RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTBP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168056

Ensembl transcript IDs: ENST00000301873.11, ENST00000322147.8, ENST00000524798.1, ENST00000525443.1, ENST00000526124.1, ENST00000526825.5, ENST00000526927.5, ENST00000527339.1, ENST00000527792.5, ENST00000528516.5, ENST00000528966.5, ENST00000529189.5, ENST00000529582.5, ENST00000529764.1, ENST00000530785.5, ENST00000530866.5, ENST00000530990.1, ENST00000532661.5, ENST00000532932.5

Found 1142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCACTCGTCGATATCCACGCAGCGGGCGCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCGCACACGGCGCCGCCCGGCCGCGGC +
Preference number: 1 (lower is better)
Translates to: RHSSISTQRAREASS*KPPGHSHTAPPGRG
Trigger: GCCGCGGCCGGGCGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCGCTGCGTGGATATCGACGAGTGCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp GCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCT +
Preference number: 1 (lower is better)
Translates to: AGPARGPAHMPSSPR*LQHTSRRSGARSIS
Trigger: AGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp GGGGAACGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTaGAGACGCAGCGGAAGGAGCCGCTGGTGTTCACGCAGCGCTCGC +
Preference number: 1 (lower is better)
Translates to: GERRPRAGGCARSRL*RRSGRSRWCSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCGTTCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp CCCTTGTGCCGGGCTCAGTCTAGCCCCTGGGAGGCGGCTGGGGTCTaGCGCCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATC +
Preference number: 1 (lower is better)
Translates to: PLCRAQSSPWEAAGV*RRPAQPAPTSDVNI
Trigger: GATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGGCGCCAGACCCCAGCCGCCTCCCAGGGGCTAGACTGAGCCCGGCACAAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR CCA 90 bp TCGCGCCGCTCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCACAG +
Preference number: 1 (lower is better)
Translates to: SRRSGARSISSGLRH*RCAGLYSAGGVQAQ
Trigger: CTGTGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGAGCGGCGCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp GCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTTaGTGGCCACAGAGTCGCCCTCCGGAGCCAGGGGCGGCAGCGCCC +
Preference number: 1 (lower is better)
Translates to: AQEGQRSPGRRRWRA*WPQSRPPEPGAAAP
Trigger: GGGCGCTGCCGCCCCTGGCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAGAGTCGCCCTCCGGAGCCAGGGGCG +
Preference number: 1 (lower is better)
Translates to: PPRAQEGQRSPGRRR*RACWPQSRPPEPGA
Trigger: CGCCCCTGGCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp CTACGGCGCTGCGGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGGAGATCAGCTCGGGGTAGGGCCGGG +
Preference number: 1 (lower is better)
Translates to: LRRCGKEASPAGTSA*SGARDGRSARGRAG
Trigger: CCCGGCCCTACCCCGAGCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCCGCAGCGCCGTAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCG +
Preference number: 1 (lower is better)
Translates to: SGLKAPGGSAGPEGP*VRATSRGRSEAELA
Trigger: CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR CCA 90 bp CAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTTGCTaGCCACAGAGTCGCCCTCCGGAGCCAGGGGCGGCAGCGCCCCTG +
Preference number: 1 (lower is better)
Translates to: QEGQRSPGRRRWRAC*PQSRPPEPGAAAPL
Trigger: CAGGGGCGCTGCCGCCCCTGGCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 90 bp TACCCCCACCGGCTCCTCCTGCGGGCACCTGGCAGAAGCGCCCAGTaGAGTCCGGGGGACACAGGCACTGGTTTCGCGAGGAGCACTGGC +
Preference number: 1 (lower is better)
Translates to: YPHRLLLRAPGRSAQ*SPGDTGTGFARSTG
Trigger: GCCAGTGCTCCTCGCGAAACCAGTGCCTGTGTCCCCCGGACTTCACTGGGCGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGGGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 90 bp ACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCGAGGGCGGCGTCGGCGGCGTCAGCG +
Preference number: 1 (lower is better)
Translates to: TSRGRSEAELAEIPQ*SPRSGPRAASAASA
Trigger: CGCTGACGCCGCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp CCCAACAGCAGGGGGCTTGTGTCCCAGAAGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGACCCCGCGCCGCGCGGCGGGCACGGT +
Preference number: 1 (lower is better)
Translates to: PNSRGLVSQKELLSL*DVGQWDPAPRGGHG
Trigger: ACCGTGCCCGCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp CCGCTGGTGTTCACGCAGCGCTCGCTCTTGCACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCGTCGATATCCACGCAGCGGGCGCGG +
Preference number: 1 (lower is better)
Translates to: PLVFTQRSLLHSSPR*FSSRHSSISTQRAR
Trigger: CCGCGCCCGCTGCGTGGATATCGACGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGTGAACACCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp ACACTGCAGCAGCAGAGCTGGCGGGTCAGGCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGGCTCACCAGGCGGAAACACAGGCTC +
Preference number: 1 (lower is better)
Translates to: TLQQQSWRVRRVVSG*WHWCSGLTRRKHRL
Trigger: GAGCCTGTGTTTCCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACTGACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 90 bp CTGCAGCAGCAGAGCTGGCGGGTCAGGCGGGTGGTCAGTGGGTGCTaGCACTGGTGCTCAGGGCTCACCAGGCGGAAACACAGGCTCTTC +
Preference number: 1 (lower is better)
Translates to: LQQQSWRVRRVVSGC*HWCSGLTRRKHRLF
Trigger: GAAGAGCCTGTGTTTCCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACTGACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR GCA 90 bp AGACGCAGCGGAAGGAGCCGCTGGTGTTCACGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGTTCAGCTCTCGGCACTCGTCGATAT +
Preference number: 1 (lower is better)
Translates to: RRSGRSRWCSRSARS*TAARAGSALGTRRY
Trigger: ATATCGACGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCTGCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp GTGTCCTCAGGTGGTGGAGCCTGGCTAGGGCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCAGGGTGCAGGAAAAGGGAAAAGTCA +
Preference number: 1 (lower is better)
Translates to: VSSGGGAWLGLSGSC*GLGGPSGCRKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 90 bp GAAGCTCCCGGGCTTGTTCTCGCATTTGCCATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGATGTCTTCGCACACAGGAGGCCGGGA +
Preference number: 1 (lower is better)
Translates to: EAPGLVLAFAIRARA*VPALVDVFAHRRPG
Trigger: TCCCGGCCTCCTGTGTGCGAAGACATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCCCGGGAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp GCTTCTGCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCT +
Preference number: 1 (lower is better)
Translates to: ASALLCTAAGDTCGT*SGPRQCRCYRSSLP
Trigger: AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR GCA 90 bp CGTCCACGCATTCCAGCAGGTTCCCGTCGTAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAGGCTGCGTGTTCACGCACTTGCCCT +
Preference number: 1 (lower is better)
Translates to: RPRIPAGSRRSRSPA*SSTRSQAACSRTCP
Trigger: AGGGCAAGTGCGTGAACACGCAGCCTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACTACGACGGGAACCTGCTGGAATGCGTGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 90 bp AGCCGGCCCCCAGAGAGCAGCAGCACTCCTGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGAACACTGTGTCATCGAAGTTCAGGT +
Preference number: 1 (lower is better)
Translates to: SRPPESSSTPAGSRW*PIRCRRTLCHRSSG
Trigger: ACCTGAACTTCGATGACACAGTGTTCTGCGACAGCGTATTGGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTCTCTGGGGGCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 90 bp GGTGGCCCGTCAGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGGTATCCCTTC +
Preference number: 1 (lower is better)
Translates to: GGPSGCRKREKSLSP*MVSVWWEVRMWYPF
Trigger: GAAGGGATACCACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR GCA 90 bp CCTGCTTGCAGTAGCACTCGTAGCCAGGCTGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGA +
Preference number: 1 (lower is better)
Translates to: PACSSTRSQAACSRT*PPCKSPTRTTCTRR
Trigger: TCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCAGCCTGGCTACGAGTGCTACTGCAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 90 bp ACAACATGCACTCGTCGATGTCACGGTGGGCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGGCAGA +
Preference number: 1 (lower is better)
Translates to: TTCTRRCHGGLGCRS*RCCCPGCSPFRLGR
Trigger: TCTGCCCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCAGCCCACCGTGACATCGACGAGTGCATGTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp CAGAGAGGCACTGACACTGGAAAGATCCTGGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCCA +
Preference number: 1 (lower is better)
Translates to: QRGTDTGKILACCCR*HCHTRPQPHTRPHP
Trigger: TGGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAATGGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGTCAGTGCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp AGTAGCACTCGTAGCCAGGCTGCGTGTTCACGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGT +
Preference number: 1 (lower is better)
Translates to: SSTRSQAACSRTCPP*KSPTRTTCTRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCAGCCTGGCTACGAGTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 90 bp TCTGTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATCAATGTCCTCGCAGTGGCTCCGGTC +
Preference number: 1 (lower is better)
Translates to: SVGAIGIDAVTPNAG*REVTLINVLAVAPV
Trigger: GACCGGAGCCACTGCGAGGACATTGATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGGCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGG +
Preference number: 2 (lower is better)
Translates to: GQARPGGQRTCRPLRAGSAGTSA*SGARDG
Trigger: CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGC...GGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGCCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCCCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 2 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTGCAGACGCAGCGGATCAGGTGGTGGAGCCTaGCTAGGGCTCTCCGGAAGC +
Preference number: 2 (lower is better)
Translates to: RRPRAGGCARSRLCRRSGSGGGA*LGLSGS
Trigger: GCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA...TCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCAGCACACGTCGCGCCTCAATGCGGTGCACCTaGACTGAGGCCTCGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GGQRTCRPLRAGSSTRRASMRCT*TEASGG
Trigger: CCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGA...GGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR GCA 90 bp CTCGTCCACATCCAAGCAACTGCGGCCGTCGGGCGCGGGCGCGTAGCCCTGGGCCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LVHIQATAAVGRGRVALGRVVSG*WHWCSG
Trigger: CCCTGAGCACCAGTGCCAGCACCCACTGACCACCCG...GCCCAGGGCTACGCGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGGACGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCACAGGGCCCCTGTCCTaGTCAGGCCGGGGCCTGAGC +
Preference number: 2 (lower is better)
Translates to: LERSGAICWAALTPRAPGTGPLS*SGRGLS
Trigger: GCTCAGGCCCCGGCCTGAGCAGGACAGGGGCCCTGT...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GCCGCTCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTGGCGCTGCGCGGTTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 2 (lower is better)
Translates to: AAPGHAPSLPGSGTGAARFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...CCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGAGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp GGGCTCAGGCACTGGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCAGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: GLRHWRCAGLYSAGGVQAAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...TGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACGGCCGGGGAGGGGGTTaGTGCCACACGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHGRGGG*CHTAAW
Trigger: CCAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCC...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp GAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTTGGGTGCTGGCACTGGTaGTCAGGGCTCACCAGGCGG +
Preference number: 2 (lower is better)
Translates to: ERSGAICWAALTPRAPGLGCWHW*SGLTRR
Trigger: CCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCC...AAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 2 (lower is better)
Translates to: RAREASSWKPPGHSHTAPELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 2 (lower is better)
Translates to: GPWVRATSRGRSEAELAEVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR CCA 90 bp CGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTGCAGACGCAGCGGAGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 2 (lower is better)
Translates to: RRPRAGGCARSRLCRRSGEGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...TCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp GGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGAGATCAGCTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: GKSGRNQRMVGGEGREISLGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...GCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 2 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR CCA 90 bp GAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTTCAGGCGGGTGGTCAGTaGGTGCTGGCACTGGTGCTC +
Preference number: 2 (lower is better)
Translates to: ERSGAICWAALTPRAPGLQAGGQ*VLALVL
Trigger: GAGCACCAGTGCCAGCACCCACTGACCACCCGCCTG...AAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGGCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 2 (lower is better)
Translates to: GQARPGGQRTCRPLRAGSTLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...GGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: SRRREGLRALKVPGSEPQAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR CCA 90 bp GGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCAGCACACGTCGCGCCCCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 2 (lower is better)
Translates to: GGQRTCRPLRAGSSTRRAPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...GGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 2 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGGCCGGGGAGGGGGTTaGTGCCACACGGCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: CGTCSGPRQCRCYRSSLPGRGGG*CHTAAW
Trigger: CCAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCC...AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp GGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 2 (lower is better)
Translates to: GKEASPAGTSAWSGARDGTGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp CTCGTCCACATCCAAGCAACTGCGGCCGTCGGGCGCGGGCGCGTAGCCCTGGGCAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 2 (lower is better)
Translates to: LVHIQATAAVGRGRVALGSRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...GCCCAGGGCTACGCGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGGACGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LERSGAICWAALTPRAPGSWGHL*HLLWPQ
Trigger: CTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCT...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGGAAGCTGCTGGGGCTTaGGTGGCCCGTCAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHREAAGA*VARQGA
Trigger: TGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTC...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp CCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: PWRWPFPAAESPPHRCIYAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...ATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR TCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATCTGTTGGGCAGCGCTaGCACCGCGCGCCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRSVGQR*HRAPQA
Trigger: GGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGA...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR TCA 90 bp GCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTGCAAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: ARGRAGQESWWQLGGSAAKSLSP*MVSVWW
Trigger: CCACCAGACGCTCACCATTCAGGGCGAGAGTGACTT...TGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 2 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp TGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: CGTCSGPRQCRCYRSSLPCEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCACCCACCGGCTCCTCCTaGGGGCACCTGGCAGAAGCG +
Preference number: 2 (lower is better)
Translates to: TPVYCSWGHLWHLLWPQAPTGSS*GHLAEA
Trigger: CGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGG...TGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 2 (lower is better)
Translates to: PPCAARAHVRREHQFASKVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR CCA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGCCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAG +
Preference number: 2 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHRPGRRR*RACWPQ
Trigger: CTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGG...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGAGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATG +
Preference number: 2 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRAVHLD*GLGRVM
Trigger: CATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGC...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTATTTCACACCCCTTGTaGCGGGCTCAGTCTAGCCCC +
Preference number: 2 (lower is better)
Translates to: EPWRWPFPAAESPPHRCIISHPL*RAQSSP
Trigger: GGGGCTAGACTGAGCCCGGCACAAGGGGTGTGAAAT...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR CCA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCCACTCGTTGATGTCCTaGCAGTGGGTGCTGTTAAGC +
Preference number: 2 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFHSLMS*QWVLLS
Trigger: GCTTAACAGCACCCACTGCCAGGACATCAACGAGTG...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGCTCTGTGTCCTCAGGTaGTGGAGCCTGGCTAGGGCT +
Preference number: 2 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHRLCVLR*WSLARA
Trigger: AGCCCTAGCCAGGCTCCACCACCTGAGGACACAGAG...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CAA 90 bp GTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATaGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCA +
Preference number: 2 (lower is better)
Translates to: VALPGCGEPAPQMYL*YKPCEPGRPSQAIS
Trigger: TGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR TCA 90 bp CTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGCGAGGCCGGGAGGCTTTaGGCCGGTAGCCGGGGTAGC +
Preference number: 2 (lower is better)
Translates to: LLANLRPEQHALVDVTVGEAGRL*AGSRGS
Trigger: GCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTC...GCCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGTCTGGCCCCAGGCAGTaGCGATGCTACCGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMSGPRQ*RCYRSS
Trigger: ACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGA...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGACACACGCCCGGCATTaGGCACTCGTTGATGTCCTG +
Preference number: 2 (lower is better)
Translates to: HTAAWAECPESSGPGASGTHARH*ALVDVL
Trigger: CAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGT...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 2 (lower is better)
Translates to: HTAAWAECPESSGPGASGEGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp GTCCTGGGTGGGAGTGAAGCCCTCATCGCAGACACACACATAGGAGCCCTGAAGGGCGGGTCAGGCGGGTaGTCAGTGGGTGCTGGCACT +
Preference number: 2 (lower is better)
Translates to: VLGGSEALIADTHIGALKGGSGG*SVGAGT
Trigger: AGTGCCAGCACCCACTGACCACCCGCCTGACCCGCC...CTTCAGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGAGGAAGGCTGCGTGCTaGGCAGGAGGCCCCTCCCCG +
Preference number: 2 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGRKAAC*AGGPSP
Trigger: CGGGGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCT...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGCCCAGGCAGTGCCGATaGTACCGCAGCAGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLPRQCR*YRSSLP
Trigger: AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGG...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 2 (lower is better)
Translates to: HTAAWAECPESSGPGASGCTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 2 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp CTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGCAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 2 (lower is better)
Translates to: LLANLRPEQHALVDVTVGSPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...GCCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 2 (lower is better)
Translates to: RVQEKGKVTLALNGERLVVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp ATCGAAGTTCAGGTAGCACTCCTTCTTGTGGTGGGGCTGCTCCACCTCCTCACAGCGGTGCTGGGGATGTaGCCGGTAGCCGGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: IEVQVALLLVVGLLHLLTAVLGM*PVAGVA
Trigger: TGCAACCCCGGCTACCGGTCACATCCCCAGCACCGC...TGTGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTGCTACCTGAACTTCGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 2 (lower is better)
Translates to: SPPVCLQCTVYGRGLNYGVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...GCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCACCGCAGCAGTCTTCCTaGTTGGTGAGGCCGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPPQQSS*LVRPGR
Trigger: CCTCCCCGGCCTCACCAAGCAGGAAGACTGCTGCGG...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGCTGCAGCAGCAGAGCTaGCGGGTCAGGCGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: RVQEKGKVTLALNGERLVLQQQS*RVRRVV
Trigger: GACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR TCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTATTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVLGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp ACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATAGGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: TVYGRGLNYGQVGRHSDRDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...CCTATCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp TTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCCAAGCAACTGCGGCCGCCGGTTTGTCTGCAATaGACTGTGTACGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LSHTSPASHSSTSKQLRPPVCLQ*TVYGRG
Trigger: GCCCCTCCCGTACACAGTGCATTGCAGACAAACCGG...CGGCCGCAGTTGCTTGGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GTCCTGGGTGGGAGTGAAGCCCTCATCGCAGACACACACATAGGAGCCCTGAAGGAGCTCTCAATGCGGTaGACCTGGACTGAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: VLGGSEALIADTHIGALKELSMR*TWTEAS
Trigger: CGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTC...CTTCAGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCCGGTGTTCATGCAGATaGCCCTCCCCGGGCCACAGG +
Preference number: 2 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVRCSCR*PSPGHR
Trigger: CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCG...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp TGGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGCTGCTGGGGCTTGGGTaGCCCGTCAGGGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: WDAVVDDVVVLGVALSVWLLGLG*PVRVQE
Trigger: TTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAG...CCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp TTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCCAAGCAACTGCGGCCGGGCACGCACTCTCCGTaGCCACAGATGTTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: LSHTSPASHSSTSKQLRPGTHSP*PQMFWF
Trigger: GAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCC...CGGCCGCAGTTGCTTGGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp CCCGGCCGGCCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAAAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 2 (lower is better)
Translates to: PGRPSQAISRVHNQSHNKKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...TTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGGCCGGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR TCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 2 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR TCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGAGCGTCTGGTGGGAGGTaGGAATGTGGTATCCCTTCC +
Preference number: 2 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRASGGR*ECGIPS
Trigger: GGAAGGGATACCACATTCTCACCTCCCACCAGACGC...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR TCA 90 bp CTCACACACTCCGTTCCGGCAGTTGGACTCGTCCAGGCACTCGTCCACGTCCACACTCATCAGTCTCTGTaGCCTGAGTGGGAGCGATCT +
Preference number: 2 (lower is better)
Translates to: LTHSVPAVGLVQALVHVHTHQSL*PEWERS
Trigger: AGATCGCTCCCACTCAGGTCACAGAGACTGATGAGT...GTGGACGTGGACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGTGTGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGGTGGTGGCAGTTGGGTaGCTCTGCTGCACTGACCTC +
Preference number: 2 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGVVAVG*LCCTDL
Trigger: GAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCAC...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 2 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp CCAATACGCTGTCGCAGAACACTGTGTCATCGAAGTTCAGGTAGCACTCCTTCTTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: PIRCRRTLCHRSSGSTPSCEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...AGAAGGAGTGCTACCTGAACTTCGATGACACAGTGTTCTGCGACAGCGTATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGCCCAGGCAGTGCCGATaGTACCGCAGCAGTCTTCCT +
Preference number: 2 (lower is better)
Translates to: ETQALLLRFVCNALCTGGPRQCR*YRSSLP
Trigger: AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGG...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 2 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp AGTGGCTCCGGTCCCTGGACAGATGGTAGCCAGAGAGGCACTGACACTGGAAAGTGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 2 (lower is better)
Translates to: SGSGPWTDGSQRGTDTGKCTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...CTTTCCAGTGTCAGTGCCTCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TGGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGGGCGGTAGCCGCGGTTaGAGTGGCAATTGTAGGAGC +
Preference number: 2 (lower is better)
Translates to: WDAVVDDVVVLGVALSVWGGSRG*SGNCRS
Trigger: GCTCCTACAATTGCCACTGCAACCGCGGCTACCGCC...CCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR GCA 90 bp TGGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: WDAVVDDVVVLGVALSVWSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...CCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATG +
Preference number: 2 (lower is better)
Translates to: QAETQALLLRFVCNALCTLWHLL*PQAVPM
Trigger: CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAA...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CAA 90 bp CGCCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTaGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAG +
Preference number: 2 (lower is better)
Translates to: RRPAQPAPTSDVNIN*LRKPRVKRHDLIYQ
Trigger: CTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR TCA 90 bp ACCAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTAGCATTGCGCACTCGTTaGTGTCCTGGCAGTGGGTGC +
Preference number: 2 (lower is better)
Translates to: TRRKHRLFSSGLSAMHCVALRTR*CPGSGC
Trigger: GCACCCACTGCCAGGACATCAACGAGTGCGCAATGC...TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 2 (lower is better)
Translates to: QAETQALLLRFVCNALCTTGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR GCA 90 bp ACGCACTCTCCGTGGCCACAGATGTTCTGGTTCAGTCGGCACTCATCAGTCTCTGTTGGGTGGCTCTGCTaGACTGACCTCTCCTCACTC +
Preference number: 2 (lower is better)
Translates to: THSPWPQMFWFSRHSSVSVGWLC*TDLSSL
Trigger: GAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAAC...AGAGACTGATGAGTGCCGACTGAACCAGAACATCTGTGGCCACGGAGAGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGTTGAGGCAGTCACCATaGCGACACACGCCCGGCATT +
Preference number: 2 (lower is better)
Translates to: GKVTLALNGERLVGGENVLRQSP*RHTPGI
Trigger: AATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAA...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTACCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 2 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGTATCCCTTCCCAGCTaGGCAGATCTCCTTGAACGC +
Preference number: 2 (lower is better)
Translates to: QAETQALLLRFVCNALCTVSLPS*ADLLER
Trigger: GCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATAC...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CCA 90 bp GTCCTGGGTGGGAGTGAAGCCCTCATCGCAGACACACACATAGGAGCCCTGAAGATGGTGAGCGTCTGGTaGGAGGTGAGAATGTGGTAT +
Preference number: 2 (lower is better)
Translates to: VLGGSEALIADTHIGALKMVSVW*EVRMWY
Trigger: ATACCACATTCTCACCTCCCACCAGACGCTCACCAT...CTTCAGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 2 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
3UTR-3UTR CCA 90 bp CCAATACGCTGTCGCAGAACACTGTGTCATCGAAGTTCAGGTAGCACTCCTTCTCGCACAGGTGGGGCTTaGCGCATTCGTTCAGGTCCA +
Preference number: 2 (lower is better)
Translates to: PIRCRRTLCHRSSGSTPSRTGGA*RIRSGP
Trigger: TGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCG...AGAAGGAGTGCTACCTGAACTTCGATGACACAGTGTTCTGCGACAGCGTATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 2 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR TCA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACCGCCCACGTCAGACGTaGACATCAATTTGCTTCGAA +
Preference number: 2 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHRPRQT*TSICFE
