTTGCCCAAGCTTCCCAGTACTaGGAAGAACCACCTCCTGTGTCCCCTGCACCTGTCCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: HTRPTAYHFAQASQY*EEPPPVSPAPVPVP
Trigger: TGGAACTGGGACAGGTGCAGGGGACACAGGAGGTGGTTCTTCTCAGTACTGGGAAGCTTGGGCAAAATGGTAGGCAGTAGGCCGGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440421.2
CDS GCA 90 bp TTCGGAGGCTCCCAGCTTCCAGCTACAGGATTGGGTCCCTCTCCCTaGAGGAAAGAGATGGAGACCCAAACAATGATGAGGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: FGGSQLPATGLGPSP*RKEMETQTMMRAPD
Trigger: GTCTGGGGCCCTCATCATTGTTTGGGTCTCCATCTCTTTCCTGCAGGGAGAGGGACCCAATCCTGTAGCTGGAAGCTGGGAGCCTCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS CCA 90 bp GGGGAGGAGGTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACTTCATCTTTGAGCTCGGCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: GEEVFWKCPALQGTQ*LLPFPTSSLSSASV
Trigger: CACTGAAGCCGAGCTCAAAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS CCA 90 bp CCAGAAATGGGTAGCAGTGGCTGTACCAAGTCAGGGAAGTATGGATaGGCCTTCGGAGGCTCCCAGCTTCCAGCTACAGGATTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PEMGSSGCTKSGKYG*AFGGSQLPATGLGP
Trigger: GGGACCCAATCCTGTAGCTGGAAGCTGGGAGCCTCCGAAGGCCCATCCATACTTCCCTGACTTGGTACAGCCACTGCTACCCATTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS CCA 90 bp GGGCTGCGGGGAGCCCAGTGGATACTGGGGAAACATCTCCAGAAATaGGTAGCAGTGGCTGTACCAAGTCAGGGAAGTATGGATGGGCCT +
Preference number: 5 (lower is better)
Translates to: GLRGAQWILGKHLQK*VAVAVPSQGSMDGP
Trigger: AGGCCCATCCATACTTCCCTGACTTGGTACAGCCACTGCTACCCATTTCTGGAGATGTTTCCCCAGTATCCACTGGGCTCCCCGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS-3UTR CAA 90 bp AGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTGGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: SRKKASGSRTASISMVPVGSSVC*CRGQSP
Trigger: AGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCC...CACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CAA 90 bp AGCTTGGGGATGAGCACCACGAATCCTTTAGAGGGGCCCGTGACGTCCTTGCAGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: SLGMSTTNPLEGPVTSLQQGTQW*LPFPTS
Trigger: TGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTG...CTGCAAGGACGTCACGGGCCCCTCTAAAGGATTCGTGGTGCTCATCCCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS-3UTR CAA 90 bp TGCAGAGAGAAGGGTGGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGGAGCAAAGTTCTCCACCCCCTaGCTCAGGGCAGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: CREKGGSSRCRRRRWQGAKFSTP*LRAGSD
Trigger: GTCAGAACCTGCCCTGAGCAAGGGGGTGGAGAACTT...TGCTCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CAA 90 bp GTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGACATCTCTGGGGGCAGTGTTGGTTCTCACACCTTaGAGCTCGGCTTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: VAAERPASAWFLTSLGAVLVLTP*SSASVP
Trigger: TGGCACTGAAGCCGAGCTCAAAGGTGTGAGAACCAA...CACTGCCCCCAGAGATGTCAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS GCA 90 bp ATAAATTGGTTCCTTGGGCCCCTGTTAGAGGGTGTGGCACCACAGTaGTCTGTCTCCGCTAGGTGCCAAGCCTTGCCATCTTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: INWFLGPLLEGVAPQ*SVSARCQALPSSWW
Trigger: CCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTGTGGTGCCACACCCTCTAACAGGGGCCCAAGGAACCAATTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS CCA 90 bp TCCCAACTTCATCTGGCAAGAGAAAGGCAGGCCAGCCAGGGTGAATaGGCAAAAGGGAGGGGCCCTTTGCCGGCCTGTGAGTTTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SQLHLARERQASQGE*AKGRGPLPACEFPL
