RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTB4R2 (Homo sapiens)

Ensembl gene IDs: ENSG00000213906

Ensembl transcript IDs: ENST00000527924.6, ENST00000528054.1, ENST00000530080.1, ENST00000533293.2, ENST00000543919.1, ENST00000642857.1, ENST00000643080.1, ENST00000643638.1, ENST00000644309.2, ENST00000645084.1

Found 341 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAA +
Preference number: 1 (lower is better)
Translates to: TGTITTLIIPQFGGA*ACPKCIVILPSQIQ
Trigger: TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR GCA 90 bp ACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTaGCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTA +
Preference number: 1 (lower is better)
Translates to: TITTLIIPQFGGAWA*PKCIVILPSQIQTL
Trigger: TAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR CCA 90 bp ATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAG +
Preference number: 1 (lower is better)
Translates to: IVLNRDHHHPHNPSV*RSLGLPQVYSNPTQ
Trigger: CTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR TCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR TCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: TTLIIPQFGGAWACPKCINVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR TCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 2 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR CCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 2 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR-3UTR GCA 90 bp CTTAAGTCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCTGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 2 (lower is better)
Translates to: LKSSSNGFPVYFTITAIGWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...GCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGACTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543919.1
ENST00000643080.1
3UTR-3UTR CCA 90 bp CTTAAGTCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAGCAATGCTGGCACATaGGTACATGCCAACTTGCAA +
Preference number: 2 (lower is better)
Translates to: LKSSSNGFPVYFTITAIGSNAGT*VHANLQ
Trigger: TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCT...GCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGACTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543919.1
ENST00000643080.1
3UTR-3UTR GCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 2 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
3UTR CCA 72 bp ATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGC +
Preference number: 3 (lower is better)
Translates to: ITTLIIPQFGGA*ACPKCIVILPS
Trigger: GCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
3UTR CCA 72 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATaGGTACATGCCAACTTGCAAGCACACAATAGTCCT +
Preference number: 3 (lower is better)
Translates to: NSYWQQVSNAGT*VHANLQAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVSASAR*STSVAA
Trigger: GGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGA...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGT +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVPQRAA*AAAPRR
Trigger: ACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGG...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGCCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVPPAEG*LRGRGP
Trigger: GGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGG...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAGGCGCCCCGCAGCCGTaGCAGCGTCACGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQGAPQP*QRHAVA
Trigger: TGCTACAGCGTGACGCTGGCACGGCTGCGGGGCGCC...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTGGACCGGCGACGGGTaGCACAGCTGGCATACGCGG +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVWTGDG*HSWHTR
Trigger: CCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCA...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAGTCTCCTGGTCCGGCTaGGCCCCTGGCCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQVSWSG*APGLLP
Trigger: AGGTAGGAGGCCAGGGGCTCAGCCGGACCAGGAGAC...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGACACCACGAAGCCGTTaGCAGGCAGCCCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVTPRSR*QAAPAA
Trigger: CGCTGCTGGGGCTGCCTGGCAACGGCTTCGTGGTGT...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTTCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSSASAR*STSVAA
Trigger: GGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGA...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGCCCAGCGGCCAGGCCTaGCGGGTCAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVPSGQA*RVRKAT
Trigger: TGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGGG...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTCCCAGCGGCCAGGCCTaGCGGGTCAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSPSGQA*RVRKAT
Trigger: TGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGGG...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGGCGCCCCGCAGCCGTaGCAGCGTCACGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIGAPQP*QRHAVA
Trigger: TGCTACAGCGTGACGCTGGCACGGCTGCGGGGCGCC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIQGPFR*SQRCDR
Trigger: GCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGT +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSPQRAA*AAAPRR
Trigger: ACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGG...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGT +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIPQRAA*AAAPRR
Trigger: ACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAACTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQLRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACACCACGAAGCCGTTaGCAGGCAGCCCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQTPRSR*QAAPAA
Trigger: CGCTGCTGGGGCTGCCTGGCAACGGCTTCGTGGTGT...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCCCAGCGGCCAGGCCTaGCGGGTCAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLPSGQA*RVRKAT
Trigger: TGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGGG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACGTAGTACACCGCCTTaGAGCCCGCCTGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIRSTPP*SPPGPA
Trigger: CGCTGGGCCAGGCGGGCTGCAAGGCGGTGTACTACG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCITARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGGGAAGGCTGTGCCTGTaGCCCGCGAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVGRLCL*PAKSSS
Trigger: GCTGGAAGACTTCGCGGGCCACAGGCACAGCCTTCC...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATATGGACCGGCGACGGGTaGCACAGCTGGCATACGCGG +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIWTGDG*HSWHTR
Trigger: CCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCA...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGCGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTCCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWPPAEG*LRGRGP
Trigger: GGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCILRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTACACCACGAAGCCGTTaGCAGGCAGCCCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSTPRSR*QAAPAA
Trigger: CGCTGCTGGGGCTGCCTGGCAACGGCTTCGTGGTGT...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCGTAGTACACCGCCTTaGAGCCCGCCTGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLRSTPP*SPPGPA
