RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTBP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000090006

Ensembl transcript IDs: ENST00000204005.13, ENST00000243562.13, ENST00000308370.11, ENST00000318809.11, ENST00000396819.8, ENST00000546155.5, ENST00000593463.5, ENST00000593738.1, ENST00000594116.1, ENST00000594448.5, ENST00000594537.2, ENST00000595118.5, ENST00000595529.1, ENST00000595665.1, ENST00000596351.5, ENST00000597071.5, ENST00000597151.1, ENST00000597816.5, ENST00000598055.1, ENST00000598166.2, ENST00000598178.1, ENST00000598256.1, ENST00000598717.5, ENST00000599016.5, ENST00000599225.1, ENST00000599724.5, ENST00000600026.5, ENST00000600499.5, ENST00000601032.5, ENST00000601464.5, ENST00000602251.5, ENST00000610893.4, ENST00000612121.4, ENST00000612845.4, ENST00000617753.4, ENST00000618486.4, ENST00000622107.4, ENST00000622457.1, ENST00000622565.4

Found 735 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTaGTACAGCCGGGGCCGGGGGCCGGGCGCCCGAGGAGTGCAACTG +
Preference number: 1 (lower is better)
Translates to: AVVGQWHSVHGAGEA*YSRGRGPGARGVQL
Trigger: CAGTTGCACTCCTCGGGCGCCCGGCCCCCGGCCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR GCA 90 bp GGGCCAGACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACGCTCACCATAGATGCCACGCCGTGC +
Preference number: 1 (lower is better)
Translates to: GPDTRSTWCTTTDAS*GCSTWTLTIDATPC
Trigger: GCACGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTCTGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 90 bp TCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGG +
Preference number: 1 (lower is better)
Translates to: STWCTTTDASCGCST*TLTIDATPCSSSRW
Trigger: CCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR GCA 90 bp GACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACCATAGATGCCACGCCGTGCTCGTCG +
Preference number: 1 (lower is better)
Translates to: DTRSTWCTTTDASCG*STWTLTIDATPCSS
Trigger: CGACGAGCACGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 90 bp CACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGCCGGGGC +
Preference number: 1 (lower is better)
Translates to: HHRCHAVLVVAVVGQ*HSVHGAGEAWYSRG
Trigger: GCCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGAAGCGGGCTGCAGGATaGGCGGCAGGGGCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: APGPGPGPRHQWEALVEAKRAAG*AAGAPS
Trigger: ACTCGGGGCCCCTGCCGCGCATCCTGCAGCCCGCTT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
3UTR-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAAGCGGGCTGCAGGATaGGCGGCAGGGGCCCCGAGT +
Preference number: 2 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSKRAAG*AAGAPS
Trigger: ACTCGGGGCCCCTGCCGCGCATCCTGCAGCCCGCTT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
3UTR-3UTR CCA 90 bp TGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: CQRSPGDRGSGQASRTHRRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...GCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp CGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: RGPGARGVQLAELASEVRVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...CCGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR GCA 90 bp GCTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATACAGGACCGGGGCCTTaGCAGCGGGGGCACGCTGTG +
Preference number: 2 (lower is better)
Translates to: AHHRCHAVLVVAVVGQWHTGPGP*QRGHAV
Trigger: CACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGT...ATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CCA 90 bp CGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGCGGGGGCACCGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: RHCDRSRDTGPGPCQRGHRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...GTGCCCCCGCTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp CACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: HTLHLVHHHRRLLRVLHVRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...CACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR-3UTR GCA 90 bp CGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 2 (lower is better)
Translates to: RGPGARGVQLAELASEVRWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...CCGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp ACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTG +
Preference number: 2 (lower is better)
Translates to: TWCTTTDASCGCSTWTLTCSSSR*LASGIV
Trigger: CACTATGCCACTGGCCAACCACCGCGACGACGAGCA...GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR-3UTR TCA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATATGTACACGGAGCGGGTaGGGCCTGGTACAGCCGGGG +
Preference number: 2 (lower is better)
Translates to: LTIDATPCSSSRWLASGICTRSG*GLVQPG
Trigger: CCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACA...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTTCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp CTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 2 (lower is better)
Translates to: LVHHHRRLLRVLHVDAHHAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...ATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR-3UTR TCA 90 bp ACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCCACACACCGCCATTGTaGCAGATCAAGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: TWCTTTDASCGCSTWTLTHTPPL*QIKGHR
Trigger: CCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTG...GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR-3UTR GCA 90 bp TGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 2 (lower is better)
Translates to: CQRSPGDRGSGQASRTHRWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...GCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp ACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATAGATGCCACGGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 2 (lower is better)
Translates to: TTDASCGCSTWTLTIDATAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...CGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR TCA 90 bp ACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: TPCSSSRWLASGIVYTERSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...CCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CCA 90 bp ATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACTCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: IDATPCSSSRWLASGIVYSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...GTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CCA 90 bp AACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACAGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: NLPAKSGGQRQRSGFTHTVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...TGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp CGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 2 (lower is better)
Translates to: RTHRHCDRSRDTGPGPCQVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...CTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp GTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGCCGGCTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 2 (lower is better)
Translates to: VVGQWHSVHGAGEAWYSRLLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...CCGGCTGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CCA 90 bp CGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: RTHRHCDRSRDTGPGPCQRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...CTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp ACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATAGATGCCACGCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 2 (lower is better)
Translates to: TTDASCGCSTWTLTIDATPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...CGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR TCA 90 bp ACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGCACACACCGCCATTGTaGCAGATCAAGGGACACAGG +
Preference number: 2 (lower is better)
Translates to: TPCSSSRWLASGIVYTERHTPPL*QIKGHR
Trigger: CCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTG...CCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR GCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 2 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACATCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 2 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 2 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp TGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATAGATGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 2 (lower is better)
Translates to: CTTTDASCGCSTWTLTIDASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...ATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR TCA 90 bp CGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: RGTEAAVRLHAHTAIVTDSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...ATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp GGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: GSGQASRTHRHCDRSRDTRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...TGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 2 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTLLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR TCA 90 bp GCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: AAVRLHAHTAIVTDQGTQSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...CTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACAGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 2 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CAA 90 bp ACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCCACAGGACCGGGGCCTaGCCAGCGGGGGCACGCTGT +
Preference number: 3 (lower is better)
Translates to: TWCTTTDASCGCSTWTLTHRTGA*PAGARC
Trigger: ACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGTG...GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 72 bp GGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTaGTGGAGGCGGGAGCAGTGCAGGGCGTCGCAGCTT +
Preference number: 3 (lower is better)
Translates to: GQARDHDISGRR*WRREQCRASQL
Trigger: AAGCTGCGACGCCCTGCACTGCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
3UTR-3UTR CAA 90 bp CTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCCACAGGACCGGGGCCTaGCCAGCGGGGGCACGCTGT +
Preference number: 3 (lower is better)
Translates to: LASEVRGTEAAVRLHAHTHRTGA*PAGARC
Trigger: ACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGTG...GGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR GCA 72 bp TCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACCATAGATGCCACGCCG +
Preference number: 3 (lower is better)
Translates to: STWCTTTDASCG*STWTLTIDATP
Trigger: CGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 72 bp TGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCCACGCCGTGCTCGTCG +
Preference number: 3 (lower is better)
Translates to: CTTTDASCGCST*TLTIDATPCSS
Trigger: CGACGAGCACGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CAA 90 bp CCAAGGGCCAGACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCGGTCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTAC +
Preference number: 3 (lower is better)
Translates to: PRARHTLHLVHHHRRLLRSSSRW*ASGIVY
Trigger: GTACACTATGCCACTGGCCAACCACCGCGACGACGA...CCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTCTGGCCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR GCA 72 bp ACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACGCTCACCATAGATGCC +
Preference number: 3 (lower is better)
Translates to: TRSTWCTTTDAS*GCSTWTLTIDA
Trigger: GGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 72 bp TGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCGGGTGAGGCCTGGTAC +
Preference number: 3 (lower is better)
Translates to: CHAVLVVAVVGQ*HSVHGAGEAWY
Trigger: GTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CAA 90 bp CACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGTCAGTGGCTGCCAGTaGAGGGACACCTGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: HTLHLVHHHRRLLRVLHVVSGCQ*RDTCLF
Trigger: GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGAC...CACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
3UTR CCA 72 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTG +
Preference number: 3 (lower is better)
Translates to: LTIDATPCSSSR*LASGIVYTERV
Trigger: CACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
3UTR-3UTR CAA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACGTCAGTGGCTGCCAGTaGAGGGACACCTGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHVSGCQ*RDTCLF
Trigger: GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGAC...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR TCA 72 bp AGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTaGCAGATCAAGGGACACAGGACCGGGGCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: RQRSGFTHTPPL*QIKGHRTGALP
Trigger: TGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
3UTR-3UTR CAA 90 bp ATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACGTCAGTGGCTGCCAGTaGAGGGACACCTGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: IDATPCSSSRWLASGIVYVSGCQ*RDTCLF
Trigger: GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGAC...GTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCTGGCTCCGTGCGGTaGAGCCTGGTACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAGSVR*SLVPGG
Trigger: CCCGCCGGGTACCAGGCTGCACCGCACGGAGCCAGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCGGGCACTGCTGGATaGGGCAGCCGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPGTAG*GSRCPS
Trigger: GCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGATAGGGCCAGCGGGTaGCCGGGCCAGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEADRASG*PGQVAQ
Trigger: CTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCATTCCGCAGCCCGTaGGCCGGCTCGGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAFRSP*AGSEAR
Trigger: CCGGGCTTCCGAGCCGGCCCACGGGCTGCGGAATGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGTGCGGCTGGTGCGTaGGTGCGAATCCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGAAGA*VRIPGG
Trigger: GCCGCCCGGGATTCGCACCCACGCACCAGCCGCACC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGGTGCCCTGGGGGCTaGGCCGGAAGCCAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGCPGG*AGSQSR
Trigger: GCGACTCTGGCTTCCGGCTCAGCCCCCAGGGCACCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGGCAGCAGACCTCCTaGGTCCGGAGCCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRQQTS*VRSPGS
Trigger: GCTGCCCGGGCTCCGGACGCAGGAGGTCTGCTGCCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCACTCGTTCACGTCTaGGCAGGGCCCGGGCCGACC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAALVHV*AGPGPT
Trigger: GGTCGGCCCGGGCCCTGCGCAGACGTGAACGAGTGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGATGCGGCAGCCGCTaGCCCAGCCCTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGCGSR*PSPHPQ
Trigger: CTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCCGGGCACTGCTGGATaGGGCAGCCGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPPGTAG*GSRCPS
Trigger: GCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGATAGGGCCAGCGGGTaGCCGGGCCAGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSDRASG*PGQVAQ
Trigger: CTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCGGGCGCACAGTGGTaGGGCTGGTGCGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSAGAQW*GWCVGA
Trigger: CGCACCCACGCACCAGCCGCACCACTGTGCGCCCGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCATTCCGCAGCCCGTaGGCCGGCTCGGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPAFRSP*AGSEAR
Trigger: CCGGGCTTCCGAGCCGGCCCACGGGCTGCGGAATGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCCGTGCGGTGCAGCCTaGTACCCGGCGGGGCACACG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSPCGAA*YPAGHT
Trigger: CGTGTGCCCCGCCGGGTACCAGGCTGCACCGCACGG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCCTCGGGGCCCGCGTaGTACCCAGGATCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPSGPA*YPGSQS
Trigger: GGACTGCGATCCTGGGTACCACGCGGGCCCCGAGGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCAGGGGTGGCGGAGGTaGCCTGGCGGGCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSQGWRR*PGGQNG
Trigger: CCCGTTCTGCCCGCCAGGCCACCTCCGCCACCCCTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGTGCCCGGGCACTGCTaGATGCGGCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPVPGHC*MRQPLP
Trigger: GGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCAC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGTGCGGCTGGTGCGTaGGTGCGAATCCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGAAGA*VRIPGG
Trigger: GCCGCCCGGGATTCGCACCCACGCACCAGCCGCACC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTGTACACGGAGCGGGTaGGGCCTGGTACAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEACTRSG*GLVQPG
Trigger: CCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGCACACGACCGGGGTaGAGCGCACGCGGAGACGCT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRTRPG*SARGDA
Trigger: AGCGTCTCCGCGTGCGCTTCACCCCGGTCGTGTGCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCCGCGGCGCGCTCTGTaGCAACACCGTGTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPPRRAL*QHRVGR
Trigger: GCGCCCTACACGGTGTTGGCACAGAGCGCGCCGCGG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCCGCCGCGCGTGTTTaGACACTCGCCGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPAARV*TLAVLA
Trigger: TGCCAGCACGGCGAGTGTGCAAACACGCGCGGCGGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCACATCGTCACAGGTaGCCTCGGGGCCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPHRHR*PRGPRG
Trigger: ACCACGCGGGCCCCGAGGGCACCTGTGACGATGTGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGAACGGGGCTAGCAGGTaGCTGGGGCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEANGASR*LGLRAW
Trigger: CCAGGCTCGCAGCCCCAGGCACCTGCTAGCCCCGTT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCGGGCACTGCTGGATaGGGCAGCCGCTGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPGTAG*GSRCPS
Trigger: GCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCGCAGCGGCCGTTGGTaGAGCCGTCCAGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPRSGRW*SRPGSR
Trigger: GCGGGATCCTGGACGGCTGCACCAACGGCCGCTGCG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCGGCTGGTGCGTGGGTaGGAATCCCGGGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARLVRG*ESRAAD
Trigger: ATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCAGTGGTGCGGCTGGTaGGTGGGTGCGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAQWCGW*VGANPG
Trigger: CCCGGGATTCGCACCCACGCACCAGCCGCACCACTG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCGGGCGCACAGTGGTaGGGCTGGTGCGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQAGAQW*GWCVGA
Trigger: CGCACCCACGCACCAGCCGCACCACTGTGCGCCCGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCACACTCGCCGTGCTaGCAGCGCCCGCCAGTCGCG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQAHSPC*QRPPVA
Trigger: CGCGACTGGCGGGCGCTGCCAGCACGGCGAGTGTGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCGTGCGGTGCAGCCTaGTACCCGGCGGGGCACACG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPCGAA*YPAGHT
Trigger: CGTGTGCCCCGCCGGGTACCAGGCTGCACCGCACGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGGCGCCCGGTAGCCTaGCGCGCAGCTGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRRPVA*RAAAAE
Trigger: TTCCGCTGCAGCTGCGCGCCAGGCTACCGGGCGCCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCGACCCGCACAGGGCTaGGCCTCGCTCGCGACATTC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARPAQG*ASLATF
Trigger: GAATGTCGCGAGCGAGGCCCAGCCCTGTGCGGGTCG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCCCTCGGGGCCCGCGTaGTACCCAGGATCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSPSGPA*YPGSQS
Trigger: GGACTGCGATCCTGGGTACCACGCGGGCCCCGAGGG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGAGCCGGGCAGGTTCTaGCACACGGCGTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPEPGRF*HTAWAP
Trigger: CGGTGCCCACGCCGTGTGCCAGAACCTGCCCGGCTC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCAGGGGTGGCGGAGGTaGCCTGGCGGGCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQQGWRR*PGGQNG
Trigger: CCCGTTCTGCCCGCCAGGCCACCTCCGCCACCCCTG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGCTCAGGTCTCCACTaGGCGCCAGGTAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGSGLH*APGSPG
Trigger: GCCGGGGCTACCTGGCGCCCAGTGGAGACCTGAGCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGCTCAGGTCTCCACTaGGCGCCAGGTAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGSGLH*APGSPG
Trigger: GCCGGGGCTACCTGGCGCCCAGTGGAGACCTGAGCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGCTCTGGCTCTCGTTaGAGACGCAGCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGSGSR*RRSGAA
Trigger: CGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCGGTCCAGCCGAGGGTaGCTGCACACGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARSSRG*LHTRSA
Trigger: GGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGCGAAGGGCCCAGGTaGCGGTGGGTAGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGEGPR*RWVGVV
Trigger: TACGACCCCTACCCACCGCCACCTGGGCCCTTCGCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCACGCAGCGGCCGTTaGTGCAGCCGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAARSGR*CSRPGS
Trigger: GGATCCTGGACGGCTGCACCAACGGCCGCTGCGTGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGTGCGGCTGGTGCGTaGGTGCGAATCCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGAAGA*VRIPGG
Trigger: GCCGCCCGGGATTCGCACCCACGCACCAGCCGCACC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTTCACATCCACGCAGTaGCGCCCATCCCGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAFTSTQ*RPSRAP
Trigger: GGGGGCACGGGATGGGCGTCACTGCGTGGATGTGAA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGACAGGACCGGGGCCTTaGCAGCGGGGGCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQTGPGP*QRGHAV
Trigger: CACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPDASCG*STWTLT
Trigger: GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTTDAS*GCSTWT
Trigger: CGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGACACGCTCCACCTGGTaGACCACCACCGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEATRSTW*TTTDAS