Trigger: TAAAGGAAACTCACAGGCCGGCAAAGGGCCCCTCCCTTTTGCCCATTCACCCTGGCTGGCCTGCCTTTCTCTTGCCAGATGAAGTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS-3UTR CAA 90 bp TGGCAAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGATGGATTTTTGCAGGTaGTGTCGGACTGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: WQGAERRPVAAERPASAWMDFCR*CRTGQC
Trigger: GCACTGCCCAGTCCGACACAACCTGCAAAAATCCAT...CCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS-3UTR CAA 90 bp TGCAGAGAGAAGGGTGGCTCTTCCAGATGCAGGAGAAGACGGTGGCAAGGAGCATGCCTCCACCAGACCTaGGTTCTCACACCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: CREKGGSSRCRRRRWQGACLHQT*VLTPLS
Trigger: GCTCAAAGGTGTGAGAACCAAGGTCTGGTGGAGGCA...TGCTCCTTGCCACCGTCTTCTCCTGCATCTGGAAGAGCCACCCTTCTCTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543190.5
CDS-3UTR CAA 90 bp AAGGAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCATGGATTTTTGCAGGTaGTGTCGGACTGGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: KEQKEGQWQQNGQHQHGSMDFCR*CRTGQC
Trigger: GCACTGCCCAGTCCGACACAACCTGCAAAAATCCAT...GGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543190.5
ENST00000544454.5
CDS GCA 90 bp CTTCCTGGAGCACTTTCTCCCCAGATAACCCCATGGCTGGCTCCTTaGTTCTTCAGCTCTCCGCTCAAATATCAGGTTCTCAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LPGALSPQITPWLAP*FFSSPLKYQVLREA
Trigger: GGCCTCTCTGAGAACCTGATATTTGAGCGGAGAGCTGAAGAAGCAAGGAGCCAGCCATGGGGTTATCTGGGGAGAAAGTGCTCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS CCA 90 bp GCCTTTTCTCAGACTCAGTCAGTCATGGGTGATAAATTGGTTCCTTaGGCCCCTGTTAGAGGGTGTGGCACCACAGTGCTCTGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: AFSQTQSVMGDKLVP*APVRGCGTTVLCLR
Trigger: GCGGAGACAGAGCACTGTGGTGCCACACCCTCTAACAGGGGCCCAAGGAACCAATTTATCACCCATGACTGACTGAGTCTGAGAAAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS-3UTR CAA 90 bp GAGCAGAAAGAAGGCCAGTGGCAGCAGAACGGCCAGCATCAGCATGGTTCCTGTTTCCCAACTTCATCTTaGAGCTCGGCTTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: EQKEGQWQQNGQHQHGSCFPTSS*SSASVP
Trigger: TGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGAA...ACAGGAACCATGCTGATGCTGGCCGTTCTGCTGCCACTGGCCTTCTTTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS-3UTR CAA 90 bp TCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACCCCAAAGGGTCTTTCCCAACTTCATCTTaGAGCTCGGCTTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: SSCRVYLSPREVWNPKGSFPTSS*SSASVP
Trigger: TGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGAA...AGACCCTTTGGGGTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS CCA 90 bp CTTCTTCTGCCTTTTCTCAGACTCAGTCAGTCATGGGTGATAAATTaGTTCCTTGGGCCCCTGTTAGAGGGTGTGGCACCACAGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LLLPFLRLSQSWVIN*FLGPLLEGVAPQCS
Trigger: AGAGCACTGTGGTGCCACACCCTCTAACAGGGGCCCAAGGAACCAATTTATCACCCATGACTGACTGAGTCTGAGAAAAGGCAGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS-3UTR CAA 90 bp CCTATAATTTCATCTTCATGCAGGGTCTACCTCAGTCCACGTGAAGTGTGGAACGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCT +
Preference number: 5 (lower is better)
Translates to: PIISSSCRVYLSPREVWNGSSVC*CRGQSP