Trigger: CGCTGGGCCAGGCGGGCTGCAAGGCGGTGTACTACG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLTARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTGGCGCCCCGCAGCCGTaGCAGCGTCACGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSGAPQP*QRHAVA
Trigger: TGCTACAGCGTGACGCTGGCACGGCTGCGGGGCGCC...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIRWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTCAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSQGPFR*SQRCDR
Trigger: GCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTG...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGACAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRQGPFR*SQRCDR
Trigger: GCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTG...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGTCTCCTGGTCCGGCTaGGCCCCTGGCCTCCTACCT +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGVSWSG*APGLLP
Trigger: AGGTAGGAGGCCAGGGGCTCAGCCGGACCAGGAGAC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGPPAEG*LRGRGP
Trigger: GGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWLRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTSASAR*STSVAA
Trigger: GGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGA...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCCCAGCGGCCAGGCCTaGCGGGTCAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDPSGQA*RVRKAT
Trigger: TGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGGG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCGTAGTACACCGCCTTaGAGCCCGCCTGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGRSTPP*SPPGPA
Trigger: CGCTGGGCCAGGCGGGCTGCAAGGCGGTGTACTACG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSTARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAACAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGA +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQQCLVP*GTVADR
Trigger: TCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTG...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGGAAGGCTGTGCCTGTaGCCCGCGAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIGRLCL*PAKSSS
Trigger: GCTGGAAGACTTCGCGGGCCACAGGCACAGCCTTCC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTQGPFR*SQRCDR
Trigger: GCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGT +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDPQRAA*AAAPRR
Trigger: ACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGAGGCGTCCAGGCATGTaGGAGCCTGCCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWRRPGM*EPALPG
Trigger: TCCTGGCAAGGCAGGCTCTCACATGCCTGGACGCCT...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGTCTGCCTGGGAGTCCTaGCTTCCACGAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVSAWES*LPRGPR
Trigger: TCTGGGTCCTCGTGGAAGTCAGGACTCCCAGGCAGA...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACCTGTGATGCCCGATaGGAAGGTGCCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQTCDAR*EGAMPP
Trigger: AGGAGGCATGGCACCTTCTCATCGGGCATCACAGGT...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTCCCACCACTTTCAGCTaGGGGGTAGTTCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSPTTFS*GVVRSS
Trigger: GGAGCTCCGAACTACCCCTCAGCTGAAAGTGGTGGG...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACCACGAAGCCGTTaGCAGGCAGCCCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRTPRSR*QAAPAA
Trigger: CGCTGCTGGGGCTGCCTGGCAACGGCTTCGTGGTGT...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTACACCACGAAGCCGTTaGCAGGCAGCCCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSTPRSR*QAAPAA
Trigger: CGCTGCTGGGGCTGCCTGGCAACGGCTTCGTGGTGT...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQSASAR*STSVAA
Trigger: GGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGA...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTTARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGGCGCCCCGCAGCCGTaGCAGCGTCACGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQGAPQP*QRHAVA
Trigger: TGCTACAGCGTGACGCTGGCACGGCTGCGGGGCGCC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCILQKVD*VVGGPE
Trigger: CTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGACGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRRWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTCGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSRWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGA +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSQCLVP*GTVADR
Trigger: TCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTG...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTGGTGCAGCACAAGCGTaGCCGCCAGCGGTCGCCCCC +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVGAAQA*PPAVAP
Trigger: GGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACC...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTTTCTGGGCCTACAGGTaGGTGGAAGGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSFWAYR*VEGATE
Trigger: CTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAA...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTGGACCGGCGACGGGTaGCACAGCTGGCATACGCGG +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTWTGDG*HSWHTR
Trigger: CCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCA...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQQGPFR*SQRCDR
Trigger: GCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACCAGGAAGGGGCGGGTaGCTGCGAGGCAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQPGRGG*LRGSAA
Trigger: TGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGG...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGACCTGTGATGCCCGATaGGAAGGTGCCATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVTCDAR*EGAMPP
Trigger: AGGAGGCATGGCACCTTCTCATCGGGCATCACAGGT...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCACCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAPPAEG*LRGRGP
Trigger: GGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGG...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTLRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCCCACCACTTTCAGCTaGGGGGTAGTTCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWPTTFS*GVVRSS
Trigger: GGAGCTCCGAACTACCCCTCAGCTGAAAGTGGTGGG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCCCAGCGGCCAGGCCTaGCGGGTCAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVPSGQA*RVRKAT
Trigger: TGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGGG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACGTAGTACACCGCCTTaGAGCCCGCCTGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQRSTPP*SPPGPA
Trigger: CGCTGGGCCAGGCGGGCTGCAAGGCGGTGTACTACG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLATARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWLQKVD*VVGGPE
Trigger: CTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLLQKVD*VVGGPE
Trigger: CTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDRWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTTGCCTGGTCTCTCTaGCCTGCAGAGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIVAWSL*PAEVTQ
Trigger: TTGGGTCACCTCTGCAGGCCAGAGAGACCAGGCAAC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGAGTGTGTATGTTGCCTaGTCTCTCTGGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVSVYVA*SLWPAE
Trigger: CTCTGCAGGCCAGAGAGACCAGGCAACATACACACT...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATGGACCGGCGACGGGTaGCACAGCTGGCATACGCGG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQWTGDG*HSWHTR