Trigger: TTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCG...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR-3UTR GCA 90 bp CCAATACGCTGTCGCAGAACACTGTGTCATCGAAGTTCAGGTAGCACTCCTTCTGGTGGCCCGTCAGGGTaGAGGAAAAGGGAAAAGTCA +
Preference number: 2 (lower is better)
Translates to: PIRCRRTLCHRSSGSTPSGGPSG*RKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC...AGAAGGAGTGCTACCTGAACTTCGATGACACAGTGTTCTGCGACAGCGTATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR TCA 90 bp TCAAATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCTCACCTGGGGATGAATaGGCCACCTTCCACCCACTG +
Preference number: 2 (lower is better)
Translates to: SNLSNMLCKRSFELYPETSPGDE*ATFHPL
Trigger: CAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGA...GGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
3UTR-3UTR TCA 90 bp TCAAATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCAGAGTCACCTGGGGATaGATGAGCCACCTTCCACCC +
Preference number: 2 (lower is better)
Translates to: SNLSNMLCKRSFELYPETRVTWG*MSHLPP
Trigger: GGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCT...GGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
3UTR-3UTR TCA 90 bp GTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTAGTTCGTTGAGAAAATaGGTGAGCAGAGTCACCTGG +
Preference number: 2 (lower is better)
Translates to: VTCFANAASSSTPRPFLRSSLRK*VSRVTW
Trigger: CCAGGTGACTCTGCTCACTCATTTTCTCAACGAACT...ACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
3UTR GCA 72 bp GGCGGCGCTGGGGAACGCAGGCCCCGTGCGGGCGGCTaGGCGCGAAGCCGGCTTTGCAGACGCAGCGGAAGG +
Preference number: 3 (lower is better)
Translates to: GGAGERRPRAGG*ARSRLCRRSGR
Trigger: CCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCGTTCCCCAGCGCCGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp GCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGC +
Preference number: 3 (lower is better)
Translates to: ARGPAHMPSSPR*LQHTSRRSGAR
Trigger: GCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp GGGCACGGTCGGCATTGGGCGCCCCAGCCGCGGCCCTaGCGGCAGCAGCAGTCGTCGAAGGTGAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: GHGRHWAPQPRP*RQQQSSKVRAG
Trigger: GCCTGCCCTCACCTTCGACGACTGCTGCTGCCGCCAGGGCCGCGGCTGGGGCGCCCAATGCCGACCGTGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TCGATATCCACGCAGCGGGCGCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCGCACACGGCGCCGCCC +
Preference number: 3 (lower is better)
Translates to: SISTQRAREASS*KPPGHSHTAPP
Trigger: GGGCGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCGCTGCGTGGATATCGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp CCGGGAGGTTCTCGCACCAGCCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCACGTCGCGACAGGCCC +
Preference number: 3 (lower is better)
Translates to: PGGSRTSQASRG*PRRTRSRRDRP
Trigger: GGGCCTGTCGCGACGTGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTGGCTGGTGCGAGAACCTCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp AGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTaGAGACGCAGCGGAAGGAGCCGCTGGTGTTCACGC +
Preference number: 3 (lower is better)
Translates to: RPRAGGCARSRL*RRSGRSRWCSR
Trigger: GCGTGAACACCAGCGGCTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp CGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGCGGCGTCAGCGGCGGC +
Preference number: 3 (lower is better)
Translates to: RARGNPSVITEV*AEGGVGGVSGG
Trigger: GCCGCCGCTGACGCCGCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 72 bp CTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAG +
Preference number: 3 (lower is better)
Translates to: LGSQGAGRVCGP*RSLGPSHKSGQ
Trigger: CTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR GCA 72 bp ACTGGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGCCGCGCGTGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: TGAARDCTRQGA*RHSGSRRACSH
Trigger: GTGAGAACACGCGCGGCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTG +
Preference number: 3 (lower is better)
Translates to: SGARSISSGLRH*RCAGLYSAGGV
Trigger: CACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp GGGCTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCTCTCAATGCGGTGCAC +
Preference number: 3 (lower is better)
Translates to: GLGVRQQVLGGG*ALGVRALNAVH
Trigger: GTGCACCGCATTGAGAGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp GCACGCTCCATCTCTTCCGGGCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: ARSISSGLRHWR*AGLYSAGGVQA
Trigger: TGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp AAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: KAPGGSAGPEGP*VRATSRGRSEA
Trigger: GGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR-3UTR CAA 90 bp GGGCTCAGGCACTGGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCATGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: GLRHWRCAGLYSAGGVQACSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...TGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CAA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGAGGCCGGGGAGGGGGTaGCTGCCACACGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: HTAAWAECPESSGPGASGRPGRG*LPHGCL
Trigger: CAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCCT...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR TCA 72 bp GGGTTGCTGCCACACGGCTGCTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGGC +
Preference number: 3 (lower is better)
Translates to: GLLPHGCLGRVS*KQRPRGFWVGG
Trigger: GCCGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTGGCAGCAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR GCA 72 bp GGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTTaGTGGCCACAGAGTCGCCCTCCGGAGCCAGGGGCG +
Preference number: 3 (lower is better)
Translates to: GQRSPGRRRWRA*WPQSRPPEPGA
Trigger: CGCCCCTGGCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp CAGCGATCACCTGGACGGCGTAGATGGCGTGCTTGCTaGCCACAGAGTCGCCCTCCGGAGCCAGGGGCGGCA +
Preference number: 3 (lower is better)
Translates to: QRSPGRRRWRAC*PQSRPPEPGAA
Trigger: TGCCGCCCCTGGCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TGCGGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGGAGATCAGCTCGGGGT +
Preference number: 3 (lower is better)
Translates to: CGKEASPAGTSA*SGARDGRSARG
Trigger: ACCCCGAGCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp AGGGGGCTTGTGTCCCAGAAGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGACCCCGCGCCGCGCGGC +
Preference number: 3 (lower is better)
Translates to: RGLVSQKELLSL*DVGQWDPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACACAAGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TGGGCAGATCTCCTTGAACGCAGCGGTGCCATCTGTTaGGCAGCGCTGACACCGCGCGCCCCAGGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: WADLLERSGAIC*AALTPRAPGLA
Trigger: GGCAAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAGGAGATCTGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 72 bp GGTGGTGGAGCCTGGCTAGGGCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCAGGGTGCAGGAAAAGG +
Preference number: 3 (lower is better)
Translates to: GGGAWLGLSGSC*GLGGPSGCRKR
Trigger: CCTTTTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCCTAGCCAGGCTCCACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 72 bp GCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAGAGTCGCCCTCCGGAG +
Preference number: 3 (lower is better)
Translates to: AQEGQRSPGRRR*RACWPQSRPPE
Trigger: CTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CAA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCGGCATTGCGCACTCGTaGATGTCCTGGCAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: LERSGAICWAALTPRAPGGIAHS*MSWQWV
Trigger: CACCCACTGCCAGGACATCAACGAGTGCGCAATGCC...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CAA 90 bp GGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGAGATCAGCGCTGGGCAGATCTCCTaGAACGCAGCGGTGCCATCT +
Preference number: 3 (lower is better)
Translates to: GKSGRNQRMVGGEGREISAGQIS*NAAVPS
Trigger: AGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAGC...GCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CAA 90 bp GGGCTCAGGCACTGGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCAGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 3 (lower is better)
Translates to: GLRHWRCAGLYSAGGVQAGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...TGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CAA 90 bp CTCGTCCACATCCAAGCAACTGCGGCCGTCGGGCGCGGGCGCGTAGCCCTGGGCTTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 3 (lower is better)
Translates to: LVHIQATAAVGRGRVALGLKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...GCCCAGGGCTACGCGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGGACGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp TCAGGTGGTGGAGCCTGGCTAGGGCTCTCCGGAAGCTaGTGGGGCTTGGGTGGCCCGTCAGGGTGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: SGGGAWLGLSGS*WGLGGPSGCRK
Trigger: TTTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR GCA 72 bp GGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTaGTGCACTGACCTCTCCTCACTCACCGGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: GRAGVVVAVGWL*CTDLSSLTGES
Trigger: GGACTCACCGGTGAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 72 bp CTCGGCGTTCGAGCTCTCAATGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATGGACGCGCACATTCAC +
Preference number: 3 (lower is better)
Translates to: LGVRALNAVHLD*GLGRVMDAHIH
Trigger: GTGAATGTGCGCGTCCATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTCGAACGCCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp CGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTaGACTGACCTCTCCTCACTCACCGGTGAGTCCGTG +
Preference number: 3 (lower is better)
Translates to: RAGVVVAVGWLC*TDLSSLTGESV
Trigger: CACGGACTCACCGGTGAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp AGATCAGCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTaGCAGTTGGGTGGCTCTGCTGCACTGACCTCTCCT +
Preference number: 3 (lower is better)
Translates to: RSARGRAGQESW*QLGGSAALTSP
Trigger: AGGAGAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGCTGATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 72 bp AGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAATCCCTCAGTGATCACC +
Preference number: 3 (lower is better)
Translates to: RSLGPSHKSGQK*GRARGNPSVIT
Trigger: GGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
3UTR GCA 72 bp CTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGC +
Preference number: 3 (lower is better)
Translates to: LLCTAAGDTCGT*SGPRQCRCYRS
Trigger: GCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 72 bp GGAAAGTTGATGCAGAAGCCGCCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTCAGGTCCACGCACGAG +
Preference number: 3 (lower is better)
Translates to: GKLMQKPPSPHR*GLAHSFRSTHE
Trigger: CTCGTGCGTGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGGCGGCTTCTGCATCAACTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TTCACGCAGCGCTCGCTCTTGCACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCGTCGATATCCACGCAG +
Preference number: 3 (lower is better)
Translates to: FTQRSLLHSSPR*FSSRHSSISTQ
Trigger: CTGCGTGGATATCGACGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR-3UTR CAA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCAAGGCCGGGGAGGGGGTaGCTGCCACACGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPRPGRG*LPHGCL
Trigger: CAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCCT...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CAA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGACAGCGGTGCCATCTGTaGGGCAGCGCTGACACCGCG +
Preference number: 3 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRQRCHL*GSADTA
Trigger: CGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTG...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR TCA 72 bp CGGGGTAGCAGTTGCACTTGTAGTGACCGGGAAAGTTaGTGCAGAAGCCGCCGTCGCCGCACAGGTGGGGCT +
Preference number: 3 (lower is better)
Translates to: RGSSCTCSDRES*CRSRRRRTGGA
Trigger: AGCCCCACCTGTGCGGCGACGGCGGCTTCTGCATCAACTTTCCCGGTCACTACAAGTGCAACTGCTACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp TCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGCTGGGGACACTTGTGG +
Preference number: 3 (lower is better)
Translates to: SAPTSPRTGPGF*TPVYCSWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CCA 72 bp GTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCT +
Preference number: 3 (lower is better)
Translates to: VYCSWGHLWHLL*PQAVPMLPQQS
Trigger: AGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR TCA 72 bp CCACCTCCTCACAACCGTGCTGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACACACACATAGGAGCCCT +
Preference number: 3 (lower is better)
Translates to: PPPHNRAGPGWE*SPHRRHTHRSP
Trigger: AGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp GGGCTTGTTCTCGCATTTGCCATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGATGTCTTCGCACACAGG +
Preference number: 3 (lower is better)
Translates to: GLVLAFAIRARA*VPALVDVFAHR
Trigger: CCTGTGTGCGAAGACATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp TTCTGCACTCCTGTGTACTGCAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTA +
Preference number: 3 (lower is better)
Translates to: FCTPVYCSWGHL*HLLWPQAVPML
Trigger: TAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CAA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGTGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: QAETQALLLRFVCNALCTCSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR-3UTR CAA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCGAGTCGTGGTGGCAGTaGGGTGGCTCTGCTGCACTG +
Preference number: 3 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVESWWQ*GGSAAL
Trigger: CAGTGCAGCAGAGCCACCCAACTGCCACCACGACTC...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp ACTTGCCCTCCTTGCAAATCTCCGACCCGAACAACATaGACTCGTCGATGTCACGGTGGGCTGGGATGCCGT +
Preference number: 3 (lower is better)
Translates to: TCPPCKSPTRTT*TRRCHGGLGCR
Trigger: ACGGCATCCCAGCCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp CGTAGCCAGGCTGCGTGTTCACGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACAACATGCACTCGTCGA +
Preference number: 3 (lower is better)
Translates to: RSQAACSRTCPP*KSPTRTTCTRR
Trigger: TCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCAGCCTGGCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp ATTCCAGCAGGTTCCCGTCGTAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAGGCTGCGTGTTCACGC +
Preference number: 3 (lower is better)
Translates to: IPAGSRRSRSPA*SSTRSQAACSR
Trigger: GCGTGAACACGCAGCCTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACTACGACGGGAACCTGCTGGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp CACACTCATCAATGTCCTCGCAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGAGGCACTGACACTGGA +
Preference number: 3 (lower is better)
Translates to: HTHQCPRSGSGP*TDGSQRGTDTG
Trigger: TCCAGTGTCAGTGCCTCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGATGAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 72 bp ACTCGTCGATGTCACGGTGGGCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGT +
Preference number: 3 (lower is better)
Translates to: TRRCHGGLGCRS*RCCCPGCSPFR
Trigger: ACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCAGCCCACCGTGACATCGACGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp CAGAGAGGCACTGACACTGGAAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCACACACGTCCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: QRGTDTGKILAC*CRCHCHTRPQP
Trigger: AGGCTGGGGACGTGTGTGACAATGGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGTCAGTGCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp AGTAGCACTCGTAGCCAGGCTGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCGACCCGAACAACATGC +
Preference number: 3 (lower is better)
Translates to: SSTRSQAACSRT*PPCKSPTRTTC
Trigger: GCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCAGCCTGGCTACGAGTGCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR TCA 72 bp TCAGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGG +
Preference number: 3 (lower is better)
Translates to: SGCRKREKSLSP*MVSVWWEVRMW
Trigger: CCACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR TCA 72 bp CCTGGGGGCAAAGACATCTGTAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGCAGGCTGCAGGGAAGT +
Preference number: 3 (lower is better)
Translates to: PGGKDICRSHWY*CSHPQCRLQGS
Trigger: ACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTACAGATGTCTTTGCCCCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR GCA 72 bp GCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATCAATGTCCTCGCAGTG +
Preference number: 3 (lower is better)
Translates to: AIGIDAVTPNAG*REVTLINVLAV
Trigger: CACTGCGAGGACATTGATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CCA 72 bp ATGGTAGCCAGAGAGGCACTGACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCCATTGTCACACACGTC +
Preference number: 3 (lower is better)
Translates to: MVAREALTLERS*RVAADAIVTHV
Trigger: GACGTGTGTGACAATGGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGTCAGTGCCTCTCTGGCTACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGGGCTCTCGGGGAGCTaGCAATCGCGGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPGLSGS*QSRPEG
Trigger: GCCCTCCGGCCGCGATTGCCAGCTCCCCGAGAGCCC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGCGGTGCTGGGGATGTaGCCGGTAGCCGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPAVLGM*PVAGVA
Trigger: TGCAACCCCGGCTACCGGTCACATCCCCAGCACCGC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTGCAGACGCAGCGGAGGCCGGGGAGGGGGTTaGTGCCACACGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RRPRAGGCARSRLCRRSGGRGGG*CHTAAW
Trigger: CCAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCC...TCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GGGCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: GQARPGGQRTCRPLRAGSQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...GGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGGGGCCAGCGCACATaGCGTCCTCTCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEGGQRT*RPLRAG
Trigger: GCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCTGCAGCAGCAGAGCTaGCGGGTCAGGCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPLQQQS*RVRRVV
Trigger: GACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAGGCCGGAGCAAGTTaGGGCGGAGAGGAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPEAGAS*GGEEER
Trigger: TCGCTCCTCCTCTCCGCCTCAACTTGCTCCGGCCTC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGAGGCCGGGAGGCTTTaGGCCGGTAGCCGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEEAGRL*AGSRGS
Trigger: GCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPLRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGCCAGGGCGGCAGGCTaGCGGGTCCTGGCACTCGTC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGARAAG*RVLALV
Trigger: GACGAGTGCCAGGACCCGGCAGCCTGCCGCCCTGGC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGGGGGCCAGCGCACATaGCGTCCTCTCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGGGQRT*RPLRAG
Trigger: GCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGACTCCATAAGCCCTTaGCCCAGGGACCCGACCCCC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPDSISP*PRDPTP
Trigger: GGGGGTCGGGTCCCTGGGGCAAGGGCTTATGGAGTC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCAGCACACGTCGCGCCGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: GGQRTCRPLRAGSSTRRAAGTSA*SGARDG
Trigger: CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGC...GGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGCDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGATCTGTTGGGCAGCGCTaGCACCGCGCGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRSVGQR*HRAPQA
Trigger: GGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGA...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGGGCTCTCGGGGAGCTaGCAATCGCGGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGAGLSGS*QSRPEG
Trigger: GCCCTCCGGCCGCGATTGCCAGCTCCCCGAGAGCCC...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTTCTGTTGGGCAGCGCTaGCACCGCGCGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PPRAQEGQRSPGRRRWRASVGQR*HRAPQA
Trigger: GGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGA...AGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGAGGAGCCCGGCAGGTTaGCGCAGCGGCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRRSPAG*RSGQGG
Trigger: GCCGCCCTGGCCGCTGCGTCAACCTGCCGGGCTCCT...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRSSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTCCCACCGGCTCCTCCTaGGGGCACCTGGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAPTGSS*GHLAEA
Trigger: CGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGG...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACGGTGTTCATGCAGATaGCCCTCCCCGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPERCSCR*PSPGHR
Trigger: CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCGGGGGCCAGCGCACATaGCGTCCTCTCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGGGQRT*RPLRAG
Trigger: GCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTGGCCCTTCCCGGCTaGGGAGAGCCCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQVALPG*GEPAPQ
Trigger: CTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCAC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPLWHLL*PQAVPM
Trigger: CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAA...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPSWGHL*HLLWPQ
Trigger: CTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCT...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRAGTSA*SGARDG
Trigger: CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGSGLRH*RCAGLY
Trigger: GTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGAREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCGCTCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTGGCGCTGCGCGGAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: AAPGHAPSLPGSGTGAARSGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...CCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGAGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCGGAAGCCGGAGCCCGTaGGCGTGTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFGSRSP*ACLCCG
Trigger: GCCACAGCACAGACACGCTCACGGGCTCCGGCTTCC...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVLGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCAGCACACGTCGCGCCGCTGTGGAACTCGGCTaGGCTGTAGACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGQRTCRPLRAGSSTRRAAVELG*AVDWAG
Trigger: CCCTGCCCAGTCTACAGCTCAGCCGAGTTCCACAGC...GGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGCGTTCGAGCTCTCAATaGGGTGCACCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: RAREASSWKPPGHSHTAPRSSSQ*GAPGLR
Trigger: CCTCAGTCCAGGTGCACCGCATTGAGAGCTCGAACG...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGGGCTCTCCGGAAGCTaGTGGGGCTTGGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQGLSGS*WGLGGP
Trigger: CGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGGTTGGGTGGCTCTGCTaGACTGACCTCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: RAREASSWKPPGHSHTAPVGWLC*TDLSSL
Trigger: GAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAAC...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACGGGCCACAGGGCTCTaGCTCGCACTCGTTCACATC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPERATGL*LALVHI
Trigger: GATGTGAACGAGTGCGAGGCAGAGCCCTGTGGCCCG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTTGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGCCAGGGCGGCAGGCTaGCGGGTCCTGGCACTCGTC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRARAAG*RVLALV
Trigger: GACGAGTGCCAGGACCCGGCAGCCTGCCGCCCTGGC...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RAREASSWKPPGHSHTAPSVSVL*PFSPMS
Trigger: GCTCATCGGAGAGAACGGCCACAGCACAGACACGCT...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTCGTCCACATCCAAGCAACTGCGGCCGTCGGGCGCGGGCGCGTAGCCCTGGGCCTGCTGGGGCTTGGGTaGCCCGTCAGGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LVHIQATAAVGRGRVALGLLGLG*PVRVQE
Trigger: TTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAG...GCCCAGGGCTACGCGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGGACGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGLSGSC*GLGGPS
Trigger: TGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAG...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCGGCACGCACTCTCCGTaGCCACAGATGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GQARPGGQRTCRPLRAGSGTHSP*PQMFWF
Trigger: GAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCC...GGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVPSPHR*GLAHSF
Trigger: GAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGG...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHCDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELACDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEAVHLD*GLGRVM
Trigger: CATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAAVHLD*GLGRVM
Trigger: CATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHAVHLD*GLGRVM
Trigger: CATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGC...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAAGTGACCGGGAAAGTTaGTGCAGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPESDRES*CRSRRR
Trigger: GCGACGGCGGCTTCTGCATCAACTTTCCCGGTCACT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR TCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGAGGCCGGGAGGCTTTaGGCCGGTAGCCGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEEAGRL*AGSRGS
Trigger: GCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRSSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGACCTGGAACGCGGGGTTaGGAGGGCAGCCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRPGTRG*EGSLYS
Trigger: GGAGTAGAGGCTGCCCTCTCAACCCCGCGTTCCAGG...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGCCGGGGAGGGGGTTaGTGCCACACGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAGRGGG*CHTAAW
Trigger: CCAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGGGTGCTGGCACTGGTaGTCAGGGCTCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQGCWHW*SGLTRR
Trigger: CCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GGACTGAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLNRGGGPSRLRRARPTDRVVSG*WHWCSG
Trigger: CCCTGAGCACCAGTGCCAGCACCCACTGACCACCCG...ATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp ATCTGTCCCGGGCCTAGGGGCACCAGGAAGGCTGCGTGCTGGGCAGGAGGCCCCCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ICPGPRGTRKAACWAGGPRVVSG*WHWCSG
Trigger: CCCTGAGCACCAGTGCCAGCACCCACTGACCACCCG...GGGGCCTCCTGCCCAGCACGCAGCCTTCCTGGTGCCCCTAGGCCCGGGACAGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQSPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAETRQGA*RHSGSR
Trigger: GCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRTRQGA*RHSGSR
Trigger: GCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGALRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGGAAGGCTGCGTGCTaGGCAGGAGGCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAERKAAC*AGGPSP
Trigger: CGGGGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCAGCACACGTCGCGCCAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGQRTCRPLRAGSSTRRASWGHL*HLLWPQ
Trigger: CTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCT...GGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGCCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: RAREASSWKPPGHSHTAPPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGTATCCCTTCCCAGCTaGGCAGATCTCCTTGAACGC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPVSLPS*ADLLER
Trigger: GCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATAC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGACTGAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGAAGCTGCTGGGGCTTaGGTGGCCCGTCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLNRGGGPSRLRRARPTDEAAGA*VARQGA
Trigger: TGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTC...ATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGTGGTGGCAGTTGGGTaGCTCTGCTGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEVVAVG*LCCTDL
Trigger: GAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCAC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGACCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRPSPHR*GLAHSF
Trigger: GAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGG...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CACCTGGACGGCGTAGATGGCGTGCTTGCTGGCCACAGAGTCGCCCTCCGGAGCCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: HLDGVDGVLAGHRVALRSPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...GCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLCDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTCACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGCAGCCCCATGCCCTaGGATACTTCCAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEGSPMP*DTSKPP