Trigger: AGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCC...GTTCCACACTTCACGTGGACTGAGGTAGACCCTGCATGAAGATGAAATTATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000228918.9
CDS TCA 90 bp AGTGCCTGGTACGTGGCATGTTCAGTAAATCATCAGTTGAATGAATaGATGAGTGTGGAGTCAGCCTGCATACTCTCTTCCTGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SAWYVACSVNHQLNE*MSVESACILSSCLL
Trigger: GAGCAGACAGGAAGAGAGTATGCAGGCTGACTCCACACTCATTCATTCATTCAACTGATGATTTACTGAACATGCCACGTACCAGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543542.1
CDS GCA 72 bp AGGAGGCCCGACGTCCTGGGCAGCGGTGGCGGCGGCTaGCCGAGCCCAGAGCCTGGGACGGGACTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RRPDVLGSGGGG*PSPEPGTGLRA
Trigger: GGCCCTGAGTCCCGTCCCAGGCTCTGGGCTCGGGCAGCCGCCGCCACCGCTGCCCAGGACGTCGGGCCTCCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
CDS CCA 72 bp GAGCATGGCGGCCACTCGGCCAGGCGGCCAGCAACGTaGGGGCCTGGGAGGAAGGCAGGAGGCCCGACGTCC +
Preference number: 6 (lower is better)
Translates to: EHGGHSARRPAT*GPGRKAGGPTS
Trigger: GGACGTCGGGCCTCCTGCCTTCCTCCCAGGCCCCCACGTTGCTGGCCGCCTGGCCGAGTGGCCGCCATGCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000543190.5
CDS GCA 72 bp TGGCCGGCCAGCGGGCGGGCTCCCCAGCCAGGCCGCTaGACCTGTCAGGTGAGGGGGAGGAGAGGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: WPASGRAPQPGR*TCQVRGRRGLA
Trigger: AGCCAAACCTCTCCTCCCCCTCACCTGACAGGTGCAGCGGCCTGGCTGGGGAGCCCGCCCGCTGGCCGGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539925.5
ENST00000546296.5
CDS GCA 72 bp CTCCGACGCATATGGAGGCACCGCCTGGGGCTGCGATaGTGCCAGGAGCCCGAAGAGGCCCAGCACCAGAGG +
Preference number: 6 (lower is better)
Translates to: LRRIWRHRLGLR*CQEPEEAQHQR
Trigger: CCTCTGGTGCTGGGCCTCTTCGGGCTCCTGGCAGCATCGCAGCCCCAGGCGGTGCCTCCATATGCGTCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000543190.5
CDS GCA 72 bp CCGTGGGCCACCTGGCTCTGCTCCCCGGGTTCCAACTaGGGCTCCCTGGTCAGGTCCAGAGGACTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: PWATWLCSPGSN*GSLVRSRGLCC
Trigger: ACAGCAGAGTCCTCTGGACCTGACCAGGGAGCCGCAGTTGGAACCCGGGGAGCAGAGCCAGGTGGCCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS GCA 72 bp TGGCAGCGGGCGCTGGGGGAGGAGGTATTCTGGAAGTaGCCGGCCTTGCAGGGGACGCAGTGGTTGTTACCC +
Preference number: 6 (lower is better)
Translates to: WQRALGEEVFWK*PALQGTQWLLP
Trigger: GGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000440421.2
ENST00000444814.2
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS GCA 72 bp CCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGAGGCCCATCACTGGCG +
Preference number: 6 (lower is better)
Translates to: PAGSGTGSSVCL*RGQSPRGPSLA
Trigger: CGCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS CAA 90 bp GAGGGTGTGGCACCACAGTGCTCTGTCTCCGCTAGGTGCCAAGCCTaGCCATCTTCCTGGTGGGGTGTAGAGAGCCCGGGAGGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: EGVAPQCSVSARCQA*PSSWWGVESPGGPG
Trigger: CCCTGGCCCTCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTGTGGTGCCACACCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS GCA 72 bp CCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTTGTaGAGGGGGCAATCTCCTCGAGGCCCATCACTGGGT +
Preference number: 6 (lower is better)
Translates to: PAGSGTGSSVCL*RGQSPRGPSLG