Trigger: CCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCA...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAACAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATACATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGT +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSPQRAA*AAAPRR
Trigger: ACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGG...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGCAAAACCCCACCTGTaGTGCCCGATGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLAKPHL*CPMRRC
Trigger: GCACCTTCTCATCGGGCATCACAGGTGGGGTTTTGC...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLPPAEG*LRGRGP
Trigger: GGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACGTAGTACACCGCCTTaGAGCCCGCCTGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQRSTPP*SPPGPA
Trigger: CGCTGGGCCAGGCGGGCTGCAAGGCGGTGTACTACG...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTACTGCGAGGCAGCGCTaGAGGCTGAGCAGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSTARQR*RLSRPV
Trigger: CACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGT...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLEGAGD*EAALQA
Trigger: AGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTC...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGGAACCCAGATCCCCTaGTCCCAGTCAGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWGTQIP*SQSVDL
Trigger: CAGGTCAACTGACTGGGAGCAGGGGATCTGGGTTCC...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCACGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLARWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGGAAGGCTGTGCCTGTaGCCCGCGAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHGRLCL*PAKSSS
Trigger: GCTGGAAGACTTCGCGGGCCACAGGCACAGCCTTCC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAACTGGGCAAAACTGGATaGTGGGGTGTAAAGGGACGT +
Preference number: 4 (lower is better)
Translates to: GGAWACPKCIVILPSQIQLGKTG*WGVKGR
Trigger: ACGTCCCTTTACACCCCACCATCCAGTTTTGCCCAG...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGATTCTGGGCCTACAGGTaGGTGGAAGGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRFWAYR*VEGATE
Trigger: CTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAA...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACGGGTGGCACAGCTaGCATACGCGGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRDGWHS*HTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTC...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAATGGACCGGCGACGGGTaGCACAGCTGGCATACGCGG +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQWTGDG*HSWHTR
Trigger: CCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCA...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQLRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCACCACTTTCAGCTaGGGGGTAGTTCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILPTTFS*GVVRSS
Trigger: GGAGCTCCGAACTACCCCTCAGCTGAAAGTGGTGGG...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAGGAACCCAGATCCCCTaGTCCCAGTCAGTTGACCTG +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRGTQIP*SQSVDL
Trigger: CAGGTCAACTGACTGGGAGCAGGGGATCTGGGTTCC...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHLQKVD*VVGGPE
Trigger: CTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCGGTGGAGCCAGCGCTaGGACCGCCTGCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLRWSQR*DRLQKV
Trigger: AACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGA +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTQCLVP*GTVADR
Trigger: TCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAGAACTTGAGGTTGCTTaGGGAGGGCACCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRELEVA*GGHQEH
Trigger: GTGCTCCTGGTGCCCTCCCCAAGCAACCTCAAGTTC...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGTTGCCTGGTCTCTCTaGCCTGCAGAGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGVAWSL*PAEVTQ
Trigger: TTGGGTCACCTCTGCAGGCCAGAGAGACCAGGCAAC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGAGTGTGTATGTTGCCTaGTCTCTCTGGCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVSVYVA*SLWPAE
Trigger: CTCTGCAGGCCAGAGAGACCAGGCAACATACACACT...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGACCACTCCTCTAGTCTaGCCCCTCCTTCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVTTPLV*PLLLCP
Trigger: TGGACAAAGAAGGAGGGGCCAGACTAGAGGAGTGGT...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVRRQAR*RSPAGP
Trigger: TGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCATGACACACAACCATaGAGAGGCCCCATTACCAGG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLHDTQP*RGPITR
Trigger: CCTGGTAATGGGGCCTCTTCATGGTTGTGTGTCATG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTGGAAACAGCACAAGCTaGAGTGGGGCAGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSGNSTS*SGAVRF
Trigger: GAATCTTACTGCCCCACTTCAGCTTGTGCTGTTTCC...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCATCTGCCTGGGAGTCCTaGCTTCCACGAGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLASAWES*LPRGPR
Trigger: TCTGGGTCCTCGTGGAAGTCAGGACTCCCAGGCAGA...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACCCACCACTTTCAGCTaGGGGGTAGTTCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQPTTFS*GVVRSS
Trigger: GGAGCTCCGAACTACCCCTCAGCTGAAAGTGGTGGG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTAAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGACTCAGTCCCCCACCTaGCTTATCCTTGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLTQSPT*LILACF
Trigger: GAAACAGGCAAGGATAAGGCAGGTGGGGGACTGAGT...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCTGCAGTGTGTATGTTaGCTGGTCTCTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGLQCVC*LVSLAC
Trigger: GCAGGCCAGAGAGACCAGGCAACATACACACTGCAG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGAGGCATGTGAGAGCCTaGCTTGCCAGGAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGRHVRA*LARKQH
Trigger: GTGCTGTTTCCTGGCAAGGCAGGCTCTCACATGCCT...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAAGCGCTGCGACCGCCTaGAGAAGGTTGACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQSAATA*RRLTAW
Trigger: CCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCT...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTGGAAGGCTGTGCCTGTaGCCCGCGAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSGRLCL*PAKSSS
Trigger: GCTGGAAGACTTCGCGGGCCACAGGCACAGCCTTCC...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGGGAAGGCTGTGCCTGTaGCCCGCGAAGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLGRLCL*PAKSSS
Trigger: GCTGGAAGACTTCGCGGGCCACAGGCACAGCCTTCC...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCGAACTTGAGGTTGCTTaGGGAGGGCACCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTELEVA*GGHQEH
Trigger: GTGCTCCTGGTGCCCTCCCCAAGCAACCTCAAGTTC...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATTCTGGGCCTACAGGTaGGTGGAAGGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQFWAYR*VEGATE
Trigger: CTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAA...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCATTCTGGGCCTACAGGTaGGTGGAAGGCGCCACAGAG +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAFWAYR*VEGATE
Trigger: CTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAA...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGACAAGTAAGCAATGCTaGCACATGGGTACATGCCAA +
Preference number: 4 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVTSKQC*HMGTCQ