Trigger: TGGCGGTTTGGAAGTATCCCAGGGCATGGGGCTGCC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACTCTGGTCAGAGCTGTaGCCTGTGGATCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPELWSEL*PVDPGC
Trigger: GCACCCAGGATCCACAGGCCACAGCTCTGACCAGAG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGCGGTGCACCTGGACTaGGGCCTCGGGCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGAVHLD*GLGRVM
Trigger: CATCACCCGCCCGAGGCCTCAGTCCAGGTGCACCGC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTTTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ERSGAICWAALTPRAPGLLGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...AAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGAGGCCGGGAGGCTTTaGGCCGGTAGCCGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGEAGRL*AGSRGS
Trigger: GCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAAGGACTCCAGGCCCCTaGCAGCCGTATCACCCCACA +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGARTPGP*QPYHPT
Trigger: TGTGGGGTGATACGGCTGTCAGGGGCCTGGAGTCCT...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCACAGGGCCCCTGTCCTaGTCAGGCCGGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLTGPLS*SGRGLS
Trigger: GCTCAGGCCCCGGCCTGAGCAGGACAGGGGCCCTGT...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGAGCTCTCAATGCGGTaGACCTGGACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGELSMR*TWTEAS
Trigger: CGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELACEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGGGCCGGGGAGGGGGTTaGTGCCACACGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSGRGGG*CHTAAW
Trigger: CCAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCC...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACCGCAGCAGTCTTCCTaGTTGGTGAGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQPQQSS*LVRPGR
Trigger: CCTCCCCGGCCTCACCAAGCAGGAAGACTGCTGCGG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGGGTGCTGGCACTGGTaGTCAGGGCTCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRGCWHW*SGLTRR
Trigger: CCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCC...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGGGGTGCTGGCACTGGTaGTCAGGGCTCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RLLGQSVLKAAAQGLLGGGCWHW*SGLTRR
Trigger: CCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCC...CCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGAGCCGCCGGTGTTCATaGAGATGCCCCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: RLLGQSVLKAAAQGLLGGSRRCS*RCPSPG
Trigger: GCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCT...CCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTGCAGACGCAGCGGAAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: RRPRAGGCARSRLCRRSGSRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...TCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGACCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: PWRWPFPAAESPPHRCIYTRQGA*RHSGSR
Trigger: GCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGT...ATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELARSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRRSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCTAGCCTCGGACTCTaGCCCACCGGAAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRPSLGL*PTGRRT
Trigger: GGTCCGCCTTCCGGTGGGGCAGAGTCCGAGGCTAGG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACCCTCACTCCTGCCATaGAGCCTGGGCCATAACAGT +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEPSLLP*SLGHNS
Trigger: ACTGTTATGGCCCAGGCTGCATGGCAGGAGTGAGGG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGAGATGGCGTGCTTGCTaGCCACAGAGTCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: GKEASPAGTSAWSGARDGRWRAC*PQSRPP
Trigger: CGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCT...CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTCCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAPGRRR*RACWPQ
Trigger: CTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGG...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCAGGAAGGCTGCGTGCTaGGCAGGAGGCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELRKAAC*AGGPSP
Trigger: CGGGGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCT...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGAGGAAGGCTGCGTGCTaGGCAGGAGGCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHRRKAAC*AGGPSP
Trigger: CGGGGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCT...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTCAGGCGGGTGGTCAGTaGGTGCTGGCACTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPRAQEGQRSPGRRRWRAQAGGQ*VLALVL
Trigger: GAGCACCAGTGCCAGCACCCACTGACCACCCGCCTG...AGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTGCAAGCGGTGCCATCTGTTaGGCAGCGCTGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: ARGRAGQESWWQLGGSAASGAIC*AALTPR
Trigger: GCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCT...TGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTGCTGGGGCTTGGGTaGCCCGTCAGGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGLLGLG*PVRVQE
Trigger: TTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAG...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGLSGSC*GLGGPS
Trigger: TGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAG...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTGTGTCCTCAGGTGGTaGAGCCTGGCTAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGCVLRW*SLARAL
Trigger: GAGAGCCCTAGCCAGGCTCCACCACCTGAGGACACA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCTCTGTGTCCTCAGGTaGTGGAGCCTGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVLCVLR*WSLARA
Trigger: AGCCCTAGCCAGGCTCCACCACCTGAGGACACAGAG...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGCAGGAACCAGCGCATaGTCGGGGGCGAGGGACGGG +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGAGTSA*SGARDG
Trigger: CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPESGSGP*TDGSQR
Trigger: TCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELASGLRH*RCAGLY
Trigger: GTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRSGLRH*RCAGLY
Trigger: GTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQSGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCTAGGAAACACCCTCTaGGAGGAAGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGLGNTL*EEGRQR
Trigger: GCGCTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAG...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELALGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCTCTGTTGGGCAGCGCTaGCACCGCGCGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGSVGQR*HRAPQA
Trigger: GGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGA...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR TCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGTCTGTTGGGCAGCGCTaGCACCGCGCGCCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLSVGQR*HRAPQA
Trigger: GGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGA...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGCGTCTGGTGGGAGGTaGGAATGTGGTATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGASGGR*ECGIPS
Trigger: GGAAGGGATACCACATTCTCACCTCCCACCAGACGC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCGACAGGCGATGCACTTaGAGCTCCCGGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVDRRCT*SSRACS
Trigger: AGAACAAGCCCGGGAGCTTCAAGTGCATCGCCTGTC...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR TCA 90 bp GAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTTGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: ERSGAICWAALTPRAPGLAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...AAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCTGTCCTCTAGCCCAGTaGCTCCATAAGCCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVCPLAQ*LHKPLP
Trigger: GGGCAAGGGCTTATGGAGTCACTGGGCTAGAGGACA...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR GCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACGTAGATGGCGTGCTTaGTGGCCACAGAGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGARRWRA*WPQSRP
Trigger: AGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGCEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCGCTCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTGGCGCTGCGCGGTGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: AAPGHAPSLPGSGTGAARCTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...CCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGAGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAACCGGTAGCCGGGGTTaGAGTGGCAGGAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRTGSRG*SGRSSQ
Trigger: CTGACTACTCCTGCCACTGCAACCCCGGCTACCGGT...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPESRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PWRWPFPAAESPPHRCIYSPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...ATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQEQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CGCAGGCCCCGTGCGGGCGGCTGCGCGCGAAGCCGGCTTTGCAGACGCAGCGGAAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRPRAGGCARSRLCRRSGSRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...TCCGCTGCGTCTGCAAAGCCGGCTTCGCGCGCAGCCGCCCGCACGGGGCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRLRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELRSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACTCACTGTCTGGCAATaGCCAGTCTCTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPELTVWQ*PVSGQS
Trigger: GCTCTGACCAGAGACTGGGCATTGCCAGACAGTGAG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp GGACTGAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLNRGGGPSRLRRARPTDFREEH*PPFMQG
Trigger: CCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAA...ATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTCAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGCAGGCGGGTGGTCAGTaGGTGCTGGCACTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: AAWAECPESSGPGASGWAQAGGQ*VLALVL
Trigger: GAGCACCAGTGCCAGCACCCACTGACCACCCGCCTG...CGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGGCGGGTCAGGCGGGTaGTCAGTGGGTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLGGSGG*SVGAGT
Trigger: AGTGCCAGCACCCACTGACCACCCGCCTGACCCGCC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGGCGGGTCAGGCGGGTaGTCAGTGGGTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGGGSGG*SVGAGT
Trigger: AGTGCCAGCACCCACTGACCACCCGCCTGACCCGCC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCTGCTGGGGCTTGGGTaGCCCGTCAGGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRLLGLG*PVRVQE
Trigger: TTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACTGCTGGGGCTTGGGTaGCCCGTCAGGGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAELLGLG*PVRVQE
Trigger: TTCCTGCACCCTGACGGGCCACCCAAGCCCCAGCAG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGAAGCTGCTGGGGCTTaGGTGGCCCGTCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEEAAGA*VARQGA
Trigger: TGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCTCAGGTGGTGGAGCCTaGCTAGGGCTCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGSGGGA*LGLSGS
Trigger: GCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGTGTGTCCTCAGGTGGTaGAGCCTGGCTAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GKEASPAGTSAWSGARDGCVLRW*SLARAL
Trigger: GAGAGCCCTAGCCAGGCTCCACCACCTGAGGACACA...CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGAAGGAGGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGGTGGTGGCAGTTGGGTaGCTCTGCTGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: GKEASPAGTSAWSGARDGVVAVG*LCCTDL
Trigger: GAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCAC...CCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCCTCCTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CGGGCGCGGGAGGCGTCGAGCTGGAAGCCGCCGGGACACTCGCACACGGCGCCGTGGCCACAGATGTTCTaGTTCAGTCGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: RAREASSWKPPGHSHTAPWPQMF*FSRHSS
Trigger: TGATGAGTGCCGACTGAACCAGAACATCTGTGGCCA...CGGCGCCGTGTGCGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGACGCACAGGTGGGGCTTaGCGCATTCGTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRRTGGA*RIRSGP
Trigger: TGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCG...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRIRARA*VPALVD
Trigger: ATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGAT...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGSSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCACTCCTTCTTGTGGTaGGGCTGCTCCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVHSFLW*GCSTSS
Trigger: TGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCAGGCTGCCGGGTCCTaGCACTCGTCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAQAAGS*HSSTSI
Trigger: GATGGACGTGGACGAGTGCCAGGACCCGGCAGCCTG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPETVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELASGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGACTGAACCGTGGCGGTaGCCCTTCCCGGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSTEPWR*PFPAAE
Trigger: CTCCGCAGCCGGGAAGGGCCACCGCCACGGTTCAGT...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
3UTR CAA 72 bp TTGATGCAGAAGCCGCCGTCGCCGCACAGGTGGGGCTaGGCGCATTCGTTCAGGTCCACGCACGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LMQKPPSPHRWG*AHSFRSTHERP
Trigger: GGGGCGCTCGTGCGTGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGGCGGCTTCTGCATCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CAA 72 bp CGGAAGGAGCCGCTGGTGTTCACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGGTTCAGCTCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: RKEPLVFTQRSL*HSSPRWFSSRH
Trigger: GTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCTTGCATTGCGCACTCGTTaGTGTCCTGGCAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ERSGAICWAALTPRAPGLALRTR*CPGSGC
Trigger: GCACCCACTGCCAGGACATCAACGAGTGCGCAATGC...AAGGCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGCTGTGGAACTCGGCTaGGCTGTAGACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRAVELG*AVDWAG
Trigger: CCCTGCCCAGTCTACAGCTCAGCCGAGTTCCACAGC...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGACCAGGAAGGCTGCGTaGTGGGCAGGAGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VALALAPGSADATAAVFLTRKAA*WAGGPS
Trigger: GGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCTGGT...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCCGCAGCAGTCTTCCTaGTTGGTGAGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSPQQSS*LVRPGR
Trigger: CCTCCCCGGCCTCACCAAGCAGGAAGACTGCTGCGG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAACACACGCCCGGCATTaGGCACTCGTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGATHARH*ALVDVL
Trigger: CAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGT...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACCGGTTTGTCTGCAATaGACTGTGTACGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGAPVCLQ*TVYGRG
Trigger: GCCCCTCCCGTACACAGTGCATTGCAGACAAACCGG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSRVVSG*WHWCSG
Trigger: CCCTGAGCACCAGTGCCAGCACCCACTGACCACCCG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp TCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGGGCTCTCCGGAAGCTaGTGGGGCTTGGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPWRHTPGIAHSLMSWQWGLSGS*WGLGGP
Trigger: CGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCC...CCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTCGGGCCACAGGGCTCTaGCTCGCACTCGTTCACATC +
Preference number: 4 (lower is better)
Translates to: EPWRWPFPAAESPPHRCIRATGL*LALVHI
Trigger: GATGTGAACGAGTGCGAGGCAGAGCCCTGTGGCCCG...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCGGGCCACAGGGCTCTaGCTCGCACTCGTTCACATC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRRATGL*LALVHI
Trigger: GATGTGAACGAGTGCGAGGCAGAGCCCTGTGGCCCG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGTPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: PWRWPFPAAESPPHRCIYLRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...ATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLLRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTTCATCACTCAGATCTaGTCCACCCTGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGFITQI*STLGPS
Trigger: TGAGGGCCCCAGGGTGGAGCAGATCTGAGTGATGAA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCGCGGAGATGCAGACTaGACAGCGGGGAGCGCAGAA +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELARGDAD*TAGSAE
Trigger: TTCTGCGCTCCCCGCTGTCCAGTCTGCATCTCCGCG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAATTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQFREEH*PPFMQG
Trigger: CCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAA...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCCTCCTGCGGGCACCTaGCAGAAGCGCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGPPAGT*QKRPVK
Trigger: CTTCACTGGGCGCTTCTGCCAGGTGCCCGCAGGAGG...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAGATGGCGTGCTTGCTaGCCACAGAGTCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRRWRAC*PQSRPP
Trigger: CGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGLWHLL*PQAVPM
Trigger: CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAA...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCAGGCGGGTGGTCAGTaGGTGCTGGCACTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELQAGGQ*VLALVL
Trigger: GAGCACCAGTGCCAGCACCCACTGACCACCCGCCTG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGAGCGGTGCCATCTGTTaGGCAGCGCTGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGSGAIC*AALTPR
Trigger: GCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCT...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELLSGSC*GLGGPS
Trigger: TGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGCTCTCCGGAAGCTGCTaGGGCTTGGGTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGLSGSC*GLGGPS
Trigger: TGACGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAG...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACGGGCAGGAGTCGTGGTaGCAGTTGGGTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHGQESW*QLGGSA
Trigger: AGCAGAGCCACCCAACTGCCACCACGACTCCTGCCC...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: AGRGASGLKAPGGSAGPETLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: EPWRWPFPAAESPPHRCIFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTCCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: PPRAQEGQRSPGRRRWRAPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...AGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGAVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCAGGCTGCCGGGTCCTaGCACTCGTCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELQAAGS*HSSTSI
Trigger: GATGGACGTGGACGAGTGCCAGGACCCGGCAGCCTG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHCDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELSGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGTGATCACCGAGGTCTaGGCCGAGGGCGGCGTCGGC +
Preference number: 4 (lower is better)
Translates to: TMATHARHCALVDVLAVGVITEV*AEGGVG
Trigger: GCCGACGCCGCCCTCGGCCCAGACCTCGGTGATCAC...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGTGGCCTGTGGATCCTaGGTGCGGAGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAVACGS*VRSGTG
Trigger: TCCAGTCCCACTCCGCACCCAGGATCCACAGGCCAC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACAGAGCTGTGGCCTGTaGATCCTGGGTGCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEQSCGL*ILGAEW
Trigger: CCACTCCGCACCCAGGATCCACAGGCCACAGCTCTG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCACCTCGCGGGGGTGTaGGTCTCTTCCCTGGAACGC +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSHLAGV*VSSLER
Trigger: GCGTTCCAGGGAAGAGACCCACACCCCCGCGAGGTG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR TCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQMLEPC*QLSRHW
Trigger: CCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACAT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGGCATTGCGCACTCGTTaGTGTCCTGGCAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRALRTR*CPGSGC
Trigger: GCACCCACTGCCAGGACATCAACGAGTGCGCAATGC...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGCTGGGCAGATCTCCTTaGACGCAGCGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: AAWAECPESSGPGASGWALGRSP*TQRCHL
Trigger: CAGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAG...CGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCACTCATCAGTCTCTGTaGCCTGAGTGGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: VGAPRVSRRREGLRALKVTHQSL*PEWERS
Trigger: AGATCGCTCCCACTCAGGTCACAGAGACTGATGAGT...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGGCGGTGCTGGGGATGTaGCCGGTAGCCGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMAVLGM*PVAGVA
Trigger: TGCAACCCCGGCTACCGGTCACATCCCCAGCACCGC...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGCTGTGGAACTCGGCTaGGCTGTAGACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLAVELG*AVDWAG
Trigger: CCCTGCCCAGTCTACAGCTCAGCCGAGTTCCACAGC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGALGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TPVYCSWGHLWHLLWPQASSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...TGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHSSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCCCACCGGCTCCTCCTaGGGGCACCTGGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHPTGSS*GHLAEA
Trigger: CGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGG...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCGTAGATGGCGTGCTTaGTGGCCACAGAGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRRRWRA*WPQSRP
Trigger: AGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLCEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACCCCAGGCAGTGCCGATaGTACCGCAGCAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHPRQCR*YRSSLP
Trigger: AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGG...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQTGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPRAQEGQRSPGRRRWRATGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...AGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCCCGGTTTGTCTGCAATaGACTGTGTACGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGPVCLQ*TVYGRG
Trigger: GCCCCTCCCGTACACAGTGCATTGCAGACAAACCGG...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGCGGTAGCCGCGGTTaGAGTGGCAATTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAGGSRG*SGNCRS
Trigger: GCTCCTACAATTGCCACTGCAACCGCGGCTACCGCC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACCTCCTCACAACCGTaGTGGTCCTGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAETSSQP*WSWVGV
Trigger: CACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGEQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELEQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGACTGAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: GLNRGGGPSRLRRARPTDACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...ATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGAGCGCTCACCTTCTaGCATATCCCCAGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAGALTF*HIPRAD
Trigger: GTCTGCCCTGGGGATATGGCAGAAGGTGAGCGCTCC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGTCAATGCGGTGCACCTaGACTGAGGCCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VALALAPGSADATAAVFLSMRCT*TEASGG
Trigger: CCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGA...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAAGTGGGTGCTGGCACTaGTGCTCAGGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKSGCWH*CSGLTR
Trigger: CCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGGGCGGGTCAGGCGGGTaGTCAGTGGGTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLGGSGG*SVGAGT
Trigger: AGTGCCAGCACCCACTGACCACCCGCCTGACCCGCC...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CTCACACACTCCGTTCCGGCAGTTGGACTCGTCCAGGCACTCGTCCACGTCCACCTGCAGCAGCAGAGCTaGCGGGTCAGGCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: LTHSVPAVGLVQALVHVHLQQQS*RVRRVV
Trigger: GACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG...GTGGACGTGGACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGTGTGTGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTTGGGAGGTGAGAATGTaGTATCCCTTCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAWEVRM*YPFPAG
Trigger: CCCAGCTGGGAAGGGATACCACATTCTCACCTCCCA...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCAGGTGGTGGAGCCTaGCTAGGGCTCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKSGGGA*LGLSGS
Trigger: GCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCTCAGGTGGTGGAGCCTaGCTAGGGCTCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLSGGGA*LGLSGS
Trigger: GCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGGGCAGGAGTCGTGGTaGCAGTTGGGTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKGQESW*QLGGSA
Trigger: AGCAGAGCCACCCAACTGCCACCACGACTCCTGCCC...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRIRARA*VPALVD
Trigger: ATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGAT...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGAGATCAGCTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: GKSGRNQRMVGGEGREISSSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...GCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACACTCCTTCTTGTGGTaGGGCTGCTCCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQHSFLW*GCSTSS
Trigger: TGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTTGAACGCAGCGGTGCCATCTGTTGGGCAGCGCTGACACCGCGCGCCCCAGGCGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: LERSGAICWAALTPRAPGAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...GCCTGGGGCGCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTGCGTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELALRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRTVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCTAGGAAACACCCTCTaGGAGGAAGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRLGNTL*EEGRQR
Trigger: GCGCTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCAACAGAGCCTCGTGTaGCTGGCACCTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAQQSLV*LAPPSL
Trigger: CAGAGAGGGAGGTGCCAGCCACACGAGGCTCTGTTG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGCAATGCCCAGTCTCTaGTCAGAGCTGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQAMPSL*SELWPV
Trigger: CACAGGCCACAGCTCTGACCAGAGACTGGGCATTGC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTTCTCACAGGGCTTGGTaGCCTCCCTCTCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSHRAW*PPSQSS
Trigger: GGAGGACTGAGAGGGAGGCCACCAAGCCCTGTGAGA...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRMLEPC*QLSRHW
Trigger: CCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACAT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGGCCGTTCTCTCCGATaGGCGTCATGTTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGGRSLR*ASCWSP
Trigger: AGGGCTCCAACATGACGCTCATCGGAGAGAACGGCC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGGAAGCCGGAGCCCGTaGGCGTGTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHGSRSP*ACLCCG
Trigger: GCCACAGCACAGACACGCTCACGGGCTCCGGCTTCC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR TCA 90 bp GCGCCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAGGAGCCAGGGTTGTTaGGGCAGTCACCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: APPCAARAHVRREHQFASRSQGC*GSHHGD
Trigger: GTCGCCATGGTGACTGCCTCAACAACCCTGGCTCCT...CGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCTGGGCAGATCTCCTTaGACGCAGCGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELLGRSP*TQRCHL
Trigger: CAGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRKSLSP*MVSVWW
Trigger: CCACCAGACGCTCACCATTCAGGGCGAGAGTGACTT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR TCA 90 bp CGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLLGQSVLKAAAQGLLGGKSLSP*MVSVWW
Trigger: CCACCAGACGCTCACCATTCAGGGCGAGAGTGACTT...CCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGCGGTGCTGGGGATGTaGCCGGTAGCCGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHAVLGM*PVAGVA
Trigger: TGCAACCCCGGCTACCGGTCACATCCCCAGCACCGC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGACCGGGAAAGTTaGTGCAGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLSDRES*CRSRRR
Trigger: GCGACGGCGGCTTCTGCATCAACTTTCCCGGTCACT...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR TCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGARSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGAGCAGCCACCAAGCTaGGCATGCTGGAACATACCC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRREQPPS*ACWNIP
Trigger: GGGTATGTTCCAGCATGCTCAGCTTGGTGGCTGCTC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACAGCCATCTCCCACCTaGGCCCTAACCCTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKQPSPT*ALTLGA
Trigger: AGCTCCTAGGGTTAGGGCTCAGGTGGGAGATGGCTG...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR TCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTACCCCAGTCACACCATaGCCTCAGGTTCCTGTACGC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRTPVTP*PQVPVR