Trigger: ACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CAA 90 bp GCAGCACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTaGCTTGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGCGGG +
Preference number: 6 (lower is better)
Translates to: AAQNIPGWQRHWVFR*LVQGAISSRPITGG
Trigger: CCCGCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS CAA 72 bp TTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTG +
Preference number: 6 (lower is better)
Translates to: FPAGSGTGSSVC*CRGQSPRGPSL
Trigger: CAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CAA 90 bp TGGCAGCGGGCGCTGGGGGAGGAGGTATTCTGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTGTTACCCTTCCCAACTTCATCTGGC +
Preference number: 6 (lower is better)
Translates to: WQRALGEEVFWKCPA*QGTQWLLPFPTSSG
Trigger: GCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CAA 90 bp CACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: HRTFPAGSGTGSSVC*CRGQSPRGPSLAGR
Trigger: TCTCCCCGCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535739.5
CDS CAA 90 bp CACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTGCTaGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGGTCACAGG +
Preference number: 6 (lower is better)
Translates to: HRTFPAGSGTGSSVC*CRGQSPRGPSLGHR
Trigger: CCTGTGACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CAA 90 bp GCAGCACAGAACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTaGCTTGTGCAGGGGGCAATCTCCTCGAGGCCCATCACTGGGTCA +
Preference number: 6 (lower is better)
Translates to: AAQNIPGWQRHWVFR*LVQGAISSRPITGS
Trigger: TGACCCAGTGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS GCA 72 bp ACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTTaGTTGTGCAGGGGGCAATCTCCTCGAGGCCCATCA +
Preference number: 6 (lower is better)
Translates to: TFPAGSGTGSSV*LCRGQSPRGPS
Trigger: TGATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CCA 72 bp CAGGCAGCACAGAACATTCCCGGCTGGCAGCGGCACTaGGTCTTCCGTTTGCTTGTGCAGGGGGCAATCTCC +
Preference number: 6 (lower is better)
Translates to: QAAQNIPGWQRH*VFRLLVQGAIS
Trigger: GGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTTCTGTGCTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CCA 72 bp AACTGGAAAGGAACCAGTCCCAGTCCAGCCGCAACCTaGGAGTGGGAAGCTGGAGGCAGCCCAGACCTCCTG +
Preference number: 6 (lower is better)
Translates to: NWKGTSPSPAAT*EWEAGGSPDLL
Trigger: CAGGAGGTCTGGGCTGCCTCCAGCTTCCCACTCCCAGGTTGCGGCTGGACTGGGACTGGTTCCTTTCCAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546296.5
CDS CAA 72 bp AACATTCCCGGCTGGCAGCGGCACTGGGTCTTCCGTTaGCTTGTGCAGGGGGCAATCTCCTCGAGGCCCATC +
Preference number: 6 (lower is better)
Translates to: NIPGWQRHWVFR*LVQGAISSRPI
Trigger: GATGGGCCTCGAGGAGATTGCCCCCTGCACAAGCAAACGGAAGACCCAGTGCCGCTGCCAGCCGGGAATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
ENST00000545445.1
CDS CAA 72 bp GCGCTGGGGGAGGAGGTATTCTGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTGTTACCCTTCCCAACT +
Preference number: 6 (lower is better)
Translates to: ALGEEVFWKCPA*QGTQWLLPFPT
Trigger: AGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000440421.2
ENST00000444814.2
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS CAA 72 bp GCACCACAGTGCTCTGTCTCCGCTAGGTGCCAAGCCTaGCCATCTTCCTGGTGGGGTGTAGAGAGCCCGGGA +
Preference number: 6 (lower is better)
Translates to: APQCSVSARCQA*PSSWWGVESPG