Trigger: TTGGCATGTACCCATGTGCCAGCATTGCTTACTTGT...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCGCTGGCGTACATGCTaGGCGCGCACACGTAGTACA +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSRWRTC*ARTRST
Trigger: TGTACTACGTGTGCGCGCTCAGCATGTACGCCAGCG...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGTAACAGCCAGAACTTaGGGTTGCTTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHVTART*GCLGRA
Trigger: TGCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTAC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCATGACACACAACCATaGAGAGGCCCCATTACCAGG +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGHDTQP*RGPITR
Trigger: CCTGGTAATGGGGCCTCTTCATGGTTGTGTGTCATG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGATGGTTAGGGAGTCATaGCACACAACCATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVMVRES*HTTMKR
Trigger: CCTCTTCATGGTTGTGTGTCATGACTCCCTAACCAT...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGCAAAACCCCACCTGTaGTGCCCGATGAGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQAKPHL*CPMRRC
Trigger: GCACCTTCTCATCGGGCATCACAGGTGGGGTTTTGC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTGCAGATCTCCAGCGGTaGAGACGTAGAGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVADLQR*RRRAPG
Trigger: ACCCGGTGCTCTACGTCTTCACCGCTGGAGATCTGC...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCCCACCACTTTCAGCTaGGGGGTAGTTCGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVPTTFS*GVVRSS
Trigger: GGAGCTCCGAACTACCCCTCAGCTGAAAGTGGTGGG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGCCCCATTACCAGGCTaGACCAGGATACAAGACAAG +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGAPLPG*TRIQDK
Trigger: CTTGTCTTGTATCCTGGTGCAGCCTGGTAATGGGGC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCTGGTCTCTCTGGCCTaGAGAGGTGACCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHLVSLA*RGDPNN
Trigger: GTTGTTTGGGTCACCTCTGCAGGCCAGAGAGACCAG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACTGGTCTCTCTGGCCTaGAGAGGTGACCCAAACAAC +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILLVSLA*RGDPNN
Trigger: GTTGTTTGGGTCACCTCTGCAGGCCAGAGAGACCAG...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAGCTGAATCCTGGTCCTaGTTCTGTTCTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRAESWS*FCSHPS
Trigger: GGAGGGATGAGAACAGAAGCAGGACCAGGATTCAGC...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGATGTGAGAGCCTGCCTTaGCAGGAAACAGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRCESLP*QETAQA
Trigger: AGCTTGTGCTGTTTCCTGGCAAGGCAGGCTCTCACA...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTGGGTGTAAAGGGACGTaGACAGATCTACTTACCAAG +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSGCKGT*TDLLTK
Trigger: CTTGGTAAGTAGATCTGTGCACGTCCCTTTACACCC...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTCCTCCTTACTTCCCTaGAGCCTGCCTCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGSSLLP*SLPLFC
Trigger: GCAGAAAAGAGGCAGGCTGCAGGGAAGTAAGGAGGA...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGGGCGCCCCGCAGCCGTaGCAGCGTCACGCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKGAPQP*QRHAVA
Trigger: TGCTACAGCGTGACGCTGGCACGGCTGCGGGGCGCC...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLLQKVD*VVGGPE
Trigger: CTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATATGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGTGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGTGGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: SQRRVPKCPRTLTSGGWVATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...CACCCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGA +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSQCLVP*GTVADR
Trigger: TCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTG...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAACAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGA +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQQCLVP*GTVADR
Trigger: TCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTG...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGGCAGTAAGATTCCCTaGTGGTGGAAGGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIGSKIP*WWKEIG
Trigger: TCCTATTTCCTTCCACCACCAGGGAATCTTACTGCC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGACAGCACAAGCTGAAGTaGGGCAGTAAGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRQHKLK*GSKIPW
Trigger: CCAGGGAATCTTACTGCCCCACTTCAGCTTGTGCTG...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTGGCAAAACTGGATGGTaGGGTGTAAAGGGACGTGCA +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSGKTGW*GVKGRA
Trigger: TGCACGTCCCTTTACACCCCACCATCCAGTTTTGCC...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGGCAAAACTGGATGGTaGGGTGTAAAGGGACGTGCA +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGGKTGW*GVKGRA
Trigger: TGCACGTCCCTTTACACCCCACCATCCAGTTTTGCC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGACATCTGGGCAAAACTaGATGGTGGGGTGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLTSGQN*MVGCKG
Trigger: CCCTTTACACCCCACCATCCAGTTTTGCCCAGATGT...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCAGTTTGGAGGAGCCTaGGCCTGCCCCAAGTGTATA +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTQFGGA*ACPKCI
Trigger: TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAGCAATGCTGGCACATaGGTACATGCCAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: HPHNPSVWRSLGLPQVYSSNAGT*VHANLQ
Trigger: TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCT...ACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGCCTCACAACAGACAGTaGGAGAGAGTTGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWPHNRQ*ERVVLP
Trigger: AGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGG...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGTAACAGCCAGAACTTaGGGTTGCTTGGGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQVTART*GCLGRA
Trigger: TGCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTAC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGATCACCGGGCTGTCAATaGCAGCTTTTCCATGTAAGG +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRSPGCQ*QLFHVR
Trigger: CCTTACATGGAAAAGCTGTCATTGACAGCCCGGTGA...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAAATGTCCCAGAACACTaGCCTCTGGAGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQNVPEH*PLEGGW
Trigger: CCACCCACCCTCCAGAGGTCAGTGTTCTGGGACATT...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCACCTGCCTTATCCTTaGCTGTTTCCAGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTHLPYP*LFPVSW
Trigger: CCAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTAACTCAGTCCCCCACCTaGCTTATCCTTGCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILTQSPT*LILACF
Trigger: GAAACAGGCAAGGATAAGGCAGGTGGGGGACTGAGT...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCACTGCAGTGTGTATGTTaGCTGGTCTCTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLALQCVC*LVSLAC
Trigger: GCAGGCCAGAGAGACCAGGCAACATACACACTGCAG...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACTCCTCCTTACTTCCCTaGAGCCTGCCTCTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDSSLLP*SLPLFC
Trigger: GCAGAAAAGAGGCAGGCTGCAGGGAAGTAAGGAGGA...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp ACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: TTLIIPQFGGAWACPKCIGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...TATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp GTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGCCCTTCAGTAGGCCTTaGGAACCTCTGAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: VLNRDHHHPHNPSVWRSLPFSRP*EPLRKV