Trigger: GGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCGCAGACCTGGGGGTTaGGCTGACACATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARRPGG*ADTCRR
Trigger: CCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCGCTGGGCCGGGAAATaGAGCGTCCTGGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPRWAGK*SVLGRR
Trigger: TCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGGCAGCTGGCTCCGTaGGGTGCAGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPWQLAP*GAAWYP
Trigger: CGGGTACCAGGCTGCACCGCACGGAGCCAGCTGCCA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGAGTTCTCACAGCGCTaGGACCCGCACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAEFSQR*DPHRAG
Trigger: CCCAGCCCTGTGCGGGTCGCAGCGCTGTGAGAACTC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGTCACAGGCTGGTGTaGAGCGGTAGGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGHRLV*SGRSQG
Trigger: CCCCTGGCTCCTACCGCTGCACACCAGCCTGTGACC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGTGACGCCCATCCCGTaGCCCCTCGTAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAVTPIP*PLVTLV
Trigger: GACCAGGGTTACGAGGGGGCACGGGATGGGCGTCAC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTCGGTGCCCGGGCACTaGTGGATGCGGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSVPGH*WMRQPL
Trigger: CAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGAGACGCAGCGGCGCTaGGAGCCATCCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAETQRR*EPSSTS
Trigger: ACTGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGCAGCGGCCGTTGGTaGAGCCGTCCAGGATCCCGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRSGRW*SRPGSR
Trigger: GCGGGATCCTGGACGGCTGCACCAACGGCCGCTGCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGATCCCGGGCGGCAGATaGAGCGGAAGGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAIPGGR*SGRSHP
Trigger: CGGATGGCTCCTTCCGCTGCATCTGCCGCCCGGGAT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCAGTGGTGCGGCTGGTaGGTGGGTGCGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSQWCGW*VGANPG
Trigger: CCCGGGATTCGCACCCACGCACCAGCCGCACCACTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAAGCGGGCTGCAGGATaGGCGGCAGGGGCCCCGAGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQKRAAG*AAGAPS
Trigger: ACTCGGGGCCCCTGCCGCGCATCCTGCAGCCCGCTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTGGAGGCGGGAGCAGTaGAGGGCGTCGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAWRREQ*RASQLP
Trigger: TGGAAGCTGCGACGCCCTGCACTGCTCCCGCCTCCA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGCTGCGGCCCTAGCTaGGCCAGCAGCACCAATAGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGCGPS*ASSTNS
Trigger: GCTATTGGTGCTGCTGGCGCAGCTAGGGCCGCAGCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCTGGCCCAGGGGTCTaGTGTTGTAGCGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPGPGV*CCSGGR
Trigger: CCGACCTCCGCTACAACACCAGACCCCTGGGCCAGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCGGGGCTCCAGGCGATaGGTGGGCAGAAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARGSRR*VGRKPA
Trigger: TGCAGGCTTTCTGCCCACCCATCGCCTGGAGCCCCG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGACCCGCACAGGGCTaGGCCTCGCTCGCGACATTC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRPAQG*ASLATF
Trigger: GAATGTCGCGAGCGAGGCCCAGCCCTGTGCGGGTCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCCTCGGGGCCCGCGTaGTACCCAGGATCGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPSGPA*YPGSQS
Trigger: GGACTGCGATCCTGGGTACCACGCGGGCCCCGAGGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCTGGCATCCGCCCCCTaGCGTGGGCTGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLASAP*RGLIAR
Trigger: CCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGGCTAGCAGGTGCCTaGGGCTGCGAGCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGLAGA*GCEPGN
Trigger: GTTCCCAGGCTCGCAGCCCCAGGCACCTGCTAGCCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGCTCTGGCTCTCGTTaGAGACGCAGCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGSGSR*RRSGAA
Trigger: CGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGGTCCAGCCGAGGGTaGCTGCACACGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRSSRG*LHTRSA
Trigger: GGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGCGAAGGGCCCAGGTaGCGGTGGGTAGGGGTCGTA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGEGPR*RWVGVV
Trigger: TACGACCCCTACCCACCGCCACCTGGGCCCTTCGCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCACGCAGCGGCCGTTaGTGCAGCCGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSARSGR*CSRPGS
Trigger: GGATCCTGGACGGCTGCACCAACGGCCGCTGCGTGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGACCACGACATCAGTaGGAGGCGCTGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGPRHQ*EALVEA
Trigger: CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp CGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGTGTACACGGAGCGGGTaGGGCCTGGTACAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGPGARGVQLAELASEVRCTRSG*GLVQPG
Trigger: CCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACA...CCGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCACGAGGCTGGCTGAGTaGCACTCGGGGTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSTRLAE*HSGWLL
Trigger: CAGGAGCCACCCCGAGTGTCACTCAGCCAGCCTCGT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACCTGGGGGTTGCGCTaGCACATGCCGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTWGLR*HMPEEG
Trigger: TCCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGAGGAGCCGTCAGTGTTaGGGCACTCGCCGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEARSRQC*GTRREG
Trigger: TCCCTCACGGCGAGTGCCTCAACACTGACGGCTCCT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGAAGCAACGGCAGGTaGAGCCTTCGGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRSNGR*SLRGRA
Trigger: TGCGCGTCCCCGAAGGCTTCACCTGCCGTTGCTTCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCACAGGACCGGGGCCTTaGCAGCGGGGGCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASEVRGTEAAVRLHAHTATGPGP*QRGHAV
Trigger: CACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGT...GGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQDASCG*STWTLT
Trigger: GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACC +
Preference number: 4 (lower is better)
Translates to: RGPGARGVQLAELASEVRDASCG*STWTLT
Trigger: GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTC...CCGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp CCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACG +
Preference number: 4 (lower is better)
Translates to: PGAGRPRSATGRTCQRSPTTDAS*GCSTWT
Trigger: CGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT...CGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACACGCTCCACCTGGTaGACCACCACCGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTRSTW*TTTDAS
Trigger: GGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTTTGCACACTCGCCGTaGTGGCAGCGCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPFAHSP*WQRPPV
Trigger: GACTGGCGGGCGCTGCCAGCACGGCGAGTGTGCAAA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGTGGGCAGAAAGCCTaGAGATGGCCGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGGQKA*RWPRGG
Trigger: GCCACCTCTCGGCCATCTGCAGGCTTTCTGCCCACC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGCAGACCTGGGGGTTaGGCTGACACATGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRRPGG*ADTCRR
Trigger: CCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGAGTTCTCACAGCGCTaGGACCCGCACAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSEFSQR*DPHRAG
Trigger: CCCAGCCCTGTGCGGGTCGCAGCGCTGTGAGAACTC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCACATCGTCACAGGTaGCCTCGGGGCCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPHRHR*PRGPRG
Trigger: ACCACGCGGGCCCCGAGGGCACCTGTGACGATGTGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGTCACAGGCTGGTGTaGAGCGGTAGGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGHRLV*SGRSQG
Trigger: CCCCTGGCTCCTACCGCTGCACACCAGCCTGTGACC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAACGGGGCTAGCAGGTaGCTGGGGCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQNGASR*LGLRAW
Trigger: CCAGGCTCGCAGCCCCAGGCACCTGCTAGCCCCGTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCAGCCGAGGGTGGCTaGACACGAGGTCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPAEGG*TRGQPP
Trigger: TGGGGGCTGACCTCGTGTGCAGCCACCCTCGGCTGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGGCTGGTGCGTGGGTaGGAATCCCGGGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRLVRG*ESRAAD
Trigger: ATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCAGTGGTGCGGCTGGTaGGTGGGTGCGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQQWCGW*VGANPG
Trigger: CCCGGGATTCGCACCCACGCACCAGCCGCACCACTG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGGAGGCGGGAGCAGTaGAGGGCGTCGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPWRREQ*RASQLP
Trigger: TGGAAGCTGCGACGCCCTGCACTGCTCCCGCCTCCA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp GCCGGGGCCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: AGAGGRAPEECNWQNLPACGCST*TLTIDA
Trigger: GGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCA...CGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGGCCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGACACACGCTCCACCTaGTGCACCACCACCGACGCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSDTRST*CTTTDA
Trigger: GGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCCTGGCCCAGGGGTCTaGTGTTGTAGCGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSPGPGV*CCSGGR
Trigger: CCGACCTCCGCTACAACACCAGACCCCTGGGCCAGG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGGCCGAGAGGTGGCTaGCAGGGTACGAGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSWPRGG*QGTRLA
Trigger: AGCCAGCCTCGTACCCTGCCAGCCACCTCTCGGCCA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCAGATGGCCGAGAGGTaGCTGGCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAQMAER*LAGYEA
Trigger: AGCCTCGTACCCTGCCAGCCACCTCTCGGCCATCTG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCGGGGCTCCAGGCGATaGGTGGGCAGAAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPRGSRR*VGRKPA
Trigger: TGCAGGCTTTCTGCCCACCCATCGCCTGGAGCCCCG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAAATGCAGCGTCCTaGGCCGCAGACCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGNAAS*AADLGV
Trigger: AACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCGCAGGTGTAGCCGCTaGGCCGGGAAATGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPRRCSR*AGKCSV
Trigger: GACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCATGCATCGGGTGCCCTaGGGGCTGAGCCGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPMHRVP*GLSRKP
Trigger: TGGCTTCCGGCTCAGCCCCCAGGGCACCCGATGCAT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCCAGGGTCACAGGCTaGTGTGCAGCGGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPARVTG*CAAVGA
Trigger: GGCTCCTACCGCTGCACACCAGCCTGTGACCCTGGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCATTCGTCCACATCCTaGCATCCGCCCCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAHSSTS*HPPPGV
Trigger: CACGCCAGGGGGCGGATGCCAGGATGTGGACGAATG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTTCTGGCACACGGCGTaGGCACCGCAGAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSFWHTA*APQKDR
Trigger: CCGGTCCTTCTGCGGTGCCCACGCCGTGTGCCAGAA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCTGGGGCTGCGAGCCTaGGAACGTGCCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEALGLRA*ERASRS
Trigger: ACTTCTGCTGGCACGTTCCCAGGCTCGCAGCCCCAG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCTAGCAGGTGCCTaGGGCTGCGAGCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGLAGA*GCEPGN
Trigger: GTTCCCAGGCTCGCAGCCCCAGGCACCTGCTAGCCC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCCATCCAGCACCAGTaGGGGCTCGCAGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAIQHQ*GLAGTV
Trigger: CACTGTACCTGCGAGCCCCCACTGGTGCTGGATGGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCACAGTGGTGCGGCTaGTGCGTGGGTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPAQWCG*CVGANP
Trigger: GGGATTCGCACCCACGCACCAGCCGCACCACTGTGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCACAGTGGTGCGGCTaGTGCGTGGGTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSAQWCG*CVGANP
Trigger: GGGATTCGCACCCACGCACCAGCCGCACCACTGTGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCATCAGTGGGAGGCGCTaGTGGAGGCGGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPISGRR*WRREQC
Trigger: GCACTGCTCCCGCCTCCACCAGCGCCTCCCACTGAT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCATCAGTGGGAGGCGCTaGTGGAGGCGGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSISGRR*WRREQC
Trigger: GCACTGCTCCCGCCTCCACCAGCGCCTCCCACTGAT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGACCACGACATCAGTaGGAGGCGCTGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGPRHQ*EALVEA
Trigger: CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGACGAGGCTGGCTGAGTaGCACTCGGGGTGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQTRLAE*HSGWLL
Trigger: CAGGAGCCACCCCGAGTGTCACTCAGCCAGCCTCGT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCCGGAGGAGGGACCTaGTTCAGGAATCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAGGGT*FRNLRT
Trigger: GGTCCTGAGATTCCTGAATCAGGTCCCTCCTCCGGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGGTGCCCTGGGGGCTaGGCCGGAAGCCAGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGCPGG*AGSQSR
Trigger: GCGACTCTGGCTTCCGGCTCAGCCCCCAGGGCACCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTCACATCCACGCAGTaGCGCCCATCCCGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQFTSTQ*RPSRAP
Trigger: GGGGGCACGGGATGGGCGTCACTGCGTGGATGTGAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAAGAGCCCACAGTGTTaGCACAGCGGCCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSKSPQC*HSGRPH
Trigger: GTGAGGGCGGCCGCTGTGTCAACACTGTGGGCTCTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGCCTCGAAGTCATCTaGGTCCTGCGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGLEVI*VLRRAE
Trigger: CTCTGCCCTGCGCAGGACTCAGATGACTTCGAGGCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSAPLGA*TLFGLA
Trigger: TGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCTGGGACTGGGCACTaGAGGCACTGGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSAGTGH*RHWVQA
Trigger: TGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCCAGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGATAGATGCCACGCCGTaGTCGTCGTCGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAIDATP*SSSRWL
Trigger: CAACCACCGCGACGACGAGCACGGCGTGGCATCTAT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGACGCTCACCATAGATaGCACGCCGTGCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEADAHHR*HAVLVV
Trigger: GACGACGAGCACGGCGTGGCATCTATGGTGAGCGTC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGGCAGCAGACCTCCTaGGTCCGGAGCCCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRQQTS*VRSPGS
Trigger: GCTGCCCGGGCTCCGGACGCAGGAGGTCTGCTGCCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTTGCACACTCGCCGTaGTGGCAGCGCCCGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQFAHSP*WQRPPV
Trigger: GACTGGCGGGCGCTGCCAGCACGGCGAGTGTGCAAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCTGGCTCCGTGCGGTaGAGCCTGGTACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAGSVR*SLVPGG
Trigger: CCCGCCGGGTACCAGGCTGCACCGCACGGAGCCAGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACTCAGCTGTCTCGGTaGCCGGGCACTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTQLSR*PGTAGC
Trigger: GCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGAGACGCAGCGGCGCTaGGAGCCATCCAGCACCAGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQETQRR*EPSSTS
Trigger: ACTGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGAAGTCATCTGAGTCCTaGGCAGGGCAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAKSSES*AGQRAQ
Trigger: CTGCGCCCTCTGCCCTGCGCAGGACTCAGATGACTT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCATGTCGAAGCGGGGTaGCCCATAAGGAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSHVEAG*PIRSLP
Trigger: CGGGAGGCTCCTTATGGGGCACCCCGCTTCGACATG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGATAGGGCCAGCGGGTaGCCGGGCCAGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQDRASG*PGQVAQ
Trigger: CTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTGTCAACGCAGGCCATaGGGGTCATGTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEACQRRP*GSCPGG
Trigger: ACCGCCTGGACATGACCCGCATGGCCTGCGTTGACA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCGGGCGCACAGTGGTaGGGCTGGTGCGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAGAQW*GWCVGA
Trigger: CGCACCCACGCACCAGCCGCACCACTGTGCGCCCGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCGGGCGCACAGTGGTaGGGCTGGTGCGTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAGAQW*GWCVGA
Trigger: CGCACCCACGCACCAGCCGCACCACTGTGCGCCCGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCAGGCAACGCAGGCCATaGGGGTCATGTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPRQRRP*GSCPGG
Trigger: ACCGCCTGGACATGACCCGCATGGCCTGCGTTGCCT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPLLLDV*PGQQRQ
Trigger: TTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEACGCST*TLTIDA
Trigger: GGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGACACACGCTCCACCTaGTGCACCACCACCGACGCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQDTRST*CTTTDA
Trigger: GGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCACACTCGCCGTGCTaGCAGCGCCCGCCAGTCGCG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAHSPC*QRPPVA
Trigger: CGCGACTGGCGGGCGCTGCCAGCACGGCGAGTGTGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGCTCCAGGCGATGGGTaGGCAGAAAGCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAAPGDG*AESLQM
Trigger: CATCTGCAGGCTTTCTGCCCACCCATCGCCTGGAGC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGAAATGCAGCGTCCTaGGCCGCAGACCTGGGGGTT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGNAAS*AADLGV
Trigger: AACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTCGGCCACACAGGCCTaGGCTCTGGGTGCATTCATC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEASATQA*ALGAFI
Trigger: GATGAATGCACCCAGAGCCCAGGCCTGTGTGGCCGA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCAGGGCGGCGGCTCCTaGGCACACTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQQGGGS*AHSSTS
Trigger: GGATGTGGATGAGTGTGCCCAGGAGCCGCCGCCCTG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGACAGGTCCTGCACTaGAAGGAGCCGGGCGAGTTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGQVLH*KEPGEF
Trigger: GAACTCGCCCGGCTCCTTCCAGTGCAGGACCTGTCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTCGGTGTTAGTGCAGTaGCCGTGGGGACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEASVLVQ*PWGPQG
Trigger: TCCCTGTGGTCCCCACGGCCACTGCACTAACACCGA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGGCGCCCGGTAGCCTaGCGCGCAGCTGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRRPVA*RAAAAE
Trigger: TTCCGCTGCAGCTGCGCGCCAGGCTACCGGGCGCCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCCAGGGTCACAGGCTaGTGTGCAGCGGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQARVTG*CAAVGA
Trigger: GGCTCCTACCGCTGCACACCAGCCTGTGACCCTGGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQIRPLA*ADSQGH
Trigger: GTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGAT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCATTCGTCCACATCCTaGCATCCGCCCCCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSHSSTS*HPPPGV
Trigger: CACGCCAGGGGGCGGATGCCAGGATGTGGACGAATG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTCTGGCACACGGCGTaGGCACCGCAGAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQFWHTA*APQKDR
Trigger: CCGGTCCTTCTGCGGTGCCCACGCCGTGTGCCAGAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCAGGGGTGGCGGAGGTaGCCTGGCGGGCAGAACGGG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQQGWRR*PGGQNG
Trigger: CCCGTTCTGCCCGCCAGGCCACCTCCGCCACCCCTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGTGCCCGGGCACTGCTaGATGCGGCAGCCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQVPGHC*MRQPLP
Trigger: GGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCAC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGCTGTCCACGCTGGTaGCGTTGCGGGGCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRCPRW*RCGARR
Trigger: CCTGCGCGCCCCGCAACGCCACCAGCGTGGACAGCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEASVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR TCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAAGAGCCCACAGTGTTaGCACAGCGGCCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQKSPQC*HSGRPH
Trigger: GTGAGGGCGGCCGCTGTGTCAACACTGTGGGCTCTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCTCATCACACTCGTTaGTGTCTGCGGAGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPHHTR*CLRRGD
Trigger: GTCTCCCCTCCGCAGACATCAACGAGTGTGATGAGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS-3UTR GCA 90 bp CCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGAGRPRSATGRTCQRSPAPLGA*TLFGLA
Trigger: TGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGC...CGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCAACTGGCAGAACTTaGCAGCGAAGTCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSATGRT*QRSPGD
Trigger: GTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGACGCTCACCATAGATaGCACGCCGTGCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPDAHHR*HAVLVV
Trigger: GACGACGAGCACGGCGTGGCATCTATGGTGAGCGTC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGGAGATGCAGCTGCTaGGGGACGAGTCGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGRCSC*GTSRAE
Trigger: TTCTGCTCGACTCGTCCCGCAGCAGCTGCATCTCCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGTGGGCAGAAAGCCTaGAGATGGCCGAGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGGQKA*RWPRGG
Trigger: GCCACCTCTCGGCCATCTGCAGGCTTTCTGCCCACC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCAGTCCAGGCAGGGATaGTGGGCAAGGGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSQSRQG*WAREAQ