Trigger: TCCCGGGCTCTCTACACCCCACCAGGAAGATGGCAAGGCTTGGCACCTAGCGGAGACAGAGCACTGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS CAA 72 bp TTCGGAACTGCCTGTGGCCGCCTGGTAGAGCAGGGCTaGCAAGTTCTCCACCCCCTTGCTCAGGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: FGTACGRLVEQG*QVLHPLAQGRF
Trigger: GAACCTGCCCTGAGCAAGGGGGTGGAGAACTTGCAAGCCCTGCTCTACCAGGCGGCCACAGGCAGTTCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS CAA 72 bp GCCTTCTCAGCCCCCGCCATTACCTGCGGACGCCTCTaGAGCAGCGATCCCAGTTTCCTGCAGAGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: AFSAPAITCGRL*SSDPSFLQREG
Trigger: CCCTTCTCTCTGCAGGAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGGTAATGGCGGGGGCTGAGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543542.1
CDS CAA 90 bp TGGCAGCGGGCGCTGGGGGAGGAGGTATTCTGGAAGTGCCCGGCCTaGCAGGGGACGCAGTGGTTGTTACCCTTCCCAACTTCATCTTTG +
Preference number: 6 (lower is better)
Translates to: WQRALGEEVFWKCPA*QGTQWLLPFPTSSL
Trigger: CAAAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCGCCCGCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS TCA 72 bp GGCACAAACTGTGTCCCGGATGCGGCTACATTTAGCTaGGACATAGGTGCCTGGCGGGCAGCGGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GTNCVPDAATFS*DIGAWRAAGAA
Trigger: TGCTGCTCCCGCTGCCCGCCAGGCACCTATGTCTCAGCTAAATGTAGCCGCATCCGGGACACAGTTTGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000539925.5
ENST00000542830.5
ENST00000543190.5
ENST00000546296.5
CDS GCA 72 bp CGCTGGGGGAGGAGGTATTCTGGAAGTGCCCGGCCTTaGAGGGGACGCAGTGGTTGTTACCCTTCCCAACTT +
Preference number: 6 (lower is better)
Translates to: RWGRRYSGSARP*RGRSGCYPSQL
Trigger: AAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTCCCCCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000228918.9
ENST00000440421.2
ENST00000444814.2
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS GCA 72 bp TCCCAGCTTCCAGCTACAGGATTGGGTCCCTCTCCCTaGGGACGCCTCTTGAGCAGCGATCCCAGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SQLPATGLGPSP*GRLLSSDPSFL
Trigger: CAGGAAACTGGGATCGCTGCTCAAGAGGCGTCCGCAGGGAGAGGGACCCAATCCTGTAGCTGGAAGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228918.9
ENST00000539925.5
ENST00000541005.1
CDS GCA 72 bp CCTGGTAGAGCAGGGCTTGCAAGTTCTCCACCCCCTTaGTCAGGGCAGGTTCTGACATCTCTGGGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: PGRAGLASSPPP*SGQVLTSLGAV
Trigger: CACTGCCCCCAGAGATGTCAGAACCTGCCCTGAGCAAGGGGGTGGAGAACTTGCAAGCCCTGCTCTACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544454.5
CDS CAA 90 bp GAAAGGCAGGCCAGCCAGGGTGAATGGGCAAAAGGGAGGGGCCCTTaGCCGGCCTGTGAGTTTCCTTTAAGCCTCAGGATGCCCATCCAC +
Preference number: 6 (lower is better)
Translates to: ERQASQGEWAKGRGP*PACEFPLSLRMPIH
Trigger: GTGGATGGGCATCCTGAGGCTTAAAGGAAACTCACAGGCCGGCAAAGGGCCCCTCCCTTTTGCCCATTCACCCTGGCTGGCCTGCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS GCA 72 bp GTGGGCAGGGCAGCCTCAAGGGAGAAGGTGCCCTTGTaGCCCCCTTCTTCTGCCTTTTCTCAGACTCAGTCA +
Preference number: 6 (lower is better)
Translates to: VGRAASREKVPL*PPSSAFSQTQS
Trigger: TGACTGAGTCTGAGAAAAGGCAGAAGAAGGGGGGCACAAGGGCACCTTCTCCCTTGAGGCTGCCCTGCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS GCA 72 bp CGTGGGCCACCACACCCGGCCTACTGCCTACCATTTTaGCCAAGCTTCCCAGTACTGAGAAGAACCACCTCC +