Trigger: TACTTTTCTCAGAGGTTCCCAAGGCCTACTGAAGGG...CAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGAAGATTCCCTGGTGGTaGAAGGAAATAGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWKIPWW*KEIGGL
Trigger: GAGTCCTCCTATTTCCTTCCACCACCAGGGAATCTT...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTAACCACTCCTCTAGTCTaGCCCCTCCTTCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IIPQFGGAWACPKCIVILTTPLV*PLLLCP
Trigger: TGGACAAAGAAGGAGGGGCCAGACTAGAGGAGTGGT...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCATAATCCCTCAGTTTaGAGGAGCCTGGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVHNPSV*RSLGLP
Trigger: GGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGCTTCGAAGAGCCGCGTaGGGAAACGGGGACCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKLRRAA*GNGDLP
Trigger: GGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAG...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACACCTGCCTTATCCTTaGCTGTTTCCAGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQHLPYP*LFPVSW
Trigger: CCAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCATGCCCGATGAGAAGGTaGCATGCCTCCTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLACPMRR*HASSLL
Trigger: AAGTAAGGAGGAGGCATGGCACCTTCTCATCGGGCA...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAGGCAGTAAGATTCCCTaGTGGTGGAAGGAAATAGGA +
Preference number: 4 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRGSKIP*WWKEIG
Trigger: TCCTATTTCCTTCCACCACCAGGGAATCTTACTGCC...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGCAGCACAAGCTGAAGTaGGGCAGTAAGATTCCCTGG +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRQHKLK*GSKIPW
Trigger: CCAGGGAATCTTACTGCCCCACTTCAGCTTGTGCTG...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAACTGGGCAAAACTGGATaGTGGGGTGTAAAGGGACGT +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQLGKTG*WGVKGR
Trigger: ACGTCCCTTTACACCCCACCATCCAGTTTTGCCCAG...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTAAAACCCCACCAAGCTaGGAGCAAGCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVKTPPS*EQAGLG
Trigger: CCCCAATCCTGCTTGCTCCCAGCTTGGTGGGGTTTT...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543919.1
ENST00000643080.1
CDS-3UTR TCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGAGGCGTCCAGGCATGTaGGAGCCTGCCTTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKRRPGM*EPALPG
Trigger: TCCTGGCAAGGCAGGCTCTCACATGCCTGGACGCCT...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTGCTGAATCCTGGTCCTaGTTCTGTTCTCATCCCTCC +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVAESWS*FCSHPS
Trigger: GGAGGGATGAGAACAGAAGCAGGACCAGGATTCAGC...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGCCCGATGAGAAGGTaGCATGCCTCCTCCTTACTT +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVCPMRR*HASSLL
Trigger: AAGTAAGGAGGAGGCATGGCACCTTCTCATCGGGCA...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGGCAGCCCTCTCCTCTTaGAAAAGTCAAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGAALSS*KSQAKL
Trigger: AAGTTTTGCTTGACTTTTCCAAGAGGAGAGGGCTGC...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCAAGATTCCCTGGTGGTaGAAGGAAATAGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTKIPWW*KEIGGL
Trigger: GAGTCCTCCTATTTCCTTCCACCACCAGGGAATCTT...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGATCTACTTACCAAGCTaGGAGCAAGCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRIYLPS*EQAGLG
Trigger: CCCCAATCCTGCTTGCTCCCAGCTTGGTAAGTAGAT...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAATCTACTTACCAAGCTaGGAGCAAGCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQIYLPS*EQAGLG
Trigger: CCCCAATCCTGCTTGCTCCCAGCTTGGTAAGTAGAT...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAATCACCGGGCTGTCAATaGCAGCTTTTCCATGTAAGG +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQSPGCQ*QLFHVR
Trigger: CCTTACATGGAAAAGCTGTCATTGACAGCCCGGTGA...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCATGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAGTAAGATTCCCTGGTaGTGGAAGGAAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHSKIPW*WKEIGG
Trigger: TCCTCCTATTTCCTTCCACCACCAGGGAATCTTACT...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCAATGCTGGCACATaGGTACATGCCAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLASNAGT*VHANLQ
Trigger: TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCT...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACACAAGTAAGCAATGCTaGCACATGGGTACATGCCAA +
Preference number: 4 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDTSKQC*HMGTCQ
Trigger: TTGGCATGTACCCATGTGCCAGCATTGCTTACTTGT...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR TCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCCTCACAACAGACAGTaGGAGAGAGTTGTTCTACCT +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLPHNRQ*ERVVLP
Trigger: AGGTAGAACAACTCTCTCTCACTGTCTGTTGTGAGG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTATGGTTAGGGAGTCATaGCACACAACCATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVMVRES*HTTMKR
Trigger: CCTCTTCATGGTTGTGTGTCATGACTCCCTAACCAT...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAGAAAAGAAAGGCCTCTaGTCAAGTAACAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAEKKGL*SSNSQN
Trigger: GTTCTGGCTGTTACTTGAGCAGAGGCCTTTCTTTTC...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTTGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTTGGCACATGGGTACATaGCAACTTGCAAGCACACAA +
Preference number: 4 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVWHMGT*QLASTQ
Trigger: TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCA...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTGCAACAAGTAAGCAATaGTGGCACATGGGTACATGC +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSATSKQ*WHMGTC
Trigger: GCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCCCTTCAGTAGGCCTTaGGAACCTCTGAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLPFSRP*EPLRKV
Trigger: TACTTTTCTCAGAGGTTCCCAAGGCCTACTGAAGGG...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGAGCACTGTCTTAGTTTaGGTTCTTCCAAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRSTVLV*VLPKQS
Trigger: GCTCTGCTTTGGAAGAACCCAAACTAAGACAGTGCT...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAGCAGCCCTCTCCTCTTaGAAAAGTCAAGCAAAACTT +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQAALSS*KSQAKL
Trigger: AAGTTTTGCTTGACTTTTCCAAGAGGAGAGGGCTGC...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAAGTAAGATTCCCTGGTaGTGGAAGGAAATAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQSKIPW*WKEIGG
Trigger: TCCTCCTATTTCCTTCCACCACCAGGGAATCTTACT...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp GCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAAACAAGTAAGCAATGCTaGCACATGGGTACATGCCAA +
Preference number: 4 (lower is better)
Translates to: ATSKQCWHMGTCQLASTQTSKQC*HMGTCQ
Trigger: TTGGCATGTACCCATGTGCCAGCATTGCTTACTTGT...TTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTGAAAAGAAAGGCCTCTaGTCAAGTAACAGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSEKKGL*SSNSQN
Trigger: GTTCTGGCTGTTACTTGAGCAGAGGCCTTTCTTTTC...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR GCA 90 bp CAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTGGGTACATGCCAACTTaGAAGCACACAATAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QVSNAGTWVHANLQAHNSGYMPT*KHTIVL