Trigger: CTGAGCTTCCCTTGCCCAGCATCCCTGCCTGGACTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCAGTCCAGGCAGGGATaGTGGGCAAGGGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPQSRQG*WAREAQ
Trigger: CTGAGCTTCCCTTGCCCAGCATCCCTGCCTGGACTG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGCCTGGGCTCTGGGTaGATTCATCCACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGLGSG*IHPHPG
Trigger: GCCAGGATGTGGATGAATGCACCCAGAGCCCAGGCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGCCTGGGCTCTGGGTaGATTCATCCACATCCTGGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGLGSG*IHPHPG
Trigger: GCCAGGATGTGGATGAATGCACCCAGAGCCCAGGCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCTCCTGCCCAGGGCATaGGAGGTGGTTCTCACACTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPLLPRA*EVVLTL
Trigger: GAGTGTGAGAACCACCTCGCATGCCCTGGGCAGGAG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGAGTTCACACACTCCTaGCCAGGGCATGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSEFTHS*PGHARW
Trigger: CCACCTCGCATGCCCTGGGCAGGAGTGTGTGAACTC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGTGCATCTGCCACGGTaGAGGTGGTGGCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPVHLPR*RWWPEG
Trigger: TCCTTCTGGCCACCACCTGCACCGTGGCAGATGCAC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCCACATCAGTGCATCTaGCACGGTGCAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPPHQCI*HGAGGG
Trigger: GCCACCACCTGCACCGTGGCAGATGCACTGATGTGG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGAGGGGCACCCGAACTaGATTCGTCCACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAEGHPN*IRPHQC
Trigger: GCACTGATGTGGACGAATGCAGTTCGGGTGCCCCTC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCACTCGTTCACGTCTaGGCAGGGCCCGGGCCGACC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQALVHV*AGPGPT
Trigger: GGTCGGCCCGGGCCCTGCGCAGACGTGAACGAGTGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGAAAGGTCCTCCTCGCTaGACTCGTCAACGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAKGPPR*TRQRRG
Trigger: GCCTCGACGTTGACGAGTGCAGCGAGGAGGACCTTT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGTCCCGGAGGACAGATaGACTCGAAGGAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQVPEDR*TRRSRR
Trigger: CCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGGAC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGATGCGGCAGCCGCTaGCCCAGCCCTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGCGSR*PSPHPQ
Trigger: CTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGATGCGGCAGCCGCTaGCCCAGCCCTCACCCACAG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGCGSR*PSPHPQ
Trigger: CTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTCGGTGCCCGGGCACTaGTGGATGCGGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSVPGH*WMRQPL
Trigger: CAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGACTCAGCTGTCTCGGTaGCCGGGCACTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQTQLSR*PGTAGC
Trigger: GCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCATGTCGAAGCGGGGTaGCCCATAAGGAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQHVEAG*PIRSLP
Trigger: CGGGAGGCTCCTTATGGGGCACCCCGCTTCGACATG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGTCAACGCAGGCCATaGGGGTCATGTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPCQRRP*GSCPGG
Trigger: ACCGCCTGGACATGACCCGCATGGCCTGCGTTGACA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGTCAACGCAGGCCATaGGGGTCATGTCCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSCQRRP*GSCPGG
Trigger: ACCGCCTGGACATGACCCGCATGGCCTGCGTTGACA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGGTTCAGGCACCGCTaGGGGCCTGCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGFRHR*GPAHFL
Trigger: CAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSCSSSR*LASGIV
Trigger: CACTATGCCACTGGCCAACCACCGCGACGACGAGCA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPCSSSR*LASGIV
Trigger: CACTATGCCACTGGCCAACCACCGCGACGACGAGCA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSCGCST*TLTIDA
Trigger: GGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGCAGGGTACGAGGCTaGCTGAGTGACACTCGGGGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGRVRG*LSDTRG
Trigger: ACCCCGAGTGTCACTCAGCCAGCCTCGTACCCTGCC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTCGGCCACACAGGCCTaGGCTCTGGGTGCATTCATC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSSATQA*ALGAFI
Trigger: GATGAATGCACCCAGAGCCCAGGCCTGTGTGGCCGA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTGGGTTGGAAGCCCATaGGGCAGACACACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAWVGSP*GRHTGS
Trigger: GCTTCCAGTGTGTCTGCCCCATGGGCTTCCAACCCA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGGAGCCAGCAGTGTTaGGTTGGAAGCCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRSQQC*VGSPWG
Trigger: GCCCCATGGGCTTCCAACCCAACACTGCTGGCTCCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCTGCCACGGTGCAGGTaGTGGCCAGAAGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQLPRCR*WPEGQV
Trigger: GACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGTACAGATGCCGCTCTaGCAAAGGTCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAVQMPL*QRSSSL
Trigger: CAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTAC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGAGCCGGGCAGGTTCTaGCACACGGCGTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQEPGRF*HTAWAP
Trigger: CGGTGCCCACGCCGTGTGCCAGAACCTGCCCGGCTC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGAGCCGGGCAGGTTCTaGCACACGGCGTGGGCACCG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSEPGRF*HTAWAP
Trigger: CGGTGCCCACGCCGTGTGCCAGAACCTGCCCGGCTC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCTGGGGCTGCGAGCCTaGGAACGTGCCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQLGLRA*ERASRS
Trigger: ACTTCTGCTGGCACGTTCCCAGGCTCGCAGCCCCAG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCAACTCAGGCCCATATaGGAGGCCCTGGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAQLRPI*EALVRW
Trigger: CCACCTTACCAGGGCCTCCCATATGGGCCTGAGTTG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTGTACACGGAGCGGGTaGGGCCTGGTACAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQCTRSG*GLVQPG
Trigger: CCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGGCCCTTTGGCCTCTaGGATCACGTGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGPFGL*DHVLGD
Trigger: ATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCCGGAGGAGGGACCTaGTTCAGGAATCTCAGGACC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQAGGGT*FRNLRT
Trigger: GGTCCTGAGATTCCTGAATCAGGTCCCTCCTCCGGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTGAGGCACTCGCCGTaGGGGAAGCAGAAATCGCCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQLRHSP*GKQKSP
Trigger: GGGCGATTTCTGCTTCCCTCACGGCGAGTGCCTCAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCCGTGAGGGCACAATaGCTGGTACTCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSAVRAQ*LVLSCL
Trigger: GAGACAGCTGAGTACCAGTCATTGTGCCCTCACGGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCCGTGAGGGCACAATaGCTGGTACTCAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPAVRAQ*LVLSCL
Trigger: GAGACAGCTGAGTACCAGTCATTGTGCCCTCACGGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGTTGCTGCAATAGCATaGGTAGCCCGGGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSVAAIA*VARGRV
Trigger: AACACGGCCCCGGGCTACTCATGCTATTGCAGCAAC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR GCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACACAGGACCGGGGCCTTaGCAGCGGGGGCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHTGPGP*QRGHAV
Trigger: CACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGT...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCAACTGGCAGAACTTaGCAGCGAAGTCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQATGRT*QRSPGD
Trigger: GTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGATAGATGCCACGCCGTaGTCGTCGTCGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQIDATP*SSSRWL
Trigger: CAACCACCGCGACGACGAGCACGGCGTGGCATCTAT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGATAGATGCCACGCCGTaGTCGTCGTCGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PGAGRPRSATGRTCQRSPIDATP*SSSRWL
Trigger: CAACCACCGCGACGACGAGCACGGCGTGGCATCTAT...CGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSTTDAS*GCSTWT
Trigger: CGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTCACGTGTTGGGAGATaGAGCTGCTGCGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSSRVGR*SCCGTS
Trigger: ACTCGTCCCGCAGCAGCTGCATCTCCCAACACGTGA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGTTGCGCTGACACATaGCGGAGGAGGGACCTGATT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGCADT*RRRDLI
Trigger: AATCAGGTCCCTCCTCCGGCATGTGTCAGCGCAACC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGCTGGGCCGGGAAATaGAGCGTCCTGGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRWAGK*SVLGRR
Trigger: TCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTGGCAGCTGGCTCCGTaGGGTGCAGCCTGGTACCCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQWQLAP*GAAWYP
Trigger: CGGGTACCAGGCTGCACCGCACGGAGCCAGCTGCCA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGTGCATCTGCCACGGTaGAGGTGGTGGCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQVHLPR*RWWPEG
Trigger: TCCTTCTGGCCACCACCTGCACCGTGGCAGATGCAC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCACATCAGTGCATCTaGCACGGTGCAGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPHQCI*HGAGGG
Trigger: GCCACCACCTGCACCGTGGCAGATGCACTGATGTGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGAGGGGCACCCGAACTaGATTCGTCCACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPEGHPN*IRPHQC
Trigger: GCACTGATGTGGACGAATGCAGTTCGGGTGCCCCTC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAAAGGTCCTCCTCGCTaGACTCGTCAACGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSKGPPR*TRQRRG
Trigger: GCCTCGACGTTGACGAGTGCAGCGAGGAGGACCTTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCCACATCGTCACAGGTaGCCTCGGGGCCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQPHRHR*PRGPRG
Trigger: ACCACGCGGGCCCCGAGGGCACCTGTGACGATGTGG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCAGGTGCCTGGGGCTaGGAGCCTGGGAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAGAWG*EPGNVP
Trigger: TGGCACGTTCCCAGGCTCGCAGCCCCAGGCACCTGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCAGGTGCCTGGGGCTaGGAGCCTGGGAACGTGCCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAGAWG*EPGNVP
Trigger: TGGCACGTTCCCAGGCTCGCAGCCCCAGGCACCTGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAACGGGGCTAGCAGGTaGCTGGGGCTGCGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSNGASR*LGLRAW
Trigger: CCAGGCTCGCAGCCCCAGGCACCTGCTAGCCCCGTT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCAGGATGTTGTCACATaGATCCGGGGCCGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSQDVVT*IRGRCV
Trigger: GACACAGCGGCCCCGGATGCATGTGACAACATCCTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCAGGATGTTGTCACATaGATCCGGGGCCGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPQDVVT*IRGRCV
Trigger: GACACAGCGGCCCCGGATGCATGTGACAACATCCTG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGTACAGCAGCACTCCTaGCATGTCACATTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAVQQHS*HVTFRA
Trigger: GGCTCGGAATGTGACATGGCAGGAGTGCTGCTGTAC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCACACACGCCACTCTTaGACACCTGGTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAHTRHS*TPGLGR
Trigger: TCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCCAGCCGAGGGTGGCTaGACACGAGGTCAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSPAEGG*TRGQPP
Trigger: TGGGGGCTGACCTCGTGTGCAGCCACCCTCGGCTGG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAAGTCATCTGAGTCCTaGGCAGGGCAGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQKSSES*AGQRAQ
Trigger: CTGCGCCCTCTGCCCTGCGCAGGACTCAGATGACTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGGGGGCGTAGCACATTaGACAGGGCCTCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPGGVAH*TGPRSH
Trigger: ATGACTTCGAGGCCCTGTGCAATGTGCTACGCCCCC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGGCTGGTGCGTGGGTaGGAATCCCGGGCGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRLVRG*ESRAAD
Trigger: ATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCAGTGGTGCGGCTGGTaGGTGGGTGCGAATCCCGGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSQWCGW*VGANPG
Trigger: CCCGGGATTCGCACCCACGCACCAGCCGCACCACTG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCACACTTTTTGGGCTaGCAGCTTCGGACCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPAHFLG*QLRTLQ
Trigger: CTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGLHTF*AGSFGP
Trigger: GGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCTCCAGGCGATGGGTaGGCAGAAAGCCTGCAGATG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQAPGDG*AESLQM
Trigger: CATCTGCAGGCTTTCTGCCCACCCATCGCCTGGAGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCCGTAGGTGCAGGGTaGGGGGCTTCGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAVGAG*GASGTL
Trigger: GAGTGTGCCCGAAGCCCCCCACCCTGCACCTACGGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCCGTAGGTGCAGGGTaGGGGGCTTCGGGCACACTC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAVGAG*GASGTL
Trigger: GAGTGTGCCCGAAGCCCCCCACCCTGCACCTACGGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGCCAGGGCATGCGAGGTaGTTCTCACACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAPGHAR*FSHSST
Trigger: TGTGGATGAGTGTGAGAACCACCTCGCATGCCCTGG...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTCGGTGTTAGTGCAGTaGCCGTGGGGACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSVLVQ*PWGPQG
Trigger: TCCCTGTGGTCCCCACGGCCACTGCACTAACACCGA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGTACAGATGCCGCTCTaGCAAAGGTCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSVQMPL*QRSSSL
Trigger: CAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTAC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGACCCGCACAGGGCTaGGCCTCGCTCGCGACATTC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRPAQG*ASLATF
Trigger: GAATGTCGCGAGCGAGGCCCAGCCCTGTGCGGGTCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCTGGCATCCGCCCCCTaGCGTGGGCTGATAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSLASAP*RGLIAR
Trigger: CCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACTCTTCCGGGCTGTTaGGGCAGACACAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTLPGC*GRHRGR
Trigger: CCTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCCAGCAGAAGTTCGTaGGGGAACACAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPASRSS*GNTASS
Trigger: ACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGGCTAGCAGGTGCCTaGGGCTGCGAGCCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGLAGA*GCEPGN
Trigger: GTTCCCAGGCTCGCAGCCCCAGGCACCTGCTAGCCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGCTCTGGCTCTCGTTaGAGACGCAGCGGCGCTGCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGSGSR*RRSGAA
Trigger: CGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGGTCCAGCCGAGGGTaGCTGCACACGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRSSRG*LHTRSA
Trigger: GGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAGCACTCTGTGTAGGTaGCCTGACGGTCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSTLCR*PDGPAE
Trigger: CTCGGCTGGACCGTCAGGCCACCTACACAGAGTGCT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCAACTCAGGCCCATATaGGAGGCCCTGGTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSQLRPI*EALVRW
Trigger: CCACCTTACCAGGGCCTCCCATATGGGCCTGAGTTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCACGCAGCGGCCGTTaGTGCAGCCGTCCAGGATCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQARSGR*CSRPGS
Trigger: GGATCCTGGACGGCTGCACCAACGGCCGCTGCGTGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCACACACCGCCATTGTaGCAGATCAAGGGACACAGG +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPHTPPL*QIKGHR
Trigger: CCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACTGTACACGGAGCGGGTaGGGCCTGGTACAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHCTRSG*GLVQPG
Trigger: CCCCGGCTGTACCAGGCCTCACCCGCTCCGTGTACA...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGACCTGGGGGTTGCGCTaGCACATGCCGGAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQTWGLR*HMPEEG
Trigger: TCCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTTCACATCCACGCAGTaGCGCCCATCCCGTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQFTSTQ*RPSRAP
Trigger: GGGGGCACGGGATGGGCGTCACTGCGTGGATGTGAA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCTCTC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSWSRKS*HSSTSL
Trigger: GAGAGACGTGGACGAATGTCAGCTCTTCCGAGACCA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPWSRKS*HSSTSL
Trigger: GAGAGACGTGGACGAATGTCAGCTCTTCCGAGACCA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGAAGCAACGGCAGGTaGAGCCTTCGGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRSNGR*SLRGRA
Trigger: TGCGCGTCCCCGAAGGCTTCACCTGCCGTTGCTTCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGAAGCAACGGCAGGTaGAGCCTTCGGGGACGCGCA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRSNGR*SLRGRA
Trigger: TGCGCGTCCCCGAAGGCTTCACCTGCCGTTGCTTCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp TCCTCCCAAGGGCCAGACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCGCTGGGACTGGGCACTaGAGGCACTGGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSQGPDTRSTWCTTTDASAGTGH*RHWVQA
Trigger: TGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCCAGC...GGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTCTGGCCCTTGGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR GCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACGCCTCCTGCGGGTaGTCCACGTGGACGCTCACC +
Preference number: 4 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCDASCG*STWTLT
Trigger: GGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTC...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCCGCGGCGCGCTCTGTaGCAACACCGTGTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFPRRAL*QHRVGR
Trigger: GCGCCCTACACGGTGTTGGCACAGAGCGCGCCGCGG...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTCACGTGTTGGGAGATaGAGCTGCTGCGGGACGAGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSRVGR*SCCGTS
Trigger: ACTCGTCCCGCAGCAGCTGCATCTCCCAACACGTGA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGATTCGTCCACATCAATaGATCGGGTGCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQIRPHQ*IGCPGG
Trigger: GCCCCCAGGGCACCCGATGCATTGATGTGGACGAAT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAAAGGTCCTCCTCGCTaGACTCGTCAACGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQKGPPR*TRQRRG
Trigger: GCCTCGACGTTGACGAGTGCAGCGAGGAGGACCTTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGTCACAGGCTGGTGTaGAGCGGTAGGAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGHRLV*SGRSQG
Trigger: CCCCTGGCTCCTACCGCTGCACACCAGCCTGTGACC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTGACGCCCATCCCGTaGCCCCTCGTAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVTPIP*PLVTLV
Trigger: GACCAGGGTTACGAGGGGGCACGGGATGGGCGTCAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCACACACGCCACTCTTaGACACCTGGTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSHTRHS*TPGLGR
Trigger: TCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGGGCGTAGCACATTaGACAGGGCCTCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGGVAH*TGPRSH
Trigger: ATGACTTCGAGGCCCTGTGCAATGTGCTACGCCCCC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCATCCCGGGCGGCAGATaGAGCGGAAGGAGCCATCCG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSIPGGR*SGRSHP
Trigger: CGGATGGCTCCTTCCGCTGCATCTGCCGCCCGGGAT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTGGAGGCGGGAGCAGTaGAGGGCGTCGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQWRREQ*RASQLP
Trigger: TGGAAGCTGCGACGCCCTGCACTGCTCCCGCCTCCA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR GCA 90 bp TGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCGGCAGCTTCGGACCCTaGAGAAGGCTCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: CQRSPGDRGSGQASRTHRGSFGP*RRLGCS
Trigger: GCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCC...GCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CCAAGGGCCAGACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCGGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: PRARHTLHLVHHHRRLLRGLHTF*AGSFGP
Trigger: GGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCC...CCGCAGGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTCTGGCCCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR CCA 90 bp CCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGACGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: PGDRGSGQASRTHRHCDRRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...TCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTCGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCTCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp TTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGTCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPAKSGGQRQRSGFTHTPSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...CGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp GCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCCTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASEVRGTEAAVRLHAHTALLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...GGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp TGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CQRSPGDRGSGQASRTHRRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...GCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGAGRPRSATGRTCQRSPASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...CGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: RGPGARGVQLAELASEVRPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...CCGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTGGACAAGGTCCATCTaGGGCGCTCACTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSWTRSI*GAHSFG