Trigger: GCGTACAGGAACCTGAGGTCATGGTGTGACTGGGGT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGCCGCAGCAGTCTTCCTaGTTGGTGAGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLPQQSS*LVRPGR
Trigger: CCTCCCCGGCCTCACCAAGCAGGAAGACTGCTGCGG...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCCGGTTTGTCTGCAATaGACTGTGTACGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAPVCLQ*TVYGRG
Trigger: GCCCCTCCCGTACACAGTGCATTGCAGACAAACCGG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAACCGGTAGCCGGGGTTaGAGTGGCAGGAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKTGSRG*SGRSSQ
Trigger: CTGACTACTCCTGCCACTGCAACCCCGGCTACCGGT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGGCGGTAGCCGCGGTTaGAGTGGCAATTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLGGSRG*SGNCRS
Trigger: GCTCCTACAATTGCCACTGCAACCGCGGCTACCGCC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TPVYCSWGHLWHLLWPQASPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...TGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRCSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGCCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: VALALAPGSADATAAVFLPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCACCTCCTCACAACCGTaGTGGTCCTGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLTSSQP*WSWVGV
Trigger: CACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGT...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAACCTCCTCACAACCGTaGTGGTCCTGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKTSSQP*WSWVGV
Trigger: CACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTCCTGGGTGGGAGTGAAGCCCTCATCGCAGACACACACATAGGAGCCCTGAAGACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: VLGGSEALIADTHIGALKTRQGA*RHSGSR
Trigger: GCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGT...CTTCAGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCA +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPRLRHWR*AGLYSA
Trigger: TGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAG...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTTGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRACPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCATGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGACPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTTCAGTCCTCCGAGCTTaGCTGACACCCCCAGACTCT +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSVLRA*LTPPDS
Trigger: AGAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGA...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCAACTGTCCCGACACTaGCCCTTGAGACAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSQLSRH*PLRQVR
Trigger: GCGGACCTGTCTCAAGGGCCAGTGTCGGGACAGTTG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCCAACTGTCCCGACACTaGCCCTTGAGACAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELQLSRH*PLRQVR
Trigger: GCGGACCTGTCTCAAGGGCCAGTGTCGGGACAGTTG...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRSVSVL*PFSPMS
Trigger: GCTCATCGGAGAGAACGGCCACAGCACAGACACGCT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAESVSVL*PFSPMS
Trigger: GCTCATCGGAGAGAACGGCCACAGCACAGACACGCT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGTCAATGCGGTGCACCTaGACTGAGGCCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPRSMRCT*TEASGG
Trigger: CCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGA...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGLWHLL*PQAVPM
Trigger: CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAA...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CACCTGGACGGCGTAGATGGCGTGCTTGCTGGCCACAGAGTCGCCCTCCGGAGCCCCACGTACAGGCCCTaGCTTCTGCACTCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: HLDGVDGVLAGHRVALRSPTYRP*LLHSCV
Trigger: TACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGG...GCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTCACTCGTTGATGTCCTaGCAGTGGGTGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAHSLMS*QWVLLS
Trigger: GCTTAACAGCACCCACTGCCAGGACATCAACGAGTG...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTTGAGGCAGTCACCATaGCGACACACGCCCGGCATT +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRLRQSP*RHTPGI
Trigger: AATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVREGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTTCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELASMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELASSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTCACTCCTTCTTGTGGTaGGGCTGCTCCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EPWRWPFPAAESPPHRCIHSFLW*GCSTSS
Trigger: TGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCTAGGAAACACCCTCTaGGAGGAAGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLLGNTL*EEGRQR
Trigger: GCGCTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCTAGGAAACACCCTCTaGGAGGAAGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGLGNTL*EEGRQR
Trigger: GCGCTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAG...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCATTCCTCCTCACTGTCTaGCAATGCCCAGTCTCTGGT +
Preference number: 4 (lower is better)
Translates to: REGLRALKVPGSEPQVGAFLLTV*QCPVSG
Trigger: ACCAGAGACTGGGCATTGCCAGACAGTGAGGAGGAA...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
3UTR CAA 72 bp CCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATaGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGCGEPAPQMYL*YKPCEPGRPSQ
Trigger: CTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp TGCCACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTCTGGGCAGATCTCCTTaGACGCAGCGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: CHTAAWAECPESSGPGASLGRSP*TQRCHL
Trigger: CAGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAG...AGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGCGTCTGGTGGGAGGTaGGAATGTGGTATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLASGGR*ECGIPS
Trigger: GGAAGGGATACCACATTCTCACCTCCCACCAGACGC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLKSLSP*MVSVWW
Trigger: CCACCAGACGCTCACCATTCAGGGCGAGAGTGACTT...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTCAGTCTCTGTGACCTaGGTGGGAGCGATCTCTACG +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRSVSVT*VGAIST
Trigger: CGTAGAGATCGCTCCCACTCAGGTCACAGAGACTGA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGAGTGACCGGGAAAGTTaGTGCAGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: VALALAPGSADATAAVFLSDRES*CRSRRR
Trigger: GCGACGGCGGCTTCTGCATCAACTTTCCCGGTCACT...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp TCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SPWRHTPGIAHSLMSWQWGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...CCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGCTGTGGAACTCGGCTaGGCTGTAGACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGAVELG*AVDWAG
Trigger: CCCTGCCCAGTCTACAGCTCAGCCGAGTTCCACAGC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAELGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGCGTTCGAGCTCTCAATaGGGTGCACCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGRSSSQ*GAPGLR
Trigger: CCTCAGTCCAGGTGCACCGCATTGAGAGCTCGAACG...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTTCTGGCCCCAGGCAGTaGCGATGCTACCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TMATHARHCALVDVLAVGSGPRQ*RCYRSS
Trigger: ACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGA...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VALALAPGSADATAAVFLDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGGGTGGCCCGTCAGGGTaGAGGAAAAGGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRGGPSG*RKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGGGGCTCTCCGGAAGCTaGTGGGGCTTGGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGGLSGS*WGLGGP
Trigger: CGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCC...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGGGCCACAGGGCTCTaGCTCGCACTCGTTCACATC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGRATGL*LALVHI
Trigger: GATGTGAACGAGTGCGAGGCAGAGCCCTGTGGCCCG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAACGGTGTTCATGCAGATaGCCCTCCCCGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PPCAARAHVRREHQFASKRCSCR*PSPGHR
Trigger: CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCG...TTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp CCTCCCCGGGCCCAGGAGGGTCAGCGATCACCTGGACGGCGTAGATGGCGTGCTGCTTGTTCTCGCATTTaGCATCCGGGCAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PPRAQEGQRSPGRRRWRAACSRI*HPGKSL
Trigger: CAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGC...AGCACGCCATCTACGCCGTCCAGGTGATCGCTGACCCTCCTGGGCCCGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGRPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRTPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGCSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCTGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCGCCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGGGCTCGGGTCCTGGCTaGACTCATCTATGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: APPCAARAHVRREHQFASGSGPG*THLCLG
Trigger: GCCAAGACATAGATGAGTGCAGCCAGGACCCGAGCC...CGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPREQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGEQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGCGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRRTCPP*KSPTRT
Trigger: TGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCG...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp ACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGTGGCTCACCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: TQLRALPRDPSYVEILVVAHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGGTGAGC...CACCACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCTCCTGCGGGCACCTaGCAGAAGCGCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKPPAGT*QKRPVK
Trigger: CTTCACTGGGCGCTTCTGCCAGGTGCCCGCAGGAGG...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCCTCCTGCGGGCACCTaGCAGAAGCGCCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHPPAGT*QKRPVK
Trigger: CTTCACTGGGCGCTTCTGCCAGGTGCCCGCAGGAGG...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp CCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAATCAATGCGGTGCACCTaGACTGAGGCCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: PPCAARAHVRREHQFASKSMRCT*TEASGG
Trigger: CCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGA...TTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp TCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGAGTGGGTGCTGGCACTaGTGCTCAGGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SPWRHTPGIAHSLMSWQWSGCWH*CSGLTR
Trigger: CCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACT...CCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp ACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATAGGCTGCAGCAGCAGAGCTaGCGGGTCAGGCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: TVYGRGLNYGQVGRHSDRLQQQS*RVRRVV
Trigger: GACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG...CCTATCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGAGCGGTGCCATCTGTTaGGCAGCGCTGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKSGAIC*AALTPR
Trigger: GCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCT...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGGCACGCACTCTCCGTaGCCACAGATGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKGTHSP*PQMFWF
Trigger: GAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCC...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHPSPHR*GLAHSF
Trigger: GAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGG...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSSGSGP*TDGSQR
Trigger: TCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELSGSGP*TDGSQR
Trigger: TCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HTAAWAECPESSGPGASGSGSGP*TDGSQR
Trigger: TCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCGCCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGTCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: APPCAARAHVRREHQFASSMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...CGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKSMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCTCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELSMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAEHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp ACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TLVALALAPGSADATAAVFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...GACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELSSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGAGGAAGCCGGAGCCCGTaGGCGTGTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGRGSRSP*ACLCCG
Trigger: GCCACAGCACAGACACGCTCACGGGCTCCGGCTTCC...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTAGGAGCCAGGGTTGTTaGGGCAGTCACCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: TMATHARHCALVDVLAVGRSQGC*GSHHGD
Trigger: GTCGCCATGGTGACTGCCTCAACAACCCTGGCTCCT...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp GGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATTGTACTGGGCAGATCTCCTTaGACGCAGCGGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: GGGPSRLRRARPTDVFIVLGRSP*TQRCHL
Trigger: CAGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAG...TACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp ACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATCAGTCTCTGTGACCTaGGTGGGAGCGATCTCTACG +
Preference number: 4 (lower is better)
Translates to: TVAVALPGCGEPAPQMYLSVSVT*VGAIST
Trigger: CGTAGAGATCGCTCCCACTCAGGTCACAGAGACTGA...TAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTACTCATCAGTCTCTGTaGCCTGAGTGGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: EPWRWPFPAAESPPHRCITHQSL*PEWERS
Trigger: AGATCGCTCCCACTCAGGTCACAGAGACTGATGAGT...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp CCCGGCCGGCCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAAGCGGTGCTGGGGATGTaGCCGGTAGCCGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PGRPSQAISRVHNQSHNKAVLGM*PVAGVA
Trigger: TGCAACCCCGGCTACCGGTCACATCCCCAGCACCGC...TTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGGCCGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRRSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKLGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATTGTATTGTACAAACCATGTaGGCCCGGCCGGCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WRWPFPAAESPPHRCIYCIVQTM*ARPAQP
Trigger: TGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAAT...ACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGGAGCTCTCAATGCGGTaGACCTGGACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMELSMR*TWTEAS
Trigger: CGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTC...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCCCAGGCAGTGCCGATaGTACCGCAGCAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGPRQCR*YRSSLP
Trigger: AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR GCA 90 bp TGCCACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: CHTAAWAECPESSGPGASTGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...AGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp ACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTAGGTGGCCCGTCAGGGTaGAGGAAAAGGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: TVAVALPGCGEPAPQMYLGGPSG*RKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC...TAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGGCGGTAGCCGCGGTTaGAGTGGCAATTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGGGSRG*SGNCRS
Trigger: GCTCCTACAATTGCCACTGCAACCGCGGCTACCGCC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGCTTGTTCTCGCATTTaGCATCCGGGCAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRACSRI*HPGKSL
Trigger: CAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGTGCCAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: AASSSTPRPFLRGNSSGASPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...GGCACCACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGAGCAGCAGCACTCCTaGTGGGTCACGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHEQQHS*WVTLVA
Trigger: GGCCACCAACGTGACCCAGCAGGAGTGCTGCTGCTC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCCGACCCGAACAACATaGACTCGTCGATGTCACGGT +
Preference number: 4 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSPTRTT*TRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCCGACCCGAACAACATaGACTCGTCGATGTCACGGT +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLPTRTT*TRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGRTCPP*KSPTRT
Trigger: TGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCG...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLRTCPP*KSPTRT
Trigger: TGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAESRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELASRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGACAGGCCCGGGGCGGGGGTaGTGGCGCTCACCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: EQSHLGMNEPPSTHCLQTGPGRG*WRSPKQ
Trigger: TTGCTTGGGTGAGCGCCAGCACCCCCGCCCCGGGCC...TGTCTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CCA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTCAACTGTCCCGACACTaGCCCTTGAGACAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TMATHARHCALVDVLAVGQLSRH*PLRQVR
Trigger: GCGGACCTGTCTCAAGGGCCAGTGTCGGGACAGTTG...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATGGGAGGTGAGAATGTaGTATCCCTTCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKWEVRM*YPFPAG
Trigger: CCCAGCTGGGAAGGGATACCACATTCTCACCTCCCA...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCATCAGGTGGTGGAGCCTaGCTAGGGCTCTCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPVYCSWGHLWHLLWPQASGGGA*LGLSGS
Trigger: GCTTCCGGAGAGCCCTAGCCAGGCTCCACCACCTGA...TGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CTCACACACTCCGTTCCGGCAGTTGGACTCGTCCAGGCACTCGTCCACGTCCACCTCTGTGTCCTCAGGTaGTGGAGCCTGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTHSVPAVGLVQALVHVHLCVLR*WSLARA
Trigger: AGCCCTAGCCAGGCTCCACCACCTGAGGACACAGAG...GTGGACGTGGACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGTGTGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGGGCAGGAGTCGTGGTaGCAGTTGGGTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHGQESW*QLGGSA
Trigger: AGCAGAGCCACCCAACTGCCACCACGACTCCTGCCC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGIRARA*VPALVD
Trigger: ATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGAT...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAETLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRTLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAACACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: SRRREGLRALKVPGSEPQHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACTTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGTVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PEGPWVRATSRGRSEAELTVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp ACGCACTCTCCGTGGCCACAGATGTTCTGGTTCAGTCGGCACTCATCAGTCTCTCGGGAGGCGTCGAGCTaGAAGCCGCCGGGACACTCG +
Preference number: 4 (lower is better)
Translates to: THSPWPQMFWFSRHSSVSREASS*KPPGHS
Trigger: CGAGTGTCCCGGCGGCTTCCAGCTCGACGCCTCCCG...AGAGACTGATGAGTGCCGACTGAACCAGAACATCTGTGGCCACGGAGAGTGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAACTGATAGTTCCCAGCTaGAGCCCAGGGCTTATCATC +
Preference number: 4 (lower is better)
Translates to: GPWVRATSRGRSEAELAELIVPS*SPGLII
Trigger: GATGATAAGCCCTGGGCTCCAGCTGGGAACTATCAG...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
3UTR CAA 72 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTaGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAG +
Preference number: 4 (lower is better)
Translates to: TPVYCSWGHLWH*LWPQAVPMLPQ
Trigger: CTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
3UTR CAA 72 bp GCGATGCACTTGAAGCTCCCGGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTTGGGTCCCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: AMHLKLPGLFSH*PSGQELGSRHS
Trigger: CGAGTGCCGGGACCCAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAAGTGCATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp TGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGCGTCTGGTGGGAGGTaGGAATGTGGTATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CGTCSGPRQCRCYRSSLPASGGR*ECGIPS
Trigger: GGAAGGGATACCACATTCTCACCTCCCACCAGACGC...AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGAGGCCGGGAGGCTTTaGGCCGGTAGCCGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: QTQLRALPRDPSYVEILVEAGRL*AGSRGS
Trigger: GCTACCCCGGCTACCGGCTCAAAGCCTCCCGGCCTC...CACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR TCA 90 bp CCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACAGGAGCCCGGCAGGTTaGCGCAGCGGCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: PTSDVNINLLRKPRVKRHRSPAG*RSGQGG
Trigger: GCCGCCCTGGCCGCTGCGTCAACCTGCCGGGCTCCT...GTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR TCA 90 bp ACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: TPVYCSWGHLWHLLWPQAKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...TGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACAAGTCGGGGCAGAAGTaGGGCCGAGCTCGCGGAAAT +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHKSGQK*GRARGN
Trigger: ATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCCGCCACTGTTCTCCTaGGTCCCCTACTCAACCCAG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHPPLFS*VPYSTQ
Trigger: CTGGGTTGAGTAGGGGACTCAGGAGAACAGTGGCGG...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR GCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp TCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCTGCGAGGGCTTGGGGTaGGGCAGCAGGTGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPPVCLQCTVYGRGLNYGCEGLG*GSRCWE
Trigger: CTCCCAGCACCTGCTGCCGCACCCCAAGCCCTCGCA...GCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp ACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCACACACGCCCGGCATTaGGCACTCGTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: TLVALALAPGSADATAAVTHARH*ALVDVL
Trigger: CAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGT...GACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCTCCTCCGGTTTGTCTaGAATGCACTGTGTACGGGA +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLLLRFV*NALCTG
Trigger: TCCCGTACACAGTGCATTGCAGACAAACCGGAGGAG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAGGGTGCTGGCACTGGTaGTCAGGGCTCACCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVGCWHW*SGLTRR
Trigger: CCGCCTGGTGAGCCCTGAGCACCAGTGCCAGCACCC...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp TGCCACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGTGGCCCGTCAGGGTaGAGGAAAAGGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: CHTAAWAECPESSGPGASGGPSG*RKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC...AGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGGCGGTAGCCGCGGTTaGAGTGGCAATTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHGGSRG*SGNCRS
Trigger: GCTCCTACAATTGCCACTGCAACCGCGGCTACCGCC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GAACCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: EPWRWPFPAAESPPHRCIKILAC*CRCHCH
Trigger: GTGACAATGGCATCTGCAGCAACACGCCAGGATCTT...AATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: EGPWVRATSRGRSEAELAKILAC*CRCHCH
Trigger: GTGACAATGGCATCTGCAGCAACACGCCAGGATCTT...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTACGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVRSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGCAGGCTGTTCTCTTTaGCTGGAGTACCTCTCCTTA +
Preference number: 4 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRAGCSL*LEYLSL
Trigger: TAAGGAGAGGTACTCCAGGCAAAGAGAACAGCCTGC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGCACTCATCAGTCTCTaGGGGCATGGCCAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGALISL*GHGQVK
Trigger: CTTGACCTGGCCATGCCCGCAGAGACTGATGAGTGC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCCCACGTACAGGCCCTaGCTTCTGCACTCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGPTYRP*LLHSCV
Trigger: TACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCACTCGTTGATGTCCTaGCAGTGGGTGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGHSLMS*QWVLLS
Trigger: GCTTAACAGCACCCACTGCCAGGACATCAACGAGTG...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTTTGAGGCAGTCACCATaGCGACACACGCCCGGCATT +
Preference number: 4 (lower is better)
Translates to: TMATHARHCALVDVLAVGLRQSP*RHTPGI
Trigger: AATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAA...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPREGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACGGCGGGTCAGGCGGGTaGTCAGTGGGTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHGGSGG*SVGAGT
Trigger: AGTGCCAGCACCCACTGACCACCCGCCTGACCCGCC...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGATGGTGAGCGTCTGGTaGGAGGTGAGAATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRMVSVW*EVRMWY
Trigger: ATACCACATTCTCACCTCCCACCAGACGCTCACCAT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCAGAAGCTGCTGGGGCTTaGGTGGCCCGTCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPEAAGA*VARQGA
Trigger: TGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTC...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGGAAGCTGCTGGGGCTTaGGTGGCCCGTCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGEAAGA*VARQGA
Trigger: TGCACCCTGACGGGCCACCCAAGCCCCAGCAGCTTC...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTGGCCACAGATGTTCTaGTTCAGTCGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRWPQMF*FSRHSS
Trigger: TGATGAGTGCCGACTGAACCAGAACATCTGTGGCCA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKTLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CTCACACACTCCGTTCCGGCAGTTGGACTCGTCCAGGCACTCGTCCACGTCCACTCAATGTCCTCGCAGTaGCTCCGGTCCCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: LTHSVPAVGLVQALVHVHSMSSQ*LRSLDR
Trigger: TCTGTCCAGGGACCGGAGCCACTGCGAGGACATTGA...GTGGACGTGGACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGTGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGSSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: QAETQALLLRFVCNALCTSGLRH*RCAGLY
Trigger: GTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGA...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGACACCGGGGCGGGGGTGCTaGCGCTCACCCAAGCAACTG +
Preference number: 4 (lower is better)
Translates to: EQSHLGMNEPPSTHCLQTPGRGC*RSPKQL
Trigger: CAGTTGCTTGGGTGAGCGCCAGCACCCCCGCCCCGG...TGTCTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527339.1
3UTR CAA 72 bp CGGGCTTGTTCTCGCATTTGCCATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGATGTCTTCGCACACAG +
Preference number: 4 (lower is better)
Translates to: RACSRICHPGKS*GPGTRRCLRTQ
Trigger: CTGTGTGCGAAGACATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
3UTR CAA 72 bp TTCCCCAACAGCAGGGGGCTTGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTCGGGCAATGGGACCCC +
Preference number: 4 (lower is better)
Translates to: FPNSRGLVSQKE*LSLCDVGQWDP
Trigger: GGGGTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHMLEPC*QLSRHW
Trigger: CCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACAT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR TCA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GKVTLALNGERLVGGENVLGRVS*KQRPRG
Trigger: GCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAA...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGACAGGCGATGCACTTaGAGCTCCCGGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHDRRCT*SSRACS
Trigger: AGAACAAGCCCGGGAGCTTCAAGTGCATCGCCTGTC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGCGGGTGGTCAGTGGGTaGTGGCACTGGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVRVVSG*WHWCSG
Trigger: CCCTGAGCACCAGTGCCAGCACCCACTGACCACCCG...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGGGTGGCCCGTCAGGGTaGAGGAAAAGGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMGGPSG*RKREKS
Trigger: TGACTTTTCCCTTTTCCTGCACCCTGACGGGCCACC...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGTTGGGTGGCTCTGCTaGACTGACCTCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHVGWLC*TDLSSL
Trigger: GAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAAC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR GCA 90 bp ACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATAGGACCGGTAGCCGGGGTTaGAGTGGCAGGAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: TVYGRGLNYGQVGRHSDRTGSRG*SGRSSQ