Trigger: AAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCC...ACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGACAAGTAAGCAATGCTaGCACATGGGTACATGCCAA +
Preference number: 4 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLTSKQC*HMGTCQ
Trigger: TTGGCATGTACCCATGTGCCAGCATTGCTTACTTGT...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAACAAGTAAGCAATGCTaGCACATGGGTACATGCCAA +
Preference number: 4 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQTSKQC*HMGTCQ
Trigger: TTGGCATGTACCCATGTGCCAGCATTGCTTACTTGT...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CCA 90 bp CTTAAGTCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAAAACCCCACCAAGCTaGGAGCAAGCAGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: LKSSSNGFPVYFTITAIGKTPPS*EQAGLG
Trigger: CCCCAATCCTGCTTGCTCCCAGCTTGGTGGGGTTTT...GCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGACTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543919.1
ENST00000643080.1
CDS-3UTR GCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGTGTGAGAGCCTGCCTTaGCAGGAAACAGCACAAGCT +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKCESLP*QETAQA
Trigger: AGCTTGTGCTGTTTCCTGGCAAGGCAGGCTCTCACA...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR TCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGGGAAACAGCACAAGCTaGAGTGGGGCAGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKGNSTS*SGAVRF
Trigger: GAATCTTACTGCCCCACTTCAGCTTGTGCTGTTTCC...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR GCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGCCTACTCCTGTCCTGTaGCTATCACATTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKPTPVL*LSHLQR
Trigger: CCTCTGCAAATGTGATAGGCACAGGACAGGAGTAGG...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR GCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGGGGTGTAAAGGGACGTaGACAGATCTACTTACCAAG +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKGCKGT*TDLLTK
Trigger: CTTGGTAAGTAGATCTGTGCACGTCCCTTTACACCC...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGAGCAATGCTGGCACATaGGTACATGCCAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKSNAGT*VHANLQ
Trigger: TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCT...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000543919.1
ENST00000643080.1
ENST00000645084.1
CDS-3UTR CCA 90 bp TCATCATCTAATGGCTTCCCAGTGTATTTCACAATAACAGCTATTGGCAACAAGAGCACTGTCTTAGTTTaGGTTCTTCCAAAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SSSNGFPVYFTITAIGNKSTVLV*VLPKQS
Trigger: GCTCTGCTTTGGAAGAACCCAAACTAAGACAGTGCT...CTTGTTGCCAATAGCTGTTATTGTGAAATACACTGGGAAGCCATTAGATGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS GCA 90 bp AAGAGCGGCGTGAGCAGCAGCACCGCGCCGTCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCCAGCGGTCGCCCCCGTGCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: KSGVSSSTAPSASAR*STSVAASGRPRAGR
Trigger: GCGGCCTGCACGGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGACGGCGCGGTGCTGCTGCTCACGCCGCTCTT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000527924.6
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000642857.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS GCA 90 bp CAGGGCCGGGCTGCGCAGCCGAGGCGCCAGGAAGGGGCGGGTGACTaGGAGGCAGCGCTGCAGGCTGAGCAGGCCGGTGAGCAGCACGCT +
Preference number: 5 (lower is better)
Translates to: QGRAAQPRRQEGAGD*EAALQAEQAGEQHA
Trigger: AGCGTGCTGCTCACCGGCCTGCTCAGCCTGCAGCGCTGCCTCGCAGTCACCCGCCCCTTCCTGGCGCCTCGGCTGCGCAGCCCGGCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000527924.6
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000642857.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS TCA 90 bp CCAGCGGCCAGGCCTGCCGGGTCAGGAAGGCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGTCGGCCAGCGCCAGGTGCAGCACAA +
Preference number: 5 (lower is better)
Translates to: PAARPAGSGRPQRAA*AAAPRRRPAPGAAQ
Trigger: TTGTGCTGCACCTGGCGCTGGCCGACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGGCCTTCCTGACCCGGCAGGCCTGGCCGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000527924.6
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000642857.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 90 bp CGCCGCCTGGCCGGCTCCGCCCAGCTTCGCCAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTGACTGCGTGGTA +
Preference number: 5 (lower is better)
Translates to: RRLAGSAQLRQGPFR*SQRCDRLQKVDCVV
Trigger: TACCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTGGCGAAGCTGGGCGGAGCCGGCCAGGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 90 bp AGCACGAAAGCGGTCAGAGTCTCCAGGCTCAGGTGGGCGGCGGCGTaGACCGGCGACGGGTGGCACAGCTGGCATACGCGGTCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: STKAVRVSRLRWAAA*TGDGWHSWHTRSLH
Trigger: GTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCACGCCGCCGCCCACCTGAGCCTGGAGACTCTGACCGCTTTCGTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 90 bp CTAGAACTGAAGAAGGCCAAGGCCGTAGTTCCCGCTCGCGCCGCCTaGCCGGCTCCGCCCAGCTTCGCCAAGGCCCCTTCCGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: LELKKAKAVVPARAA*PAPPSFAKAPSGGA
Trigger: GGCTCCACCGGAAGGGGCCTTGGCGAAGCTGGGCGGAGCCGGCCAGGCGGCGCGAGCGGGAACTACGGCCTTGGCCTTCTTCAGTTCTAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS TCA 90 bp AGGCCCCTTCCGGTGGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCCAGAGCAAGCCGAAGGCAAGCACGA +
Preference number: 5 (lower is better)
Translates to: RPLPVEPALRPPAEG*LRGRGPRASRRQAR
Trigger: TCGTGCTTGCCTTCGGCTTGCTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS GCA 90 bp CCCTTCCGGTGGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAGCAAGCCGAAGGCAAGCACGATGGC +
Preference number: 5 (lower is better)
Translates to: PFRWSQRCDRLQKVD*VVGGPEQAEGKHDG
Trigger: GCCATCGTGCTTGCCTTCGGCTTGCTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCGGAAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 90 bp AGCCCGAAAGGAAGCACGAAAGCGGTCAGAGTCTCCAGGCTCAGGTaGGCGGCGGCGTGGACCGGCGACGGGTGGCACAGCTGGCATACG +
Preference number: 5 (lower is better)
Translates to: SPKGSTKAVRVSRLR*AAAWTGDGWHSWHT
Trigger: CGTATGCCAGCTGTGCCACCCGTCGCCGGTCCACGCCGCCGCCCACCTGAGCCTGGAGACTCTGACCGCTTTCGTGCTTCCTTTCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 90 bp GCCTGTGGCCCGCGAAGTCTTCCAGCTCAGCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGACATCCTTCTGGGCCAAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: ACGPRSLPAQQCLVP*GTVADRHPSGPSWE
Trigger: CTCCCAGCTTGGCCCAGAAGGATGTCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTGCTGAGCTGGAAGACTTCGCGGGCCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527924.6
ENST00000533293.2
ENST00000642857.1
ENST00000644309.2
CDS CCA 90 bp GCCTGTGGCCCGCGAAGTCTTCCAGCTCAGCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGACATCCTTCTGGGCCTACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: ACGPRSLPAQQCLVP*GTVADRHPSGPTGG
Trigger: CCCACCTGTAGGCCCAGAAGGATGTCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTGCTGAGCTGGAAGACTTCGCGGGCCACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000645084.1
CDS GCA 90 bp TCTCTCTGGCCTGCAGAGGTGACCCAAACAACTCAGTCCCCCACCTaGCTTATCCTTGCCTGTTTCCAGTCTCCTGGTCCGGCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: SLWPAEVTQTTQSPT*LILACFQSPGPAEP
Trigger: GGGCTCAGCCGGACCAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTGGGGGACTGAGTTGTTTGGGTCACCTCTGCAGGCCAGAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGAGCCAGAACTTGAGGTaGCTTGGGGAGGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVSQNLR*LGEGTR