Trigger: TCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGGAAGCAGGGCCCTTTaGCCTCTGAGATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSGSRAL*PLRSRV
Trigger: AACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGCAGGTGTAGCCGCTaGGCCGGGAAATGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRRCSR*AGKCSV
Trigger: GACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGATGCATCGGGTGCCCTaGGGGCTGAGCCGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQMHRVP*GLSRKP
Trigger: TGGCTTCCGGCTCAGCCCCCAGGGCACCCGATGCAT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCCACATCCTGGCAGCTaGCTCCGTGCGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSPHPGS*LRAVQP
Trigger: AGGCTGCACCGCACGGAGCCAGCTGCCAGGATGTGG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCCACATCCTGGCAGCTaGCTCCGTGCGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQPHPGS*LRAVQP
Trigger: AGGCTGCACCGCACGGAGCCAGCTGCCAGGATGTGG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCACAGGCCTGGGCTCTaGGTGCATTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQHRPGL*VHSSTS
Trigger: GGATGTGGATGAATGCACCCAGAGCCCAGGCCTGTG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCAGGGCGGCGGCTCCTaGGCACACTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQQGGGS*AHSSTS
Trigger: GGATGTGGATGAGTGTGCCCAGGAGCCGCCGCCCTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTGGGTTGGAAGCCCATaGGGCAGACACACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQWVGSP*GRHTGS
Trigger: GCTTCCAGTGTGTCTGCCCCATGGGCTTCCAACCCA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCCAGGGCATGCGAGGTaGTTCTCACACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSPGHAR*FSHSST
Trigger: TGTGGATGAGTGTGAGAACCACCTCGCATGCCCTGG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGTGTTCTCACAACGCTaGGCTCCACAAATCTCGGGA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAVFSQR*APQISG
Trigger: TCCCGAGATTTGTGGAGCCCAGCGTTGTGAGAACAC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCCAGGGTCACAGGCTaGTGTGCAGCGGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQARVTG*CAAVGA
Trigger: GGCTCCTACCGCTGCACACCAGCCTGTGACCCTGGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSIRPLA*ADSQGH
Trigger: GTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGAT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGACTCTTCCGGGCTGTTaGGGCAGACACAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQTLPGC*GRHRGR
Trigger: CCTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQHSVQS*GQTLPG
Trigger: GCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCCAGCAGAAGTTCGTaGGGGAACACAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQASRSS*GNTASS
Trigger: ACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTTGTCATCGAGGCTCTaGCTCTCGTTGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLSSRL*LSLETQ
Trigger: CTGCGTCTCCAACGAGAGCCAGAGCCTCGATGACAA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCATCGTCCTCAAAGTCTaGCATGTCGAAGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSIVLKV*HVEAGC
Trigger: GCACCCCGCTTCGACATGCCAGACTTTGAGGACGAT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCACAGTGGTGCGGCTaGTGCGTGGGTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSAQWCG*CVGANP
Trigger: GGGATTCGCACCCACGCACCAGCCGCACCACTGTGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCACAGTGGTGCGGCTaGTGCGTGGGTGCGAATCCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAQWCG*CVGANP
Trigger: GGGATTCGCACCCACGCACCAGCCGCACCACTGTGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGATCAGTGGGAGGCGCTaGTGGAGGCGGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQISGRR*WRREQC
Trigger: GCACTGCTCCCGCCTCCACCAGCGCCTCCCACTGAT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCATCAGTGGGAGGCGCTaGTGGAGGCGGGAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSISGRR*WRREQC
Trigger: GCACTGCTCCCGCCTCCACCAGCGCCTCCCACTGAT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGACCACGACATCAGTaGGAGGCGCTGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGPRHQ*EALVEA
Trigger: CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAGGAGCCGTCAGTGTTaGGGCACTCGCCGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRSRQC*GTRREG
Trigger: TCCCTCACGGCGAGTGCCTCAACACTGACGGCTCCT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAAGAGCCCACAGTGTTaGCACAGCGGCCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSKSPQC*HSGRPH
Trigger: GTGAGGGCGGCCGCTGTGTCAACACTGTGGGCTCTT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGCCTCGAAGTCATCTaGGTCCTGCGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGLEVI*VLRRAE
Trigger: CTCTGCCCTGCGCAGGACTCAGATGACTTCGAGGCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGCCTCGAAGTCATCTaGGTCCTGCGCAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGLEVI*VLRRAE
Trigger: CTCTGCCCTGCGCAGGACTCAGATGACTTCGAGGCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCACAGGACCGGGGCCTTaGCAGCGGGGGCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: SRTHRHCDRSRDTGPGPCTGPGP*QRGHAV
Trigger: CACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGT...GCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACACACGCTCCACCTGGTaGACCACCACCGACGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHTRSTW*TTTDAS
Trigger: GGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGT...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAGCCAGGCAGGTTCTTaGAGGCCCCTCGGCCACACA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSQAGS*RPLGHT
Trigger: TGTGTGGCCGAGGGGCCTGCAAGAACCTGCCTGGCT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCATTCGTCCACATCAGTaGATCTGCCACGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGPVHIRISGLQDARQGPIRPHQ*ICHGAG
Trigger: ACCTGCACCGTGGCAGATGCACTGATGTGGACGAAT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGGTGTTGGTACAGATaGCGCTCTGGCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRCWYR*RSGKGP
Trigger: AGGACCTTTGCCAGAGCGGCATCTGTACCAACACCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTCCCGGAGGACAGATaGACTCGAAGGAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVPEDR*TRRSRR
Trigger: CCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGGAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGTCCCGGAGGACAGATaGACTCGAAGGAGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQVPEDR*TRRSRR
Trigger: CCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGGAC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGACTCAGCTGTCTCGGTaGCCGGGCACTGCTGGATGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQTQLSR*PGTAGC
Trigger: GCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCACTCGTCATTGTCGATaGACTCCAGCCGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSTRHCR*TPAAVC
Trigger: ACACACAGCGGCTGGAGTGCATCGACAATGACGAGT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GTGCTCCACGTGGACGCTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAA +
Preference number: 4 (lower is better)
Translates to: VLHVDAHHRCHAVLVVAVLLLDV*PGQQRQ
Trigger: TTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAG...CACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAGCGTCCACGTGGAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp ACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAA +
Preference number: 4 (lower is better)
Translates to: TPCSSSRWLASGIVYTERLLLDV*PGQQRQ
Trigger: TTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAG...CCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATACGCTGGGGCTGGGACTaGGCACTGCAGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LTIDATPCSSSRWLASGIRWGWD*ALQALG
Trigger: ACCCAGTGCCTGCAGTGCCCAGTCCCAGCCCCAGCG...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACTCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHSSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CCA 90 bp GCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ASEVRGTEAAVRLHAHTAASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...GGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp TGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 4 (lower is better)
Translates to: CQRSPGDRGSGQASRTHRAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...GCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp TCCTCCCAAGGGCCAGACACACGCTCCACCTGGTGCACCACCACCGACGCCTCCTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTG +
Preference number: 4 (lower is better)
Translates to: SSQGPDTRSTWCTTTDASCSSSR*LASGIV
Trigger: CACTATGCCACTGGCCAACCACCGCGACGACGAGCA...GGAGGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTCTGGCCCTTGGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTGGACAAGGTCCATCTaGGGCGCTCACTCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQWTRSI*GAHSFG
Trigger: TCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCAGATGGCCGAGAGGTaGCTGGCAGGGTACGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSQMAER*LAGYEA
Trigger: AGCCTCGTACCCTGCCAGCCACCTCTCGGCCATCTG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGGAGCCAGCAGTGTTaGGTTGGAAGCCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRSQQC*VGSPWG
Trigger: GCCCCATGGGCTTCCAACCCAACACTGCTGGCTCCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCTGCCACGGTGCAGGTaGTGGCCAGAAGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQLPRCR*WPEGQV
Trigger: GACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCTGGGGCTGCGAGCCTaGGAACGTGCCAGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQLGLRA*ERASRS
Trigger: ACTTCTGCTGGCACGTTCCCAGGCTCGCAGCCCCAG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCCATCCAGCACCAGTaGGGGCTCGCAGGTACAGTG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAIQHQ*GLAGTV
Trigger: CACTGTACCTGCGAGCCCCCACTGGTGCTGGATGGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTGTCATCGAGGCTCTaGCTCTCGTTGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQLSSRL*LSLETQ
Trigger: CTGCGTCTCCAACGAGAGCCAGAGCCTCGATGACAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGATCGTCCTCAAAGTCTaGCATGTCGAAGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQIVLKV*HVEAGC
Trigger: GCACCCCGCTTCGACATGCCAGACTTTGAGGACGAT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCTTGAGGCACTCGCCGTaGGGGAAGCAGAAATCGCCC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSLRHSP*GKQKSP
Trigger: GGGCGATTTCTGCTTCCCTCACGGCGAGTGCCTCAA...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGCAGCTTCGGACCCTaGAGAAGGCTTCGGAGACAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGSFGP*RRLRRQ
Trigger: CTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGGAGATGCAGCTGCTaGGGGACGAGTCGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGRCSC*GTSRAE
Trigger: TTCTGCTCGACTCGTCCCGCAGCAGCTGCATCTCCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGTTGGGAGATGCAGCTaGTGCGGGACGAGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQVGRCS*CGTSRA
Trigger: TGCTCGACTCGTCCCGCAGCAGCTGCATCTCCCAAC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTTGGGAGATGCAGCTaGTGCGGGACGAGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVGRCS*CGTSRA
Trigger: TGCTCGACTCGTCCCGCAGCAGCTGCATCTCCCAAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCTCCTGCCCAGGGCATaGGAGGTGGTTCTCACACTC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSLLPRA*EVVLTL
Trigger: GAGTGTGAGAACCACCTCGCATGCCCTGGGCAGGAG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGAGTTCACACACTCCTaGCCAGGGCATGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSEFTHS*PGHARW
Trigger: CCACCTCGCATGCCCTGGGCAGGAGTGTGTGAACTC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGC +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEAGSSSR*CNSMSS
Trigger: GCTACTCATGCTATTGCAGCAACGGCTACTACTACC...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGACACTCGTTGATGTCTaGGGAGGGGAGACAACGATC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQTLVDV*GGETTI
Trigger: GATCGTTGTCTCCCCTCCGCAGACATCAACGAGTGT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS-3UTR CCA 90 bp CTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: LASEVRGTEAAVRLHAHTGLHTF*AGSFGP
Trigger: GGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCC...GGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATATCCTCACGCTGGGGCTaGGACTGGGCACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTIDATPCSSSRWLASGISSRWG*DWALQA
Trigger: TGCCTGCAGTGCCCAGTCCCAGCCCCAGCGTGAGGA...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp GTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGCCGGGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VVGQWHSVHGAGEAWYSRVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...CCGGCTGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp TCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: SSSRWLASGIVYTERVRPVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...AGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp TGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATAGATAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: CTTTDASCGCSTWTLTIDRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...ATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp GTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGCCGGAGAGCTCTGGCCTCCTaGAGCGTCAGTGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VVGQWHSVHGAGEAWYSRRALAS*SVSGCQ
Trigger: CTGGCAGCCACTGACGCTCCAGGAGGCCAGAGCTCT...CCGGCTGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGTGCTCGTCGTCGCGGTaGTTGGCCAGTGGCATAGTG +
Preference number: 4 (lower is better)
Translates to: LPAKSGGQRQRSGFTHTPCSSSR*LASGIV
Trigger: CACTATGCCACTGGCCAACCACCGCGACGACGAGCA...CGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGGACACACGCTCCACCTaGTGCACCACCACCGACGCC +
Preference number: 4 (lower is better)
Translates to: RTHRHCDRSRDTGPGPCQDTRST*CTTTDA
Trigger: GGCGTCGGTGGTGGTGCACCAGGTGGAGCGTGTGTC...CTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR CCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTCTTTCAAAGCCGGTTaGACAAGGTCCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSFKAG*TRSIWG
Trigger: GCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCTCGGTGTTAGTGCAGTaGCCGTGGGGACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSSVLVQ*PWGPQG
Trigger: TCCCTGTGGTCCCCACGGCCACTGCACTAACACCGA...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTCGGGACCATATTCTTaGCACTCATCCACATCGTCA +
Preference number: 4 (lower is better)
Translates to: APGPGPGPRHQWEALVEASGPYS*HSSTSS
Trigger: TGACGATGTGGATGAGTGCCAAGAATATGGTCCCGA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAGCACTCTGTGTAGGTaGCCTGACGGTCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSTLCR*PDGPAE
Trigger: CTCGGCTGGACCGTCAGGCCACCTACACAGAGTGCT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCACTCATCCACATCCTaGCAGCTGGCTCCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQHSSTS*QLAPCG
Trigger: ACCGCACGGAGCCAGCTGCCAGGATGTGGATGAGTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243562.13
3UTR CAA 72 bp ACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: TIDATPCSSSRW*ASGIVYTERVR
Trigger: CCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR TCA 90 bp CTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LASEVRGTEAAVRLHAHTSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...GGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGGCCCTTTGGCCTCTaGGATCACGTGTTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGPFGL*DHVLGD
Trigger: ATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGTTGCTGCAATAGCATaGGTAGCCCGGGGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQVAAIA*VARGRV
Trigger: AACACGGCCCCGGGCTACTCATGCTATTGCAGCAAC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASWSVSGCQLRDTCLFLTAPLGA*TLFGLA
Trigger: TGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGC...CGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFAPLGA*TLFGLA
Trigger: TGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGC...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGCTGGGACTGGGCACTaGAGGCACTGGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTIDATPCSSSRWLASGIAGTGH*RHWVQA
Trigger: TGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCCAGC...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACGCAACTGGCAGAACTTaGCAGCGAAGTCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHATGRT*QRSPGD
Trigger: GTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGC...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGCAACTGGCAGAACTTaGCAGCGAAGTCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCATGRT*QRSPGD
Trigger: GTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGC...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp GGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAACCACCGACGCCTCCTaGGGGTGCTCCACGTGGACG +
Preference number: 4 (lower is better)
Translates to: GSGQASRTHRHCDRSRDTTTDAS*GCSTWT
Trigger: CGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGT...TGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGTTGCGCTGACACATaGCGGAGGAGGGACCTGATT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGCADT*RRRDLI
Trigger: AATCAGGTCCCTCCTCCGGCATGTGTCAGCGCAACC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGATTCGTCCACATCAATaGATCGGGTGCCCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQIRPHQ*IGCPGG
Trigger: GCCCCCAGGGCACCCGATGCATTGATGTGGACGAAT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCAGGATGTTGTCACATaGATCCGGGGCCGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSQDVVT*IRGRCV
Trigger: GACACAGCGGCCCCGGATGCATGTGACAACATCCTG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAGTAGTAGCCGTTGCTaGAATAGCATGAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSSSRC*NSMSSP
Trigger: CGGGCTACTCATGCTATTGCAGCAACGGCTACTACT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGGGGCGTAGCACATTaGACAGGGCCTCGAAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGGVAH*TGPRSH
Trigger: ATGACTTCGAGGCCCTGTGCAATGTGCTACGCCCCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCC +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHGLHTF*AGSFGP
Trigger: GGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCC...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp TCGTCGTCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGGTTCAGGCACCGCTaGGGGCCTGCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: SSSRWLASGIVYTERVRPGFRHR*GPAHFL
Trigger: CAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCC...AGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGACGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: LASEVRGTEAAVRLHAHTPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...GGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACGCGGTGGTTGGCCAGTaGCATAGTGTACACGGAGCG +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHAVVGQ*HSVHGA
Trigger: CGCTCCGTGTACACTATGCCACTGGCCAACCACCGC...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp ACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACTGCGGGTGCTCCACGTaGACGCTCACCATAGATGCC +
Preference number: 4 (lower is better)
Translates to: TCQRSPGDRGSGQASRTHCGCST*TLTIDA
Trigger: GGCATCTATGGTGAGCGTCCACGTGGAGCACCCGCA...GTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCATTCATCCACATCCTaGCAGCTGGCTCCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQHSSTS*QLAPCG
Trigger: ACCGCACGGAGCCAGCTGCCAGGATGTGGATGAATG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCATTCATCCACATCCTaGCAGCTGGCTCCGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSHSSTS*QLAPCG
Trigger: ACCGCACGGAGCCAGCTGCCAGGATGTGGATGAATG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCACAGGCCTGGGCTCTaGGTGCATTCATCCACATCC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSHRPGL*VHSSTS
Trigger: GGATGTGGATGAATGCACCCAGAGCCCAGGCCTGTG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTGGGTTGGAAGCCCATaGGGCAGACACACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQWVGSP*GRHTGS
Trigger: GCTTCCAGTGTGTCTGCCCCATGGGCTTCCAACCCA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCCAGCAGTGTTGGGTTaGAAGCCCATGGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSPAVLG*KPMGQT
Trigger: TGTCTGCCCCATGGGCTTCCAACCCAACACTGCTGG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCCAGCAGTGTTGGGTTaGAAGCCCATGGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQPAVLG*KPMGQT
Trigger: TGTCTGCCCCATGGGCTTCCAACCCAACACTGCTGG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTACAGATGCCGCTCTaGCAAAGGTCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVQMPL*QRSSSL
Trigger: CAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTCGGGACCATATTCTTaGCACTCATCCACATCGTCA +
Preference number: 4 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSSGPYS*HSSTSS
Trigger: TGACGATGTGGATGAGTGCCAAGAATATGGTCCCGA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGACTCTTCCGGGCTGTTaGGGCAGACACAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQTLPGC*GRHRGR
Trigger: CCTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSHSVQS*GQTLPG
Trigger: GCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQHSVQS*GQTLPG
Trigger: GCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCCAGCAGAAGTTCGTaGGGGAACACAGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSASRSS*GNTASS
Trigger: ACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQWSRKS*HSSTSL
Trigger: GAGAGACGTGGACGAATGTCAGCTCTTCCGAGACCA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATATAGATGCCACGCCGTaGTCGTCGTCGCGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RGTEAAVRLHAHTAIVTDIDATP*SSSRWL
Trigger: CAACCACCGCGACGACGAGCACGGCGTGGCATCTAT...ATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp TCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGACGCTCACCATAGATaGCACGCCGTGCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SRWLASGIVYTERVRPGTDAHHR*HAVLVV
Trigger: GACGACGAGCACGGCGTGGCATCTATGGTGAGCGTC...TGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp AACTTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACAGACGCTCACCATAGATaGCACGCCGTGCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: NLPAKSGGQRQRSGFTHTDAHHR*HAVLVV