Trigger: CTGACTACTCCTGCCACTGCAACCCCGGCTACCGGT...CCTATCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGSRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AGTGAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: SEQSHLGMNEPPSTHCLQQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...CTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACTGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHCSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCCAAGCAACTGCGGCCGTGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: LSHTSPASHSSTSKQLRPCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...CGGCCGCAGTTGCTTGGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPRACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGGGGGCCAGCGCACATaGCGTCCTCTCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQGGQRT*RPLRAG
Trigger: GCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCTGGCCAGTGGGCTTTaGAGGCTGTTCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGLASGL*RLFSLP
Trigger: AGGCAAAGAGAACAGCCTGCAAAGCCCACTGGCCAG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp CCGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAACCCACGTACAGGCCCTaGCTTCTGCACTCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PPCAARAHVRREHQFASKPTYRP*LLHSCV
Trigger: TACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGG...TTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGATGGTGAGCGTCTGGTaGGAGGTGAGAATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGMVSVW*EVRMWY
Trigger: ATACCACATTCTCACCTCCCACCAGACGCTCACCAT...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGACTCTGTGTCCTCAGGTaGTGGAGCCTGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRLCVLR*WSLARA
Trigger: AGCCCTAGCCAGGCTCCACCACCTGAGGACACAGAG...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCTGGCCACAGATGTTCTaGTTCAGTCGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLWPQMF*FSRHSS
Trigger: TGATGAGTGCCGACTGAACCAGAACATCTGTGGCCA...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACGGCACGCACTCTCCGTaGCCACAGATGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHGTHSP*PQMFWF
Trigger: GAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCC...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTACCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVPSPHR*GLAHSF
Trigger: GAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGG...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGGCTCTCGGGGAGCTaGCAATCGCGGCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAGLSGS*QSRPEG
Trigger: GCCCTCCGGCCGCGATTGCCAGCTCCCCGAGAGCCC...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGTGCGATGTCGGGCAATaGGACCCCGCGCCGCGCGGC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQCDVGQ*DPAPRG
Trigger: GCCGCGCGGCGCGGGGTCCCATTGCCCGACATCGCA...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGAGGCCGTTCTCTCCGATaGGCGTCATGTTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGRGRSLR*ASCWSP
Trigger: AGGGCTCCAACATGACGCTCATCGGAGAGAACGGCC...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp ACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATAGGAAGTCACTCTCGCCCTaGATGGTGAGCGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVYGRGLNYGQVGRHSDRKSLSP*MVSVWW
Trigger: CCACCAGACGCTCACCATTCAGGGCGAGAGTGACTT...CCTATCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp TGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTACTCATCAGTCTCTGTaGCCTGAGTGGGAGCGATCT +
Preference number: 4 (lower is better)
Translates to: CGTCSGPRQCRCYRSSLPTHQSL*PEWERS
Trigger: AGATCGCTCCCACTCAGGTCACAGAGACTGATGAGT...AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp TCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: SPWRHTPGIAHSLMSWQWRSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...CCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGAGGAGCCCGGCAGGTTaGCGCAGCGGCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRRSPAG*RSGQGG
Trigger: GCCGCCCTGGCCGCTGCGTCAACCTGCCGGGCTCCT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQASSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACAGGGCCCCTGTCCTaGTCAGGCCGGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTGPLS*SGRGLS
Trigger: GCTCAGGCCCCGGCCTGAGCAGGACAGGGGCCCTGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp ACCAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACCGCAGCAGTCTTCCTaGTTGGTGAGGCCGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TRRKHRLFSSGLSAMHCVPQQSS*LVRPGR
Trigger: CCTCCCCGGCCTCACCAAGCAGGAAGACTGCTGCGG...TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp AGTGGCTCCGGTCCCTGGACAGATGGTAGCCAGAGAGGCACTGACACTGGAAAGACACACGCCCGGCATTaGGCACTCGTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGSGPWTDGSQRGTDTGKTHARH*ALVDVL
Trigger: CAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGT...CTTTCCAGTGTCAGTGCCTCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GGGTTGTTGAGGCAGTCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGCTCCTCCGGTTTGTCTaGAATGCACTGTGTACGGGA +
Preference number: 4 (lower is better)
Translates to: GLLRQSPWRHTPGIAHSLLLRFV*NALCTG
Trigger: TCCCGTACACAGTGCATTGCAGACAAACCGGAGGAG...CAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAACAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAACTCGGCAGGGGGCGTaGAGGCACAGCGGTAGCCGC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQATRQGA*RHSGSR
Trigger: GCGGCTACCGCTGTGCCTGCACGCCCCCTGCCGAGT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGCCAGGGCGGCAGGCTaGCGGGTCCTGGCACTCGTC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGARAAG*RVLALV
Trigger: GACGAGTGCCAGGACCCGGCAGCCTGCCGCCCTGGC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGGGGGCCAGCGCACATaGCGTCCTCTCCGCGCTGGC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGGGQRT*RPLRAG
Trigger: GCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCCAAGCAACTGCGGCCGGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: LSHTSPASHSSTSKQLRPELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...CGGCCGCAGTTGCTTGGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCCTTTGGATCCTCACTaGTCACCAGTTTCATTTCCC +
Preference number: 4 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLPLDPH*SPVSFP
Trigger: GGGAAATGAAACTGGTGAGCAGTGAGGATCCAAAGG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCACAACTGTCCCGACACTaGCCCTTGAGACAGGTCCGC +
Preference number: 4 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPQLSRH*PLRQVR
Trigger: GCGGACCTGTCTCAAGGGCCAGTGTCGGGACAGTTG...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CCCGGCCGGCCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAAAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PGRPSQAISRVHNQSHNKSWGHL*HLLWPQ
Trigger: CTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCT...TTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGGCCGGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGAGTGGGTGCTGGCACTaGTGCTCAGGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: QAETQALLLRFVCNALCTSGCWH*CSGLTR
Trigger: CCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACT...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGGTATCCCTTCCCAGCTaGGCAGATCTCCTTGAACGC +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKVSLPS*ADLLER
Trigger: GCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATAC...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGACACCGTCGCCGCACAGGTaGGGCTTGGCGCATTCGTTC +
Preference number: 4 (lower is better)
Translates to: EQSHLGMNEPPSTHCLQTPSPHR*GLAHSF
Trigger: GAACGAATGCGCCAAGCCCCACCTGTGCGGCGACGG...TGTCTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAGCATTGCGCACTCGTTaGTGTCCTGGCAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVALRTR*CPGSGC
Trigger: GCACCCACTGCCAGGACATCAACGAGTGCGCAATGC...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp TCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCAGGAGCCAGGGTTGTTaGGGCAGTCACCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: SPPVCLQCTVYGRGLNYGRSQGC*GSHHGD
Trigger: GTCGCCATGGTGACTGCCTCAACAACCCTGGCTCCT...GCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGGCGTCTGGTGGGAGGTaGGAATGTGGTATCCCTTCC +
Preference number: 4 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGASGGR*ECGIPS
Trigger: GGAAGGGATACCACATTCTCACCTCCCACCAGACGC...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGATCAGTCTCTGTGACCTaGGTGGGAGCGATCTCTACG +
Preference number: 4 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRSVSVT*VGAIST
Trigger: CGTAGAGATCGCTCCCACTCAGGTCACAGAGACTGA...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGAGACAGGCGATGCACTTaGAGCTCCCGGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGRDRRCT*SSRACS
Trigger: AGAACAAGCCCGGGAGCTTCAAGTGCATCGCCTGTC...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGGTCTGCGGGCCCTaGAGGTCCCTGGGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGRVCGP*RSLGPS
Trigger: GCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCT...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp TGGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGCGTAGATGGCGTGCTTaGTGGCCACAGAGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: WDAVVDDVVVLGVALSVWRRWRA*WPQSRP
Trigger: AGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACG...CCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACCAGGAAGGCTGCGTaGTGGGCAGGAGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTRKAA*WAGGPS
Trigger: GGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCTGGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGAGCTCTCAATGCGGTaGACCTGGACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGELSMR*TWTEAS
Trigger: CGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTC...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCACCGGTTTGTCTGCAATaGACTGTGTACGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPPVCLQ*TVYGRG
Trigger: GCCCCTCCCGTACACAGTGCATTGCAGACAAACCGG...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCAAGCCGCCGGTGTTCATaGAGATGCCCCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: AHVRREHQFASKAKGKEASRRCS*RCPSPG
Trigger: GCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCT...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAAGCCGCCGGTGTTCATaGAGATGCCCCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQASRRCS*RCPSPG
Trigger: GCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQASPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCCACATCCAAGCAACTaGGGCCGTCGGGCGCGGGCG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGPHPSN*GRRARA
Trigger: CGCCCGCGCCCGACGGCCGCAGTTGCTTGGATGTGG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACTCCTGTGTACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: ALLCTAAGDTCGTCSGPRKILAC*CRCHCH
Trigger: GTGACAATGGCATCTGCAGCAACACGCCAGGATCTT...CCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAACCTCCTCACAACCGTaGTGGTCCTGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVTSSQP*WSWVGV
Trigger: CACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGT...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQARSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVFREEH*PPFMQG
Trigger: CCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAA...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAAGCTGGGGACACTTGTaGCACTTGCTCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVSWGHL*HLLWPQ
Trigger: CTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCT...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCACCCACGTACAGGCCCTaGCTTCTGCACTCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPPTYRP*LLHSCV
Trigger: TACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGG...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGAGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGREGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp TACTGCAGCTGGGGACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGATGGTGAGCGTCTGGTaGGAGGTGAGAATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: YCSWGHLWHLLWPQAVPMMVSVW*EVRMWY
Trigger: ATACCACATTCTCACCTCCCACCAGACGCTCACCAT...CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp ACACTTGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCATGGTGAGCGTCTGGTaGGAGGTGAGAATGTGGTAT +
Preference number: 4 (lower is better)
Translates to: TLVALALAPGSADATAAVMVSVW*EVRMWY
Trigger: ATACCACATTCTCACCTCCCACCAGACGCTCACCAT...GACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGTGTGTCCTCAGGTGGTaGAGCCTGGCTAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVCVLRW*SLARAL
Trigger: GAGAGCCCTAGCCAGGCTCCACCACCTGAGGACACA...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACGTGGTGGCAGTTGGGTaGCTCTGCTGCACTGACCTC +
Preference number: 4 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHVVAVG*LCCTDL
Trigger: GAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCAC...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp AACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: NMLCKRSFELYPETLPTWIRARA*VPALVD
Trigger: ATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGAT...CCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CCA 90 bp AGTGGCTCCGGTCCCTGGACAGATGGTAGCCAGAGAGGCACTGACACTGGAAAGCACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: SGSGPWTDGSQRGTDTGKHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...CTTTCCAGTGTCAGTGCCTCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR TCA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGG +
Preference number: 4 (lower is better)
Translates to: GKVTLALNGERLVGGENVMLEPC*QLSRHW
Trigger: CCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACAT...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR TCA 90 bp CAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGAGTGACCGGGAAAGTTaGTGCAGAAGCCGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QTQLRALPRDPSYVEILVSDRES*CRSRRR
Trigger: GCGACGGCGGCTTCTGCATCAACTTTCCCGGTCACT...CACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR TCA 90 bp AACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGGACAGGCGATGCACTTaGAGCTCCCGGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: NMLCKRSFELYPETLPTWDRRCT*SSRACS
Trigger: AGAACAAGCCCGGGAGCTTCAAGTGCATCGCCTGTC...CCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR TCA 90 bp AACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGTCACCTGGGGATGAATaGGCCACCTTCCACCCACTG +
Preference number: 4 (lower is better)
Translates to: NMLCKRSFELYPETLPTWSPGDE*ATFHPL
Trigger: CAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGA...CCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACACAGGCCCTGGCTTCTaGACTCCTGTGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHTGPGF*TPVYCS
Trigger: GCTGCAGTACACAGGAGTGCAGAAGCCAGGGCCTGT...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGGGGCTCTCCGGAAGCTaGTGGGGCTTGGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRGLSGS*WGLGGP
Trigger: CGGGCCACCCAAGCCCCAGCAGCTTCCGGAGAGCCC...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACGGTGTTCATGCAGATaGCCCTCCCCGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQARCSCR*PSPGHR
Trigger: CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHKILAC*CRCHCH
Trigger: GTGACAATGGCATCTGCAGCAACACGCCAGGATCTT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AGAATGTGGTATCCCTTCCCAGCTGGGCAGATCTCCTTGAACGCAGCGGTGCCAACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: RMWYPFPAGQISLNAAVPTPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...TGGCACCGCTGCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATACCACATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TGGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: WDAVVDDVVVLGVALSVWFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...CCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACATTTCACACCCCTTGTaGCGGGCTCAGTCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHISHPL*RAQSSP
Trigger: GGGGCTAGACTGAGCCCGGCACAAGGGGTGTGAAAT...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVSVSVL*PFSPMS
Trigger: GCTCATCGGAGAGAACGGCCACAGCACAGACACGCT...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATCAATGCGGTGCACCTaGACTGAGGCCTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQASMRCT*TEASGG
Trigger: CCCGCCCGAGGCCTCAGTCCAGGTGCACCGCATTGA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp TGTCTGCAATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: CLQCTVYGRGLNYGQVGRPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...TCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCATTGCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTATTGAGGCAGTCACCATaGCGACACACGCCCGGCATT +
Preference number: 4 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVLRQSP*RHTPGI
Trigger: AATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAA...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGCGGTGCCATCTGTTaGGCAGCGCTGACACCGCGC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSGAIC*AALTPR
Trigger: GCGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp ACCAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGCACAGGTGGGGCTTaGCGCATTCGTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TRRKHRLFSSGLSAMHCVRTGGA*RIRSGP
Trigger: TGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCG...TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CGCCCTGCGCAGCCCGCGCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: RPAQPAPTSDVNINLLRKHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...CTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCGCGGGCTGCGCAGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCCACTCCTTCTTGTGGTaGGGCTGCTCCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVHSFLW*GCSTSS
Trigger: TGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTAC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGSGLRH*RCAGLY
Trigger: GTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGA...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACAGGCTGCCGGGTCCTaGCACTCGTCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAQAAGS*HSSTSI
Trigger: GATGGACGTGGACGAGTGCCAGGACCCGGCAGCCTG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRPSSPR*LQHTSR
Trigger: GCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCAAGACTAGCAGGAGCTaGTTTCCTGGGAATCCTAAC +
Preference number: 4 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGKTSRS*FPGNPN
Trigger: GTTAGGATTCCCAGGAAACCAGCTCCTGCTAGTCTT...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR TCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAAGCCGGAGCCCGTaGGCGTGTCTGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLGSRSP*ACLCCG
Trigger: GCCACAGCACAGACACGCTCACGGGCTCCGGCTTCC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAAGCAGTCGTCGAAGGTaGGGGCAGGCCCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGSSRRR*GQARPG
Trigger: CCCTGGCCGGGCCTGCCCTCACCTTCGACGACTGCT...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGACCCACCGGCTCCTCCTaGGGGCACCTGGCAGAAGCG +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGPTGSS*GHLAEA
Trigger: CGCTTCTGCCAGGTGCCCGCAGGAGGAGCCGGTGGG...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGTGCTGGGAGGGGGCTaGGCTCTCGGCGTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWVLGGG*ALGVRA
Trigger: AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCAC...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGTGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: GKVTLALNGERLVGGENVCTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGAGCCGCCGGTGTTCATaGAGATGCCCCTCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRSRRCS*RCPSPG
Trigger: GCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGAGCCCTGGGCACAGGTaGAGCGGAAGGAGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRSPGHR*SGRSPG
Trigger: TCCCGGGCTCCTTCCGCTGCACCTGTGCCCAGGGCT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: QAETQALLLRFVCNALCTACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...CGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGAATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGCGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGRTCPP*KSPTRT
Trigger: TGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCG...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGCAGCGCTCGCTCTTaGACAGCAGCCCGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRRSARS*TAARAG
Trigger: ACCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACCCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: PTSDVNINLLRKPRVKRHPGRRR*RACWPQ
Trigger: CTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGG...GTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGCCTGGACGGCGTAGATaGCGTGCTTGCTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQPGRRR*RACWPQ
Trigger: CTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGG...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CCCGGCCGGCCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAACACTCGTTGATGTCCTaGCAGTGGGTGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: PGRPSQAISRVHNQSHNKHSLMS*QWVLLS
Trigger: GCTTAACAGCACCCACTGCCAGGACATCAACGAGTG...TTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGGCCGGCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGTGGGTGCTGGCACTaGTGCTCAGGGCTCACCAGG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSGCWH*CSGLTR
Trigger: CCTGGTGAGCCCTGAGCACCAGTGCCAGCACCCACT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGCTGCAGCAGCAGAGCTaGCGGGTCAGGCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWLQQQS*RVRRVV
Trigger: GACCACCCGCCTGACCCGCCAGCTCTGCTGCTGCAG...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGGTATCCCTTCCCAGCTaGGCAGATCTCCTTGAACGC +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGVSLPS*ADLLER
Trigger: GCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATAC...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGTATCCCTTCCCAGCTaGGCAGATCTCCTTGAACGC +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVVSLPS*ADLLER
Trigger: GCGTTCAAGGAGATCTGCCCAGCTGGGAAGGGATAC...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGTGGGAGGTGAGAATGTaGTATCCCTTCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGWEVRM*YPFPAG
Trigger: CCCAGCTGGGAAGGGATACCACATTCTCACCTCCCA...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AGGGTGCAGGAAAAGGGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: RVQEKGKVTLALNGERLVTVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...CACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCCCTTTTCCTGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACAGTCTCTGCGGGCATaGCCAGGTCAAGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAQSLRA*PGQAAE
Trigger: CTCTGCCGCTTGACCTGGCCATGCCCGCAGAGACTG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGCTGTGGAACTCGGCTaGGCTGTAGACTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGAVELG*AVDWAG
Trigger: CCCTGCCCAGTCTACAGCTCAGCCGAGTTCCACAGC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp ACCAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRRKHRLFSSGLSAMHCVLGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR GCA 90 bp AGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATACCAGGAAGGCTGCGTaGTGGGCAGGAGGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RREHQFASKAKGKEARSDTRKAA*WAGGPS
Trigger: GGAGGGGCCTCCTGCCCAGCACGCAGCCTTCCTGGT...ATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGCTCCTCCGGTTTGTCTaGAATGCACTGTGTACGGGA +
Preference number: 4 (lower is better)
Translates to: GKVTLALNGERLVGGENVLLRFV*NALCTG
Trigger: TCCCGTACACAGTGCATTGCAGACAAACCGGAGGAG...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACCGGTAGCCGGGGTTaGAGTGGCAGGAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTGSRG*SGRSSQ
Trigger: CTGACTACTCCTGCCACTGCAACCCCGGCTACCGGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp AACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGGCTTGTTCTCGCATTTaGCATCCGGGCAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NMLCKRSFELYPETLPTWACSRI*HPGKSL
Trigger: CAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGC...CCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGACAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCA +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGQASRG*PRRTRS
Trigger: TGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTG...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp ACCAGGCGGAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACCGACCCGAACAACATaGACTCGTCGATGTCACGGT +
Preference number: 4 (lower is better)
Translates to: TRRKHRLFSSGLSAMHCVPTRTT*TRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGG...TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTCCGCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGATGGCGTGCTTGCTaGCCACAGAGTCGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGRWRAC*PQSRPP
Trigger: CGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCT...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp ATCGAAGTTCAGGTAGCACTCCTTCTTGTGGTGGGGCTGCTCCACCTCCTCACACACTCGTTGATGTCCTaGCAGTGGGTGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: IEVQVALLLVVGLLHLLTHSLMS*QWVLLS
Trigger: GCTTAACAGCACCCACTGCCAGGACATCAACGAGTG...TGTGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTGCTACCTGAACTTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACTGTGTCCTCAGGTGGTaGAGCCTGGCTAGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: PTSDVNINLLRKPRVKRHCVLRW*SLARAL
Trigger: GAGAGCCCTAGCCAGGCTCCACCACCTGAGGACACA...GTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: ETQALLLRFVCNALCTGGTLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGCACAGCAGCCCGCGCTaGTTCAGCTCTCGGCACTCG +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLHSSPR*FSSRHS
Trigger: CGAGTGCCGAGAGCTGAACCAGCGCGGGCTGCTGTG...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGAGCGGAAGGAGCCGCTaGTGTTCACGCAGCGCTCGC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRSGRSR*CSRSAR
Trigger: GCGAGCGCTGCGTGAACACCAGCGGCTCCTTCCGCT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGGTGCGGAGTGGGACTaGAGCAGCCACCAAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGGAEWD*SSHQAE
Trigger: CTCAGCTTGGTGGCTGCTCCAGTCCCACTCCGCACC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGGCCGTTCTCTCCGATaGGCGTCATGTTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGGRSLR*ASCWSP
Trigger: AGGGCTCCAACATGACGCTCATCGGAGAGAACGGCC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGTCCTGGGTGGGAGTaGAGCCCTCATCGCAGACAC +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLGPGWE*SPHRRH
Trigger: GTGTCTGCGATGAGGGCTTCACTCCCACCCAGGACC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGCGGAAATCCCTCAGTaGTCACCGAGGTCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWAEIPQ*SPRSGP
Trigger: CGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGC...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGTGCCAGTTCGTTGAGAAAATaGGTGAGCAGAGTCACCTGG +
Preference number: 4 (lower is better)
Translates to: AASSSTPRPFLRGNSSGASSLRK*VSRVTW
Trigger: CCAGGTGACTCTGCTCACTCATTTTCTCAACGAACT...GGCACCACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGTCTGGCCCCAGGCAGTaGCGATGCTACCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWSGPRQ*RCYRSS
Trigger: ACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGA...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGTCTGGCCCCAGGCAGTaGCGATGCTACCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLSGPRQ*RCYRSS
Trigger: ACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGA...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACACACGCCCGGCATTaGGCACTCGTTGATGTCCTG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTHARH*ALVDVL
Trigger: CAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCAGTTGGGTGGCTCTGCTaGACTGACCTCTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: AHVRREHQFASKAKGKEAVGWLC*TDLSSL
Trigger: GAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAAC...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQACSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: PTSDVNINLLRKPRVKRHFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...GTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGGGGCCTAAACTATaGCCAGGTGGGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAEGPKL*PGGQTQ
Trigger: CTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTC...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGACAGGCGGGTGGTCAGTaGGTGCTGGCACTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGQAGGQ*VLALVL
Trigger: GAGCACCAGTGCCAGCACCCACTGACCACCCGCCTG...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCAGGCACGCACTCTCCGTaGCCACAGATGTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: AHVRREHQFASKAKGKEAGTHSP*PQMFWF
Trigger: GAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCC...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGTGGCTCCGGTCCCTaGACAGATGGTAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSGSGP*TDGSQR
Trigger: TCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GTAGGAGCCATTGGTATTGATGCAGTCACCCCCAATGCAGGCTGCAGGGAAGTCCACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: VGAIGIDAVTPNAGCREVHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...GACTTCCCTGCAGCCTGCATTGGGGGTGACTGCATCAATACCAATGGCTCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTTCTTGCAGGCCCCATaGGGAAGGCACAGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRFLQAP*GRHRLG