Trigger: CCTGGTGCCCTCCCCAAGCAACCTCAAGTTCTGGCT...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 90 bp TCCTCCCAGCCCACCTTCTGCAGTGTGTATGTTGCCTGGTCTCTCTaGCCTGCAGAGGTGACCCAAACAACTCAGTCCCCCACCTGCCTT +
Preference number: 5 (lower is better)
Translates to: SSQPTFCSVYVAWSL*PAEVTQTTQSPTCL
Trigger: AAGGCAGGTGGGGGACTGAGTTGTTTGGGTCACCTCTGCAGGCCAGAGAGACCAGGCAACATACACACTGCAGAAGGTGGGCTGGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS TCA 90 bp CCTGCCCCAGTCACTCCACCCTCAGGGCTCTCACCGGGCTGTCAATaGCAGCTTTTCCATGTAAGGCATGGTGCTAGGTTCCAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: PAPVTPPSGLSPGCQ*QLFHVRHGARFQEE
Trigger: TTCCTCCTGGAACCTAGCACCATGCCTTACATGGAAAAGCTGTCATTGACAGCCCGGTGAGAGCCCTGAGGGTGGAGTGACTGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS GCA 90 bp CCTTCCCATCACCAACGCACCCAGGCGTCCAGGCATGTGAGAGCCTaGCTTGCCAGGAAACAGCACAAGCTGAAGTGGGGCAGTAAGATT +
Preference number: 5 (lower is better)
Translates to: PSHHQRTQASRHVRA*LARKQHKLKWGSKI
Trigger: AATCTTACTGCCCCACTTCAGCTTGTGCTGTTTCCTGGCAAGGCAGGCTCTCACATGCCTGGACGCCTGGGTGCGTTGGTGATGGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp GGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAAGTAACAGCCAGAACTaGAGGTTGCTTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GGAWACPKCIVILPSQIQSNSQN*RLLGEG
Trigger: GCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTACT...TTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp ATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTATAGTAATCCTACCTGCTCCCAGTCAGTaGACCTGCCCCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: IIPQFGGAWACPKCIVILPAPSQ*TCPTPG
Trigger: GCCAGGAGTGGGGCAGGTCAACTGACTGGGAGCAGG...TAGGATTACTATACACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS TCA 90 bp CCTTCTGCAGTGTGTATGTTGCCTGGTCTCTCTGGCCTGCAGAGGTaGCCCAAACAACTCAGTCCCCCACCTGCCTTATCCTTGCCTGTT +
Preference number: 5 (lower is better)
Translates to: PSAVCMLPGLSGLQR*PKQLSPPPALSLPV
Trigger: AACAGGCAAGGATAAGGCAGGTGGGGGACTGAGTTGTTTGGGTCACCTCTGCAGGCCAGAGAGACCAGGCAACATACACACTGCAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp ATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGCCTGCTCCCAGTCAGTaGACCTGCCCCACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: MLAHGYMPTCKHTIVLNRPAPSQ*TCPTPG
Trigger: GCCAGGAGTGGGGCAGGTCAACTGACTGGGAGCAGG...CCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS TCA 90 bp CAGGAGGAACAGGGGATGCATGGAGGCATAATGGTTAGGGAGTCATaGCACACAACCATGAAGAGGCCCCATTACCAGGCTGCACCAGGA +
Preference number: 5 (lower is better)
Translates to: QEEQGMHGGIMVRES*HTTMKRPHYQAAPG
Trigger: TCCTGGTGCAGCCTGGTAATGGGGCCTCTTCATGGTTGTGTGTCATGACTCCCTAACCATTATGCCTCCATGCATCCCCTGTTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 90 bp AGGCATGTGAGAGCCTGCCTTGCCAGGAAACAGCACAAGCTGAAGTaGGGCAGTAAGATTCCCTGGTGGTGGAAGGAAATAGGAGGACTC +
Preference number: 5 (lower is better)
Translates to: RHVRACLARKQHKLK*GSKIPWWWKEIGGL
Trigger: GAGTCCTCCTATTTCCTTCCACCACCAGGGAATCTTACTGCCCCACTTCAGCTTGTGCTGTTTCCTGGCAAGGCAGGCTCTCACATGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGTGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACGAGGGTTCAAGGTATTaGGTTCAGGGCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDEGSRY*VQGQGQ
Trigger: CTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTC...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGAGTAACAGCCAGAACTaGAGGTTGCTTGGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGSNSQN*RLLGEG
Trigger: GCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTACT...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTCCACCTGCCTTATCCTaGCCTGTTTCCAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSPPALS*PVSSLL
Trigger: CAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTGG...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTTCTGCAGTGTGTATGTaGCCTGGTCTCTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSSAVCM*PGLSGL
Trigger: CAGGCCAGAGAGACCAGGCAACATACACACTGCAGA...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CATCACCACCCTCATAATCCCTCAGTTTGGAGGAGCCTGGGCCTGCCCCAAGTGCTGTGCCTATCACATTaGCAGAGGGTAAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: HHHPHNPSVWRSLGLPQVLCLSH*QRVRQE
Trigger: TTCTTGTCTTACCCTCTGCAAATGTGATAGGCACAG...CACTTGGGGCAGGCCCAGGCTCCTCCAAACTGAGGGATTATGAGGGTGGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACCTGGCCCCTCCTTCTTaGTCCAGCCCCATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHLAPPS*SSPILA
Trigger: TGCTAGAATGGGGCTGGACAAAGAAGGAGGGGCCAG...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACCTGGCCCCTCCTTCTTaGTCCAGCCCCATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDLAPPS*SSPILA
Trigger: TGCTAGAATGGGGCTGGACAAAGAAGGAGGGGCCAG...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 90 bp TCTTTGTCCAGCCCCATTCTAGCACATCTGGGCAAAACTGGATGGTaGGGTGTAAAGGGACGTGCACAGATCTACTTACCAAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLSSPILAHLGKTGW*GVKGRAQIYLPSWE
Trigger: CTCCCAGCTTGGTAAGTAGATCTGTGCACGTCCCTTTACACCCCACCATCCAGTTTTGCCCAGATGTGCTAGAATGGGGCTGGACAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGCACATGGGTACATGCCAACTTGCAAGCACACAATAGTCCTTAACAGGGACTCTGCAGTGTGTATGTaGCCTGGTCTCTCTGGCCTG +
Preference number: 5 (lower is better)
Translates to: LAHGYMPTCKHTIVLNRDSAVCM*PGLSGL
Trigger: CAGGCCAGAGAGACCAGGCAACATACACACTGCAGA...GTCCCTGTTAAGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGAGGGTTCAAGGTATTaGGTTCAGGGCCAGGGCCAG +
Preference number: 5 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQEGSRY*VQGQGQ
Trigger: CTGGCCCTGGCCCTGAACCAAATACCTTGAACCCTC...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp TCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGTGGAGCAGCCCTCTCCTCTaGGAAAAGTCAAGCAAAACT +
Preference number: 5 (lower is better)
Translates to: SSQRRVPKCPRTLTSGGWSSPLL*EKSSKT
Trigger: AGTTTTGCTTGACTTTTCCAAGAGGAGAGGGCTGCT...CCACCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCACCACCTGCCTTATCCTaGCCTGTTTCCAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QLLATSKQCWHMGTCQLAPPALS*PVSSLL
Trigger: CAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTGG...TGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGAGCAGCCCTCTCCTCTaGGAAAAGTCAAGCAAAACT +
Preference number: 5 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGSSPLL*EKSSKT
Trigger: AGTTTTGCTTGACTTTTCCAAGAGGAGAGGGCTGCT...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp CTGGGCCTGCCCCAAGTGTATAGTAATCCTACCCAGCCAGATCCAAACTCTAGTTGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: LGLPQVYSNPTQPDPNSSWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...ACTAGAGTTTGGATCTGGCTGGGTAGGATTACTATACACTTGGGGCAGGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp CCTACCCAGCCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGATGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: PTQPDPNSSQRRVPKCPRWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...TCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGGCTGGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACGAGCACTGTCTTAGTTaGGGTTCTTCCAAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHEHCLS*GSSKAE
Trigger: CTCTGCTTTGGAAGAACCCAAACTAAGACAGTGCTC...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp AACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTCTGGAGGGCTGTGCCTATCACATTaGCAGAGGGTAAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: NSSQRRVPKCPRTLTSGGLCLSH*QRVRQE