Trigger: GACGACGAGCACGGCGTGGCATCTATGGTGAGCGTC...TGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGGTGTTGGTACAGATaGCGCTCTGGCAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRCWYR*RSGKGP
Trigger: AGGACCTTTGCCAGAGCGGCATCTGTACCAACACCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGTACAGCAGCACTCCTaGCATGTCACATTCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQVQQHS*HVTFRA
Trigger: GGCTCGGAATGTGACATGGCAGGAGTGCTGCTGTAC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCACACACGCCACTCTTaGACACCTGGTCTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQHTRHS*TPGLGR
Trigger: TCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QAGGPVHIRISGLQDARQGSSSR*CNSMSS
Trigger: GCTACTCATGCTATTGCAGCAACGGCTACTACTACC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAA +
Preference number: 4 (lower is better)
Translates to: SRTHRHCDRSRDTGPGPCLLLDV*PGQQRQ
Trigger: TTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAG...GCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCGGGTTCAGGCACCGCTaGGGGCCTGCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFGFRHR*GPAHFL
Trigger: CAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCC...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp GCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGGGGTTCAGGCACCGCTaGGGGCCTGCACACTTTTTG +
Preference number: 4 (lower is better)
Translates to: ASWSVSGCQLRDTCLFLTGFRHR*GPAHFL
Trigger: CAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCC...CGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: RGTEAAVRLHAHTAIVTDLLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...ATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCCTGGAGCGTCAGTaGCTGCCAGTTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFLLERQ*LPVEGH
Trigger: GTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTCCCGAGGAGTGCAACTaGCAGAACTTGCCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCPEECN*QNLPAK
Trigger: CTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGG...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGAAGCAGGGCCCTTTaGCCTCTGAGATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGSRAL*PLRSRV
Trigger: AACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCCAGGGCATGCGAGGTaGTTCTCACACTCATCCACA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQPGHAR*FSHSST
Trigger: TGTGGATGAGTGTGAGAACCACCTCGCATGCCCTGG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTTGTCATCGAGGCTCTaGCTCTCGTTGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQLSSRL*LSLETQ
Trigger: CTGCGTCTCCAACGAGAGCCAGAGCCTCGATGACAA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCATCGTCCTCAAAGTCTaGCATGTCGAAGCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSIVLKV*HVEAGC
Trigger: GCACCCCGCTTCGACATGCCAGACTTTGAGGACGAT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR TCA 90 bp GCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGTCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ASWSVSGCQLRDTCLFLTSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...CGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR TCA 90 bp CTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGCTCCTCAGTTTCCCGCCTaGCCAGGAGAAAGGTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLERQWLPVEGHLSLPHAPQFPA*PGERCR
Trigger: ACGGCACCTTTCTCCTGGTCAGGCGGGAAACTGAGG...AGCGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS-3UTR GCA 90 bp GGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGCTGGGACTGGGCACTaGAGGCACTGGGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GSGQASRTHRHCDRSRDTAGTGH*RHWVQA
Trigger: TGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCCAGC...TGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: RTHRHCDRSRDTGPGPCQWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...CTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCTGGAGCGTCAGTGGCTaGCAGTTGAGGGACACCTGT +
Preference number: 4 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFWSVSG*QLRDTC
Trigger: ACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCA...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGCTGCAACTGGCAGAACTTaGCAGCGAAGTCCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLERQWLPVEGHLSLPHAATGRT*QRSPGD
Trigger: GTCCCCCGGACTTCGCTGGCAAGTTCTGCCAGTTGC...AGCGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGACTCGTCATTGTCGATaGACTCCAGCCGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQTRHCR*TPAAVC
Trigger: ACACACAGCGGCTGGAGTGCATCGACAATGACGAGT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp GCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGGCAGCTTCGGACCCTaGAGAAGGCTCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: AAVRLHAHTAIVTDQGTQGSFGP*RRLGCS
Trigger: GCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCC...CTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACAGGCAGCTTCGGACCCTaGAGAAGGCTCGGATGCAGC +
Preference number: 4 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTGSFGP*RRLGCS
Trigger: GCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCC...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp GGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGTCTCTTCCTCACGCTaGGGCTGGGACTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GSGQASRTHRHCDRSRDTVSSSR*GWDWAL
Trigger: CAGTGCCCAGTCCCAGCCCCAGCGTGAGGAAGAGAC...TGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTCTTTCAAAGCCGGTTaGACAAGGTCCATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSFKAG*TRSIWG
Trigger: GCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGTGTTCTCACAACGCTaGGCTCCACAAATCTCGGGA +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSVFSQR*APQISG
Trigger: TCCCGAGATTTGTGGAGCCCAGCGTTGTGAGAACAC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTAGTAGCCGTTGCTaGAATAGCATGAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSSSSRC*NSMSSP
Trigger: CGGGCTACTCATGCTATTGCAGCAACGGCTACTACT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp CGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGAAACAGCAACGCCTGTaGCTGGAGCATTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RTHRHCDRSRDTGPGPCQKQQRL*LEHLLG
Trigger: CCCCAGCAAATGCTCCAGCCACAGGCGTTGCTGTTT...CTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS-3UTR CCA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATAGCGTTTCTTGGTCTTTaGGCCTCAGTTTCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LTIDATPCSSSRWLASGIAFLGL*ASVSRL
Trigger: CAGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGC...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS-3UTR TCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACATCAGTGGCTGCCAGTTaGGGGACACCTGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTSVAAS*GTPVSS
Trigger: GGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGA...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSGSSSR*CNSMSS
Trigger: GCTACTCATGCTATTGCAGCAACGGCTACTACTACC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp GCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGCTTCAGTAGAGCTCTaGCCTCCTGGAGCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: AAVRLHAHTAIVTDQGTQASVEL*PPGASV
Trigger: CACTGACGCTCCAGGAGGCCAGAGCTCTACTGAAGC...CTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CCA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTCGGGACCATATTCTTaGCACTCATCCACATCGTCA +
Preference number: 4 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSGPYS*HSSTSS
Trigger: TGACGATGTGGATGAGTGCCAAGAATATGGTCCCGA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CCA 90 bp TCGCGGTGGTTGGCCAGTGGCATAGTGTACACGGAGCGGGTGAGGCCTGGTACAGAAGCCAGCGTTTCTTaGTCTTTGGGCCTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: SRWLASGIVYTERVRPGTEASVS*SLGLSF
Trigger: GAAACTGAGGCCCAAAGACCAAGAAACGCTGGCTTC...TGTACCAGGCCTCACCCGCTCCGTGTACACTATGCCACTGGCCAACCACCGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS-3UTR TCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACAGGAGATTCATGGGTATaGACTCCCCTTGACACTCCC +
Preference number: 4 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTGDSWV*TPLDTP
Trigger: GGGAGTGTCAAGGGGAGTTCATACCCATGAATCTCC...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR GCA 90 bp GCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGAAACAAACCTTCCAGTaGTCTGGAAGGGCGGATAGT +
Preference number: 4 (lower is better)
Translates to: ASWSVSGCQLRDTCLFLTKQTFQ*SGRADS
Trigger: ACTATCCGCCCTTCCAGAGCACTGGAAGGTTTGTTT...CGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR CCA 90 bp TTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGAGATATTCCTACCGGTaGAGATTCATGGGTATGAAC +
Preference number: 4 (lower is better)
Translates to: LPAKSGGQRQRSGFTHTPRYSYR*RFMGMN
Trigger: GTTCATACCCATGAATCTCCACCGGTAGGAATATCT...CGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR GCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACCAGACATCCTGGCATaGAAGATATTCCTACCGGTG +
Preference number: 4 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTPDILA*KIFLPV
Trigger: CACCGGTAGGAATATCTTGCATGCCAGGATGTCTGG...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR TCA 90 bp GGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGTATGAACTCCCCTTaGCACTCCCCTATTCTAGAA +
Preference number: 4 (lower is better)
Translates to: GSGQASRTHRHCDRSRDTGMNSP*HSPILE
Trigger: TTCTAGAATAGGGGAGTGTCAAGGGGAGTTCATACC...TGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR CCA 90 bp CGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTCCATTATGGATTTCTTaGAACGCAAACAAACCTTCC +
Preference number: 4 (lower is better)
Translates to: RSPGDRGSGQASRTHRHCPLWIS*NANKPS
Trigger: GGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGG...ACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR CCA 90 bp GAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCAAGGGACAGCATTCCAGACATCCTaGCATGCAAGATATTCCTAC +
Preference number: 4 (lower is better)
Translates to: EAAVRLHAHTAIVTDQGTAFQTS*HARYSY
Trigger: GTAGGAATATCTTGCATGCCAGGATGTCTGGAATGC...TGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR CCA 90 bp GCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCCTCACGAATCTCCTGCCATTATaGATTTCTTGGAACGCAAAC +
Preference number: 4 (lower is better)
Translates to: ASWSVSGCQLRDTCLFLTNLLPL*ISWNAN
Trigger: GTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATT...CGTGAGGAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 90 bp CCAGCGGGTGCCAGGGCTCAGGCCCGGGGCCGTGCGGGCGCACAGTaGTGCGGCTGGTGCGTGGGTGCGAATCCCGGGCGGCAGATGCAG +
Preference number: 5 (lower is better)
Translates to: PAGARAQARGRAGAQ*CGWCVGANPGRQMQ
Trigger: CTGCATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCCGGGCCTGAGCCCTGGCACCCGCTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS TCA 90 bp AGCCGGTCGGCCCATGGACGCAGCGCAGGCCGCACACGACCGGGGTaGAGCGCACGCGGAGACGCTCTCCGAGCCGGCCCAGTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SRSAHGRSAGRTRPG*SARGDALRAGPVQA
Trigger: AGCCTGGACTGGGCCGGCTCGGAGAGCGTCTCCGCGTGCGCTTCACCCCGGTCGTGTGCGGCCTGCGCTGCGTCCATGGGCCGACCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS GCA 90 bp CTGGGAAGGAGCGGCGGGTGTCCCGGGACCGATAGGGCCAGCGGGTaGCCGGGCCAGGTGGCGCAGGAGCCTCAGATTCGCCATAGGGGC +
Preference number: 5 (lower is better)
Translates to: LGRSGGCPGTDRASG*PGQVAQEPQIRHRG
Trigger: GCCCCTATGGCGAATCTGAGGCTCCTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATCGGTCCCGGGACACCCGCCGCTCCTTCCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS GCA 90 bp CGGAGACGCTCTCCGAGCCGGCCCAGTCCAGGCTGCGGCCCTAGCTaGGCCAGCAGCACCAATAGCGACACCCAGAGCAGCCGCACGCCG +
Preference number: 5 (lower is better)
Translates to: RRRSPSRPSPGCGPS*ASSTNSDTQSSRTP
Trigger: CGGCGTGCGGCTGCTCTGGGTGTCGCTATTGGTGCTGCTGGCGCAGCTAGGGCCGCAGCCTGGACTGGGCCGGCTCGGAGAGCGTCTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS CCA 90 bp GCGGGTGTCCCGGGACCGATAGGGCCAGCGGGTGCCCGGGCCAGGTaGCGCAGGAGCCTCAGATTCGCCATAGGGGCCACCATCGTCCTC +
Preference number: 5 (lower is better)
Translates to: AGVPGPIGPAGARAR*RRSLRFAIGATIVL
Trigger: GAGGACGATGGTGGCCCCTATGGCGAATCTGAGGCTCCTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATCGGTCCCGGGACACCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAAGGAGCCTGCCGTGTaGTCACAGCGGCCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSKEPAV*SQRPGP
Trigger: TGGGCCCGGCCGCTGTGACAACACGGCAGGCTCCTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACACTCATCCACATCTaGGCAGGGGGCCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTLIHI*AGGPGP
Trigger: GGGCCCGGGGCCCCCTGCCAAGATGTGGATGAGTGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCACACTCATCCACATCTaGGCAGGGGGCCCCGGGCCC +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSTLIHI*AGGPGP
Trigger: GGGCCCGGGGCCCCCTGCCAAGATGTGGATGAGTGT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGCACGCAGCGGCCGTaGGTGCAGCCGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRTQRP*VQPSRI
Trigger: GATCCTGGACGGCTGCACCAACGGCCGCTGCGTGCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAAGGAGCCTGCCGTGTaGTCACAGCGGCCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQKEPAV*SQRPGP
Trigger: TGGGCCCGGCCGCTGTGACAACACGGCAGGCTCCTT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGAGGCTCTGGCTCTCGTaGGAGACGCAGCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRLWLS*ETQRRC
Trigger: GCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCCT...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTTGAGGCAACGCGCGTaGACGCACAGCGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPLRQRA*THSGEA
Trigger: TGCCTCCCCGCTGTGCGTCAACGCGCGTTGCCTCAA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTTGAGGCAACGCGCGTaGACGCACAGCGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLRQRA*THSGEA
Trigger: TGCCTCCCCGCTGTGCGTCAACGCGCGTTGCCTCAA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCTCCACGCTGGTGGCGTaGCGGGGCGCGCAGGTCGGG +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSSTLVA*RGAQVG
Trigger: CCCGACCTGCGCGCCCCGCAACGCCACCAGCGTGGA...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS GCA 90 bp GTGAAGCGCACGCGGAGACGCTCTCCGAGCCGGCCCAGTCCAGGCTaGGGCCCTAGCTGCGCCAGCAGCACCAATAGCGACACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VKRTRRRSPSRPSPG*GPSCASSTNSDTQS
Trigger: GCTCTGGGTGTCGCTATTGGTGCTGCTGGCGCAGCTAGGGCCGCAGCCTGGACTGGGCCGGCTCGGAGAGCGTCTCCGCGTGCGCTTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS CCA 90 bp GTCGCAAGCGCAGGTGTAGCCGCTGGGCCGGGAAATGCAGCGTCCTaGGCCGCAGACCTGGGGGTTGCGCTGACACATGCCGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VASAGVAAGPGNAAS*AADLGVALTHAGGG
Trigger: CCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCGCTTGCGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 90 bp CGGACCCTGCAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTGGCCGGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RTLQKARMQRLLLDV*PGQQRQTATLAGRL
Trigger: CAGCCGCCCGGCCAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTGCAGGGTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308370.11
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCACAGGACCGGGGCCTaGCCAGCGGGGGCACGCTGT +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQHRTGA*PAGARC
Trigger: ACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CAA 90 bp CGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCCAGCGGGGGCACCACAGGACCGGGGCCTaGCCAGCGGGGGCACGCTGT +
Preference number: 5 (lower is better)
Translates to: RHCDRSRDTGPGPCQRGHHRTGA*PAGARC
Trigger: ACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGTG...GTGCCCCCGCTGGCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CAA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTAC +
Preference number: 5 (lower is better)
Translates to: APGPGPGPRHQWEALVEASSSRW*ASGIVY
Trigger: GTACACTATGCCACTGGCCAACCACCGCGACGACGA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCCAGCAGTGTTGGGTaGGAAGCCCATGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPASSVG*EAHGAD
Trigger: GTCTGCCCCATGGGCTTCCAACCCAACACTGCTGGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCCAGCAGTGTTGGGTaGGAAGCCCATGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSASSVG*EAHGAD
Trigger: GTCTGCCCCATGGGCTTCCAACCCAACACTGCTGGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCTCGGAGCCAGCAGTGTaGGGTTGGAAGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPSEPAV*GWKPMG
Trigger: CCCCATGGGCTTCCAACCCAACACTGCTGGCTCCGA...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGTTCCGAGCCAGGATGTaGTCACATGCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: APGPGPGPRHQWEALVEAFRARM*SHASGA
Trigger: GGCCCCGGATGCATGTGACAACATCCTGGCTCGGAA...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS TCA 90 bp CCATGCGGGTCATGTCCAGGCGGTAGCCGTCGAAGCAACGGCAGGTaGAGCCTTCGGGGACGCGCACGCAGCGGCCGTTGGTGCAGCCGT +
Preference number: 5 (lower is better)
Translates to: PCGSCPGGSRRSNGR*SLRGRARSGRWCSR
Trigger: ACGGCTGCACCAACGGCCGCTGCGTGCGCGTCCCCGAAGGCTTCACCTGCCGTTGCTTCGACGGCTACCGCCTGGACATGACCCGCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
ENST00000599225.1
CDS GCA 90 bp CAGAAAGCCGTCGGGGCACACACACGTGTACCCGCCGCGCGTGTTTaGACACTCGCCGTGCTGGCAGCGCCCGCCAGTCGCGCACTCATC +
Preference number: 5 (lower is better)
Translates to: QKAVGAHTRVPAARV*TLAVLAAPASRALI
Trigger: GATGAGTGCGCGACTGGCGGGCGCTGCCAGCACGGCGAGTGTGCAAACACGCGCGGCGGGTACACGTGTGTGTGCCCCGACGGCTTTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS-3UTR CAA 90 bp CCGGGGGCCGGGCGCCCGAGGAGTGCAACTGGCAGAACTTGCCAGCGAAGTCCGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: PGAGRPRSATGRTCQRSPGPAHF*GWQLRT
Trigger: GGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCC...CGGACTTCGCTGGCAAGTTCTGCCAGTTGCACTCCTCGGGCGCCCGGCCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCTCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTAC +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSSSSRW*ASGIVY
Trigger: GTACACTATGCCACTGGCCAACCACCGCGACGACGA...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCGGAAGCAGGGCCCTTaGGCCTCTGAGATCACGTGT +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSRKQGP*ASEITC
Trigger: ACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTCGGAGCCAGCAGTGTaGGGTTGGAAGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQSEPAV*GWKPMG
Trigger: CCCCATGGGCTTCCAACCCAACACTGCTGGCTCCGA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCAAGGAGCCGTCGGTGTaGGTACAGATGCCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPKEPSV*VQMPLW
Trigger: CCAGAGCGGCATCTGTACCAACACCGACGGCTCCTT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAAGGAGCCGTCGGTGTaGGTACAGATGCCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSKEPSV*VQMPLW
Trigger: CCAGAGCGGCATCTGTACCAACACCGACGGCTCCTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GCCCCTGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGACACACACGCCACTCTaGCACACCTGGTCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: APGPGPGPRHQWEALVEATHTPL*HTWSRK
Trigger: CTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGT...CGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCCGCACGCAGCGGCCGTaGGTGCAGCCGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSRTQRP*VQPSRI
Trigger: GATCCTGGACGGCTGCACCAACGGCCGCTGCGTGCG...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCGCACGCAGCGGCCGTaGGTGCAGCCGTCCAGGATC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRTQRP*VQPSRI
Trigger: GATCCTGGACGGCTGCACCAACGGCCGCTGCGTGCG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAAGGAGCCATCCGTGTaGAGGCAACGCGCGTTGACG +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSKEPSV*RQRALT
Trigger: CGTCAACGCGCGTTGCCTCAACACGGATGGCTCCTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS TCA 90 bp CGCGGCGACATTCGTCCACATCAATGCATCGGGTGCCCTGGGGGCTaGGCCGGAAGCCAGAGTCGCAAGCGCAGGTGTAGCCGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: RGDIRPHQCIGCPGG*AGSQSRKRRCSRWA
Trigger: GGCCCAGCGGCTACACCTGCGCTTGCGACTCTGGCTTCCGGCTCAGCCCCCAGGGCACCCGATGCATTGATGTGGACGAATGTCGCCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp GGGCACACACACGTGTACCCGCCGCGCGTGTTTGCACACTCGCCGTaGTGGCAGCGCCCGCCAGTCGCGCACTCATCCACATCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: GHTHVYPPRVFAHSP*WQRPPVAHSSTSSQ
Trigger: CTGCGAAGATGTGGATGAGTGCGCGACTGGCGGGCGCTGCCAGCACGGCGAGTGTGCAAACACGCGCGGCGGGTACACGTGTGTGTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp AGGAGGGACCTGATTCAGGAATCTCAGGACCAGTCCAGGCAGGGATaGTGGGCAAGGGAAGCTCAGGGCCGGGCCGGGGATCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: RRDLIQESQDQSRQG*WAREAQGRAGDRAG
Trigger: CCCGGCCCGATCCCCGGCCCGGCCCTGAGCTTCCCTTGCCCAGCATCCCTGCCTGGACTGGTCCTGAGATTCCTGAATCAGGTCCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp GGAAGCCAGAGTCGCAAGCGCAGGTGTAGCCGCTGGGCCGGGAAATaGAGCGTCCTGGGCCGCAGACCTGGGGGTTGCGCTGACACATGC +
Preference number: 5 (lower is better)
Translates to: GSQSRKRRCSRWAGK*SVLGRRPGGCADTC
Trigger: GCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCGCTTGCGACTCTGGCTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp ATAGGGGCCACCATCGTCCTCAAAGTCTGGCATGTCGAAGCGGGGTaGCCCATAAGGAGCCTCCCGGCGGGCGAAGGGCCCAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: IGATIVLKVWHVEAG*PIRSLPAGEGPRWR
Trigger: CCGCCACCTGGGCCCTTCGCCCGCCGGGAGGCTCCTTATGGGGCACCCCGCTTCGACATGCCAGACTTTGAGGACGATGGTGGCCCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 90 bp GCAGCGAACAGCCGCCGTCGCGGAGCACGCGGAAGCAGGGCCCTTTaGCCTCTGAGATCACGTGTTGGGAGATGCAGCTGCTGCGGGACG +
Preference number: 5 (lower is better)
Translates to: AANSRRRGARGSRAL*PLRSRVGRCSCCGT
Trigger: CGTCCCGCAGCAGCTGCATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCGCGTGCTCCGCGACGGCGGCTGTTCGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS CCA 90 bp CAGGGAACCAGCATAGCTTCCACCTTCAGGAGGCTCCTCGGGCTCTaGGAAGGAGCGGCGGGTGTCCCGGGACCGATAGGGCCAGCGGGT +
Preference number: 5 (lower is better)
Translates to: QGTSIASTFRRLLGL*EGAAGVPGPIGPAG
Trigger: ACCCGCTGGCCCTATCGGTCCCGGGACACCCGCCGCTCCTTCCCAGAGCCCGAGGAGCCTCCTGAAGGTGGAAGCTATGCTGGTTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
ENST00000601032.5