Trigger: CCCGAGCCTGTGCCTTCCCCATGGGGCCTGCAAGAA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGCCCTGAAGGTCCCTaGGTCCGAGCCACAAGTCGG +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGGPEGP*VRATSR
Trigger: CCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCC...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTAGGAAACACCCTCTaGGAGGAAGGCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGLGNTL*EEGRQR
Trigger: GCGCTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTCTCTCACAGGGCTTaGTGGCCTCCCTCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGLSHRA*WPPSQS
Trigger: GGACTGAGAGGGAGGCCACCAAGCCCTGTGAGAGAG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGGCCGTTCTCTCCGATaGGCGTCATGTTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWGRSLR*ASCWSP
Trigger: AGGGCTCCAACATGACGCTCATCGGAGAGAACGGCC...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGAGGAGCCAGGGTTGTTaGGGCAGTCACCATGGCGAC +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLRSQGC*GSHHGD
Trigger: GTCGCCATGGTGACTGCCTCAACAACCCTGGCTCCT...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp TCAAATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCTGTTTACAGACAGCGTaGCCCGCTCCCCGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SNLSNMLCKRSFELYPETCLQTA*PAPRLQ
Trigger: CTGAAGCCGGGGAGCGGGTCACGCTGTCTGTAAACA...GGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAGCTCTCAATGCGGTaGACCTGGACTGAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWEELSMR*TWTEAS
Trigger: CGAGGCCTCAGTCCAGGTGCACCGCATTGAGAGCTC...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCGTTCGAGCTCTCAATaGGGTGCACCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGRSSSQ*GAPGLR
Trigger: CCTCAGTCCAGGTGCACCGCATTGAGAGCTCGAACG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGACACTTGTGGCACTTaGTCTGGCCCCAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLDTCGT*SGPRQC
Trigger: GCACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQACTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQATPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGACCTCCTCACAACCGTaGTGGTCCTGGGTGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWTSSQP*WSWVGV
Trigger: CACTCCCACCCAGGACCAGCACGGTTGTGAGGAGGT...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACCGACCCGAACAACATaGACTCGTCGATGTCACGGT +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAPTRTT*TRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGCGTGTTCACGCACTTaGCCTCCTTGCAAATCTCCG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAACSRT*PPCKSP
Trigger: CGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGC...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGTTGTGGCACTTGCTCTaGCCCCAGGCAGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWELWHLL*PQAVPM
Trigger: CATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACAA...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCGCACAGGTGGGGCTTaGCGCATTCGTTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWERTGGA*RIRSGP
Trigger: TGGACCTGAACGAATGCGCCAAGCCCCACCTGTGCG...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCACTCCTTCTTGTGGTaGGGCTGCTCCACCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGHSFLW*GCSTSS
Trigger: TGAGGAGGTGGAGCAGCCCCACCACAAGAAGGAGTG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGCCTGCTGGGTCACGTTaGTGGCCAATACGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLPAGSR*WPIRCR
Trigger: GCGACAGCGTATTGGCCACCAACGTGACCCAGCAGG...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGTAGCCCTTTCCGTCTaGGCAGAGGCTGTGGAACTC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGVALSV*AEAVEL
Trigger: GAGTTCCACAGCCTCTGCCCAGACGGAAAGGGCTAC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCTCCGTTCCGGCAGTTaGACTCGTCCAGGCACTCGT +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRLRSGS*TRPGTR
Trigger: ACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACTGTCCTCATCTCTTaGGGGCTTCCCCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTVLIS*GLPQQQ
Trigger: CTGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGATCCTGGGTGCGGAGTaGGACTGGAGCAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRILGAE*DWSSHQ
Trigger: TTGGTGGCTGCTCCAGTCCCACTCCGCACCCAGGAT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTGTGGGTCTCTTCCCTaGAACGCGGGGTTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRCGSLP*NAGLRG
Trigger: CCCTCTCAACCCCGCGTTCCAGGGAAGAGACCCACA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR TCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCATTGCGCACTCGTTaGTGTCCTGGCAGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGALRTR*CPGSGC
Trigger: GCACCCACTGCCAGGACATCAACGAGTGCGCAATGC...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQARSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGLGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp AATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTAGAGTCACCTGGGGATaGATGAGCCACCTTCCACCC +
Preference number: 4 (lower is better)
Translates to: NLSNMLCKRSFELYPETLRVTWG*MSHLPP
Trigger: GGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCT...AAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGACCCR*HCHTRP
Trigger: GGGACGTGTGTGACAATGGCATCTGCAGCAACACGC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGTPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRCSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTGTCTTGGCATTTCCTaGCACCCACCAGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRCLGIS*HPPADA
Trigger: GGCATCGGCTGGTGGGTGGCAGGAAATGCCAAGACA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTTCTTGTGGTGGGGCTaGTCCACCTCCTCACAACCG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRFLWWG*STSSQP
Trigger: CGGTTGTGAGGAGGTGGAGCAGCCCCACCACAAGAA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQSRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGAATTGCTCTCGCTCTaGGATGTCGGGCAATGGGAC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGELLSL*DVGQWD
Trigger: GTCCCATTGCCCGACATCGCAGAGCGAGAGCAATTC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQACPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCACTAGTGCCAAAGCTGTaGACAGGCAGTCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQALVPKL*TGSQIQ
Trigger: CTGGATCTGACTGCCTGTGCACAGCTTTGGCACTAG...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR CCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGTTGAGGCAGTCACCATaGCGACACACGCCCGGCATT +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWLRQSP*RHTPGI
Trigger: AATGCCGGGCGTGTGTCGCCATGGTGACTGCCTCAA...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCTGGGAGGTGAGAATGTaGTATCCCTTCCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGWEVRM*YPFPAG
Trigger: CCCAGCTGGGAAGGGATACCACATTCTCACCTCCCA...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTCCTCACAACCGTGCTaGTCCTGGGTGGGAGTGAAG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRSSQPC*SWVGVK
Trigger: CTTCACTCCCACCCAGGACCAGCACGGTTGTGAGGA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR TCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGACAGGCGATGCACTTaGAGCTCCCGGGCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGDRRCT*SSRACS
Trigger: AGAACAAGCCCGGGAGCTTCAAGTGCATCGCCTGTC...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWELGCRS*RCCCPG
Trigger: CCCAGGACAACAACATCGTCAACTACGGCATCCCAG...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAACCAGGTCAGCCTCTaGCCTCACATTCCTGGATCT +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGNQVSL*PHIPGS
Trigger: AGATCCAGGAATGTGAGGTCAGAGGCTGACCTGGTT...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR TCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTTCACTCCAAGACCCTaGCCCCACTCACCTCAAACC +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRFTPRP*PHSPQT
Trigger: GGTTTGAGGTGAGTGGGGTCAGGGTCTTGGAGTGAA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTGCACTCCTGTGTACTaGAGCTGGGGACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRCTPVY*SWGHLW
Trigger: CCACAAGTGTCCCCAGCTGCAGTACACAGGAGTGCA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp TCAAATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCAGCCGGGGTAGCAGTTaGACTTGTAGTGACCGGGAA +
Preference number: 4 (lower is better)
Translates to: SNLSNMLCKRSFELYPETSRGSS*TCSDRE
Trigger: TTCCCGGTCACTACAAGTGCAACTGCTACCCCGGCT...GGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR GCA 90 bp CCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: PTSDVNINLLRKPRVKRHILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...GTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGATGCAGTCACCCCCAATaGAGGCTGCAGGGAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGCSHPQ*RLQGSH
Trigger: GTGACTTCCCTGCAGCCTGCATTGGGGGTGACTGCA...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCCGACCCGAACAACATaGACTCGTCGATGTCACGGT +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWEPTRTT*TRRCHG
Trigger: ACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGG...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCTGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGCPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTGTGTACTGCAGCTaGGGACACTTGTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRPVYCS*GHLWHL
Trigger: CAAGTGCCACAAGTGTCCCCAGCTGCAGTACACAGG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp GCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCATGGCCACAGATGTTCTaGTTCAGTCGGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: ARSDLSVSRKHPLGGRQAWPQMF*FSRHSS
Trigger: TGATGAGTGCCGACTGAACCAGAACATCTGTGGCCA...TGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGCACAGGCTCGGGTCCTaGCTGCACTCATCTATGTCT +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLHRLGS*LHSSMS
Trigger: AGACATAGATGAGTGCAGCCAGGACCCGAGCCTGTG...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CCA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCTGGGTCACGTTGGTaGCCAATACGCTGTCGCAGA +
Preference number: 4 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGAGSRW*PIRCRR
Trigger: TCTGCGACAGCGTATTGGCCACCAACGTGACCCAGC...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWRSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGAGGAGCCATTGGTATTaGTGCAGTCACCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWERSHWY*CSHPQC
Trigger: GCATTGGGGGTGACTGCATCAATACCAATGGCTCCT...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGCTTGTTCTCGCATTTaGCATCCGGGCAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLACSRI*HPGKSL
Trigger: CAAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAAGATCCTGGCGTGTTaGTGCAGATGCCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGKILAC*CRCHCH
Trigger: GTGACAATGGCATCTGCAGCAACACGCCAGGATCTT...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp CCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAATTCTATTTCACCCCCAATGCAGGCTaGAGGGAAGTCACACTCATC +
Preference number: 4 (lower is better)
Translates to: PSQAISRVHNQSHNKFYFTPNAG*REVTLI
Trigger: GATGAGTGTGACTTCCCTGCAGCCTGCATTGGGGGT...GAAATAGAATTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp AATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTACCACCCACCAGCCGATaGCCCTGGGGGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: NLLRKPRVKRHDLIYQFLPPTSR*PWGQRH
Trigger: ATGTCTTTGCCCCCAGGGGCATCGGCTGGTGGGTGG...TAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGAGTAGAAGCCCTGCTTaGAGTAGCACTCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLSRSPA*SSTRSQ
Trigger: CTGGCTACGAGTGCTACTGCAAGCAGGGCTTCTACT...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGTGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWECPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGTGTCCCAGAAGGAATTaGTCTCGCTCTGCGATGTCG +
Preference number: 4 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWCPRRN*SRSAMS
Trigger: CGACATCGCAGAGCGAGAGCAATTCCTTCTGGGACA...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp GAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGACATTAAGTAACATGCTTTaGAAACGCAGCTTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: EQSHLGMNEPPSTHCLQTLSNML*KRSFEL
Trigger: GAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAA...TGTCTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGACACTGGAAAGATCCTaGCGTGTTGCTGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWETLERS*RVAADA
Trigger: GGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGT...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR TCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCGCCCACGTCAGACGTaGACATCAATTTGCTTCGAA +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWERPRQT*TSICFE
Trigger: TTCGAAGCAAATTGATGTTCACGTCTGACGTGGGCG...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp AGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATCTCCTCCGGTTTGTCTaGAATGCACTGTGTACGGGA +
Preference number: 4 (lower is better)
Translates to: RREHQFASKAKGKEARSDLLRFV*NALCTG
Trigger: TCCCGTACACAGTGCATTGCAGACAAACCGGAGGAG...ATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR GCA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGATCCTGGCGTGTTGCTaGAGATGCCATTGTCACACA +
Preference number: 4 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRILACC*RCHCHT
Trigger: TGTGTGACAATGGCATCTGCAGCAACACGCCAGGAT...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR GCA 90 bp AATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAAGCCCTGAAGGTTCTTaGAGGCCCCATGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: NLLRKPRVKRHDLIYQFLSPEGS*RPHGEG
Trigger: GCCTTCCCCATGGGGCCTGCAAGAACCTTCAGGGCT...TAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp AATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAATCCGGGCAAGAGCTTaGGTCCCGGCACTCGTCGAT +
Preference number: 4 (lower is better)
Translates to: NLLRKPRVKRHDLIYQFLIRARA*VPALVD
Trigger: ATCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGAT...TAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CCA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCACTCATCTATGTCTTaGCATTTCCTGCCACCCACC +
Preference number: 4 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWEHSSMS*HFLPPT
Trigger: GGTGGGTGGCAGGAAATGCCAAGACATAGATGAGTG...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR GCA 90 bp AATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTACGTTCGAGCTCTCAATaGGGTGCACCTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: NLLRKPRVKRHDLIYQFLRSSSQ*GAPGLR
Trigger: CCTCAGTCCAGGTGCACCGCATTGAGAGCTCGAACG...TAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS GCA 90 bp GCGGCGGAGGCCCGGGGCGGGGGTGCTGGCGCTCACCCAAGCAACTaGGGCCGTCGGGCGCGGGCGCGTAGCCCTGGGCACAGGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AAEARGGGAGAHPSN*GRRARARSPGHRCS
Trigger: GCTGCACCTGTGCCCAGGGCTACGCGCCCGCGCCCGACGGCCGCAGTTGCTTGGGTGAGCGCCAGCACCCCCGCCCCGGGCCTCCGCCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS CCA 90 bp GCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTaGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCGGCCGGG +
Preference number: 5 (lower is better)
Translates to: AGPARGPAHMPSSPR*LQHTSRRSGARSAG
Trigger: CCCGGCCGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTCATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPHPGKS*GPGTRR
Trigger: TCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATG...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GCCGCTCCGGGGCACGCTCCATCTCTTCCGGGCTCAGGCACTGGCGCTGCGCGGACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AAPGHAPSLPGSGTGAARTQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...CCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGAGCGTGCCCCGGAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: AGRGASGLKAPGGSAGPETQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTTCCCGACACTGGCCCTaGAGACAGGTCCGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPSRHWP*RQVRLQ
Trigger: CTGCAAGCGGACCTGTCTCAAGGGCCAGTGTCGGGA...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GGGCAGGCCCGGCCAGGGGGCCAGCGCACATGCCGTCCTCTCCGCGCTGGCTCCGAGTCGTGGTGGCAGTaGGGTGGCTCTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: GQARPGGQRTCRPLRAGSESWWQ*GGSAAL
Trigger: CAGTGCAGCAGAGCCACCCAACTGCCACCACGACTC...GGAGCCAGCGCGGAGAGGACGGCATGTGCGCTGGCCCCCTGGCCGGGCCTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: VGAPRVSRRREGLRALKVTQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS GCA 90 bp GCGGTAGGAGCCCGGCAGGTTGACGCAGCGGCCAGGGCGGCAGGCTaGCGGGTCCTGGCACTCGTCCACGTCCATCTCTTCCGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: AVGARQVDAAARAAG*RVLALVHVHLFRAQ
Trigger: CTGAGCCCGGAAGAGATGGACGTGGACGAGTGCCAGGACCCGGCAGCCTGCCGCCCTGGCCGCTGCGTCAACCTGCCGGGCTCCTACCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS CCA 90 bp CCGGAAGGCGGACCGCGCACCTCGCGGGGGTGTGGGTCTCTTCCCTaGAACGCGGGGTTGAGAGGGCAGCCTCTACTCCCGGAAGGCCCC +
Preference number: 5 (lower is better)
Translates to: PEGGPRTSRGCGSLP*NAGLRGQPLLPEGP
Trigger: GGGGCCTTCCGGGAGTAGAGGCTGCCCTCTCAACCCCGCGTTCCAGGGAAGAGACCCACACCCCCGCGAGGTGCGCGGTCCGCCTTCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGGCGCAAAGACCACCTaGAAGCGCTCGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGGAKTT*KRSRAS
Trigger: GCTGGCCCGCGAGCGCTTCAAGGTGGTCTTTGCGCC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCAGCGGTGCCATCTGTaGGGCAGCGCTGACACCGCG +
Preference number: 5 (lower is better)
Translates to: VGAPRVSRRREGLRALKVQRCHL*GSADTA
Trigger: CGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTG...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTTCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPSCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS GCA 90 bp GCGCACTCGTTCACGTCTGCGGCGGAAAGACCTAGCCTCGGACTCTaGCCCACCGGAAGGCGGACCGCGCACCTCGCGGGGGTGTGGGTC +
Preference number: 5 (lower is better)
Translates to: AHSFTSAAERPSLGL*PTGRRTAHLAGVWV
Trigger: GACCCACACCCCCGCGAGGTGCGCGGTCCGCCTTCCGGTGGGGCAGAGTCCGAGGCTAGGTCTTTCCGCCGCAGACGTGAACGAGTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS-3UTR CAA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTCAGCGGTGCCATCTGTaGGGCAGCGCTGACACCGCG +
Preference number: 5 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAQRCHL*GSADTA
Trigger: CGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTG...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS GCA 90 bp GGAAGGAGCCCGGGAGGTTCTCGCACCAGCCAGGCGAGCAGGGGCTaGCCTCGGCGCACTCGTTCACGTCTGCGGCGGAAAGACCTAGCC +
Preference number: 5 (lower is better)
Translates to: GRSPGGSRTSQASRG*PRRTRSRLRRKDLA
Trigger: GGCTAGGTCTTTCCGCCGCAGACGTGAACGAGTGCGCCGAGGGCAGCCCCTGCTCGCCTGGCTGGTGCGAGAACCTCCCGGGCTCCTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS CCA 90 bp GGGTCCTGGCACTCGTCCACGTCCATCTCTTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCACAG +
Preference number: 5 (lower is better)
Translates to: GSWHSSTSISSGLRH*RCAGLYSAGGVQAQ
Trigger: CTGTGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGACGTGGACGAGTGCCAGGACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTGGACACTTGTGGCACTaGCTCTGGCCCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGGHLWH*LWPQAV
Trigger: CACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCC...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPCVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRTQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: EGPWVRATSRGRSEAELATQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS TCA 90 bp GAGATACCGAGGCTGAGGGAGAGAGGTGGCCCTGCCGGGTCACACTaGCGATGGAGGCCGGGTGGAGCCGGAGCCCAGGCCTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: EIPRLRERGGPAGSH*RWRPGGAGAQAFQL
Trigger: GAGCTGGAAGGCCTGGGCTCCGGCTCCACCCGGCCTCCATCGTCAGTGTGACCCGGCAGGGCCACCTCTCTCCCTCAGCCTCGGTATCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530866.5
CDS GCA 90 bp GCCTGCGTAGAGCGAGATACCGAGGCTGAGGGAGAGAGGTGGCCCTaGCGGGTCACACTGACGATGGAGGCCGGGTGGAGCCGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ACVERDTEAEGERWP*RVTLTMEAGWSRSP
Trigger: TGGGCTCCGGCTCCACCCGGCCTCCATCGTCAGTGTGACCCGGCAGGGCCACCTCTCTCCCTCAGCCTCGGTATCTCGCTCTACGCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530866.5
CDS-3UTR CAA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTGGCGCAAAGACCACCTaGAAGCGCTCGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRGAKTT*KRSRAS
Trigger: GCTGGCCCGCGAGCGCTTCAAGGTGGTCTTTGCGCC...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CAA 90 bp GCCCTGGGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTGCACGGCGCAAAGACCACCTaGAAGCGCTCGCGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: ALGTVSAHFPTYRPWLLHGAKTT*KRSRAS
Trigger: GCTGGCCCGCGAGCGCTTCAAGGTGGTCTTTGCGCC...GTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGAGGCCGGGGAGGGGGTaGCTGCCACACGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSRPGRG*LPHGCL
Trigger: CAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCCT...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGCAGCAGTCTTCCTGCTaGGTGAGGCCGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: AAWAECPESSGPGASGWAQQSSC*VRPGRG
Trigger: CCCCCTCCCCGGCCTCACCAAGCAGGAAGACTGCTG...CGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGATGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRCSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCAGCGGTGCCATCTGTaGGGCAGCGCTGACACCGCG +
Preference number: 5 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRQRCHL*GSADTA
Trigger: CGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS-3UTR CAA 90 bp CACCTGGACGGCGTAGATGGCGTGCTTGCTGGCCACAGAGTCGCCCTCCGGAGCCAGCGGTGCCATCTGTaGGGCAGCGCTGACACCGCG +
Preference number: 5 (lower is better)
Translates to: HLDGVDGVLAGHRVALRSQRCHL*GSADTA
Trigger: CGCGGTGTCAGCGCTGCCCAACAGATGGCACCGCTG...GCTCCGGAGGGCGACTCTGTGGCCAGCAAGCACGCCATCTACGCCGTCCAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTGCACATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: ARGRAGQESWWQLGGSAAHPGKS*GPGTRR
Trigger: TCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATG...TGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGSCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGACGCAGCGCTCGCTCTaGCACAGCAGCCCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSTQRSL*HSSPRW
Trigger: CCAGCGCGGGCTGCTGTGCAAGAGCGAGCGCTGCGT...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGCGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: EGPWVRATSRGRSEAELARAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRRAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS CCA 90 bp ACCCGAACAACATGCACTCGTCGATGTCTGCGGGGTGACAAACACTaGCCGCTCCGGTCCCGCAGCTGCAGCCCGGAGGCGTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: TRTTCTRRCLRGDKH*PLRSRSCSPEAWAG
Trigger: CCCAGCCCACGCCTCCGGGCTGCAGCTGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS-3UTR CAA 90 bp GCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTGCATGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ARGRAGQESWWQLGGSAACSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...TGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp CTTGGGGTGCGGCAGCAGGTGCTGGGAGGGGGCTGCGCTCTCGGCGTTCGAGCTGGCATTGCGCACTCGTaGATGTCCTGGCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: LGVRQQVLGGGCALGVRAGIAHS*MSWQWV
Trigger: CACCCACTGCCAGGACATCAACGAGTGCGCAATGCC...AGCTCGAACGCCGAGAGCGCAGCCCCCTCCCAGCACCTGCTGCCGCACCCCAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCTGGGCAGATCTCCTaGAACGCAGCGGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRAGQIS*NAAVPS
Trigger: AGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAGC...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GGGGCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: GAGRGASGLKAPGGSAGPKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...AGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCATCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: REGLRALKVPGSEPQVGASCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTACGCACTTGCCCTCCTaGCAAATCTCCGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGTHLPS*QISDPN
Trigger: GTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGT...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGCGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHRRAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTCCCTGGAACGCGGGGTaGAGAGGGCAGCCTCTACTC +
Preference number: 5 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRPWNAG*RGQPLL
Trigger: GAGTAGAGGCTGCCCTCTCAACCCCGCGTTCCAGGG...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS GCA 90 bp ACCCCTCCAAGCCTGAGCTCGGCCTCTGAGGTGCCGCCGGCCTCCTaGAGCCTCAGTCCTCCTGTGGCTGTCAGCACCCACCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: TPPSLSSASEVPPAS*SLSPPVAVSTHLPH
Trigger: ATGAGGAAGGTGGGTGCTGACAGCCACAGGAGGACTGAGGCTGCAGGAGGCCGGCGGCACCTCAGAGGCCGAGCTCAGGCTTGGAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CCAGTGAAGTCCGGGGGACACAGGCACTGGTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGGAGAGGGCACACCAGCGGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: PVKSGGHRHWFREEH*PPFMQGRGHTSGSR
Trigger: CCGGCTTCCGCTGGTGTGCCCTCTCCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAACCAGTGCCTGTGTCCCCCGGACTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAATCCCGACACTGGCCCTaGAGACAGGTCCGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GPWVRATSRGRSEAELAESRHWP*RQVRLQ
Trigger: CTGCAAGCGGACCTGTCTCAAGGGCCAGTGTCGGGA...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp TGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATTGTAGGCCGGGGAGGGGGTaGCTGCCACACGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: WRWPFPAAESPPHRCIYCRPGRG*LPHGCL
Trigger: CAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCCT...ACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCCGCACAGGTGGGGCTaGGCGCATTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLPHRWG*AHSFRS
Trigger: GGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCCGCACAGGTGGGGCTaGGCGCATTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LKVPGSEPQVGAEVRPSSPHRWG*AHSFRS
Trigger: GGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGG...CGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCCATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLHPGKS*GPGTRR
Trigger: TCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATG...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: GRGASGLKAPGGSAGPEGCVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...ACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: GPWVRATSRGRSEAELAETPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRTPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: REGLRALKVPGSEPQVGAPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: VGAPRVSRRREGLRALKVNCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS TCA 90 bp TCTGATGGAGCCAGTTGTTGCCCACATCCCAGACCCCTCCAAGCCTaGGCTCGGCCTCTGAGGTGCCGCCGGCCTCCTGCAGCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: SDGASCCPHPRPLQA*ARPLRCRRPPAASV
Trigger: GACTGAGGCTGCAGGAGGCCGGCGGCACCTCAGAGGCCGAGCTCAGGCTTGGAGGGGTCTGGGATGTGGGCAACAACTGGCTCCATCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CCAGTGAAGTCCGGGGGACACAGGCACTGGTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGGAGAGGGCACACCACCACGCGGAAG +
Preference number: 5 (lower is better)
Translates to: PVKSGGHRHWFREEH*PPFMQGRGHTTTRK
Trigger: CTTCCGCGTGGTGGTGTGCCCTCTCCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAACCAGTGCCTGTGTCCCCCGGACTTCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000530866.5
CDS-3UTR CAA 90 bp GGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATTGTACAGCAGTCTTCCTGCTaGGTGAGGCCGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: GGGPSRLRRARPTDVFIVQQSSC*VRPGRG
Trigger: CCCCCTCCCCGGCCTCACCAAGCAGGAAGACTGCTG...TACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp TGTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTCAGCAGTCTTCCTGCTaGGTGAGGCCGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: CGTCSGPRQCRCYRSSLPQQSSC*VRPGRG
Trigger: CCCCCTCCCCGGCCTCACCAAGCAGGAAGACTGCTG...AGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp CCGTGGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATGGACACTTGTGGCACTaGCTCTGGCCCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PWRWPFPAAESPPHRCIYGHLWH*LWPQAV
Trigger: CACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCC...ATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCTGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PEGPWVRATSRGRSEAELCSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGGCTGGGCAGATCTCCTaGAACGCAGCGGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: AAWAECPESSGPGASGWAAGQIS*NAAVPS