Preference number: 6 (lower is better)
Translates to: RGPPHPAYCLPF*PSFPVLRRTTS
Trigger: GGAGGTGGTTCTTCTCAGTACTGGGAAGCTTGGGCAAAATGGTAGGCAGTAGGCCGGGTGTGGTGGCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440421.2
CDS CAA 72 bp GCGTGGGCCACCACACCCGGCCTACTGCCTACCATTTaGCCCAAGCTTCCCAGTACTGAGAAGAACCACCTC +
Preference number: 6 (lower is better)
Translates to: AWATTPGLLPTI*PKLPSTEKNHL
Trigger: GAGGTGGTTCTTCTCAGTACTGGGAAGCTTGGGCAAAATGGTAGGCAGTAGGCCGGGTGTGGTGGCCCACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440421.2
CDS CAA 72 bp GCCAGCCAGGGTGAATGGGCAAAAGGGAGGGGCCCTTaGCCGGCCTGTGAGTTTCCTTTAAGCCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: ASQGEWAKGRGP*PACEFPLSLRM
Trigger: CATCCTGAGGCTTAAAGGAAACTCACAGGCCGGCAAAGGGCCCCTCCCTTTTGCCCATTCACCCTGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CAA 90 bp GAGGAGGTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCATCTGGCAAGAGAAAGGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: EEVFWKCPALQGTQW*LPFPTSSGKRKAGQ
Trigger: CTGGCCTGCCTTTCTCTTGCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CAA 90 bp GAGGAGGTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCATCTTTGAGCTCGGCTTCAGTGCCA +
Preference number: 6 (lower is better)
Translates to: EEVFWKCPALQGTQW*LPFPTSSLSSASVP
Trigger: TGGCACTGAAGCCGAGCTCAAAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS GCA 72 bp CTGACATCTCTGGGGGCAGTGGCTCTAATGGATTTTTaGAGGTTGTGTCGGACTGGGCAGTGCCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LTSLGAVALMDF*RLCRTGQCLEL
Trigger: CAGCTCCAGGCACTGCCCAGTCCGACACAACCTGCAAAAATCCATTAGAGCCACTGCCCCCAGAGATGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000228918.9
ENST00000444814.2
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000543190.5
ENST00000544454.5
CDS CAA 72 bp TTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCATCTTTGAGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: FWKCPALQGTQW*LPFPTSSLSSA
Trigger: AGCCGAGCTCAAAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS CCA 72 bp GTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACTTCATCTTTGAGCTCG +
Preference number: 6 (lower is better)
Translates to: VFWKCPALQGTQ*LLPFPTSSLSS
Trigger: CGAGCTCAAAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000228918.9
ENST00000535739.5
ENST00000536876.5
ENST00000539925.5
ENST00000541102.1
ENST00000544454.5
CDS CCA 72 bp CATCTTTCTTTAGTTCCCACACCCCACCGCATGCTTTaGCAACTCACCACTTGCCTCTGCTCCTCCCCATGC +
Preference number: 6 (lower is better)
Translates to: HLSLVPTPHRML*QLTTCLCSSPC
Trigger: GCATGGGGAGGAGCAGAGGCAAGTGGTGAGTTGCCAAAGCATGCGGTGGGGTGTGGGAACTAAAGAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS CCA 72 bp GTATTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTaGTTGTTACCCTTCCCAACTTCATCTGGCAAGAGA +
Preference number: 6 (lower is better)
Translates to: VFWKCPALQGTQ*LLPFPTSSGKR
Trigger: TCTCTTGCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CAA 72 bp TTCTGGAAGTGCCCGGCCTTGCAGGGGACGCAGTGGTaGTTACCCTTCCCAACTTCATCTGGCAAGAGAAAG +
Preference number: 6 (lower is better)
Translates to: FWKCPALQGTQW*LPFPTSSGKRK
Trigger: CTTTCTCTTGCCAGATGAAGTTGGGAAGGGTAACAACCACTGCGTCCCCTGCAAGGCCGGGCACTTCCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CCA 72 bp CAGACTCAGTCAGTCATGGGTGATAAATTGGTTCCTTaGGCCCCTGTTAGAGGGTGTGGCACCACAGTGCTC +