CDS CCA 90 bp CACGCGGTGGCACTCGTCCACATCTGTAGGCACAGACCAGGCGGCTaGGACTGGGGCAGACAGCCCCGGGAGAAGCGACGCAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: HAVALVHICRHRPGG*DWGRQPREKRRKEA
Trigger: TGCCTCCTTGCGTCGCTTCTCCCGGGGCTGTCTGCCCCAGTCCCAGCCGCCTGGTCTGTGCCTACAGATGTGGACGAGTGCCACCGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546155.5
ENST00000598256.1
CDS CCA 90 bp ACCCGATGCCTGATGGACACCCACCCTGGCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCACAGGCTGGTGTGCAGCGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: TRCLMDTHPGIRPLA*ADSQGHRLVCSGRS
Trigger: GCTCCTACCGCTGCACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAGGCATCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGTCAGTGGCTGCCAGTaGAGGGACACCTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPVSGCQ*RDTCLF
Trigger: GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGAC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CAA 90 bp CTCACCATAGATGCCACGCCGTGCTCGTCGTCGCGGTGGTTGGCCAGTGGCATACACAGGACCGGGGCCTaGCCAGCGGGGGCACGCTGT +
Preference number: 5 (lower is better)
Translates to: LTIDATPCSSSRWLASGIHRTGA*PAGARC
Trigger: ACAGCGTGCCCCCGCTGGCAAGGCCCCGGTCCTGTG...TATGCCACTGGCCAACCACCGCGACGACGAGCACGGCGTGGCATCTATGGTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCGGAAGCAGGGCCCTTaGGCCTCTGAGATCACGTGT +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQRKQGP*ASEITC
Trigger: ACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCAACTCTTCCGGGCTGTaGGGGCAGACACAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPNSSGL*GQTQRK
Trigger: CTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGTT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCAACTCTTCCGGGCTGTaGGGGCAGACACAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSNSSGL*GQTQRK
Trigger: CTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGTT...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGTTCCGAGCCAGGATGTaGTCACATGCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQFRARM*SHASGA
Trigger: GGCCCCGGATGCATGTGACAACATCCTGGCTCGGAA...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCACACACACGCCACTCTaGCACACCTGGTCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPTHTPL*HTWSRK
Trigger: CTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGT...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAGGCTCTGGCTCTCGTaGGAGACGCAGCGGCGCTGC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQRLWLS*ETQRRC
Trigger: GCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCCT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCCAGCACACTCCCAGATaGTCATCGAGGCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPQHTPR*SSRLWL
Trigger: GAGCCAGAGCCTCGATGACAATCTGGGAGTGTGCTG...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp GGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGGGCCCGCCTCATCACACTCGTaGATGTCTGCGGAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: GGPVHIRISGLQDARQGPASSHS*MSAEGR
Trigger: TCTCCCCTCCGCAGACATCAACGAGTGTGATGAGGC...GGGCCCCTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS TCA 90 bp GCCTCCGCGCAGCTCCCGAAAGCAGTAACCGAAGCCCGAGGCATCTaGGTAGCCGTCCTCCCGCGGCGCGCTCTGTGCCAACACCGTGTA +
Preference number: 5 (lower is better)
Translates to: ASAQLPKAVTEARGI*VAVLPRRALCQHRV
Trigger: TACACGGTGTTGGCACAGAGCGCGCCGCGGGAGGACGGCTACTCAGATGCCTCGGGCTTCGGTTACTGCTTTCGGGAGCTGCGCGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp GGGACTGGGCACTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTCG +
Preference number: 5 (lower is better)
Translates to: GTGHCRHWVQAPLGA*TLFGLAASDPAEGS
Trigger: CGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS GCA 90 bp CGTCGGTGTTGGTACAGATGCCGCTCTGGCAAAGGTCCTCCTCGCTaGACTCGTCAACGTCTGCGGGACAGGGCGTCCGAAGGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RRCWYRCRSGKGPPR*TRQRLRDRASEGPA
Trigger: GGCCGGGCCTTCGGACGCCCTGTCCCGCAGACGTTGACGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCAACACCGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595118.5
ENST00000602251.5
ENST00000622565.4
CDS GCA 90 bp GCTGACATTCGTCCACGTCTGTCTCGGTGCCCGGGCACTGCTGGATaGGGCAGCCGCTGCCCCAGCCCTCACCCACAGTACAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: ADIRPRLSRCPGTAG*GSRCPSPHPQYSST
Trigger: AGTGCTGCTGTACTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGACGTGGACGAATGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594116.1
CDS CCA 90 bp CACACACACGTGTACCCGCCGCGCGTGTTTGCACACTCGCCGTGCTaGCAGCGCCCGCCAGTCGCGCACTCATCCACATCTTCGCAGGAC +
Preference number: 5 (lower is better)
Translates to: HTHVYPPRVFAHSPC*QRPPVAHSSTSSQD
Trigger: GTCCTGCGAAGATGTGGATGAGTGCGCGACTGGCGGGCGCTGCCAGCACGGCGAGTGTGCAAACACGCGCGGCGGGTACACGTGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 90 bp GGGCACAATGACTGGTACTCAGCTGTCTCGGTGCCCGGGCACTGCTaGATGCGGCAGCCGCTGCCCCAGCCCTCACCCACAGTACAGCAG +
Preference number: 5 (lower is better)
Translates to: GHNDWYSAVSVPGHC*MRQPLPQPSPTVQQ
Trigger: CTGCTGTACTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGTACCAGTCATTGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 90 bp GGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTGGGCTaGCAGCTTCGGACCCTGCAGAAGGCTCGGATGCAGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GTGFRHRWGPAHFLG*QLRTLQKARMQRLL
Trigger: GAGGAGCCGCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS CCA 90 bp CTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCCTGCAGAAGGCTCGGATGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LQALGSGTAGGLHTF*AGSFGPCRRLGCSG
Trigger: GCCGCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS CCA 90 bp ATCCGATGCCTGATGGACACCCACCCTGGCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCACAGGCTGGTGTGCAGCGGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: IRCLMDTHPGIRPLA*ADSQGHRLVCSGRS
Trigger: GCTCCTACCGCTGCACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAGGCATCGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594448.5
CDS-3UTR CAA 90 bp GCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCTCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTAC +
Preference number: 5 (lower is better)
Translates to: ASEVRGTEAAVRLHAHTASSSRW*ASGIVY
Trigger: GTACACTATGCCACTGGCCAACCACCGCGACGACGA...GGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCTCTTTCAAAGCCGGTaGGACAAGGTCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLFQSR*DKVHLG
Trigger: CCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCGCCTCATCACACTCGTaGATGTCAACGCAGGCCATG +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSASSHS*MSTQAM
Trigger: CATGGCCTGCGTTGACATCAACGAGTGTGATGAGGC...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCTTGAGGCAACGCGCGTaGACGCACAGCGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSLRQRA*THSGEA
Trigger: TGCCTCCCCGCTGTGCGTCAACGCGCGTTGCCTCAA...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTTGAGGCAACGCGCGTaGACGCACAGCGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQLRQRA*THSGEA
Trigger: TGCCTCCCCGCTGTGCGTCAACGCGCGTTGCCTCAA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS GCA 90 bp ACCGCTGGGGGCCTGCACACTTTTTGGGCTGGCAGCTTCGGACCCTaGAGAAGGCTTCGGAGACAGCCAGGGACTCGGATGCAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: TAGGLHTFWAGSFGP*RRLRRQPGTRMQRL
Trigger: GAGCCGCTGCATCCGAGTCCCTGGCTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS GCA 90 bp GGGACTGGGCACTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTaGACACTTTTTGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GTGHCRHWVQAPLGA*TLFGLAASDPAEGF
Trigger: GAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAGTGCCCAGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS GCA 90 bp CGCTGGGCCGGGAAATGCAGCGTCCTGGGCCGCAGACCTGGGGGTTaGGCTGACACATGCCGGAGGAGGGACCTGATTCAGGAATCTCAG +
Preference number: 5 (lower is better)
Translates to: RWAGKCSVLGRRPGG*ADTCRRRDLIQESQ
Trigger: CTGAGATTCCTGAATCAGGTCCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp CAGTGCATCTGCCACGGTGCAGGTGGTGGCCAGAAGGACAGGTCCTaGACTGGAAGGAGCCGGGCGAGTTCACACACTCCTGCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: QCICHGAGGGQKDRS*TGRSRASSHTPAQG
Trigger: GCCCTGGGCAGGAGTGTGTGAACTCGCCCGGCTCCTTCCAGTGCAGGACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAGATGCACTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS GCA 90 bp CTAGCAAACCTGATTCAGGAATCTCAGGACCAGTCCAGGCAGGGATaGTGGGCAAGGGAAGCTCAGGGCCGGGCCGGGGATCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LANLIQESQDQSRQG*WAREAQGRAGDRAG
Trigger: CCCGGCCCGATCCCCGGCCCGGCCCTGAGCTTCCCTTGCCCAGCATCCCTGCCTGGACTGGTCCTGAGATTCCTGAATCAGGTTTGCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595529.1
CDS CCA 90 bp GGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTGGGCTaGCAGCTTCGGACCCTGCAGAAGGCTTCGGAGACAGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: GTGFRHRWGPAHFLG*QLRTLQKASETARD
Trigger: GTCCCTGGCTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 90 bp CATCTGCCACGGTGCAGGTGGTGGCCAGAAGGACAGGTCCTGCACTaGAAGGAGCCGGGCGAGTTCACACACTCCTGCCCAGGGCATGCG +
Preference number: 5 (lower is better)
Translates to: HLPRCRWWPEGQVLH*KEPGEFTHSCPGHA
Trigger: CGCATGCCCTGGGCAGGAGTGTGTGAACTCGCCCGGCTCCTTCCAGTGCAGGACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQGPAHF*GWQLRT
Trigger: GGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCC...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS-3UTR CAA 90 bp GCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCGTCAGTGGCTGCCAGTaGAGGGACACCTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: ASEVRGTEAAVRLHAHTAVSGCQ*RDTCLF
Trigger: GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGAC...GGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGCTCTTTCAAAGCCGGTaGGACAAGGTCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQLFQSR*DKVHLG
Trigger: CCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAG...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000204005.13
ENST00000396819.8
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCCAGCAGTGTTGGGTaGGAAGCCCATGGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSASSVG*EAHGAD
Trigger: GTCTGCCCCATGGGCTTCCAACCCAACACTGCTGGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTCGGAGCCAGCAGTGTaGGGTTGGAAGCCCATGGGG +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQSEPAV*GWKPMG
Trigger: CCCCATGGGCTTCCAACCCAACACTGCTGGCTCCGA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGGGCCAGGCCCGGGACCACGACATCAGTGGGAGGCGCTGGTGGAGGCGGGAGCCTCGGGACCATATTCTaGGCACTCATCCACATCGTC +
Preference number: 5 (lower is better)
Translates to: WARPGTTTSVGGAGGGGSLGTIF*ALIHIV
Trigger: GACGATGTGGATGAGTGCCAAGAATATGGTCCCGAG...GCTCCCGCCTCCACCAGCGCCTCCCACTGATGTCGTGGTCCCGGGCCTGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGGCGGGCGGCCCCGTGCACATACGCATAAGCGGGCTGCAGGATGCGCGGCAGGCCTCATCACACTCGTaGATGTCAACGCAGGCCATG +
Preference number: 5 (lower is better)
Translates to: QAGGPVHIRISGLQDARQASSHS*MSTQAM
Trigger: CATGGCCTGCGTTGACATCAACGAGTGTGATGAGGC...CTGCCGCGCATCCTGCAGCCCGCTTATGCGTATGTGCACGGGGCCGCCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS GCA 90 bp ACAATGACTGGTACTCAGCTGTCTCGGTGCCCGGGCACTGCTGGATaGGGCAGCCGCTGCCCCAGCCCTCACCCACAGTACAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: TMTGTQLSRCPGTAG*GSRCPSPHPQYSST
Trigger: AGTGCTGCTGTACTGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGTACCAGTCATTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS GCA 90 bp CGGTCCAGCCGAGGGTGGCTGCACACGAGGTCAGCCCCCACTTCCTaGCAGCACACTCCCAGATTGTCATCGAGGCTCTGGCTCTCGTTG +
Preference number: 5 (lower is better)
Translates to: RSSRGWLHTRSAPTS*QHTPRLSSRLWLSL
Trigger: CAACGAGAGCCAGAGCCTCGATGACAATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS GCA 90 bp AGCAGCACTCTGTGTAGGTGGCCTGACGGTCCAGCCGAGGGTGGCTaGACACGAGGTCAGCCCCCACTTCCTGCCAGCACACTCCCAGAT +
Preference number: 5 (lower is better)
Translates to: SSTLCRWPDGPAEGG*TRGQPPLPASTLPD
Trigger: ATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCGTCAGGCCACCTACACAGAGTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CCA 90 bp CTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCCTGCAGAAGGCTTCGGAGACAGCCA +
Preference number: 5 (lower is better)
Translates to: LQALGSGTAGGLHTF*AGSFGPCRRLRRQP
Trigger: TGGCTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 90 bp CGGACCCTGCAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCCTTCCACGATGTGT +
Preference number: 5 (lower is better)
Translates to: RTLQKARMQRLLLDV*PGQQRQTATPSTMC
Trigger: ACACATCGTGGAAGGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTGCAGGGTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGAAGGAGCCGTCGGTGTaGGTACAGATGCCGCTCTGG +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQKEPSV*VQMPLW
Trigger: CCAGAGCGGCATCTGTACCAACACCGACGGCTCCTT...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGTTCCGAGCCAGGATGTaGTCACATGCATCCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQFRARM*SHASGA
Trigger: GGCCCCGGATGCATGTGACAACATCCTGGCTCGGAA...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAAGGAGCCATCCGTGTaGAGGCAACGCGCGTTGACG +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSKEPSV*RQRALT
Trigger: CGTCAACGCGCGTTGCCTCAACACGGATGGCTCCTT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
ENST00000598166.2
CDS GCA 90 bp CGGCAGCCGCTGCCCCAGCCCTCACCCACAGTACAGCAGCACTCCTaGCATGTCACATTCCGAGCCAGGATGTTGTCACATGCATCCGGG +
Preference number: 5 (lower is better)
Translates to: RQPLPQPSPTVQQHS*HVTFRARMLSHASG
Trigger: CCCGGATGCATGTGACAACATCCTGGCTCGGAATGTGACATGGCAGGAGTGCTGCTGTACTGTGGGTGAGGGCTGGGGCAGCGGCTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000601032.5
CDS GCA 90 bp GCACAGCGGGGAGGCAGCCTCGGCCTCATCACACTCGTTGATGTCTaGGGAGGGGAGACAACGATCGCTGCTGAAGGCAACGCAGGCCAT +
Preference number: 5 (lower is better)
Translates to: AQRGGSLGLITLVDV*GGETTIAAEGNAGH
Trigger: ATGGCCTGCGTTGCCTTCAGCAGCGATCGTTGTCTCCCCTCCGCAGACATCAACGAGTGTGATGAGGCCGAGGCTGCCTCCCCGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS CCA 90 bp CGGAGACAGCCAGGGACTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTTTTACGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RRQPGTRMQRLLLDV*PGQQRQTATLLRLP
Trigger: TGGGAGACGTAAAAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGTCCCTGGCTGTCTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 90 bp CGGACCCTGCAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTTTTACGTCTCCCA +
Preference number: 5 (lower is better)
Translates to: RTLQKARMQRLLLDV*PGQQRQTATLLRLP
Trigger: TGGGAGACGTAAAAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTGCAGGGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS-3UTR CAA 90 bp CCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGCCATTGTGACAGATCGTCGTCGCGGTGGTaGGCCAGTGGCATAGTGTAC +
Preference number: 5 (lower is better)
Translates to: PGDRGSGQASRTHRHCDRSSSRW*ASGIVY
Trigger: GTACACTATGCCACTGGCCAACCACCGCGACGACGA...TCTGTCACAATGGCGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594537.2
ENST00000599016.5
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCACACACACGCCACTCTaGCACACCTGGTCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSTHTPL*HTWSRK
Trigger: CTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGT...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCAGCACACTCCCAGATaGTCATCGAGGCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQQHTPR*SSRLWL
Trigger: GAGCCAGAGCCTCGATGACAATCTGGGAGTGTGCTG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS GCA 90 bp GTCAGGCCATTTCTGGACCTTCTACCATCTCCACATCTCACCCGATaGCTGATGGACACCCACCCTGGCATCCGCCCCCTGGCGTGGGCT +
Preference number: 5 (lower is better)
Translates to: VRPFLDLLPSPHLTR*LMDTHPGIRPLAWA
Trigger: AGCCCACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAGGCATCGGGTGAGATGTGGAGATGGTAGAAGGTCCAGAAATGGCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS CCA 90 bp GCTCTCGTTGGAGACGCAGCGGCGCTGCGAGCCATCCAGCACCAGTaGGGGCTCGCAGGTACAGTGATAAGAGCCCACAGTGTTGACACA +
Preference number: 5 (lower is better)
Translates to: ALVGDAAALRAIQHQ*GLAGTVIRAHSVDT
Trigger: TGTGTCAACACTGTGGGCTCTTATCACTGTACCTGCGAGCCCCCACTGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTCCAACGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS-3UTR CAA 90 bp TCACGCACACACCGCCATTGTGACAGATCAAGGGACACAGGACCGGGGCCTTGCGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACC +
Preference number: 5 (lower is better)
Translates to: SRTHRHCDRSRDTGPGPCGPAHF*GWQLRT
Trigger: GGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCC...GCAAGGCCCCGGTCCTGTGTCCCTTGATCTGTCACAATGGCGGTGTGTGCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS-3UTR CAA 90 bp AGCAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCGCCTCATCACACTCGTaGATGTCAACGCAGGCCATG +
Preference number: 5 (lower is better)
Translates to: SSAGRRSFQASVGPFSRSASSHS*MSTQAM
Trigger: CATGGCCTGCGTTGACATCAACGAGTGTGATGAGGC...GGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS TCA 90 bp GTCGGTAGCCAGGGGCACAAGTACAGGCAAAGGAGCCGTCAGTGTTaGGGCACTCGCCGTGAGGGAAGCAGAAATCGCCCTCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: VGSQGHKYRQRSRQC*GTRREGSRNRPPGT
Trigger: AGTGCCTGGAGGGCGATTTCTGCTTCCCTCACGGCGAGTGCCTCAACACTGACGGCTCCTTTGCCTGTACTTGTGCCCCTGGCTACCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000600499.5
ENST00000601032.5
ENST00000610893.4
ENST00000612121.4
CDS TCA 90 bp GGCCATTTCTGGACCTTCTACCATCTCCACATCTCACCCGATGCCTaGTGGACACCCACCCTGGCATCCGCCCCCTGGCGTGGGCTGATA +
Preference number: 5 (lower is better)
Translates to: GHFWTFYHLHISPDA*WTPTLASAPWRGLI
Trigger: TATCAGCCCACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAGGCATCGGGTGAGATGTGGAGATGGTAGAAGGTCCAGAAATGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS GCA 90 bp CCGGAGGACAGATGCACTCGAAGGAGCCGTCGGTGTTGGTACAGATaGCGCTCTGGCAAAGGTCCTCCTCGCTGCACTCGTCAACGTCGA +
Preference number: 5 (lower is better)
Translates to: PEDRCTRRSRRCWYR*RSGKGPPRCTRQRR
Trigger: TCGACGTTGACGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCAACACCGACGGCTCCTTCGAGTGCATCTGTCCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
CDS GCA 90 bp GCAGCACTCCTGCCATGTCACATTCCGAGCCAGGATGTTGTCACATaGATCCGGGGCCGCTGTGTCAAAGTAGCACTCCCGGCGCCCACT +
Preference number: 5 (lower is better)
Translates to: AALLPCHIPSQDVVT*IRGRCVKVALPAPT
Trigger: AGTGGGCGCCGGGAGTGCTACTTTGACACAGCGGCCCCGGATGCATGTGACAACATCCTGGCTCGGAATGTGACATGGCAGGAGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000601032.5
CDS GCA 90 bp GGACAGGTCCTGCACTGGAAGGAGCCGGGCGAGTTCACACACTCCTaGCCAGGGCATGCGAGGTGGTTCTCACACTCATCCACATTCGGA +
Preference number: 5 (lower is better)
Translates to: GQVLHWKEPGEFTHS*PGHARWFSHSSTFG
Trigger: TCCGAATGTGGATGAGTGTGAGAACCACCTCGCATGCCCTGGGCAGGAGTGTGTGAACTCGCCCGGCTCCTTCCAGTGCAGGACCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546155.5
CDS CCA 90 bp GAACTGCATTCGTCCACATCAGTGCATCTGCCACGGTGCAGGTGGTaGCCAGAAGGACAGGTCCTGCACTGGAAGGAGCCGGGCGAGTTC +
Preference number: 5 (lower is better)
Translates to: ELHSSTSVHLPRCRW*PEGQVLHWKEPGEF
Trigger: GAACTCGCCCGGCTCCTTCCAGTGCAGGACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAGATGCACTGATGTGGACGAATGCAGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS CCA 90 bp GGCCTCGCTCGCGACATTCGTCCACGTCTGAGGAGAGAGGTCGGGTaGTCGGATGTGGGAAGCAGGGAGGCAAGATGGGGGATACAAAGA +
Preference number: 5 (lower is better)
Translates to: GLARDIRPRLRREVG*SDVGSREARWGIQR
Trigger: TCTTTGTATCCCCCATCTTGCCTCCCTGCTTCCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACGAATGTCGCGAGCGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000318809.11
ENST00000594448.5
ENST00000595665.1
ENST00000596351.5
ENST00000597816.5
ENST00000601464.5
ENST00000617753.4
ENST00000622107.4
CDS-3UTR CAA 90 bp CAGTGCAGGGCGTCGCAGCTTCCAGGCGTCCGTAGGTCCCTTCTCCAGGTCCAGCTCGGGACCATATTCTaGGCACTCATCCACATCGTC +
Preference number: 5 (lower is better)
Translates to: QCRASQLPGVRRSLLQVQLGTIF*ALIHIV
Trigger: GACGATGTGGATGAGTGCCAAGAATATGGTCCCGAG...CTGGACCTGGAGAAGGGACCTACGGACGCCTGGAAGCTGCGACGCCCTGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000396819.8
CDS-3UTR CAA 90 bp TGCACCACCACCGACGCCTCCTGCGGGTGCTCCACGTGGACGCTCACCATAGATAGCGTTTCTTGGTCTTaGGGCCTCAGTTTCCCGCCT +
Preference number: 5 (lower is better)
Translates to: CTTTDASCGCSTWTLTIDSVSWS*GLSFPP
Trigger: AGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGCT...ATCTATGGTGAGCGTCCACGTGGAGCACCCGCAGGAGGCGTCGGTGGTGGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS CCA 90 bp GGAACGTGCCAGCAGAAGTTCGTGGGGGAACACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGCTGTTGGGGCAGACACAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GTCQQKFVGEHSVQS*GQTLPGCWGRHRGR
Trigger: CCTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGGCACGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000596351.5
ENST00000597071.5
ENST00000601032.5
ENST00000612121.4
ENST00000618486.4
CDS CCA 90 bp CGTCCACGTCAGCAGAAGTTCGTGGGGGAACACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGCTGTTGGGGCAGACACAGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: RPRQQKFVGEHSVQS*GQTLPGCWGRHRGR
Trigger: CCTTCCTCTGTGTCTGCCCCAACAGCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGACGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000318809.11
ENST00000593463.5
ENST00000595665.1
ENST00000597816.5
ENST00000599724.5
ENST00000622107.4
ENST00000622457.1
ENST00000622565.4
CDS TCA 90 bp CTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTGCTGCAATAGCATaGGTAGCCCGGGGCCGTGTTCACACACACGCCACTCTTGCACAC +
Preference number: 5 (lower is better)
Translates to: LQPLCVVVVAVAAIA*VARGRVHTHATLAH
Trigger: GTGTGCAAGAGTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000598178.1
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS GCA 90 bp TGTCGATGCACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTGCTaGAATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGCCAC +
Preference number: 5 (lower is better)
Translates to: CRCTPAAVCGSSSRC*NSMSSPGPCSHTRH