Trigger: AGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAGC...CGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGAGTCGTGGTGGCAGTaGGGTGGCTCTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: PEGPWVRATSRGRSEAELESWWQ*GGSAAL
Trigger: CAGTGCAGCAGAGCCACCCAACTGCCACCACGACTC...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGATTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRLKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: VGAPRVSRRREGLRALKVALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: VRPSSRKSLSDHRGLGRGTPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...CCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: VPGSEPQVGAEVRPSSRKTPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...TTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp TCCGCGCTGGCTCCAGCACACGTCGCGCCGCTCCGGGGCACGCTCCATCTCTTCGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: SALAPAHVAPLRGTLHLFVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...GAAGAGATGGAGCGTGCCCCGGAGCGGCGCGACGTGTGCTGGAGCCAGCGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTGCTGCACCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: ARGRAGQESWWQLGGSAAPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...TGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp TCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGATCTATTTCACACCCCTaGTGCCGGGCTCAGTCTAGC +
Preference number: 5 (lower is better)
Translates to: SGLKAPGGSAGPEGPWVRSISHP*CRAQSS
Trigger: GCTAGACTGAGCCCGGCACAAGGGGTGTGAAATAGA...TCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTTCTCTCTCACAGGGCTaGGTGGCCTCCCTCTCAGTC +
Preference number: 5 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRSLSQG*VASLSV
Trigger: GACTGAGAGGGAGGCCACCAAGCCCTGTGAGAGAGA...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CAA 90 bp GTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTATTCCAGAAGGGTaGATTACCCCCTCCCAAGAC +
Preference number: 5 (lower is better)
Translates to: VGAPRVSRRREGLRALKVPIPEG*ITPSQD
Trigger: GTCTTGGGAGGGGGTAATCAACCCTTCTGGAATAGG...GACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS TCA 90 bp CAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCTGCGGGGTaGCAAACACTGGCCGCTCCGGTCCCGCAGCTGCAGCCCGGAGGC +
Preference number: 5 (lower is better)
Translates to: QISDPNNMHSSMSAG*QTLAAPVPQLQPGG
Trigger: GCCTCCGGGCTGCAGCTGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS CCA 90 bp CCTAGTGCCCACCCACTGGCGACCTTCCCGGGTTTGCCAGTTGCCTaGTACCTTCTGCTGAGATCTGTCCCGGGCCTAGGGGCACCAGGA +
Preference number: 5 (lower is better)
Translates to: PSAHPLATFPGLPVA*YLLLRSVPGLGAPG
Trigger: TCCTGGTGCCCCTAGGCCCGGGACAGATCTCAGCAGAAGGTACCAGGCAACTGGCAAACCCGGGAAGGTCGCCAGTGGGTGGGCACTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTTGAGACAGGTCCGCTaGCAGATCACCGGCGCAAAG +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRLRQVR*QITGAK
Trigger: CTTTGCGCCGGTGATCTGCAAGCGGACCTGTCTCAA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp ATGCACTGTGTACGGGAGGGGCCTAAACTATGGCCAGGTGGGCAGACACAGCGAAGGCCGGGGAGGGGGTaGCTGCCACACGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: MHCVREGPKLWPGGQTQRRPGRG*LPHGCL
Trigger: CAAGCAGCCGTGTGGCAGCAACCCCCTCCCCGGCCT...TCGCTGTGTCTGCCCACCTGGCCATAGTTTAGGCCCCTCCCGTACACAGTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGHPGKS*GPGTRR
Trigger: TCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATG...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGTCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: HTAAWAECPESSGPGASGSCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGACGCACTTGCCCTCCTaGCAAATCTCCGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRTHLPS*QISDPN
Trigger: GTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGT...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAACGCACTTGCCCTCCTaGCAAATCTCCGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: GPWVRATSRGRSEAELAETHLPS*QISDPN
Trigger: GTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp AAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGCCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: KVPGSEPQVGAEVRPSSRPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...CCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS TCA 90 bp GCGGAGCCGCAGGGCGCTTACCACGGTGGGCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGTCTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: AEPQGAYHGGLGCRS*RCCCPGCSPFRLGR
Trigger: TCTGCCCAGACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCAGCCCACCGTGGTAAGCGCCCTGCGGCTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526124.1
CDS CCA 90 bp GCTGGCTCTCCTCCCTCCTCTCCTGACCCTGCTGCCCTCGTCTCCTaGTCCACTCTCCTGGCATCACCTCCTCAGCCTATACCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: AGSPPSSPDPAALVS*STLLASPPQPIPKP
Trigger: GGGCTTTGGTATAGGCTGAGGAGGTGATGCCAGGAGAGTGGACCAGGAGACGAGGGCAGCAGGGTCAGGAGAGGAGGGAGGAGAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CGGCCTCTGAGGTGCCGCCGGCCTCCTGCAGCCTCAGTCCTCCTGTaGCTGTCAGCACCCACCTTCCTCATTCCTCCTGCTCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RPLRCRRPPAASVLL*LSAPTFLIPPALFF
Trigger: GAAAAACAGAGCAGGAGGAATGAGGAAGGTGGGTGCTGACAGCCACAGGAGGACTGAGGCTGCAGGAGGCCGGCGGCACCTCAGAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp ACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTTCCCGACACTGGCCCTaGAGACAGGTCCGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: TMATHARHCALVDVLAVGSRHWP*RQVRLQ
Trigger: CTGCAAGCGGACCTGTCTCAAGGGCCAGTGTCGGGA...ACCCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp TCACCATGGCGACACACGCCCGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGGACACTTGTGGCACTaGCTCTGGCCCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SPWRHTPGIAHSLMSWQWGHLWH*LWPQAV
Trigger: CACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCC...CCACTGCCAGGACATCAACGAGTGCGCAATGCCGGGCGTGTGTCGCCATGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp CGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCACTCTTCTCCTCCGGTTaGTCTGCAATGCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: REGLRALKVPGSEPQVGALFSSG*SAMHCV
Trigger: TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAG...TGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp GAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGTTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: EGPWVRATSRGRSEAELALKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...CGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GGCAAGTCCGGCAGGAACCAGCGCATGGTCGGGGGCGAGGGACGGGAGATCAGCGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: GKSGRNQRMVGGEGREISALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...GCTGATCTCCCGTCCCTCGCCCCCGACCATGCGCTGGTTCCTGCCGGACTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: SRRREGLRALKVPGSEPQALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAATTAACAGCCCCTCCTTaGAGGGGCCTTGTCCACATT +
Preference number: 5 (lower is better)
Translates to: SRRREGLRALKVPGSEPQLTAPP*RGLVHI
Trigger: AATGTGGACAAGGCCCCTCAAAGGAGGGGCTGTTAA...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS TCA 90 bp TCTCACAGGGCTTGGTGGCCTCCCTCTCAGTCCTCCGAGCTTGCCTaGCACCCCCAGACTCTGATAGTTCCCAGCTGGAGCCCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SHRAWWPPSQSSELA*HPQTLIVPSWSPGL
Trigger: AAGCCCTGGGCTCCAGCTGGGAACTATCAGAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGAGAGGGAGGCCACCAAGCCCTGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS GCA 90 bp TCTCTCTCACAGGGCTTGGTGGCCTCCCTCTCAGTCCTCCGAGCTTaGCTGACACCCCCAGACTCTGATAGTTCCCAGCTGGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SLSQGLVASLSVLRA*LTPPDSDSSQLEPR
Trigger: CCTGGGCTCCAGCTGGGAACTATCAGAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGAGAGGGAGGCCACCAAGCCCTGTGAGAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS GCA 90 bp CTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCTaGGGGGTGACAAACACTGGCCGCTCCGGTCCCGCAGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLANLRPEQHALVDV*GVTNTGRSGPAAAA
Trigger: GGCTGCAGCTGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS GCA 90 bp TCCGTGGCCACAGATGTTCTGGTTCAGTCGGCACTCATCAGTCTCTaGGGGCATGGCCAGGTCAAGCGGCAGAGCAGGGAGCGCTCACCT +
Preference number: 5 (lower is better)
Translates to: SVATDVLVQSALISL*GHGQVKRQSRERSP
Trigger: AGGTGAGCGCTCCCTGCTCTGCCGCTTGACCTGGCCATGCCCGCAGAGACTGATGAGTGCCGACTGAACCAGAACATCTGTGGCCACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS GCA 90 bp CGCGCGCGTGGGCTTAGGGCTGCAGCCCGCCGCCTATTTCCCAACTaGCAGGGGGCGCCATTTCCCACATTTGGCTTCCAGATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: RARGLRAAARRLFPN*QGAPFPTFGFQMKK
Trigger: TTTCTTCATCTGGAAGCCAAATGTGGGAAATGGCGCCCCCTGGCAGTTGGGAAATAGGCGGCGGGCTGCAGCCCTAAGCCCACGCGCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530990.1
CDS-3UTR CAA 90 bp GGCGGTGGCCCTTCCCGGCTGCGGAGAGCCCGCCCCACAGATGTATTTATTGTAGGCATTGCGCACTCGTaGATGTCCTGGCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GGGPSRLRRARPTDVFIVGIAHS*MSWQWV
Trigger: CACCCACTGCCAGGACATCAACGAGTGCGCAATGCC...TACAATAAATACATCTGTGGGGCGGGCTCTCCGCAGCCGGGAAGGGCCACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp GGCAATTGTAGGAGCCGCCGGTGTTCATGCAGATGCCCCTCCCCGGGCCACAGGTTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: GNCRSRRCSCRCPSPGHRLKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...CCTGTGGCCCGGGGAGGGGCATCTGCATGAACACCGGCGGCTCCTACAATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp TCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SRRREGLRALKVPGSEPQKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...TTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAGACCCTCCCGGCGCCTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCTCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGSCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: PEGPWVRATSRGRSEAELVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: PEGPWVRATSRGRSEAELNCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...GAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCCGGTAGGGGCGCCTCGGGTCTCAAGGCGCCGGGAGGGTCTGCGGGCCCTGAACCACAGATGTATTTATaGTACAAACCATGTGAGCCC +
Preference number: 5 (lower is better)
Translates to: AGRGASGLKAPGGSAGPEPQMYL*YKPCEP
Trigger: GGGCTCACATGGTTTGTACAATAAATACATCTGTGG...TTCAGGGCCCGCAGACCCTCCCGGCGCCTTGAGACCCGAGGCGCCCCTACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp CTGCGGGCCCTGAAGGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGTGCAGGCTGTTCTCTTaGCCTGGAGTACCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: LRALKVPGSEPQVGAEVRCRLFS*PGVPLL
Trigger: AAGGAGAGGTACTCCAGGCAAAGAGAACAGCCTGCA...CCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACCTTCAGGGCCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS TCA 90 bp GTGCTGTGGCCGTTCTCTCCGATGAGCGTCATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGGCCCTTGAGACAGGTCCGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VLWPFSPMSVMLEPC*QLSRHWPLRQVRLQ
Trigger: CTGCAAGCGGACCTGTCTCAAGGGCCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACATGACGCTCATCGGAGAGAACGGCCACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000526825.5
ENST00000526927.5
ENST00000528516.5
CDS CCA 90 bp CCAGTCTCTGGTCAGAGCTGTGGCCTGTGGATCCTGGGTGCGGAGTaGGACTGGAGCAGCCACCAAGCTGAGCATGCTGGAACATACCCA +
Preference number: 5 (lower is better)
Translates to: PVSGQSCGLWILGAE*DWSSHQAEHAGTYP
Trigger: TGGGTATGTTCCAGCATGCTCAGCTTGGTGGCTGCTCCAGTCCCACTCCGCACCCAGGATCCACAGGCCACAGCTCTGACCAGAGACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS-3UTR CAA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACGGAGGCCGGAGCAAGTaGAGGCGGAGAGGAGGAGCG +
Preference number: 5 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHGGRSK*RRRGGA
Trigger: CGCTCCTCCTCTCCGCCTCAACTTGCTCCGGCCTCC...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp CTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGCCCGCACAGGTGGGGCTaGGCGCATTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LLANLRPEQHALVDVTVGPHRWG*AHSFRS
Trigger: GGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGG...GCCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GGTCCCTGGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: GPWVRATSRGRSEAELAEKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...TTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCCAGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCCGAGGGCGGCGTAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: PSSRKSLSDHRGLGRGRRKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...ACGCCGCCCTCGGCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GGGTCCGAGCCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: GSEPQVGAEVRPSSRKSLALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...GAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGGCTCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CTCACACACTCCGTTCCGGCAGTTGGACTCGTCCAGGCACTCGTCCACGTCCACACGCACTTGCCCTCCTaGCAAATCTCCGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: LTHSVPAVGLVQALVHVHTHLPS*QISDPN
Trigger: GTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGT...GTGGACGTGGACGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGTGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCAGCCTCTCCCCTCCTTaGGATCCTCACTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGSLSPP*DPHCSP
Trigger: TGGTGAGCAGTGAGGATCCAAAGGAGGGGAGAGGCT...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS TCA 90 bp AAGGAACTTGACCCTCCCCCGGGACACACTTTCCTGAGGCCTCTCTaGTGGAGCCAGTTGTTGCCCACATCCCAGACCCCTCCAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KELDPPPGHTFLRPL*WSQLLPTSQTPPSL
Trigger: CAGGCTTGGAGGGGTCTGGGATGTGGGCAACAACTGGCTCCATCAGAGAGGCCTCAGGAAAGTGTGTCCCGGGGGAGGGTCAAGTTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 90 bp CGCAGCCTGCCCCTGAACTGTCAGTGTCCACAAGGCTCTGCTAGATaGTCTGCTTACCCAACCCACCTTGGGTTGGCTAAGCAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: RSLPLNCQCPQGSAR*SAYPTHLGLAKQAH
Trigger: GTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTTGTGGACACTGACAGTTCAGGGGCAGGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 90 bp TCCCCCTCACTCCTGCCATGCAGCCTGGGCCATAACAGTGAACTCTaGTCTGCCCCAAACTCACCTGGCCAGTGGGCTTTGCAGGCTGTT +
Preference number: 5 (lower is better)
Translates to: SPSLLPCSLGHNSEL*SAPNSPGQWALQAV
Trigger: AACAGCCTGCAAAGCCCACTGGCCAGGTGAGTTTGGGGCAGAGCAGAGTTCACTGTTATGGCCCAGGCTGCATGGCAGGAGTGAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS CCA 90 bp CCTCCTCTCCTGACCCTGCTGCCCTCGTCTCCTGGTCCACTCTCCTaGCATCACCTCCTCAGCCTATACCAAAGCCCCACTTTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: PPLLTLLPSSPGPLS*HHLLSLYQSPTLEE
Trigger: CTCTTCCAAAGTGGGGCTTTGGTATAGGCTGAGGAGGTGATGCCAGGAGAGTGGACCAGGAGACGAGGGCAGCAGGGTCAGGAGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp CACACGGCTGCTTGGGCAGAGTGTCCTGAAAGCAGCGGCCCAGGGGCTTCTGGGCTCTTCTCCTCCGGTTaGTCTGCAATGCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: HTAAWAECPESSGPGASGLFSSG*SAMHCV
Trigger: TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAG...CCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCCAACAGCAGGGGGCTaGTGTCCCAGAAGGAATTGC +
Preference number: 5 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHPTAGG*CPRRNC
Trigger: GCAATTCCTTCTGGGACACAAGCCCCCTGCTGTTGG...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGNCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS GCA 90 bp TGTTCACGCACTTGCCCTCCTTGCAAATCTCCGACCCGAACAACATaGACTCGTCGATGTCTGCGGGGTGACAAACACTGGCCGCTCCGG +
Preference number: 5 (lower is better)
Translates to: CSRTCPPCKSPTRTT*TRRCLRGDKHWPLR
Trigger: CCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS CCA 90 bp CACAAGGCTCTGCTAGATGCTCTGCTTACCCAACCCACCTTGGGTTaGCTAAGCAGGCCCACCCAAGACTCCATAGCTCCCCCGGTCCAT +
Preference number: 5 (lower is better)
Translates to: HKALLDALLTQPTLG*LSRPTQDSIAPPVH
Trigger: ATGGACCGGGGGAGCTATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CCGCCGCCTATTTCCCAACTGCCAGGGGGCGCCATTTCCCACATTTaGCTTCCAGATGAAGAAACTGAAGATCTGGGAAGGGGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPPISQLPGGAISHI*LPDEETEDLGRGLP
Trigger: GGGCAGGCCCCTTCCCAGATCTTCAGTTTCTTCATCTGGAAGCCAAATGTGGGAAATGGCGCCCCCTGGCAGTTGGGAAATAGGCGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530990.1
CDS-3UTR CAA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTATCCCGACACTGGCCCTaGAGACAGGTCCGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVSRHWP*RQVRLQ
Trigger: CTGCAAGCGGACCTGTCTCAAGGGCCAGTGTCGGGA...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGTGCAGCTGGGGACACTaGTGGCACTTGCTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: ETQALLLRFVCNALCTGGCSWGH*WHLLWP
Trigger: GGGCCAGAGCAAGTGCCACAAGTGTCCCCAGCTGCA...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp CCTCCTTGCAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCACGGTGGGGGCATTGCGCACTCGTaGATGTCCTGGCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: PPCKSPTRTTCTRRCHGGGIAHS*MSWQWV
Trigger: CACCCACTGCCAGGACATCAACGAGTGCGCAATGCC...CCCACCGTGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GTGGCACTTGCTCTGGCCCCAGGCAGTGCCGATGCTACCGCAGCAGTCTTCCTGCTCTTCTCCTCCGGTTaGTCTGCAATGCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: VALALAPGSADATAAVFLLFSSG*SAMHCV
Trigger: TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAG...CAGGAAGACTGCTGCGGTAGCATCGGCACTGCCTGGGGCCAGAGCAAGTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp GAAACACAGGCTCTTCTCCTCCGGTTTGTCTGCAATGCACTGTGTACGGGAGGGACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: ETQALLLRFVCNALCTGGTPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...CCCTCCCGTACACAGTGCATTGCAGACAAACCGGAGGAGAAGAGCCTGTGTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp CCACAAGTCGGGGCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: PQVGAEVRPSSRKSLSDHNCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...GTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGCCCCGACTTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS TCA 90 bp ATCCTGGGAGTTTCGAACATCCGCGTGGACAACCAGGTCAGCCTCTaGCCTCACATTCCTGGATCTCTCGGCTTCCGTGACCTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: ILGVSNIRVDNQVSL*PHIPGSLGFRDLPL
Trigger: GAGGGGAAGGTCACGGAAGCCGAGAGATCCAGGAATGTGAGGTCAGAGGCTGACCTGGTTGTCCACGCGGATGTTCGAAACTCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS TCA 90 bp TACTACTGTTTTCTCACTTCTGCGCATGGCCTGGAGCACCAGAGCTaGGGCCAGCAGCACTCAGAAGCACAGGCCTCACCCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: YYCFLTSAHGLEHQS*GQQHSEAQASPCFW
Trigger: CCAGAAGCAGGGTGAGGCCTGTGCTTCTGAGTGCTGCTGGCCTCAGCTCTGGTGCTCCAGGCCATGCGCAGAAGTGAGAAAACAGTAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 90 bp AGTAGCACTCGTAGCCAGGCTGCGTGTTCACGCACTTGCCCTCCTTaGAAATCTCCGACCCGAACAACATGCACTCGTCGATGTCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSTRSQAACSRTCPP*KSPTRTTCTRRCLR
Trigger: CCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCAGCCTGGCTACGAGTGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS-3UTR CAA 90 bp CGGCATTGCGCACTCGTTGATGTCCTGGCAGTGGGTGCTGTTAAGCCTCTTGTAGCTGGGCAGATCTCCTaGAACGCAGCGGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: RHCALVDVLAVGAVKPLVAGQIS*NAAVPS
Trigger: AGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAGC...TACAAGAGGCTTAACAGCACCCACTGCCAGGACATCAACGAGTGCGCAATGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526825.5
ENST00000528516.5
CDS-3UTR CAA 90 bp GTCCTGGGTGGGAGTGAAGCCCTCATCGCAGACACACACATAGGAGCCCTGAAGAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: VLGGSEALIADTHIGALKNCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...CTTCAGGGCTCCTATGTGTGTGTCTGCGATGAGGGCTTCACTCCCACCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AHVRREHQFASKAKGKEARAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS TCA 90 bp GGCAGCCCCATGCCCTGGGATACTTCCAAACCGCCACTGTTCTCCTaGGTCCCCTACTCAACCCAGGCCCTTCACTGTGTATTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: GSPMPWDTSKPPLFS*VPYSTQALHCVLRE
Trigger: TTCTCTCAATACACAGTGAAGGGCCTGGGTTGAGTAGGGGACTCAGGAGAACAGTGGCGGTTTGGAAGTATCCCAGGGCATGGGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 90 bp CAGAGAGGCACTGACACTGGAAAGATCCTGGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCTG +
Preference number: 5 (lower is better)
Translates to: QRGTDTGKILACCCR*HCHTRPQPHTRPHL
Trigger: CAGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAATGGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGTCAGTGCCTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp CCCGGCCGGCCCAGCCAGGCCATCTCACGTGTACATAATCAGAGCCACAATAAAGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: PGRPSQAISRVHNQSHNKGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...TTTATTGTGGCTCTGATTATGTACACGTGAGATGGCCTGGCTGGGCCGGCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS GCA 90 bp TGGATGGATGGATGGAGAAAGGCCACAGTGTGTCTAGGGAATTACTaGTCCCTGCCACATCCCTCAGGAACCCTCAGCCAGTCCCCCATA +
Preference number: 5 (lower is better)
Translates to: WMDGWRKATVCLGNY*SLPHPSGTLSQSPI
Trigger: TATGGGGGACTGGCTGAGGGTTCCTGAGGGATGTGGCAGGGAGCAGTAATTCCCTAGACACACTGTGGCCTTTCTCCATCCATCCATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 90 bp CAGAGAGGCACTGACACTGGAAAGATCCTGGCGTGTTGCTGCAGATaGCATTGTCACACACGTCCCCAGCCTCACACTCGTCCACATCTT +
Preference number: 5 (lower is better)
Translates to: QRGTDTGKILACCCR*HCHTRPQPHTRPHL
Trigger: AAGATGTGGACGAGTGTGAGGCTGGGGACGTGTGTGACAATGGCATCTGCAGCAACACGCCAGGATCTTTCCAGTGTCAGTGCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS GCA 90 bp ACAGTGAACTCTGCTCTGCCCCAAACTCACCTGGCCAGTGGGCTTTaGAGGCTGTTCTCTTTGCCTGGAGTACCTCTCCTTAGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: TVNSALPQTHLASGL*RLFSLPGVPLLRLP
Trigger: AGGAAGCCTAAGGAGAGGTACTCCAGGCAAAGAGAACAGCCTGCAAAGCCCACTGGCCAGGTGAGTTTGGGGCAGAGCAGAGTTCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS CCA 90 bp CAGGCTGTAGAAGGCTTAGGAGGTTATAGCTCAGGGTCAAATATCTaGGTCAGGGGTCAGAGGGTCAGGTGGGAGGTCAGTGGATGGGTC +
Preference number: 5 (lower is better)
Translates to: QAVEGLGGYSSGSNI*VRGQRVRWEVSGWV
Trigger: GACCCATCCACTGACCTCCCACCTGACCCTCTGACCCCTGACCCAGATATTTGACCCTGAGCTATAACCTCCTAAGCCTTCTACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527792.5
ENST00000529764.1
CDS CCA 90 bp TTACAAGAACCTCTCTACTGCACTTGGCTCATCCTCCTCCTTCCCTaGAAATATGTCCTCCCCAGCTTCCCAGATGGTGCCCCTCAGGCG +
Preference number: 5 (lower is better)
Translates to: LQEPLYCTWLILLLP*KYVLPSFPDGAPQA
Trigger: CGCCTGAGGGGCACCATCTGGGAAGCTGGGGAGGACATATTTCCAGGGAAGGAGGAGGATGAGCCAAGTGCAGTAGAGAGGTTCTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp CCAATACGCTGTCGCAGAACACTGTGTCATCGAAGTTCAGGTAGCACTCCTTCTGGACACTTGTGGCACTaGCTCTGGCCCCAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PIRCRRTLCHRSSGSTPSGHLWH*LWPQAV
Trigger: CACTGCCTGGGGCCAGAGCAAGTGCCACAAGTGTCC...AGAAGGAGTGCTACCTGAACTTCGATGACACAGTGTTCTGCGACAGCGTATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp AGTGGCTCCGGTCCCTGGACAGATGGTAGCCAGAGAGGCACTGACACTGGAAAGAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: SGSGPWTDGSQRGTDTGKKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...CTTTCCAGTGTCAGTGCCTCTCTGGCTACCATCTGTCCAGGGACCGGAGCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp TGTATTTATTGTACAAACCATGTGAGCCCGGCCGGCCCAGCCAGGCCATCTCACTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: CIYCTNHVSPAGPARPSHCVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...GTGAGATGGCCTGGCTGGGCCGGCCGGGCTCACATGGTTTGTACAATAAATACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp GGAAAAGTCACTCTCGCCCTGAATGGTGAGCGTCTGGTGGGAGGTGAGAATGTGTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: GKVTLALNGERLVGGENVCVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...CACATTCTCACCTCCCACCAGACGCTCACCATTCAGGGCGAGAGTGACTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS-3UTR CAA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGCGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLRAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGCGCGAAGCCGGCTTaGCAGACGCAGCGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRRAKPA*QTQRKE
Trigger: CTCCTTCCGCTGCGTCTGCAAAGCCGGCTTCGCGCG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCAGAAGTGAGGCCGAGCTCGCGGAAATCCCTCAGTGATCACCGAGGTCTGGGCGACTCCTCTAAAGCTTaGACTTCCATAAAGCCCCTA +
Preference number: 5 (lower is better)
Translates to: AEVRPSSRKSLSDHRGLGDSSKA*TSIKPL
Trigger: TAGGGGCTTTATGGAAGTCAAAGCTTTAGAGGAGTC...GCCCAGACCTCGGTGATCACTGAGGGATTTCCGCGAGCTCGGCCTCACTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CAA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGACAGCAGTCTTCCTGCTaGGTGAGGCCGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGQQSSC*VRPGRG
Trigger: CCCCCTCCCCGGCCTCACCAAGCAGGAAGACTGCTG...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGGCATTGCGCACTCGTaGATGTCCTGGCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQGIAHS*MSWQWV
Trigger: CACCCACTGCCAGGACATCAACGAGTGCGCAATGCC...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCGCACAGGTGGGGCTaGGCGCATTCGTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRPHRWG*AHSFRS
Trigger: GGACCTGAACGAATGCGCCAAGCCCCACCTGTGCGG...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp AATTTAAGTAACATGCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCATCCGGGCAAGAGCTaGGGTCCCGGCACTCGTCGA +
Preference number: 5 (lower is better)
Translates to: NLSNMLCKRSFELYPETLHPGKS*GPGTRR
Trigger: TCGACGAGTGCCGGGACCCAAGCTCTTGCCCGGATG...AAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGCATGTTACTTAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CAA 90 bp AGTGAGCAGAGTCACCTGGGGATGAATGAGCCACCTTCCACCCACTGTTTACAGGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: SEQSHLGMNEPPSTHCLQGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...CTGTAAACAGTGGGTGGAAGGTGGCTCATTCATCCCCAGGTGACTCTGCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CAA 90 bp TCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGTGCCTTCCTTTTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: SSSTPRPFLRGNSSGAFLLKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...AAGGAAGGCACCACTAGAATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CAA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCCTCAGTCCTCCGAGCTaGCCTGACACCCCCAGACTC +
Preference number: 5 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGLSPPS*PDTPRL
Trigger: GAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGAG...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530785.5
CDS-3UTR CAA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGAGTCGTGGTGGCAGTaGGGTGGCTCTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLESWWQ*GGSAAL
Trigger: CAGTGCAGCAGAGCCACCCAACTGCCACCACGACTC...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGACGCACTTGCCCTCCTaGCAAATCTCCGACCCGAAC +
Preference number: 5 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQTHLPS*QISDPN
Trigger: GTTCGGGTCGGAGATTTGCAAGGAGGGCAAGTGCGT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS TCA 90 bp ATCCTTGTTCTTCCCACTTTCTTCTGCTCATGCAGTAAAGGAACTTaGCCCTCCCCCGGGACACACTTTCCTGAGGCCTCTCTGATGGAG +
Preference number: 5 (lower is better)
Translates to: ILVLPTFFCSCSKGT*PSPGTHFPEASLME
Trigger: CTCCATCAGAGAGGCCTCAGGAAAGTGTGTCCCGGGGGAGGGTCAAGTTCCTTTACTGCATGAGCAGAAGAAAGTGGGAAGAACAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CCTGCTGAGAGGCTCACAGGCACAATCCATTCAATTTGTCCAATGTaGAGCTCAGCATTTTCCCTCCCAAACATGCCCACGCATGAGGAC +
Preference number: 5 (lower is better)
Translates to: PAERLTGTIHSICPM*SSAFSLPNMPTHED
Trigger: GTCCTCATGCGTGGGCATGTTTGGGAGGGAAAATGCTGAGCTCCACATTGGACAAATTGAATGGATTGTGCCTGTGAGCCTCTCAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp CACTCTCCTGGCATCACCTCCTCAGCCTATACCAAAGCCCCACTTTaGAAGAGCAAGAGTCCCCAGGTCTTGTTCTTCTTCACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: HSPGITSSAYTKAPL*KSKSPQVLFFFTFC
Trigger: GCAGAAAGTGAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAGTGGGGCTTTGGTATAGGCTGAGGAGGTGATGCCAGGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 90 bp GATGGATGGATGGATGAAGGATGGTTGGATGGGTGGATGGATGGATaGAGAAAGGCCACAGTGTGTCTAGGGAATTACTGCTCCCTGCCA +
Preference number: 5 (lower is better)
Translates to: DGWMDEGWLDGWMDG*RKATVCLGNYCSLP
Trigger: TGGCAGGGAGCAGTAATTCCCTAGACACACTGTGGCCTTTCTCCATCCATCCATCCACCCATCCAACCATCCTTCATCCATCCATCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp CCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGCTGGGCAGATCTCCTaGAACGCAGCGGTGCCATCT +
Preference number: 5 (lower is better)
Translates to: PRVKRHDLIYQFLGNTLWAGQIS*NAAVPS
Trigger: AGATGGCACCGCTGCGTTCAAGGAGATCTGCCCAGC...CCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp AAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGTCCTGCTGGGTCACGTaGGTGGCCAATACGCTGTCG +
Preference number: 5 (lower is better)
Translates to: KEARSDLSVSRKHPLGGRSCWVT*VANTLS
Trigger: CGACAGCGTATTGGCCACCAACGTGACCCAGCAGGA...CCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQCVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCAAACTGTCCTCATCTCTaGGGGGCTTCCCCAACAGCA +