Preference number: 6 (lower is better)
Translates to: QTQSVMGDKLVP*APVRGCGTTVL
Trigger: GAGCACTGTGGTGCCACACCCTCTAACAGGGGCCCAAGGAACCAATTTATCACCCATGACTGACTGAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS CAA 72 bp TCATCTTTCTTTAGTTCCCACACCCCACCGCATGCTTaGGCAACTCACCACTTGCCTCTGCTCCTCCCCATG +
Preference number: 6 (lower is better)
Translates to: SSFFSSHTPPHA*ATHHLPLLLPM
Trigger: CATGGGGAGGAGCAGAGGCAAGTGGTGAGTTGCCAAAGCATGCGGTGGGGTGTGGGAACTAAAGAAAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS CAA 90 bp TCTTCCTGGAGCACTTTCTCCCCAGATAACCCCATGGCTGGCTCCTaGCTTCTTCAGCTCTCCGCTCAAATATCAGGTTCTCAGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SSWSTFSPDNPMAGS*LLQLSAQISGSQRG
Trigger: GCCTCTCTGAGAACCTGATATTTGAGCGGAGAGCTGAAGAAGCAAGGAGCCAGCCATGGGGTTATCTGGGGAGAAAGTGCTCCAGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS GCA 72 bp GCACTTTCTCCCCAGATAACCCCATGGCTGGCTCCTTaGTTCTTCAGCTCTCCGCTCAAATATCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: ALSPQITPWLAP*FFSSPLKYQVL
Trigger: GAGAACCTGATATTTGAGCGGAGAGCTGAAGAAGCAAGGAGCCAGCCATGGGGTTATCTGGGGAGAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS GCA 72 bp GTTTCCTTTAAGCCTCAGGATGCCCATCCACCCCATTaGGTAGCTCTCACCTTTCCCAAGCTCTGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: VSFKPQDAHPPH*VALTFPKLCFA
Trigger: AGCAAAGCAGAGCTTGGGAAAGGTGAGAGCTACGCAATGGGGTGGATGGGCATCCTGAGGCTTAAAGGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440421.2
ENST00000444814.2
CDS CCA 72 bp GGAGCCCAGTGGATACTGGGGAAACATCTCCAGAAATaGGTAGCAGTGGCTGTACCAAGTCAGGGAAGTATG +
Preference number: 6 (lower is better)
Translates to: GAQWILGKHLQK*VAVAVPSQGSM
Trigger: CATACTTCCCTGACTTGGTACAGCCACTGCTACCCATTTCTGGAGATGTTTCCCCAGTATCCACTGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541005.1
ENST00000541102.1
CDS CAA 72 bp TGGGCATGTGAACTCCAGGAAATGAGGTACTGTGTTTaGCTCACTGCTGTACGCCCAGTGCCTAGGACAGTG +
Preference number: 6 (lower is better)
Translates to: WACELQEMRYCV*LTAVRPVPRTV
Trigger: CACTGTCCTAGGCACTGGGCGTACAGCAGTGAGCAAAACACAGTACCTCATTTCCTGGAGTTCACATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441074.3
ENST00000543542.1
CDS CAA 90 bp CCTTCTTCTGCCTTTTCTCAGACTCAGTCAGTCATGGGTGATAAATaGGTTCCTTGGGCCCCTGTTAGAGGGTGTGGCACCACAGTGCTC +
Preference number: 6 (lower is better)
Translates to: PSSAFSQTQSVMGDK*VPWAPVRGCGTTVL
Trigger: GAGCACTGTGGTGCCACACCCTCTAACAGGGGCCCAAGGAACCAATTTATCACCCATGACTGACTGAGTCTGAGAAAAGGCAGAAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228918.9
ENST00000441074.3
ENST00000539925.5
ENST00000541102.1
CDS CAA 72 bp AGCACTTTCTCCCCAGATAACCCCATGGCTGGCTCCTaGCTTCTTCAGCTCTCCGCTCAAATATCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: STFSPDNPMAGS*LLQLSAQISGS
Trigger: AGAACCTGATATTTGAGCGGAGAGCTGAAGAAGCAAGGAGCCAGCCATGGGGTTATCTGGGGAGAAAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441074.3
CDS GCA 72 bp TTTTGCTCACTGCTGTACGCCCAGTGCCTAGGACAGTaGCTGGTACGTGGCATGTTCAGTAAATCATCAGTT +
Preference number: 6 (lower is better)
Translates to: FCSLLYAQCLGQ*LVRGMFSKSSV
Trigger: AACTGATGATTTACTGAACATGCCACGTACCAGGCACTGTCCTAGGCACTGGGCGTACAGCAGTGAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441074.3
ENST00000543542.1