Trigger: GTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGTGCATCGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS GCA 90 bp TACCGATGCACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTGCTaGAATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGCCAC +
Preference number: 5 (lower is better)
Translates to: YRCTPAAVCGSSSRC*NSMSSPGPCSHTRH
Trigger: GTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGTGCATCGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598178.1
CDS GCA 90 bp GGCGTGGGCACCGCAGAAGGACCGGTTCCGGCATTCGTCCACATCTaGAACCACCAGACAGTCAGGCCATTTCTGGACCTTCTACCATCT +
Preference number: 5 (lower is better)
Translates to: GVGTAEGPVPAFVHI*NHQTVRPFLDLLPS
Trigger: AGATGGTAGAAGGTCCAGAAATGGCCTGACTGTCTGGTGGTTGCAGATGTGGACGAATGCCGGAACCGGTCCTTCTGCGGTGCCCACGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS CCA 90 bp GCAGGACCCATTAACTCTTTCAAAGCCGGTTGGACAAGGTCCATCTaGGGCGCTCACTCTTTCGGAGTTCCCCAGGCGCTCGGAGCACAG +
Preference number: 5 (lower is better)
Translates to: AGPINSFKAGWTRSI*GAHSFGVPQALGAQ
Trigger: CTGTGCTCCGAGCGCCTGGGGAACTCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAGTTAATGGGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 90 bp AATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGCCACTCTTaGACACCTGGTCTCGGAAGAGCTGACATTCGTCCACGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: NSMSSPGPCSHTRHS*TPGLGRADIRPRLS
Trigger: GGAGAGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000598178.1
ENST00000601032.5
CDS GCA 90 bp CATTGTCGATGCACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGC +
Preference number: 5 (lower is better)
Translates to: HCRCTPAAVCGSSSR*CNSMSSPGPCSHTR
Trigger: GCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGTGCATCGACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS GCA 90 bp AATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGCCACTCTTaGACACCTGGTCTCGGAAGAGCTGACATTCGTCCACGTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NSMSSPGPCSHTRHS*TPGLGRADIRPRQQ
Trigger: CTGCTGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318809.11
ENST00000597816.5
ENST00000599724.5
ENST00000622457.1
CDS GCA 90 bp TTGTACCGATGCACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGC +
Preference number: 5 (lower is better)
Translates to: LYRCTPAAVCGSSSR*CNSMSSPGPCSHTR
Trigger: GCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGTGCATCGGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598178.1
CDS-3UTR CAA 90 bp GCTCTGGCCTCCTGGAGCGTCAGTGGCTGCCAGTTGAGGGACACCTGTCTCTTCGGGTATGAACTCCCCTaGACACTCCCCTATTCTAGA +
Preference number: 5 (lower is better)
Translates to: ALASWSVSGCQLRDTCLFGYELP*TLPYSR
Trigger: TCTAGAATAGGGGAGTGTCAAGGGGAGTTCATACCC...GAAGAGACAGGTGTCCCTCAACTGGCAGCCACTGACGCTCCAGGAGGCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS GCA 90 bp AATAGCATGAGTAGCCCGGGGCCGTGTTCACACACACGCCACTCTTaGACACCTGGTCTCGGAAGAGCTGACATTCGTCCACGTCTGTCT +
Preference number: 5 (lower is better)
Translates to: NSMSSPGPCSHTRHS*TPGLGRADIRPRLS
Trigger: AGACAGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594116.1
CDS CCA 90 bp AACAGCAACGCCTTCCACGATGTGTGTCCAGAAGCCAGCGTTTCTTaGTCTTTGGGCCTCAGTTTCCCGCCTGACCAGGAGAAAGGTGCC +
Preference number: 5 (lower is better)
Translates to: NSNAFHDVCPEASVS*SLGLSFPPDQEKGA
Trigger: GGCACCTTTCTCCTGGTCAGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGCTGGCTTCTGGACACACATCGTGGAAGGCGTTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS-3UTR CAA 90 bp TTGCCAGCGAAGTCCGGGGGACAGAGGCAGCGGTCAGGCTTCACGCACACACCGTTTTACGTCTCCCATTaGTGTTCCAGATTCTCTGAT +
Preference number: 5 (lower is better)
Translates to: LPAKSGGQRQRSGFTHTPFYVSH*CSRFSD
Trigger: ATCAGAGAATCTGGAACACAAATGGGAGACGTAAAA...CGGTGTGTGCGTGAAGCCTGACCGCTGCCTCTGTCCCCCGGACTTCGCTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 90 bp CTCATCCACATCTTCGCAGGACCCATTAACTCTTTCAAAGCCGGTTaGACAAGGTCCATCTGGGGCGCTCACTCTTTCGGAGTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: LIHIFAGPINSFKAG*TRSIWGAHSFGVPQ
Trigger: CTGGGGAACTCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAGTTAATGGGTCCTGCGAAGATGTGGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 90 bp CACCCTTTCCCATTTCTCTTCCCAGCACATTGGCAGTGTGATGGATaGAGTCTAGACTCCAGGAAAGACTTCCCGCTGGTGGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: HPFPFLFPAHWQCDG*SLDSRKDFPLVVAT
Trigger: TGTGGCCACCACCAGCGGGAAGTCTTTCCTGGAGTCTAGACTCCATCCATCACACTGCCAATGTGCTGGGAAGAGAAATGGGAAAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598178.1
CDS GCA 90 bp CCATCTTTCATGACTCAGCCTTTCTGTTTCCCATCACTTGGCCTCTaGATCCCAGGTCTCTCTCTACTGCCATCAGGCCACACGTCTGCT +
Preference number: 5 (lower is better)
Translates to: PSFMTQPFCFPSLGL*IPGLSLLPSGHTSA
Trigger: AGCAGACGTGTGGCCTGATGGCAGTAGAGAGAGACCTGGGATGCAGAGGCCAAGTGATGGGAAACAGAAAGGCTGAGTCATGAAAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598055.1
CDS CCA 90 bp TGCTTCTCCATCTTTCATGACTCAGCCTTTCTGTTTCCCATCACTTaGCCTCTGCATCCCAGGTCTCTCTCTACTGCCATCAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: CFSIFHDSAFLFPIT*PLHPRSLSTAIRPH
Trigger: GTGTGGCCTGATGGCAGTAGAGAGAGACCTGGGATGCAGAGGCCAAGTGATGGGAAACAGAAAGGCTGAGTCATGAAAGATGGAGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598055.1
CDS GCA 90 bp TCTCCTGCCATTATGGATTTCTTGGAACGCAAACAAACCTTCCAGTaGTCTGGAAGGGCGGATAGTCCAGGATCTCTCCCATTCTCTAGA +
Preference number: 5 (lower is better)
Translates to: SPAIMDFLERKQTFQ*SGRADSPGSLPFSR
Trigger: TCTAGAGAATGGGAGAGATCCTGGACTATCCGCCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 90 bp CCAGATTCTCTGATAATCCGGAATCTCCTGCCATTATGGATTTCTTaGAACGCAAACAAACCTTCCAGTGCTCTGGAAGGGCGGATAGTC +
Preference number: 5 (lower is better)
Translates to: PDSLIIRNLLPLWIS*NANKPSSALEGRIV
Trigger: GACTATCCGCCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATTCCGGATTATCAGAGAATCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS GCA 90 bp TCCTTTCTGTATCCTATAATTCTCAGCATTCCAGACATCCTGGCATaGAAGATATTCCTACCGGTGGAGATTCATGGGTATGAACTCCCC +
Preference number: 5 (lower is better)
Translates to: SFLYPIILSIPDILA*KIFLPVEIHGYELP
Trigger: GGGGAGTTCATACCCATGAATCTCCACCGGTAGGAATATCTTGCATGCCAGGATGTCTGGAATGCTGAGAATTATAGGATACAGAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 90 bp ATTTGTGTTCCAGATTCTCTGATAATCCGGAATCTCCTGCCATTATaGATTTCTTGGAACGCAAACAAACCTTCCAGTGCTCTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: ICVPDSLIIRNLLPL*ISWNANKPSSALEG
Trigger: CCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATTCCGGATTATCAGAGAATCTGGAACACAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 72 bp GCCAGGGCTCAGGCCCGGGGCCGTGCGGGCGCACAGTaGTGCGGCTGGTGCGTGGGTGCGAATCCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: ARAQARGRAGAQ*CGWCVGANPGR
Trigger: CCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCCGGGCCTGAGCCCTGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS GCA 72 bp GCCCGGGGCCGTGCGGGCGCACAGTGGTGCGGCTGGTaGGTGGGTGCGAATCCCGGGCGGCAGATGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ARGRAGAQWCGW*VGANPGRQMQR
Trigger: CCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS GCA 72 bp AGGGCTCAGGCCCGGGGCCGTGCGGGCGCACAGTGGTaGGGCTGGTGCGTGGGTGCGAATCCCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: RAQARGRAGAQW*GWCVGANPGRQ
Trigger: CTGCCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCCGGGCCTGAGCCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS CCA 72 bp CAGGCCCGGGGCCGTGCGGGCGCACAGTGGTGCGGCTaGTGCGTGGGTGCGAATCCCGGGCGGCAGATGCAG +
Preference number: 6 (lower is better)
Translates to: QARGRAGAQWCG*CVGANPGRQMQ
Trigger: CTGCATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCCGGGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS TCA 72 bp GCCCATGGACGCAGCGCAGGCCGCACACGACCGGGGTaGAGCGCACGCGGAGACGCTCTCCGAGCCGGCCCA +
Preference number: 6 (lower is better)
Translates to: AHGRSAGRTRPG*SARGDALRAGP
Trigger: TGGGCCGGCTCGGAGAGCGTCTCCGCGTGCGCTTCACCCCGGTCGTGTGCGGCCTGCGCTGCGTCCATGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS GCA 72 bp AGCGGCGGGTGTCCCGGGACCGATAGGGCCAGCGGGTaGCCGGGCCAGGTGGCGCAGGAGCCTCAGATTCGC +
Preference number: 6 (lower is better)
Translates to: SGGCPGTDRASG*PGQVAQEPQIR
Trigger: GCGAATCTGAGGCTCCTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATCGGTCCCGGGACACCCGCCGCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 72 bp GGGGCCGTGCGGGCGCACAGTGGTGCGGCTGGTGCGTaGGTGCGAATCCCGGGCGGCAGATGCAGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: GAVRAHSGAAGA*VRIPGGRCSGR
Trigger: CCTTCCGCTGCATCTGCCGCCCGGGATTCGCACCCACGCACCAGCCGCACCACTGTGCGCCCGCACGGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
CDS CCA 72 bp GTGGCACTCGTCCACATCCAGGCATTCCGCAGCCCGTaGGCCGGCTCGGAAGCCCGGGCCGCACACGCAGCG +
Preference number: 6 (lower is better)
Translates to: VALVHIQAFRSP*AGSEARAAHAA
Trigger: CGCTGCGTGTGCGGCCCGGGCTTCCGAGCCGGCCCACGGGCTGCGGAATGCCTGGATGTGGACGAGTGCCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp CCGGGACCGATAGGGCCAGCGGGTGCCCGGGCCAGGTaGCGCAGGAGCCTCAGATTCGCCATAGGGGCCACC +
Preference number: 6 (lower is better)
Translates to: PGPIGPAGARAR*RRSLRFAIGAT
Trigger: GGTGGCCCCTATGGCGAATCTGAGGCTCCTGCGCCACCTGGCCCGGGCACCCGCTGGCCCTATCGGTCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 72 bp GGTGGCCTGGCGGGCAGAACGGGGCTAGCAGGTGCCTaGGGCTGCGAGCCTGGGAACGTGCCTGGGGAGACA +
Preference number: 6 (lower is better)
Translates to: GGLAGRTGLAGA*GCEPGNVPGET
Trigger: TGTCTCCCCAGGCACGTTCCCAGGCTCGCAGCCCCAGGCACCTGCTAGCCCCGTTCTGCCCGCCAGGCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594116.1
CDS GCA 72 bp ACGCGGAGACGCTCTCCGAGCCGGCCCAGTCCAGGCTaGGGCCCTAGCTGCGCCAGCAGCACCAATAGCGAC +
Preference number: 6 (lower is better)
Translates to: TRRRSPSRPSPG*GPSCASSTNSD
Trigger: GTCGCTATTGGTGCTGCTGGCGCAGCTAGGGCCGCAGCCTGGACTGGGCCGGCTCGGAGAGCGTCTCCGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS CCA 72 bp GGATCGGGCCGGGGTTCAGGCCGGGGCTCCAGGCGATaGGTGGGCAGAAAGCCTGCAGATGGCCGAGAGGTG +
Preference number: 6 (lower is better)
Translates to: GSGRGSGRGSRR*VGRKPADGREV
Trigger: CACCTCTCGGCCATCTGCAGGCTTTCTGCCCACCCATCGCCTGGAGCCCCGGCCTGAACCCCGGCCCGATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS TCA 72 bp ATGGCCGAGAGGTGGCTGGCAGGGTACGAGGCTGGCTaGGTGACACTCGGGGTGGCTCCTGGCCCAGGGGTC +
Preference number: 6 (lower is better)
Translates to: MAERWLAGYEAG*VTLGVAPGPGV
Trigger: GACCCCTGGGCCAGGAGCCACCCCGAGTGTCACTCAGCCAGCCTCGTACCCTGCCAGCCACCTCTCGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS GCA 72 bp AGTCGCAAGCGCAGGTGTAGCCGCTGGGCCGGGAAATaGAGCGTCCTGGGCCGCAGACCTGGGGGTTGCGCT +
Preference number: 6 (lower is better)
Translates to: SRKRRCSRWAGK*SVLGRRPGGCA
Trigger: AGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCGCTTGCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 72 bp TCTCCGAGCCGGCCCAGTCCAGGCTGCGGCCCTAGCTaGGCCAGCAGCACCAATAGCGACACCCAGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SPSRPSPGCGPS*ASSTNSDTQSS
Trigger: GCTGCTCTGGGTGTCGCTATTGGTGCTGCTGGCGCAGCTAGGGCCGCAGCCTGGACTGGGCCGGCTCGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396819.8
CDS GCA 72 bp CTGGCAAAGGTCCTCCTCGCTGCACTCGTCAACGTCTaGGGGACAGGGCGTCCGAAGGCCCGGCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: LAKVLLAALVNV*GTGRPKARPTS
Trigger: GGAGGTGGGCCGGGCCTTCGGACGCCCTGTCCCGCAGACGTTGACGAGTGCAGCGAGGAGGACCTTTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595118.5
ENST00000602251.5
ENST00000622565.4
CDS CCA 72 bp GCAGGTGTAGCCGCTGGGCCGGGAAATGCAGCGTCCTaGGCCGCAGACCTGGGGGTTGCGCTGACACATGCC +
Preference number: 6 (lower is better)
Translates to: AGVAAGPGNAAS*AADLGVALTHA
Trigger: GGCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCGGCTACACCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp GCCGGAAGCCAGAGTCGCAAGCGCAGGTGTAGCCGCTaGGCCGGGAAATGCAGCGTCCTGGGCCGCAGACCT +
Preference number: 6 (lower is better)
Translates to: AGSQSRKRRCSR*AGKCSVLGRRP
Trigger: AGGTCTGCGGCCCAGGACGCTGCATTTCCCGGCCCAGCGGCTACACCTGCGCTTGCGACTCTGGCTTCCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp GGTGGCCTGGCGGGCAGAACGGGGCTAGCAGGTGCCTaGGGCTGCGAGCCTGGGAACGTGCCAGCAGAAGTT +
Preference number: 6 (lower is better)
Translates to: GGLAGRTGLAGA*GCEPGNVPAEV
Trigger: AACTTCTGCTGGCACGTTCCCAGGCTCGCAGCCCCAGGCACCTGCTAGCCCCGTTCTGCCCGCCAGGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000596351.5
ENST00000597071.5
ENST00000601032.5
CDS CCA 72 bp GACTGGTACTCAGCTGTCTCGGTGCCCGGGCACTGCTaGATGCGGCAGCCGCTGCCCCAGCCCTCACCCACA +
Preference number: 6 (lower is better)
Translates to: DWYSAVSVPGHC*MRQPLPQPSPT
Trigger: TGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGTACCAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 72 bp CATTCGTCCACGTCTGTCTCGGTGCCCGGGCACTGCTaGATGCGGCAGCCGCTGCCCCAGCCCTCACCCACA +
Preference number: 6 (lower is better)
Translates to: HSSTSVSVPGHC*MRQPLPQPSPT
Trigger: TGTGGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGACGTGGACGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594116.1
CDS CAA 90 bp GGCAGCGAACAGCCGCCGTCGCGGAGCACGCGGAAGCAGGGCCCTTaGGCCTCTGAGATCACGTGTTGGGAGATGCAGCTGCTGCGGGAC +
Preference number: 6 (lower is better)
Translates to: GSEQPPSRSTRKQGP*ASEITCWEMQLLRD
Trigger: GTCCCGCAGCAGCTGCATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCGCGTGCTCCGCGACGGCGGCTGTTCGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS TCA 72 bp ACTGGGCGCCAGGTAGCCCCGGCCGTGAGGGCACAATaGCTGGTACTCAGCTGTCTCGGTGCCCGGGCACTG +
Preference number: 6 (lower is better)
Translates to: TGRQVAPAVRAQ*LVLSCLGARAL
Trigger: CAGTGCCCGGGCACCGAGACAGCTGAGTACCAGTCATTGTGCCCTCACGGCCGGGGCTACCTGGCGCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS TCA 72 bp TCATGTCCAGGCGGTAGCCGTCGAAGCAACGGCAGGTaGAGCCTTCGGGGACGCGCACGCAGCGGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: SCPGGSRRSNGR*SLRGRARSGRW
Trigger: CCAACGGCCGCTGCGTGCGCGTCCCCGAAGGCTTCACCTGCCGTTGCTTCGACGGCTACCGCCTGGACATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000598166.2
ENST00000599225.1
CDS GCA 72 bp AATGACTGGTACTCAGCTGTCTCGGTGCCCGGGCACTaGTGGATGCGGCAGCCGCTGCCCCAGCCCTCACCC +
Preference number: 6 (lower is better)
Translates to: NDWYSAVSVPGH*WMRQPLPQPSP
Trigger: GGGTGAGGGCTGGGGCAGCGGCTGCCGCATCCAGCAGTGCCCGGGCACCGAGACAGCTGAGTACCAGTCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS GCA 72 bp TCGAGGCTCTGGCTCTCGTTGGAGACGCAGCGGCGCTaGGAGCCATCCAGCACCAGTGGGGGCTCGCAGGTA +
Preference number: 6 (lower is better)
Translates to: SRLWLSLETQRR*EPSSTSGGSQV
Trigger: TACCTGCGAGCCCCCACTGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCCTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CCA 72 bp CACTGGAAGGAGCCGGGCAGGTTCTGGCACACGGCGTaGGCACCGCAGAAGGACCGGTTCCGGCATTCGTCC +
Preference number: 6 (lower is better)
Translates to: HWKEPGRFWHTA*APQKDRFRHSS
Trigger: GGACGAATGCCGGAACCGGTCCTTCTGCGGTGCCCACGCCGTGTGCCAGAACCTGCCCGGCTCCTTCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
ENST00000617753.4
ENST00000618486.4
ENST00000622107.4
ENST00000622457.1
ENST00000622565.4
CDS CCA 72 bp GCACTCGTCCACATCTGTAGGCACAGACCAGGCGGCTaGGACTGGGGCAGACAGCCCCGGGAGAAGCGACGC +
Preference number: 6 (lower is better)
Translates to: ALVHICRHRPGG*DWGRQPREKRR
Trigger: GCGTCGCTTCTCCCGGGGCTGTCTGCCCCAGTCCCAGCCGCCTGGTCTGTGCCTACAGATGTGGACGAGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546155.5
ENST00000598256.1
CDS CCA 72 bp CTGATGGACACCCACCCTGGCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCACAGGCTGGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LMDTHPGIRPLA*ADSQGHRLVCS
Trigger: GCTGCACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594448.5
ENST00000617753.4
CDS CAA 72 bp GCAGGGTTGGAATCGGGGTCGCGGTCAGGAGATTGGTaGCCGCAGTTGCAGGACAGTGGCGGGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: AGLESGSRSGDW*PQLQDSGGAWG
Trigger: CCCCCAGGCCCCGCCACTGTCCTGCAACTGCGGCAACCAATCTCCTGACCGCGACCCCGATTCCAACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546155.5
CDS GCA 72 bp GCATTCATCCACATCCTGGCAGCTGGCTCCGTGCGGTaGAGCCTGGTACCCGGCGGGGCACACGCACAGGAA +
Preference number: 6 (lower is better)
Translates to: AFIHILAAGSVR*SLVPGGAHAQE
Trigger: TTCCTGTGCGTGTGCCCCGCCGGGTACCAGGCTGCACCGCACGGAGCCAGCTGCCAGGATGTGGATGAATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000598256.1
CDS GCA 72 bp CGAGGTCCGGGCCAGCGCGGTGTCCCGGAGGACAGATaGACTCGAAGGAGCCGTCGGTGTTGGTACAGATGC +
Preference number: 6 (lower is better)
Translates to: RGPGQRGVPEDR*TRRSRRCWYRC
Trigger: GCATCTGTACCAACACCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGGACACCGCGCTGGCCCGGACCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000595118.5
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000602251.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
ENST00000618486.4
ENST00000622565.4
CDS GCA 72 bp CTGTGTAGGTGGCCTGACGGTCCAGCCGAGGGTGGCTaGACACGAGGTCAGCCCCCACTTCCTGCCAGCACA +
Preference number: 6 (lower is better)
Translates to: LCRWPDGPAEGG*TRGQPPLPAST
Trigger: TGTGCTGGCAGGAAGTGGGGGCTGACCTCGTGTGCAGCCACCCTCGGCTGGACCGTCAGGCCACCTACACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS GCA 72 bp ACCATCGTCCTCAAAGTCTGGCATGTCGAAGCGGGGTaGCCCATAAGGAGCCTCCCGGCGGGCGAAGGGCCC +
Preference number: 6 (lower is better)
Translates to: TIVLKVWHVEAG*PIRSLPAGEGP
Trigger: GGGCCCTTCGCCCGCCGGGAGGCTCCTTATGGGGCACCCCGCTTCGACATGCCAGACTTTGAGGACGATGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000601032.5
CDS CCA 72 bp AGCCGCCGTCGCGGAGCACGCGGAAGCAGGGCCCTTTaGCCTCTGAGATCACGTGTTGGGAGATGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SRRRGARGSRAL*PLRSRVGRCSC
Trigger: GCAGCTGCATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCGCGTGCTCCGCGACGGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS CCA 72 bp GGCATTCGTCCACATCCTGGCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCACAGGCTGGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: GIRPHPGIRPLA*ADSQGHRLVCS
Trigger: GCTGCACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGATGTGGACGAATGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000622457.1
CDS CCA 72 bp ATTCGTCCACGTCTCTCCGGAGGCTCAGGTCTCCACTaGGCGCCAGGTAGCCCCGGCCGTGAGGGCACAATG +
Preference number: 6 (lower is better)
Translates to: IRPRLSGGSGLH*APGSPGREGTM
Trigger: CATTGTGCCCTCACGGCCGGGGCTACCTGGCGCCCAGTGGAGACCTGAGCCTCCGGAGAGACGTGGACGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000598178.1
ENST00000601032.5
CDS CCA 72 bp CAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTGGCC +
Preference number: 6 (lower is better)
Translates to: QKARMQRLLLDV*PGQQRQTATLA
Trigger: GGCCAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308370.11
CDS CCA 72 bp GTGGCAGGGTTGGAATCGGGGTCGCGGTCAGGAGATTaGTTGCCGCAGTTGCAGGACAGTGGCGGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VAGLESGSRSGD*LPQLQDSGGAW
Trigger: CCAGGCCCCGCCACTGTCCTGCAACTGCGGCAACCAATCTCCTGACCGCGACCCCGATTCCAACCCTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546155.5
CDS CCA 72 bp GCCGCCGCTTCAGTAGAGCTCTGGCCTCCTGGAGCCTaGGTGGGAGAGGACGGAAAAGCTGCTGTCACCGGG +
Preference number: 6 (lower is better)
Translates to: AAASVELWPPGA*VGEDGKAAVTG
Trigger: CCCGGTGACAGCAGCTTTTCCGTCCTCTCCCACCCAGGCTCCAGGAGGCCAGAGCTCTACTGAAGCGGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593738.1
ENST00000598717.5
CDS CAA 72 bp CAGCCGCCGTCGCGGAGCACGCGGAAGCAGGGCCCTTaGGCCTCTGAGATCACGTGTTGGGAGATGCAGCTG +
Preference number: 6 (lower is better)
Translates to: QPPSRSTRKQGP*ASEITCWEMQL
Trigger: CAGCTGCATCTCCCAACACGTGATCTCAGAGGCCAAAGGGCCCTGCTTCCGCGTGCTCCGCGACGGCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS CAA 90 bp ACTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTCGGATGCAGCGG +
Preference number: 6 (lower is better)
Translates to: TAGTGFRHRWGPAHF*GWQLRTLQKARMQR
Trigger: CCGCTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS GCA 72 bp GGGAAATGCAGCGTCCTGGGCCGCAGACCTGGGGGTTaGGCTGACACATGCCGGAGGAGGGACCTGATTCAG +
Preference number: 6 (lower is better)
Translates to: GKCSVLGRRPGG*ADTCRRRDLIQ
Trigger: CTGAATCAGGTCCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCATTTCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 72 bp CTCGGCTCTCCTAGGCCTCTCACGCCTTCCCCAACCTaGCTCACGCTACTTCCCTCCCTGCAAACACCGCCC +
Preference number: 6 (lower is better)
Translates to: LGSPRPLTPSPT*LTLLPSLQTPP
Trigger: GGGCGGTGTTTGCAGGGAGGGAAGTAGCGTGAGGCAGGTTGGGGAAGGCGTGAGAGGCCTAGGAGAGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000595118.5
ENST00000602251.5
ENST00000622565.4
CDS CCA 72 bp CTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCCTGCAGAAGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: LGSGTAGGLHTF*AGSFGPCRRLR
Trigger: CCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 72 bp CGGCGACATTCGTCCACATCAATGCATCGGGTGCCCTaGGGGCTGAGCCGGAAGCCAGAGTCGCAAGCGCAG +
Preference number: 6 (lower is better)
Translates to: RRHSSTSMHRVP*GLSRKPESQAQ
Trigger: CTGCGCTTGCGACTCTGGCTTCCGGCTCAGCCCCCAGGGCACCCGATGCATTGATGTGGACGAATGTCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp GTTCCGGCATTCGTCCACATCCTGGCATCCGCCCCCTaGCGTGGGCTGATAGCCAGGGTCACAGGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: VPAFVHILASAP*RGLIARVTGWC
Trigger: ACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGATGTGGACGAATGCCGGAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000622457.1
CDS CCA 72 bp GGAGACGCAGCGGCGCTGCGAGCCATCCAGCACCAGTaGGGGCTCGCAGGTACAGTGATAAGAGCCCACAGT +
Preference number: 6 (lower is better)
Translates to: GDAAALRAIQHQ*GLAGTVIRAHS
Trigger: ACTGTGGGCTCTTATCACTGTACCTGCGAGCCCCCACTGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CCA 72 bp CTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTTaGGCTGGCAGCTTCGGACCCTGCAGAAGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: LGSGTAGGLHTF*AGSFGPCRRLG
Trigger: TCCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS CCA 72 bp CACACTCGTTCACATCCTGGCATCCGCCCCCTGGCGTaGGCTGATAGCCAGGGTCACAGGCTGGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: HTRSHPGIRPLA*ADSQGHRLVCS