Preference number: 5 (lower is better)
Translates to: AHVRREHQFASKAKGKEANCPHL*GASPTA
Trigger: TGCTGTTGGGGAAGCCCCCAAGAGATGAGGACAGTT...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS TCA 90 bp GAAGTGTTGGGGCGGGAGAAGGGAGTCAGATCTGGGATCAGCAGCTaGGTATTTGCAGTTAGGGTCTCTGGGAGTTCAACAATCATGTCT +
Preference number: 5 (lower is better)
Translates to: EVLGREKGVRSGISS*VFAVRVSGSSTIMS
Trigger: AGACATGATTGTTGAACTCCCAGAGACCCTAACTGCAAATACTCAGCTGCTGATCCCAGATCTGACTCCCTTCTCCCGCCCCAACACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS-3UTR CAA 90 bp AAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCGGCTTGTTCTCGCATTaGCCATCCGGGCAAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KRHDLIYQFLGNTLWEEGGLFSH*PSGQEL
Trigger: AAGCTCTTGCCCGGATGGCAAATGCGAGAACAAGCC...GCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000532932.5
CDS-3UTR CAA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp GCTTTGCAAACGCAGCTTCGAGCTCTACCCCGAGACCCTTCCTACGTGGAAATTCTAGTGGTGCCTTCCTaGGCAAAGTTCGTTGAGAAA +
Preference number: 5 (lower is better)
Translates to: ALQTQLRALPRDPSYVEILVVPS*AKFVEK
Trigger: TTTCTCAACGAACTTTGCCAAGGAAGGCACCACTAG...AATTTCCACGTAGGAAGGGTCTCGGGGTAGAGCTCGAAGCTGCGTTTGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS-3UTR CAA 90 bp GCCCACGTCAGACGTGAACATCAATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACTCTTCTCCTCCGGTTaGTCTGCAATGCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: AHVRREHQFASKAKGKEALFSSG*SAMHCV
Trigger: TACACAGTGCATTGCAGACAAACCGGAGGAGAAGAG...TGCCTCTTTACCCTTGGCTTTCGAAGCAAATTGATGTTCACGTCTGACGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS-3UTR CAA 90 bp GCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGTTGAAGCTCCCGGGCTaGTTCTCGCATTTGCCATCC +
Preference number: 5 (lower is better)
Translates to: AKGKEARSDLSVSRKHPLLKLPG*FSHLPS
Trigger: GGATGGCAAATGCGAGAACAAGCCCGGGAGCTTCAA...CAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp CACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGAAGGCAGGCAGAAAGATCCTGGCGTGTaGCTGCAGATGCCATTGTCA +
Preference number: 5 (lower is better)
Translates to: HDLIYQFLGNTLWEEGRQKDPGV*LQMPLS
Trigger: TGACAATGGCATCTGCAGCAACACGCCAGGATCTTT...CTGCCTGCCTTCCTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000529189.5
ENST00000530785.5
ENST00000532932.5
CDS-3UTR CAA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGTGCGTGTTCACGCACTaGCCCTCCTTGCAAATCTCC +
Preference number: 5 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWECVFTH*PSLQIS
Trigger: GGAGATTTGCAAGGAGGGCAAGTGCGTGAACACGCA...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp AGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGGTGTCCCAGAAGGAATaGCTCTCGCTCTGCGATGTC +
Preference number: 5 (lower is better)
Translates to: RVKRHDLIYQFLGNTLWEVSQKE*LSLCDV
Trigger: GACATCGCAGAGCGAGAGCAATTCCTTCTGGGACAC...CTCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS-3UTR CAA 90 bp AATTTGCTTCGAAAGCCAAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAACTCCGTTCCGGCAGTaGGACTCGTCCAGGCACTCG +
Preference number: 5 (lower is better)
Translates to: NLLRKPRVKRHDLIYQFLTPFRQ*DSSRHS
Trigger: CGAGTGCCTGGACGAGTCCAACTGCCGGAACGGAGT...TAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTTGGCTTTCGAAGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301873.11
CDS GCA 90 bp CTTTGGAAGAGCAAGAGTCCCCAGGTCTTGTTCTTCTTCACTTTCTaGCCACATATCTCTGGCCTCTGTCCCTATCATATCCCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LWKSKSPQVLFFFTF*PHISGLCPYHIPKA
Trigger: AGCTTTTGGGATATGATAGGGACAGAGGCCAGAGATATGTGGGCAGAAAGTGAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS-3UTR CAA 90 bp AAGGGTAAAGAGGCACGATCTGATTTATCAGTTTCTAGGAAACACCCTCTGGGAGCACTCATCTATGTCTaGGCATTTCCTGCCACCCAC +
Preference number: 5 (lower is better)
Translates to: KGKEARSDLSVSRKHPLGALIYV*AFPATH
Trigger: GTGGGTGGCAGGAAATGCCAAGACATAGATGAGTGC...TCCCAGAGGGTGTTTCCTAGAAACTGATAAATCAGATCGTGCCTCTTTACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301873.11
ENST00000322147.8
CDS CCA 90 bp GCACCTCAAGGGCCTCACACAAGTTCAGAACCTGAATTTCCACTTTaGTTTCAAAGTATGTACAGCAGGAAGTCTGCTGTGTCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: APQGPHTSSEPEFPL*FQSMYSRKSAVSVH
Trigger: ATGCACAGACACAGCAGACTTCCTGCTGTACATACTTTGAAACCAAAGTGGAAATTCAGGTTCTGAACTTGTGTGAGGCCCTTGAGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529582.5
CDS GCA 90 bp AGACTTATTGTCTCACCAGTTATTATTTTACAAGAACCTCTCTACTaGACTTGGCTCATCCTCCTCCTTCCCTGGAAATATGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: RLIVSPVIILQEPLY*TWLILLLPWKYVLP
Trigger: GGGGAGGACATATTTCCAGGGAAGGAGGAGGATGAGCCAAGTGCAGTAGAGAGGTTCTTGTAAAATAATAACTGGTGAGACAATAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp AGGTCCGCTTGCAGATCACCGGCGCAAAGACCACCTTaGAGCGCTCGCGGGCCAGCGCCCCGCCCCCGCCTG +
Preference number: 6 (lower is better)
Translates to: RSACRSPAQRPP*SARGPAPRPRL
Trigger: CAGGCGGGGGCGGGGCGCTGGCCCGCGAGCGCTTCAAGGTGGTCTTTGCGCCGGTGATCTGCAAGCGGACCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS GCA 72 bp GCCCGGCAGGTTGACGCAGCGGCCAGGGCGGCAGGCTaGCGGGTCCTGGCACTCGTCCACGTCCATCTCTTC +
Preference number: 6 (lower is better)
Translates to: ARQVDAAARAAG*RVLALVHVHLF
Trigger: GAAGAGATGGACGTGGACGAGTGCCAGGACCCGGCAGCCTGCCGCCCTGGCCGCTGCGTCAACCTGCCGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS CCA 72 bp CCCACCGGAAGGCGGACCGCGCACCTCGCGGGGGTGTaGGTCTCTTCCCTGGAACGCGGGGTTGAGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PTGRRTAHLAGV*VSSLERGVERA
Trigger: TGCCCTCTCAACCCCGCGTTCCAGGGAAGAGACCCACACCCCCGCGAGGTGCGCGGTCCGCCTTCCGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS CAA 72 bp CAGGTCCGCTTGCAGATCACCGGCGCAAAGACCACCTaGAAGCGCTCGCGGGCCAGCGCCCCGCCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: QVRLQITGAKTT*KRSRASAPPPP
Trigger: AGGCGGGGGCGGGGCGCTGGCCCGCGAGCGCTTCAAGGTGGTCTTTGCGCCGGTGATCTGCAAGCGGACCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000528516.5
CDS GCA 72 bp TTCACGTCTGCGGCGGAAAGACCTAGCCTCGGACTCTaGCCCACCGGAAGGCGGACCGCGCACCTCGCGGGG +
Preference number: 6 (lower is better)
Translates to: FTSAAERPSLGL*PTGRRTAHLAG
Trigger: CCCCGCGAGGTGCGCGGTCCGCCTTCCGGTGGGGCAGAGTCCGAGGCTAGGTCTTTCCGCCGCAGACGTGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS CCA 72 bp GGACCGCGCACCTCGCGGGGGTGTGGGTCTCTTCCCTaGAACGCGGGGTTGAGAGGGCAGCCTCTACTCCCG +
Preference number: 6 (lower is better)
Translates to: GPRTSRGCGSLP*NAGLRGQPLLP
Trigger: CGGGAGTAGAGGCTGCCCTCTCAACCCCGCGTTCCAGGGAAGAGACCCACACCCCCGCGAGGTGCGCGGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529189.5
CDS TCA 72 bp GGGCGGGGAGGCCTGCGTAGAGCGAGATACCGAGGCTaGGGGAGAGAGGTGGCCCTGCCGGGTCACACTGAC +
Preference number: 6 (lower is better)
Translates to: GRGGLRRARYRG*GREVALPGHTD
Trigger: GTCAGTGTGACCCGGCAGGGCCACCTCTCTCCCTCAGCCTCGGTATCTCGCTCTACGCAGGCCTCCCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530866.5
CDS GCA 72 bp TCCACGTCCATCTCTTCCGGGCTCAGGCACTGGCGCTaGGCGGGACTGTACTCGGCAGGGGGCGTGCAGGCA +
Preference number: 6 (lower is better)
Translates to: STSISSGLRHWR*AGLYSAGGVQA
Trigger: TGCCTGCACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGACGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS GCA 72 bp GGCCGGGCAGGAGTCGTGGTGGCAGTTGGGTGGCTCTaGTGCACTGACCTCTCCTCACTCACCGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: GRAGVVVAVGWL*CTDLSSLTGCG
Trigger: CCCGCAGCCGGTGAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528966.5
CDS CCA 72 bp CACTCGTCCACGTCCATCTCTTCCGGGCTCAGGCACTaGCGCTGCGCGGGACTGTACTCGGCAGGGGGCGTG +
Preference number: 6 (lower is better)
Translates to: HSSTSISSGLRH*RCAGLYSAGGV
Trigger: CACGCCCCCTGCCGAGTACAGTCCCGCGCAGCGCCAGTGCCTGAGCCCGGAAGAGATGGACGTGGACGAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000529582.5
ENST00000530785.5
ENST00000530866.5
ENST00000532932.5
CDS CAA 90 bp GGGAGATCAGCTCGGGGTAGGGCCGGGCAGGAGTCGTGGTGGCAGTaGGGTGGCTCTGCTGCACTGACCTCTCCTCACTCACCGGCTGCG +
Preference number: 6 (lower is better)
Translates to: GRSARGRAGQESWWQ*GGSAALTSPHSPAA
Trigger: CGCAGCCGGTGAGTGAGGAGAGGTCAGTGCAGCAGAGCCACCCAACTGCCACCACGACTCCTGCCCGGCCCTACCCCGAGCTGATCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528966.5
CDS TCA 72 bp CTGCACTCCTGTGTCGGCTGCTTGGGCAGAGTGTCCTaGAAGCAGCGGCCCAGGGGCTTCTGGGTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LHSCVGCLGRVS*KQRPRGFWVGG
Trigger: GCCGCCCACCCAGAAGCCCCTGGGCCGCTGCTTTCAGGACACTCTGCCCAAGCAGCCGACACAGGAGTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS CCA 72 bp ACATGCACTCGTCGATGTCTGCGGGGTGACAAACACTaGCCGCTCCGGTCCCGCAGCTGCAGCCCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: TCTRRCLRGDKH*PLRSRSCSPEA
Trigger: CGCCTCCGGGCTGCAGCTGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS TCA 72 bp AGGCCTCACCCTGCTTCTGGGTGGCACACAGTGCCCTaGCGACCAGGTCAGGTGCTGCCAGGGTCCCTAGGC +
Preference number: 6 (lower is better)
Translates to: RPHPASGWHTVP*RPGQVLPGSLG
Trigger: GCCTAGGGACCCTGGCAGCACCTGACCTGGTCGTCAGGGCACTGTGTGCCACCCAGAAGCAGGGTGAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp AGCACAGGCCTCACCCTGCTTCTGGGTGGCACACAGTaGCCTGACGACCAGGTCAGGTGCTGCCAGGGTCCC +
Preference number: 6 (lower is better)
Translates to: STGLTLLLGGTQ*PDDQVRCCQGP
Trigger: GGGACCCTGGCAGCACCTGACCTGGTCGTCAGGGCACTGTGTGCCACCCAGAAGCAGGGTGAGGCCTGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp TCCGGGGGACACAGGCACTGGTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGGAGAGGGCACACCACC +
Preference number: 6 (lower is better)
Translates to: SGGHRHWFREEH*PPFMQGRGHTT
Trigger: GGTGGTGTGCCCTCTCCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAACCAGTGCCTGTGTCCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000530866.5
CDS CCA 72 bp GGCGGGCGGAGCCGCAGGGCGCTTACCACGGTGGGCTaGGATGCCGTAGTTGACGATGTTGTTGTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GGRSRRALTTVG*DAVVDDVVVLG
Trigger: ACCCAGGACAACAACATCGTCAACTACGGCATCCCAGCCCACCGTGGTAAGCGCCCTGCGGCTCCGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526124.1
CDS CCA 72 bp TCCGGGGGACACAGGCACTGGTTTCGCGAGGAGCACTaGCCGCCATTCATGCAGGGGAGAGGGCACACCAGC +
Preference number: 6 (lower is better)
Translates to: SGGHRHWFREEH*PPFMQGRGHTS
Trigger: GCTGGTGTGCCCTCTCCCCTGCATGAATGGCGGCCAGTGCTCCTCGCGAAACCAGTGCCTGTGTCCCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS TCA 72 bp AATGAGCCACCTTCCACCCACTGTTTACAGACAGCGTaGCCCGCTCCCCGGCTTCAGCGCGTAGGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: NEPPSTHCLQTA*PAPRLQRVGGG
Trigger: GCCGCCCCCTACGCGCTGAAGCCGGGGAGCGGGTCACGCTGTCTGTAAACAGTGGGTGGAAGGTGGCTCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527339.1
CDS CCA 72 bp ACGCGGAAGCCGGAGCCCGTGAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGCGTCATGTTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TRKPEPVSVSVL*PFSPMSVMLEP
Trigger: GGGCTCCAACATGACGCTCATCGGAGAGAACGGCCACAGCACAGACACGCTCACGGGCTCCGGCTTCCGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000526825.5
ENST00000526927.5
ENST00000530866.5
CDS CCA 72 bp GCCCAGTCTCTGGTCAGAGCTGTGGCCTGTGGATCCTaGGTGCGGAGTGGGACTGGAGCAGCCACCAAGCTG +
Preference number: 6 (lower is better)
Translates to: AQSLVRAVACGS*VRSGTGAATKL
Trigger: CAGCTTGGTGGCTGCTCCAGTCCCACTCCGCACCCAGGATCCACAGGCCACAGCTCTGACCAGAGACTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CCA 72 bp CAGCGGAAGCCGGAGCCCGTGAGCGTGTCTGTGCTGTaGCCGTTCTCTCCGATGAGCGTCATGTTGGAGCCC +
Preference number: 6 (lower is better)
Translates to: QRKPEPVSVSVL*PFSPMSVMLEP
Trigger: GGGCTCCAACATGACGCTCATCGGAGAGAACGGCCACAGCACAGACACGCTCACGGGCTCCGGCTTCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528516.5
CDS CCA 72 bp GGGACAGTCAGCGCCCACTTCCCCACGTACAGGCCCTaGCTTCTGCACTCCTGTGTCGGCTGCTTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: GTVSAHFPTYRP*LLHSCVGCLGR
Trigger: TCTGCCCAAGCAGCCGACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGACTGTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS TCA 72 bp GACCCGAACAACATGCACTCGTCGATGTCTGCGGGGTaGCAAACACTGGCCGCTCCGGTCCCGCAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: DPNNMHSSMSAG*QTLAAPVPQLQ
Trigger: CTGCAGCTGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS GCA 72 bp TGCCCACCCACTGGCGACCTTCCCGGGTTTGCCAGTTaGCTGGTACCTTCTGCTGAGATCTGTCCCGGGCCT +
Preference number: 6 (lower is better)
Translates to: CPPTGDLPGFAS*LVPSAEICPGP
Trigger: AGGCCCGGGACAGATCTCAGCAGAAGGTACCAGGCAACTGGCAAACCCGGGAAGGTCGCCAGTGGGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS GCA 72 bp TCAGCGCCCACTTCCCCACGTACAGGCCCTGGCTTCTaGACTCCTGTGTCGGCTGCTTGGGCAGAGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SAPTSPRTGPGF*TPVSAAWAECP
Trigger: AGGACACTCTGCCCAAGCAGCCGACACAGGAGTGCAGAAGCCAGGGCCTGTACGTGGGGAAGTGGGCGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS GCA 72 bp GGGCTTAGGGCTGCAGCCCGCCGCCTATTTCCCAACTaGCAGGGGGCGCCATTTCCCACATTTGGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GLRAAARRLFPN*QGAPFPTFGFQ
Trigger: CTGGAAGCCAAATGTGGGAAATGGCGCCCCCTGGCAGTTGGGAAATAGGCGGCGGGCTGCAGCCCTAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530990.1
CDS CCA 72 bp GGTCAGAGCTGTGGCCTGTGGATCCTGGGTGCGGAGTaGGACTGGAGCAGCCACCAAGCTGAGCATGCTGGA +
Preference number: 6 (lower is better)
Translates to: GQSCGLWILGAE*DWSSHQAEHAG
Trigger: TCCAGCATGCTCAGCTTGGTGGCTGCTCCAGTCCCACTCCGCACCCAGGATCCACAGGCCACAGCTCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CCA 72 bp CACCCACTGGCGACCTTCCCGGGTTTGCCAGTTGCCTaGTACCTTCTGCTGAGATCTGTCCCGGGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: HPLATFPGLPVA*YLLLRSVPGLG
Trigger: CCCTAGGCCCGGGACAGATCTCAGCAGAAGGTACCAGGCAACTGGCAAACCCGGGAAGGTCGCCAGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS CCA 72 bp GGGCCCGGCACGCACTCTCCGTGGCCACAGATGTTCTaGTTCAGTCGGCACTCATCAGTCTCTGCGGGCATG +
Preference number: 6 (lower is better)
Translates to: GPGTHSPWPQMF*FSRHSSVSAGM
Trigger: CATGCCCGCAGAGACTGATGAGTGCCGACTGAACCAGAACATCTGTGGCCACGGAGAGTGCGTGCCGGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS TCA 72 bp CCTGGGTGCGGAGTGGGACTGGAGCAGCCACCAAGCTaGGCATGCTGGAACATACCCACAGGCTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: PGCGVGLEQPPS*ACWNIPTGFSL
Trigger: GAGGCTGAAGCCTGTGGGTATGTTCCAGCATGCTCAGCTTGGTGGCTGCTCCAGTCCCACTCCGCACCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS TCA 72 bp GCTTGGTGGCCTCCCTCTCAGTCCTCCGAGCTTGCCTaGCACCCCCAGACTCTGATAGTTCCCAGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AWWPPSQSSELA*HPQTLIVPSWS
Trigger: GCTCCAGCTGGGAACTATCAGAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGAGAGGGAGGCCACCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS TCA 72 bp GACCCTCCCCCGGGACACACTTTCCTGAGGCCTCTCTaGTGGAGCCAGTTGTTGCCCACATCCCAGACCCCT +
Preference number: 6 (lower is better)
Translates to: DPPPGHTFLRPL*WSQLLPTSQTP
Trigger: AGGGGTCTGGGATGTGGGCAACAACTGGCTCCATCAGAGAGGCCTCAGGAAAGTGTGTCCCGGGGGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp CAGGGCTTGGTGGCCTCCCTCTCAGTCCTCCGAGCTTaGCTGACACCCCCAGACTCTGATAGTTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: QGLVASLSVLRA*LTPPDSDSSQL
Trigger: CAGCTGGGAACTATCAGAGTCTGGGGGTGTCAGGCAAGCTCGGAGGACTGAGAGGGAGGCCACCAAGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CCA 72 bp CAGCAGCACTCAGAAGCACAGGCCTCACCCTGCTTCTaGGTGGCACACAGTGCCCTGACGACCAGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: QQHSEAQASPCF*VAHSALTTRSG
Trigger: ACCTGACCTGGTCGTCAGGGCACTGTGTGCCACCCAGAAGCAGGGTGAGGCCTGTGCTTCTGAGTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp CCTCTGAGGAAAGGGCTAAAGGGTGGGGACAGCCTTTaGCCAGGGCTCACGGAGGTCCCAGGAGGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: PLRKGLKGGDSL*PGLTEVPGGSL
Trigger: CAGACTTCCTCCTGGGACCTCCGTGAGCCCTGGCCAAAGGCTGTCCCCACCCTTTAGCCCTTTCCTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530866.5
CDS GCA 72 bp AATCTCCGACCCGAACAACATGCACTCGTCGATGTCTaGGGGGTGACAAACACTGGCCGCTCCGGTCCCGCA +
Preference number: 6 (lower is better)
Translates to: NLRPEQHALVDV*GVTNTGRSGPA
Trigger: TGCGGGACCGGAGCGGCCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS CCA 72 bp CAGGCCCACCCAAGACTCCATAGCTCCCCCGGTCCATaGTCCATCATTCCAGGTGGGTATGCTGGCATCTCC +
Preference number: 6 (lower is better)
Translates to: QAHPRLHSSPGP*SIIPGGYAGIS
Trigger: GGAGATGCCAGCATACCCACCTGGAATGATGGACCATGGACCGGGGGAGCTATGGAGTCTTGGGTGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp CTCCTTCCTCCTCACTGTCTGGCAATGCCCAGTCTCTaGTCAGAGCTGTGGCCTGTGGATCCTGGGTGCGGA +
Preference number: 6 (lower is better)
Translates to: LLPPHCLAMPSL*SELWPVDPGCG
Trigger: TCCGCACCCAGGATCCACAGGCCACAGCTCTGACCAGAGACTGGGCATTGCCAGACAGTGAGGAGGAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CAA 72 bp CACCCTAGTGCCCACCCACTGGCGACCTTCCCGGGTTaGCCAGTTGCCTGGTACCTTCTGCTGAGATCTGTC +
Preference number: 6 (lower is better)
Translates to: HPSAHPLATFPG*PVAWYLLLRSV
Trigger: GACAGATCTCAGCAGAAGGTACCAGGCAACTGGCAAACCCGGGAAGGTCGCCAGTGGGTGGGCACTAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524798.1
CDS CAA 90 bp CCACAAGGCTCTGCTAGATGCTCTGCTTACCCAACCCACCTTGGGTaGGCTAAGCAGGCCCACCCAAGACTCCATAGCTCCCCCGGTCCA +
Preference number: 6 (lower is better)
Translates to: PQGSARCSAYPTHLG*AKQAHPRLHSSPGP
Trigger: TGGACCGGGGGAGCTATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CAA 90 bp TCCACTGTTCTCAAGTCCTCACCTCCACCTTCTCTCTCACAGGGCTaGGTGGCCTCCCTCTCAGTCCTCCGAGCTTGCCTGACACCCCCA +
Preference number: 6 (lower is better)
Translates to: STVLKSSPPPSLSQG*VASLSVLRACLTPP
Trigger: TGGGGGTGTCAGGCAAGCTCGGAGGACTGAGAGGGAGGCCACCAAGCCCTGTGAGAGAGAAGGTGGAGGTGAGGACTTGAGAACAGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS TCA 72 bp CCGTTCTCTCCGATGAGCGTCATGTTGGAGCCCTGCTaGCAACTGTCCCGACACTGGCCCTTGAGACAGGTC +
Preference number: 6 (lower is better)
Translates to: PFSPMSVMLEPC*QLSRHWPLRQV
Trigger: GACCTGTCTCAAGGGCCAGTGTCGGGACAGTTGTCAGCAGGGCTCCAACATGACGCTCATCGGAGAGAACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301873.11
ENST00000322147.8
ENST00000526825.5
ENST00000526927.5
ENST00000528516.5
CDS TCA 72 bp CAGGGCGCTTACCACGGTGGGCTGGGATGCCGTAGTTaGCGATGTTGTTGTCCTGGGTGTAGCCCTTTCCGT +
Preference number: 6 (lower is better)
Translates to: QGAYHGGLGCRS*RCCCPGCSPFR
Trigger: ACGGAAAGGGCTACACCCAGGACAACAACATCGTCAACTACGGCATCCCAGCCCACCGTGGTAAGCGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526124.1
CDS GCA 72 bp CTCCCCCGGTCCATGGTCCATCATTCCAGGTGGGTATaGTGGCATCTCCTGCTGAGAGGCTCACAGGCACAA +
Preference number: 6 (lower is better)
Translates to: LPRSMVHHSRWV*WHLLLRGSQAQ
Trigger: TTGTGCCTGTGAGCCTCTCAGCAGGAGATGCCAGCATACCCACCTGGAATGATGGACCATGGACCGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp CTCCTGCCATGCAGCCTGGGCCATAACAGTGAACTCTaGTCTGCCCCAAACTCACCTGGCCAGTGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LLPCSLGHNSEL*SAPNSPGQWAL
Trigger: CAAAGCCCACTGGCCAGGTGAGTTTGGGGCAGAGCAGAGTTCACTGTTATGGCCCAGGCTGCATGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS GCA 72 bp ACAGATGTTCTGGTTCAGTCGGCACTCATCAGTCTCTaGGGGCATGGCCAGGTCAAGCGGCAGAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: TDVLVQSALISL*GHGQVKRQSRE
Trigger: CTCCCTGCTCTGCCGCTTGACCTGGCCATGCCCGCAGAGACTGATGAGTGCCGACTGAACCAGAACATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS CAA 90 bp AGTGTCCACAAGGCTCTGCTAGATGCTCTGCTTACCCAACCCACCTaGGGTTGGCTAAGCAGGCCCACCCAAGACTCCATAGCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: SVHKALLDALLTQPT*GWLSRPTQDSIAPP
Trigger: CGGGGGAGCTATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTTGTGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp GAGCTCAGCATTTTCCCTCCCAAACATGCCCACGCATaGGGACCCATTCCCAGTGAGCAGCACTACCCCCTC +
Preference number: 6 (lower is better)
Translates to: ELSIFPPKHAHA*GPIPSEQHYPL
Trigger: GAGGGGGTAGTGCTGCTCACTGGGAATGGGTCCTCATGCGTGGGCATGTTTGGGAGGGAAAATGCTGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp CTGCTAGATGCTCTGCTTACCCAACCCACCTTGGGTTaGCTAAGCAGGCCCACCCAAGACTCCATAGCTCCC +
Preference number: 6 (lower is better)
Translates to: LLDALLTQPTLG*LSRPTQDSIAP
Trigger: GGGAGCTATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp TCCCAAACATGCCCACGCATGAGGACCCATTCCCAGTaGGCAGCACTACCCCCTCACTCACCCAAACTGGAA +
Preference number: 6 (lower is better)
Translates to: SQTCPRMRTHSQ*AALPPHSPKLE
Trigger: TTCCAGTTTGGGTGAGTGAGGGGGTAGTGCTGCTCACTGGGAATGGGTCCTCATGCGTGGGCATGTTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp GTTTCGAACATCCGCGTGGACAACCAGGTCAGCCTCTaGCCTCACATTCCTGGATCTCTCGGCTTCCGTGAC +
Preference number: 6 (lower is better)
Translates to: VSNIRVDNQVSL*PHIPGSLGFRD
Trigger: GTCACGGAAGCCGAGAGATCCAGGAATGTGAGGTCAGAGGCTGACCTGGTTGTCCACGCGGATGTTCGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CCA 72 bp CCTCTCTACTGCACTTGGCTCATCCTCCTCCTTCCCTaGAAATATGTCCTCCCCAGCTTCCCAGATGGTGCC +
Preference number: 6 (lower is better)
Translates to: PLYCTWLILLLP*KYVLPSFPDGA
Trigger: GGCACCATCTGGGAAGCTGGGGAGGACATATTTCCAGGGAAGGAGGAGGATGAGCCAAGTGCAGTAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp AGTGAACTCTGCTCTGCCCCAAACTCACCTGGCCAGTaGGCTTTGCAGGCTGTTCTCTTTGCCTGGAGTACC +
Preference number: 6 (lower is better)
Translates to: SELCSAPNSPGQ*ALQAVLFAWST
Trigger: GGTACTCCAGGCAAAGAGAACAGCCTGCAAAGCCCACTGGCCAGGTGAGTTTGGGGCAGAGCAGAGTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532932.5
CDS CAA 72 bp TCTGCTAGATGCTCTGCTTACCCAACCCACCTTGGGTaGGCTAAGCAGGCCCACCCAAGACTCCATAGCTCC +
Preference number: 6 (lower is better)
Translates to: SARCSAYPTHLG*AKQAHPRLHSS
Trigger: GGAGCTATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp ATGCCCTGGGATACTTCCAAACCGCCACTGTTCTCCTaGGTCCCCTACTCAACCCAGGCCCTTCACTGTGTA +
Preference number: 6 (lower is better)
Translates to: MPWDTSKPPLFS*VPYSTQALHCV
Trigger: TACACAGTGAAGGGCCTGGGTTGAGTAGGGGACTCAGGAGAACAGTGGCGGTTTGGAAGTATCCCAGGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp CCCCTGAACTGTCAGTGTCCACAAGGCTCTGCTAGATaGTCTGCTTACCCAACCCACCTTGGGTTGGCTAAG +
Preference number: 6 (lower is better)
Translates to: PLNCQCPQGSAR*SAYPTHLGLAK
Trigger: CTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTTGTGGACACTGACAGTTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp CTGGCCTCTGTCCCTATCATATCCCAAAAGCTACCCTaGCAAGGCTACCAGGGACCTTCTTGCCAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: LASVPIISQKLP*QGYQGPSCQGR
Trigger: CCTTCCTTGGCAAGAAGGTCCCTGGTAGCCTTGGCAGGGTAGCTTTTGGGATATGATAGGGACAGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS GCA 72 bp ACTTGCCCTCCTTGCAAATCTCCGACCCGAACAACATaGACTCGTCGATGTCTGCGGGGTGACAAACACTGG +
Preference number: 6 (lower is better)
Translates to: TCPPCKSPTRTT*TRRCLRGDKHW
Trigger: CCAGTGTTTGTCACCCCGCAGACATCGACGAGTGCATGTTGTTCGGGTCGGAGATTTGCAAGGAGGGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532661.5
CDS CCA 72 bp CCAAGGGGATTTTCATCACTCAGATCTGCTCCACCCTaGGGCCCTCAGAGGCTGCCTTCTTTCCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: PRGFSSLRSAPP*GPQRLPSFHCS
Trigger: AGAACAGTGGAAAGAAGGCAGCCTCTGAGGGCCCCAGGGTGGAGCAGATCTGAGTGATGAAAATCCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CAA 72 bp AAGGCTCTGCTAGATGCTCTGCTTACCCAACCCACCTaGGGTTGGCTAAGCAGGCCCACCCAAGACTCCATA +
Preference number: 6 (lower is better)
Translates to: KALLDALLTQPT*GWLSRPTQDSI
Trigger: TATGGAGTCTTGGGTGGGCCTGCTTAGCCAACCCAAGGTGGGTTGGGTAAGCAGAGCATCTAGCAGAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS TCA 72 bp GGGCGGGAGAAGGGAGTCAGATCTGGGATCAGCAGCTaGGTATTTGCAGTTAGGGTCTCTGGGAGTTCAACA +
Preference number: 6 (lower is better)
Translates to: GREKGVRSGISS*VFAVRVSGSST
Trigger: TGTTGAACTCCCAGAGACCCTAACTGCAAATACTCAGCTGCTGATCCCAGATCTGACTCCCTTCTCCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS CAA 90 bp TGGGGCGGGAGAAGGGAGTCAGATCTGGGATCAGCAGCTGAGTATTaGCAGTTAGGGTCTCTGGGAGTTCAACAATCATGTCTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: WGGRRESDLGSAAEY*QLGSLGVQQSCLQV
Trigger: GACCTGGAGACATGATTGTTGAACTCCCAGAGACCCTAACTGCAAATACTCAGCTGCTGATCCCAGATCTGACTCCCTTCTCCCGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS GCA 72 bp CCCACTGAACATCGTTATCTACATCCATTCCCCTCCTaGTCCTGTTACAGCAAGAGATGTCCCTTCCGCTGG +
Preference number: 6 (lower is better)
Translates to: PTEHRYLHPFPS*SCYSKRCPFRW
Trigger: CCAGCGGAAGGGACATCTCTTGCTGTAACAGGAGCAGGAGGGGAATGGATGTAGATAACGATGTTCAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp GGCATCACCTCCTCAGCCTATACCAAAGCCCCACTTTaGAAGAGCAAGAGTCCCCAGGTCTTGTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GITSSAYTKAPL*KSKSPQVLFFF
Trigger: GAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAGTGGGGCTTTGGTATAGGCTGAGGAGGTGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp TTTTTCTCTCCATCCTGGGAGTTTCGAACATCCGCGTaGACAACCAGGTCAGCCTCTGACCTCACATTCCTG +
Preference number: 6 (lower is better)
Translates to: FFSPSWEFRTSA*TTRSASDLTFL
Trigger: CAGGAATGTGAGGTCAGAGGCTGACCTGGTTGTCCACGCGGATGTTCGAAACTCCCAGGATGGAGAGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525443.1
ENST00000530785.5
CDS CAA 90 bp GCCTATACCAAAGCCCCACTTTGGAAGAGCAAGAGTCCCCAGGTCTaGTTCTTCTTCACTTTCTGCCCACATATCTCTGGCCTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: AYTKAPLWKSKSPQV*FFFTFCPHISGLCP
Trigger: GGGACAGAGGCCAGAGATATGTGGGCAGAAAGTGAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAGTGGGGCTTTGGTATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CAA 90 bp CCACTCTCCTGGCATCACCTCCTCAGCCTATACCAAAGCCCCACTTaGGAAGAGCAAGAGTCCCCAGGTCTTGTTCTTCTTCACTTTCTG +
Preference number: 6 (lower is better)
Translates to: PLSWHHLLSLYQSPT*EEQESPGLVLLHFL
Trigger: CAGAAAGTGAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAGTGGGGCTTTGGTATAGGCTGAGGAGGTGATGCCAGGAGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp ATTTCCCAACTGCCAGGGGGCGCCATTTCCCACATTTaGCTTCCAGATGAAGAAACTGAAGATCTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: ISQLPGGAISHI*LPDEETEDLGR
Trigger: CCTTCCCAGATCTTCAGTTTCTTCATCTGGAAGCCAAATGTGGGAAATGGCGCCCCCTGGCAGTTGGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530990.1
CDS CAA 90 bp CTCCAGGTCAAGGGTCAGGGGTTAGATTCTGGGGTTAGGGTGTGTTaGCATAGTAGTCACATGATCAGGTTGAATGGCCTTGGGTTACAG +
Preference number: 6 (lower is better)
Translates to: LQVKGQGLDSGVRVC*HSSHMIRLNGLGLQ
Trigger: CTGTAACCCAAGGCCATTCAACCTGATCATGTGACTACTATGCAAACACACCCTAACCCCAGAATCTAACCCCTGACCCTTGACCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS CCA 72 bp ATGGATGGATGGATGGATGAAGGATGGTTGGATGGGTaGATGGATGGATGGAGAAAGGCCACAGTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: MDGWMDEGWLDG*MDGWRKATVCL
Trigger: TAGACACACTGTGGCCTTTCTCCATCCATCCATCCACCCATCCAACCATCCTTCATCCATCCATCCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CAA 72 bp AAAGCCCCACTTTGGAAGAGCAAGAGTCCCCAGGTCTaGTTCTTCTTCACTTTCTGCCCACATATCTCTGGC +
Preference number: 6 (lower is better)
Translates to: KAPLWKSKSPQV*FFFTFCPHISG
Trigger: GCCAGAGATATGTGGGCAGAAAGTGAAGAAGAACAAGACCTGGGGACTCTTGCTCTTCCAAAGTGGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CAA 72 bp AAGGGTCAGGGGTTAGATTCTGGGGTTAGGGTGTGTTaGCATAGTAGTCACATGATCAGGTTGAATGGCCTT +
Preference number: 6 (lower is better)
Translates to: KGQGLDSGVRVC*HSSHMIRLNGL
Trigger: AAGGCCATTCAACCTGATCATGTGACTACTATGCAAACACACCCTAACCCCAGAATCTAACCCCTGACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS CAA 72 bp AGAAGGGAGTCAGATCTGGGATCAGCAGCTGAGTATTaGCAGTTAGGGTCTCTGGGAGTTCAACAATCATGT +
Preference number: 6 (lower is better)
Translates to: RRESDLGSAAEY*QLGSLGVQQSC
Trigger: ACATGATTGTTGAACTCCCAGAGACCCTAACTGCAAATACTCAGCTGCTGATCCCAGATCTGACTCCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527792.5
ENST00000528966.5
ENST00000529764.1
CDS GCA 72 bp AGCCACTGCACTCAGCCTAAACTTTTGTTGGATGAATaGATGTGTATGGGTGAGTTGATGGGGAAGACCAAT +
Preference number: 6 (lower is better)
Translates to: SHCTQPKLLLDE*MCMGELMGKTN
Trigger: ATTGGTCTTCCCCATCAACTCACCCATACACATGCATTCATCCAACAAAAGTTTAGGCTGAGTGCAGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CCA 72 bp GGGCCTCACACAAGTTCAGAACCTGAATTTCCACTTTaGTTTCAAAGTATGTACAGCAGGAAGTCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: GPHTSSEPEFPL*FQSMYSRKSAV
Trigger: CACAGCAGACTTCCTGCTGTACATACTTTGAAACCAAAGTGGAAATTCAGGTTCTGAACTTGTGTGAGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529582.5
CDS TCA 72 bp TATCAGAAGCCCAAATGGAAAGGCCTCAAATGCAATTaGGCTTCCGATACCTTTAGGTCTCATCACGCCTTA +
Preference number: 6 (lower is better)
Translates to: YQKPKWKGLKCN*ASDTFRSHHAL
Trigger: TAAGGCGTGATGAGACCTAAAGGTATCGGAAGCTCAATTGCATTTGAGGCCTTTCCATTTGGGCTTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529582.5
CDS GCA 72 bp GTCTCACCAGTTATTATTTTACAAGAACCTCTCTACTaGACTTGGCTCATCCTCCTCCTTCCCTGGAAATAT +
Preference number: 6 (lower is better)
Translates to: VSPVIILQEPLY*TWLILLLPWKY
Trigger: ATATTTCCAGGGAAGGAGGAGGATGAGCCAAGTGCAGTAGAGAGGTTCTTGTAAAATAATAACTGGTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525443.1
CDS CAA 90 bp ACTCAGCCTAAACTTTTGTTGGATGAATGCATGTGTATGGGTGAGTaGATGGGGAAGACCAATACATTAATATCTGTAAAGAGCTTAACA +
Preference number: 6 (lower is better)
Translates to: TQPKLLLDECMCMGE*MGKTNTLISVKSLT
Trigger: TGTTAAGCTCTTTACAGATATTAATGTATTGGTCTTCCCCATCAACTCACCCATACACATGCATTCATCCAACAAAAGTTTAGGCTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525443.1