Trigger: GCTGCACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGATGTGAACGAGTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000593463.5
ENST00000595665.1
ENST00000597071.5
ENST00000600499.5
CDS CCA 72 bp CAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCCTGTG +
Preference number: 6 (lower is better)
Translates to: QKARMQRLLLDV*PGQQRQTATPV
Trigger: CACAGGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599016.5
CDS CCA 72 bp CAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCCTTCC +
Preference number: 6 (lower is better)
Translates to: QKARMQRLLLDV*PGQQRQTATPS
Trigger: GGAAGGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS CAA 72 bp ACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: TGFRHRWGPAHF*GWQLRTLQKAR
Trigger: CCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS CAA 72 bp TGTGGCAGGGTTGGAATCGGGGTCGCGGTCAGGAGATaGGTTGCCGCAGTTGCAGGACAGTGGCGGGGCCTG +
Preference number: 6 (lower is better)
Translates to: CGRVGIGVAVRR*VAAVAGQWRGL
Trigger: CAGGCCCCGCCACTGTCCTGCAACTGCGGCAACCAATCTCCTGACCGCGACCCCGATTCCAACCCTGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546155.5
CDS CAA 90 bp ACTGCAGGCACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTTCGGAGACAGCC +
Preference number: 6 (lower is better)
Translates to: TAGTGFRHRWGPAHF*GWQLRTLQKASETA
Trigger: GGCTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGTGCCTGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CAA 90 bp GCGCGGTGTCCCGGAGGACAGATGCACTCGAAGGAGCCGTCGGTGTaGGTACAGATGCCGCTCTGGCAAAGGTCCTCCTCGCTGCACTCG +
Preference number: 6 (lower is better)
Translates to: ARCPGGQMHSKEPSV*VQMPLWQRSSSLHS
Trigger: CGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCAACACCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGGACACCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000595118.5
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000602251.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
ENST00000618486.4
ENST00000622565.4
CDS TCA 72 bp ATGCAGCGTCCTGGGCCGCAGACCTGGGGGTTGCGCTaGCACATGCCGGAGGAGGGACCTGATTCAGGAATC +
Preference number: 6 (lower is better)
Translates to: MQRPGPQTWGLR*HMPEEGPDSGI
Trigger: GATTCCTGAATCAGGTCCCTCCTCCGGCATGTGTCAGCGCAACCCCCAGGTCTGCGGCCCAGGACGCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS GCA 72 bp CTGATTCAGGAATCTCAGGACCAGTCCAGGCAGGGATaGTGGGCAAGGGAAGCTCAGGGCCGGGCCGGGGAT +
Preference number: 6 (lower is better)
Translates to: LIQESQDQSRQG*WAREAQGRAGD
Trigger: ATCCCCGGCCCGGCCCTGAGCTTCCCTTGCCCAGCATCCCTGCCTGGACTGGTCCTGAGATTCCTGAATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS GCA 72 bp TGGTACAGATGCCGCTCTGGCAAAGGTCCTCCTCGCTaGACTCGTCAACGTCGAGGCAAGAGGCTCCGCGGG +
Preference number: 6 (lower is better)
Translates to: WYRCRSGKGPPR*TRQRRGKRLRG
Trigger: CCCGCGGAGCCTCTTGCCTCGACGTTGACGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
CDS GCA 72 bp CGAGGGTGGCTGCACACGAGGTCAGCCCCCACTTCCTaGCAGCACACTCCCAGATTGTCATCGAGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RGWLHTRSAPTS*QHTPRLSSRLW
Trigger: CCAGAGCCTCGATGACAATCTGGGAGTGTGCTGGCAGGAAGTGGGGGCTGACCTCGTGTGCAGCCACCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CCA 72 bp TTCAGGCACCGCTGGGGGCCTGCACACTTTTTGGGCTaGCAGCTTCGGACCCTGCAGAAGGCTCGGATGCAG +
Preference number: 6 (lower is better)
Translates to: FRHRWGPAHFLG*QLRTLQKARMQ
Trigger: CTGCATCCGAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308370.11
ENST00000594537.2
ENST00000599016.5
ENST00000600026.5
CDS CCA 72 bp CGCGACATTCGTCCACGTCTGAGGAGAGAGGTCGGGTaGTCGGATGTGGGAAGCAGGGAGGCAAGATGGGGG +
Preference number: 6 (lower is better)
Translates to: RDIRPRLRREVG*SDVGSREARWG
Trigger: CCCCCATCTTGCCTCCCTGCTTCCCACATCCGACCACCCGACCTCTCTCCTCAGACGTGGACGAATGTCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318809.11
ENST00000594448.5
ENST00000595665.1
ENST00000596351.5
ENST00000597816.5
ENST00000601464.5
ENST00000617753.4
ENST00000622107.4
CDS CAA 72 bp ACTGGGTTCAGGCACCGCTGGGGGCCTGCACACTTTTaGGGCTGGCAGCTTCGGACCCTGCAGAAGGCTTCG +
Preference number: 6 (lower is better)
Translates to: TGFRHRWGPAHF*GWQLRTLQKAS
Trigger: CGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAACCCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CAA 72 bp CACACTCCCAGATTGTCATCGAGGCTCTGGCTCTCGTaGGAGACGCAGCGGCGCTGCGAGCCATCCAGCACC +
Preference number: 6 (lower is better)
Translates to: HTPRLSSRLWLS*ETQRRCEPSST
Trigger: GGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCCTCGATGACAATCTGGGAGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CAA 72 bp CACAGCGGGGAGGCAGCCTCGGCCTCATCACACTCGTaGATGTCTGCGGAGGGGAGACAACGATCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: HSGEAASASSHS*MSAEGRQRSLL
Trigger: CAGCAGCGATCGTTGTCTCCCCTCCGCAGACATCAACGAGTGTGATGAGGCCGAGGCTGCCTCCCCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS CAA 90 bp GCGTTGACGCACAGCGGGGAGGCAGCCTCGGCCTCATCACACTCGTaGATGTCTGCGGAGGGGAGACAACGATCGCTGCTGAAGGCAACG +
Preference number: 6 (lower is better)
Translates to: ALTHSGEAASASSHS*MSAEGRQRSLLKAT
Trigger: CGTTGCCTTCAGCAGCGATCGTTGTCTCCCCTCCGCAGACATCAACGAGTGTGATGAGGCCGAGGCTGCCTCCCCGCTGTGCGTCAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598166.2
CDS TCA 72 bp ATTCGTCCACATCAATGCATCGGGTGCCCTGGGGGCTaGGCCGGAAGCCAGAGTCGCAAGCGCAGGTGTAGC +
Preference number: 6 (lower is better)
Translates to: IRPHQCIGCPGG*AGSQSRKRRCS
Trigger: GCTACACCTGCGCTTGCGACTCTGGCTTCCGGCTCAGCCCCCAGGGCACCCGATGCATTGATGTGGACGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS TCA 72 bp CACACGCCACTCTTGCACACCTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCTGTCTCGGTGCCCGGGCAC +
Preference number: 6 (lower is better)
Translates to: HTPLLHTWSRKS*HSSTSVSVPGH
Trigger: GTGCCCGGGCACCGAGACAGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594116.1
CDS TCA 72 bp TGGACCTTCTACCATCTCCACATCTCACCCGATGCCTaGTGGACACCCACCCTGGCATCCGCCCCCTGGCGT +
Preference number: 6 (lower is better)
Translates to: WTFYHLHISPDA*WTPTLASAPWR
Trigger: ACGCCAGGGGGCGGATGCCAGGGTGGGTGTCCATCAGGCATCGGGTGAGATGTGGAGATGGTAGAAGGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS GCA 72 bp GGCCTGCACACTTTTTGGGCTGGCAGCTTCGGACCCTaGAGAAGGCTTCGGAGACAGCCAGGGACTCGGATG +
Preference number: 6 (lower is better)
Translates to: GLHTFWAGSFGP*RRLRRQPGTRM
Trigger: CATCCGAGTCCCTGGCTGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS GCA 72 bp TGGCCTCTGAGATCACGTGTTGGGAGATGCAGCTGCTaGGGGACGAGTCGAGCAGAAAGCCGTCGGGGCACA +
Preference number: 6 (lower is better)
Translates to: WPLRSRVGRCSC*GTSRAESRRGT
Trigger: TGTGCCCCGACGGCTTTCTGCTCGACTCGTCCCGCAGCAGCTGCATCTCCCAACACGTGATCTCAGAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
ENST00000595529.1
CDS GCA 72 bp CTGCACTGGAAGGAGCCGGGCGAGTTCACACACTCCTaGCCAGGGCATGCGAGGTGGTTCTCACACTCATCC +
Preference number: 6 (lower is better)
Translates to: LHWKEPGEFTHS*PGHARWFSHSS
Trigger: GGATGAGTGTGAGAACCACCTCGCATGCCCTGGGCAGGAGTGTGTGAACTCGCCCGGCTCCTTCCAGTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS GCA 72 bp TGGTACAGATGCCGCTCTGGCAAAGGTCCTCCTCGCTaGACTCGTCAACGTCTGCGGGACAGGGCGTCCGAA +
Preference number: 6 (lower is better)
Translates to: WYRCRSGKGPPR*TRQRLRDRASE
Trigger: TTCGGACGCCCTGTCCCGCAGACGTTGACGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000595118.5
ENST00000602251.5
ENST00000622565.4
CDS CCA 72 bp CCAGGGACTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTTTTA +
Preference number: 6 (lower is better)
Translates to: PGTRMQRLLLDV*PGQQRQTATLL
Trigger: TAAAAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 72 bp TTCAGGCACCGCTGGGGGCCTGCACACTTTTTGGGCTaGCAGCTTCGGACCCTGCAGAAGGCTTCGGAGACA +
Preference number: 6 (lower is better)
Translates to: FRHRWGPAHFLG*QLRTLQKASET
Trigger: TGTCTCCGAAGCCTTCTGCAGGGTCCGAAGCTGCCAGCCCAAAAAGTGTGCAGGCCCCCAGCGGTGCCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204005.13
CDS CCA 72 bp GGGCTGCGAGCCTGGGAACGTGCCAGCAGAAGTTCGTaGGGGAACACAGCGTCCAGTCATGGGGTCAAACTC +
Preference number: 6 (lower is better)
Translates to: GLRAWERASRSS*GNTASSHGVKL
Trigger: GAGTTTGACCCCATGACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGGCACGTTCCCAGGCTCGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000596351.5
ENST00000597071.5
ENST00000601032.5
ENST00000612121.4
ENST00000618486.4
CDS CCA 72 bp ACACTCCCAGATTGTCATCGAGGCTCTGGCTCTCGTTaGAGACGCAGCGGCGCTGCGAGCCATCCAGCACCA +
Preference number: 6 (lower is better)
Translates to: TLPDCHRGSGSR*RRSGAASHPAP
Trigger: TGGTGCTGGATGGCTCGCAGCGCCGCTGCGTCTCCAACGAGAGCCAGAGCCTCGATGACAATCTGGGAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000595118.5
ENST00000597151.1
ENST00000599724.5
ENST00000601032.5
CDS CCA 72 bp GAGCAGTTTGGGGATAGGGCTCTGGTGTGGCAGGGTTaGAATCGGGGTCGCGGTCAGGAGATTGGTTGCCGC +
Preference number: 6 (lower is better)
Translates to: EQFGDRALVWQG*NRGRGQEIGCR
Trigger: GCGGCAACCAATCTCCTGACCGCGACCCCGATTCCAACCCTGCCACACCAGAGCCCTATCCCCAAACTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546155.5
CDS CAA 72 bp CCCGGAGGACAGATGCACTCGAAGGAGCCGTCGGTGTaGGTACAGATGCCGCTCTGGCAAAGGTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: PGGQMHSKEPSV*VQMPLWQRSSS
Trigger: CGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCAACACCGACGGCTCCTTCGAGTGCATCTGTCCTCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000595118.5
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000602251.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
ENST00000618486.4
ENST00000622565.4
CDS CCA 72 bp GGCGAGTTCACACACTCCTGCCCAGGGCATGCGAGGTaGTTCTCACACTCATCCACATCCTCGCACTCGGAG +
Preference number: 6 (lower is better)
Translates to: GEFTHSCPGHAR*FSHSSTSSHSE
Trigger: CTCCGAGTGCGAGGATGTGGATGAGTGTGAGAACCACCTCGCATGCCCTGGGCAGGAGTGTGTGAACTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS CCA 72 bp TGTTTCACACTCGTTCACATCCTGGCATCCGCCCCCTaGCGTGGGCTGATAGCCAGGGTCACAGGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: CFTLVHILASAP*RGLIARVTGWC
Trigger: ACACCAGCCTGTGACCCTGGCTATCAGCCCACGCCAGGGGGCGGATGCCAGGATGTGAACGAGTGTGAAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000593463.5
ENST00000595665.1
ENST00000597071.5
ENST00000600499.5
CDS CCA 72 bp CAGAAGGCTCGGATGCAGCGGCTCCTCCTAGACGTCTaGCCCGGGCAGCAGCGACAAACAGCAACGCTTTTA +
Preference number: 6 (lower is better)
Translates to: QKARMQRLLLDV*PGQQRQTATLL
Trigger: TAAAAGCGTTGCTGTTTGTCGCTGCTGCCCGGGCCAGACGTCTAGGAGGAGCCGCTGCATCCGAGCCTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CAA 72 bp ATCCACATCCTCGCACTCGGAGCCAGCAGTGTTGGGTaGGAAGCCCATGGGGCAGACACACTGGAAGCTGCC +
Preference number: 6 (lower is better)
Translates to: IHILALGASSVG*EAHGADTLEAA
Trigger: GGCAGCTTCCAGTGTGTCTGCCCCATGGGCTTCCAACCCAACACTGCTGGCTCCGAGTGCGAGGATGTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS TCA 72 bp CAGGGGCACAAGTACAGGCAAAGGAGCCGTCAGTGTTaGGGCACTCGCCGTGAGGGAAGCAGAAATCGCCCT +
Preference number: 6 (lower is better)
Translates to: QGHKYRQRSRQC*GTRREGSRNRP
Trigger: AGGGCGATTTCTGCTTCCCTCACGGCGAGTGCCTCAACACTGACGGCTCCTTTGCCTGTACTTGTGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000600499.5
ENST00000601032.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
CDS TCA 72 bp CACACGCCACTCTTGCACACCTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCTCTCCGGAGGCTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: HTPLLHTWSRKS*HSSTSLRRLRS
Trigger: AGACCTGAGCCTCCGGAGAGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000595118.5
ENST00000598178.1
ENST00000601032.5
CDS GCA 72 bp GAACTGCATTCGTCCACATCAGTGCATCTGCCACGGTaGAGGTGGTGGCCAGAAGGACAGGTCCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: ELHSSTSVHLPR*RWWPEGQVLHW
Trigger: CCAGTGCAGGACCTGTCCTTCTGGCCACCACCTGCACCGTGGCAGATGCACTGATGTGGACGAATGCAGTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000546155.5
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS GCA 72 bp AGATGCACTCGAAGGAGCCGTCGGTGTTGGTACAGATaGCGCTCTGGCAAAGGTCCTCCTCGCTGCACTCGT +
Preference number: 6 (lower is better)
Translates to: RCTRRSRRCWYR*RSGKGPPRCTR
Trigger: ACGAGTGCAGCGAGGAGGACCTTTGCCAGAGCGGCATCTGTACCAACACCGACGGCTCCTTCGAGTGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000595118.5
ENST00000597071.5
ENST00000599724.5
ENST00000600499.5
ENST00000601032.5
ENST00000602251.5
ENST00000610893.4
ENST00000612121.4
ENST00000612845.4
ENST00000618486.4
ENST00000622565.4
CDS GCA 72 bp AGTAGCCCGGGGCCGTGTTCACACACACGCCACTCTTaGACACCTGGTCTCGGAAGAGCTGACATTCGTCCA +
Preference number: 6 (lower is better)
Translates to: SSPGPCSHTRHS*TPGLGRADIRP
Trigger: TGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTGTGTGAACACGGCCCCGGGCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000598178.1
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS CCA 72 bp ACTCATCCACATCCTCGCACTCGGAGCCAGCAGTGTTaGGTTGGAAGCCCATGGGGCAGACACACTGGAAGC +
Preference number: 6 (lower is better)
Translates to: THPHPRTRSQQC*VGSPWGRHTGS
Trigger: GCTTCCAGTGTGTCTGCCCCATGGGCTTCCAACCCAACACTGCTGGCTCCGAGTGCGAGGATGTGGATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000598055.1
ENST00000598717.5
ENST00000601032.5
CDS CCA 72 bp CAGCAGAAGTTCGTGGGGGAACACAGCGTCCAGTCATaGGGTCAAACTCTTCCGGGCTGTTGGGGCAGACAC +
Preference number: 6 (lower is better)
Translates to: QQKFVGEHSVQS*GQTLPGCWGRH
Trigger: GTGTCTGCCCCAACAGCCCGGAAGAGTTTGACCCCATGACTGGACGCTGTGTTCCCCCACGAACTTCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 19 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000593463.5
ENST00000594448.5
ENST00000595118.5
ENST00000595665.1
ENST00000596351.5
ENST00000597071.5
ENST00000597816.5
ENST00000599724.5
ENST00000601032.5
ENST00000612121.4
ENST00000618486.4
ENST00000622107.4
ENST00000622457.1
ENST00000622565.4
CDS TCA 72 bp CACACGCCACTCTTGCACACCTGGTCTCGGAAGAGCTaGCATTCGTCCACGTCAGCAGAAGTTCGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: HTPLLHTWSRKS*HSSTSAEVRGG
Trigger: TCCCCCACGAACTTCTGCTGACGTGGACGAATGTCAGCTCTTCCGAGACCAGGTGTGCAAGAGTGGCGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318809.11
ENST00000597816.5
ENST00000599724.5
ENST00000622457.1
CDS GCA 72 bp ACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTGCTaGAATAGCATGAGTAGCCCGGGGCCGTGTTCACAC +
Preference number: 6 (lower is better)
Translates to: TPAAVCGSSSRC*NSMSSPGPCSH
Trigger: GTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000598178.1
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS GCA 72 bp TGCACTCCAGCCGCTGTGTGTGGTAGTAGTAGCCGTTaGTGCAATAGCATGAGTAGCCCGGGGCCGTGTTCA +
Preference number: 6 (lower is better)
Translates to: CTPAAVCGSSSR*CNSMSSPGPCS
Trigger: TGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAGCGGCTGGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000598178.1
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS CCA 72 bp CAACGCTGGGCTCCACAAATCTCGGGACCATATTCTTaGCACTCATCCACATCGTCACAGGTGCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: QRWAPQISGPYS*HSSTSSQVPSG
Trigger: CCCCGAGGGCACCTGTGACGATGTGGATGAGTGCCAAGAATATGGTCCCGAGATTTGTGGAGCCCAGCGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000594448.5
ENST00000595665.1
ENST00000597071.5
ENST00000600499.5
ENST00000602251.5
ENST00000617753.4
CDS CAA 72 bp GGGCACAGTGAGAGAGGCAATTGTGGAGGGCAGGGTTaGGTAGCGCAAGGGCAGAAAGGAGAGCTTTGGGGA +
Preference number: 6 (lower is better)
Translates to: GHSERGNCGGQG*VAQGQKGELWG
Trigger: TCCCCAAAGCTCTCCTTTCTGCCCTTGCGCTACCAAACCCTGCCCTCCACAATTGCCTCTCTCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546155.5
ENST00000598256.1
CDS TCA 72 bp CTGTGTGTGGTAGTAGTAGCCGTTGCTGCAATAGCATaGGTAGCCCGGGGCCGTGTTCACACACACGCCACT +
Preference number: 6 (lower is better)
Translates to: LCVVVVAVAAIA*VARGRVHTHAT
Trigger: AGTGGCGTGTGTGTGAACACGGCCCCGGGCTACTCATGCTATTGCAGCAACGGCTACTACTACCACACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000318809.11
ENST00000396819.8
ENST00000594116.1
ENST00000595118.5
ENST00000597816.5
ENST00000598178.1
ENST00000599724.5
ENST00000601032.5
ENST00000622457.1
CDS TCA 72 bp GGAGAGGACGGAAAAGCTGCTGTCACCGGGTTAAACTaGCCTCCCCACCAAAGGGCCTCCATGCCAGGAAAA +
Preference number: 6 (lower is better)
Translates to: GEDGKAAVTGLN*PPHQRASMPGK
Trigger: TTTTCCTGGCATGGAGGCCCTTTGGTGGGGAGGTCAGTTTAACCCGGTGACAGCAGCTTTTCCGTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000593738.1
ENST00000598717.5
CDS GCA 72 bp ACCGCAGAAGGACCGGTTCCGGCATTCGTCCACATCTaGAACCACCAGACAGTCAGGCCATTTCTGGACCTT +
Preference number: 6 (lower is better)
Translates to: TAEGPVPAFVHI*NHQTVRPFLDL
Trigger: AAGGTCCAGAAATGGCCTGACTGTCTGGTGGTTGCAGATGTGGACGAATGCCGGAACCGGTCCTTCTGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617753.4
CDS CAA 72 bp ACAACGCTGGGCTCCACAAATCTCGGGACCATATTCTaGGCACTCATCCACATCGTCACAGGTGCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: TTLGSTNLGTIF*ALIHIVTGALG
Trigger: CCCGAGGGCACCTGTGACGATGTGGATGAGTGCCAAGAATATGGTCCCGAGATTTGTGGAGCCCAGCGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000204005.13
ENST00000243562.13
ENST00000308370.11
ENST00000396819.8
ENST00000593463.5
ENST00000594448.5
ENST00000595665.1
ENST00000597071.5
ENST00000600499.5
ENST00000602251.5
ENST00000617753.4
CDS CAA 90 bp AACGCCTTCCACGATGTGTGTCCAGAAGCCAGCGTTTCTTGGTCTTaGGGCCTCAGTTTCCCGCCTGACCAGGAGAAAGGTGCCGTTCTT +
Preference number: 6 (lower is better)
Translates to: NAFHDVCPEASVSWS*GLSFPPDQEKGAVL
Trigger: AAGAACGGCACCTTTCTCCTGGTCAGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGCTGGCTTCTGGACACACATCGTGGAAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS CCA 72 bp ATTAACTCTTTCAAAGCCGGTTGGACAAGGTCCATCTaGGGCGCTCACTCTTTCGGAGTTCCCCAGGCGCTC +
Preference number: 6 (lower is better)
Translates to: INSFKAGWTRSI*GAHSFGVPQAL
Trigger: GAGCGCCTGGGGAACTCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAGTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp GAAGAGCTGACATTCGTCCACGTCAGCAGAAGTTCGTaGGGGAACACAGCGTCCAGTCATGGGGTCAAACTC +
Preference number: 6 (lower is better)
Translates to: EELTFVHVSRSS*GNTASSHGVKL
Trigger: GAGTTTGACCCCATGACTGGACGCTGTGTTCCCCCACGAACTTCTGCTGACGTGGACGAATGTCAGCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318809.11
ENST00000593463.5
ENST00000595665.1
ENST00000597816.5
ENST00000599724.5
ENST00000622107.4
ENST00000622457.1
ENST00000622565.4
CDS CCA 72 bp ACGATGTGTGTCCAGAAGCCAGCGTTTCTTGGTCTTTaGGCCTCAGTTTCCCGCCTGACCAGGAGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: TMCVQKPAFLGL*ASVSRLTRRKV
Trigger: CACCTTTCTCCTGGTCAGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGCTGGCTTCTGGACACACATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS CAA 72 bp CACGATGTGTGTCCAGAAGCCAGCGTTTCTTGGTCTTaGGGCCTCAGTTTCCCGCCTGACCAGGAGAAAGGT +
Preference number: 6 (lower is better)
Translates to: HDVCPEASVSWS*GLSFPPDQEKG
Trigger: ACCTTTCTCCTGGTCAGGCGGGAAACTGAGGCCCAAAGACCAAGAAACGCTGGCTTCTGGACACACATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594537.2
CDS CCA 72 bp ATCTTCGCAGGACCCATTAACTCTTTCAAAGCCGGTTaGACAAGGTCCATCTGGGGCGCTCACTCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: IFAGPINSFKAG*TRSIWGAHSFG
Trigger: TCCGAAAGAGTGAGCGCCCCAGATGGACCTTGTCCAACCGGCTTTGAAAGAGTTAATGGGTCCTGCGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000204005.13
ENST00000308370.11
ENST00000396819.8
CDS CCA 72 bp CCATTTCTCTTCCCAGCACATTGGCAGTGTGATGGATaGAGTCTAGACTCCAGGAAAGACTTCCCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PFLFPAHWQCDG*SLDSRKDFPLV
Trigger: CACCAGCGGGAAGTCTTTCCTGGAGTCTAGACTCCATCCATCACACTGCCAATGTGCTGGGAAGAGAAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598178.1
CDS CAA 90 bp GGTGTTCTCACAACGCTGGGCTCCACAAATCTCGGGACCATATTCTaGGCACTCATCCACATCTTTTCCAGACGCTGGCATAGAGTAGGT +
Preference number: 6 (lower is better)
Translates to: GVLTTLGSTNLGTIF*ALIHIFSRRWHRVG
Trigger: ACCTACTCTATGCCAGCGTCTGGAAAAGATGTGGATGAGTGCCAAGAATATGGTCCCGAGATTTGTGGAGCCCAGCGTTGTGAGAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601464.5
CDS CCA 72 bp CAACGCTGGGCTCCACAAATCTCGGGACCATATTCTTaGCACTCATCCACATCTTTTCCAGACGCTGGCATA +
Preference number: 6 (lower is better)
Translates to: QRWAPQISGPYS*HSSTSFPDAGI
Trigger: TATGCCAGCGTCTGGAAAAGATGTGGATGAGTGCCAAGAATATGGTCCCGAGATTTGTGGAGCCCAGCGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601464.5
CDS CAA 72 bp ACAACGCTGGGCTCCACAAATCTCGGGACCATATTCTaGGCACTCATCCACATCTTTTCCAGACGCTGGCAT +
Preference number: 6 (lower is better)
Translates to: TTLGSTNLGTIF*ALIHIFSRRWH
Trigger: ATGCCAGCGTCTGGAAAAGATGTGGATGAGTGCCAAGAATATGGTCCCGAGATTTGTGGAGCCCAGCGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601464.5
CDS GCA 72 bp ATTATGGATTTCTTGGAACGCAAACAAACCTTCCAGTaGTCTGGAAGGGCGGATAGTCCAGGATCTCTCCCA +
Preference number: 6 (lower is better)
Translates to: IMDFLERKQTFQ*SGRADSPGSLP
Trigger: TGGGAGAGATCCTGGACTATCCGCCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CAA 90 bp TCCAGATTCTCTGATAATCCGGAATCTCCTGCCATTATGGATTTCTaGGAACGCAAACAAACCTTCCAGTGCTCTGGAAGGGCGGATAGT +
Preference number: 6 (lower is better)
Translates to: SRFSDNPESPAIMDF*ERKQTFQCSGRADS
Trigger: ACTATCCGCCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATTCCGGATTATCAGAGAATCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CCA 72 bp CTGATAATCCGGAATCTCCTGCCATTATGGATTTCTTaGAACGCAAACAAACCTTCCAGTGCTCTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: LIIRNLLPLWIS*NANKPSSALEG
Trigger: CCCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATTCCGGATTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CAA 72 bp TCTGATAATCCGGAATCTCCTGCCATTATGGATTTCTaGGAACGCAAACAAACCTTCCAGTGCTCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: SDNPESPAIMDF*ERKQTFQCSGR
Trigger: CCTTCCAGAGCACTGGAAGGTTTGTTTGCGTTCCAAGAAATCCATAATGGCAGGAGATTCCGGATTATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600026.5
CDS CAA 72 bp AGCAGCGACAAACAGCAACGCTTTTACGTCTCCCATTaGTGTTCCAGATTCTCTGATAATCCGGAATCTCCT +
Preference number: 6 (lower is better)
Translates to: SSDKQQRFYVSH*CSRFSDNPESP
Trigger: AGGAGATTCCGGATTATCAGAGAATCTGGAACACAAATGGGAGACGTAAAAGCGTTGCTGTTTGTCGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600026.5