Trigger: TTCTTGTCTTACCCTCTGCAAATGTGATAGGCACAG...CCCTCCAGAGGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp TGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAAGCACACTGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: WQQVSNAGTWVHANLQAHWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...GTGTGCTTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCTGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp CCAGATCCAAACTCTAGTCAAAGAAGGGTCCCCAAATGTCCCAGAACACTGACCCTGTGCCTATCACATTaGCAGAGGGTAAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: PDPNSSQRRVPKCPRTLTLCLSH*QRVRQE
Trigger: TTCTTGTCTTACCCTCTGCAAATGTGATAGGCACAG...GGTCAGTGTTCTGGGACATTTGGGGACCCTTCTTTGACTAGAGTTTGGATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp AACAGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGGAGCACTGTCTTAGTTaGGGTTCTTCCAAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NSYWQQVSNAGTWVHANLEHCLS*GSSKAE
Trigger: CTCTGCTTTGGAAGAACCCAAACTAAGACAGTGCTC...CAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS-3UTR CAA 90 bp AGCTATTGGCAACAAGTAAGCAATGCTGGCACATGGGTACATGCCAACTTGCAATGGGTACATGCCAACTaGCAAGCACACAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: SYWQQVSNAGTWVHANLQWVHAN*QAHNSP
Trigger: AGGACTATTGTGTGCTTGCAAGTTGGCATGTACCCA...TTGCAAGTTGGCATGTACCCATGTGCCAGCATTGCTTACTTGTTGCCAATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS-3UTR CAA 90 bp AAGCACACAATAGTCCTTAACAGGGACCATCACCACCCTCATAATCCCTCAGTTCTGTGCCTATCACATTaGCAGAGGGTAAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: KHTIVLNRDHHHPHNPSVLCLSH*QRVRQE
Trigger: TTCTTGTCTTACCCTCTGCAAATGTGATAGGCACAG...AACTGAGGGATTATGAGGGTGGTGATGGTCCCTGTTAAGGACTATTGTGTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000644309.2
ENST00000645084.1
CDS GCA 72 bp GTGAGCAGCAGCACCGCGCCGTCGGCCAGCGCCAGGTaGAGCACAAGCGTGGCCGCCAGCGGTCGCCCCCGT +
Preference number: 6 (lower is better)
Translates to: VSSSTAPSASAR*STSVAASGRPR
Trigger: ACGGGGGCGACCGCTGGCGGCCACGCTTGTGCTGCACCTGGCGCTGGCCGACGGCGCGGTGCTGCTGCTCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000527924.6
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000642857.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 72 bp GGTAGGGGGCCCAGAGCAAGCCGAAGGCAAGCACGATaGCGCTCACCAGCCGGCCCACCCGCGCCCCGTGCC +
Preference number: 6 (lower is better)
Translates to: GRGPRASRRQAR*RSPAGPPAPRA
Trigger: GGCACGGGGCGCGGGTGGGCCGGCTGGTGAGCGCCATCGTGCTTGCCTTCGGCTTGCTCTGGGCCCCCTACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 72 bp AGGCTCAGGTGGGCGGCGGCGTGGACCGGCGACGGGTaGCACAGCTGGCATACGCGGTCCCTCCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: RLRWAAAWTGDG*HSWHTRSLHRW
Trigger: CCACCTGTGGAGGGACCGCGTATGCCAGCTGTGCCACCCGTCGCCGGTCCACGCCGCCGCCCACCTGAGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS TCA 72 bp AGGCCTGCCGGGTCAGGAAGGCCACAAAGAGCGGCGTaGGCAGCAGCACCGCGCCGTCGGCCAGCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RPAGSGRPQRAA*AAAPRRRPAPG
Trigger: ACCTGGCGCTGGCCGACGGCGCGGTGCTGCTGCTCACGCCGCTCTTTGTGGCCTTCCTGACCCGGCAGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000527924.6
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000642857.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 72 bp GCCGGCTCCGCCCAGCTTCGCCAAGGCCCCTTCCGGTaGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: AGSAQLRQGPFR*SQRCDRLQKVD
Trigger: GTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCGGAAGGGGCCTTGGCGAAGCTGGGCGGAGCCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 72 bp AAGAAGGCCAAGGCCGTAGTTCCCGCTCGCGCCGCCTaGCCGGCTCCGCCCAGCTTCGCCAAGGCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: KKAKAVVPARAA*PAPPSFAKAPS
Trigger: GGAAGGGGCCTTGGCGAAGCTGGGCGGAGCCGGCCAGGCGGCGCGAGCGGGAACTACGGCCTTGGCCTTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS TCA 72 bp CCGGTGGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTaGCTGCGTGGTAGGGGGCCCAGAGCAAGCCGAAGG +
Preference number: 6 (lower is better)
Translates to: PVEPALRPPAEG*LRGRGPRASRR
Trigger: CCTTCGGCTTGCTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCACCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS GCA 72 bp TGGAGCCAGCGCTGCGACCGCCTGCAGAAGGTTGACTaGGTGGTAGGGGGCCCAGAGCAAGCCGAAGGCAAG +
Preference number: 6 (lower is better)
Translates to: WSQRCDRLQKVD*VVGGPEQAEGK
Trigger: CTTGCCTTCGGCTTGCTCTGGGCCCCCTACCACGCAGTCAACCTTCTGCAGGCGGTCGCAGCGCTGGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS CCA 72 bp GTAGCAGACCGACATCCTTCTGGGCCTACAGGTGGGTaGAAGGCGCCACAGAGGGCGTTCAGGGGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: VADRHPSGPTGG*KAPQRAFRGGA
Trigger: TGCCCCACCCCTGAACGCCCTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAAGGATGTCGGTCTGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000645084.1
CDS CCA 72 bp GACGGTAGCAGACCGACATCCTTCTGGGCCTACAGGTaGGTGGAAGGCGCCACAGAGGGCGTTCAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: DGSRPTSFWAYR*VEGATEGVQGW
Trigger: CCACCCCTGAACGCCCTCTGTGGCGCCTTCCACCCACCTGTAGGCCCAGAAGGATGTCGGTCTGCTACCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000645084.1
CDS GCA 72 bp AGAGCCTTCGAAGAGCCGCGTGAGGAAACGGGGACCTaGCCGGGGCAGCAGATCTCCAGCGGTGAAGACGTA +
Preference number: 6 (lower is better)
Translates to: RAFEEPREETGT*PGQQISSGEDV
Trigger: TACGTCTTCACCGCTGGAGATCTGCTGCCCCGGGCAGGTCCCCGTTTCCTCACGCGGCTCTTCGAAGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000644309.2
ENST00000645084.1
CDS GCA 72 bp CACCAACGCACCCAGGCGTCCAGGCATGTGAGAGCCTaGCTTGCCAGGAAACAGCACAAGCTGAAGTGGGGC +
Preference number: 6 (lower is better)
Translates to: HQRTQASRHVRA*LARKQHKLKWG
Trigger: GCCCCACTTCAGCTTGTGCTGTTTCCTGGCAAGGCAGGCTCTCACATGCCTGGACGCCTGGGTGCGTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 72 bp CCGCGAAGTCTTCCAGCTCAGCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGACATCCTTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: PRSLPAQQCLVP*GTVADRHPSGP
Trigger: TGGCCCAGAAGGATGTCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTGCTGAGCTGGAAGACTTCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527924.6
ENST00000533293.2
ENST00000642857.1
ENST00000644309.2
CDS CCA 72 bp CCGCGAAGTCTTCCAGCTCAGCAGTGTCTCGTTCCCTaGGGGACGGTAGCAGACCGACATCCTTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PRSLPAQQCLVP*GTVADRHPSGP
Trigger: AGGCCCAGAAGGATGTCGGTCTGCTACCGTCCCCCAGGGAACGAGACACTGCTGAGCTGGAAGACTTCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000530080.1
ENST00000543919.1
ENST00000643080.1
ENST00000643638.1
ENST00000645084.1
CDS GCA 72 bp GGAAAGGGACAGGGAAGGGCAGCAGGTTGTAGGGTCTaGTGTCAAAGGTCCCATTCCGGACCGTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GKGQGRAAGCRV*CQRSHSGPSFS
Trigger: GGAGAAGGACGGTCCGGAATGGGACCTTTGACAGCAGACCCTACAACCTGCTGCCCTTCCCTGTCCCTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000528054.1
ENST00000533293.2
ENST00000543919.1
ENST00000643080.1
ENST00000644309.2
ENST00000645084.1
CDS GCA 72 bp CCTGCAGAGGTGACCCAAACAACTCAGTCCCCCACCTaGCTTATCCTTGCCTGTTTCCAGTCTCCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: PAEVTQTTQSPT*LILACFQSPGP
Trigger: CGGACCAGGAGACTGGAAACAGGCAAGGATAAGGCAGGTGGGGGACTGAGTTGTTTGGGTCACCTCTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS GCA 72 bp CCTCAAACACAACTCCTTCTTGGAACCCAGATCCCCTaGTCCCAGTCAGTTGACCTGCCCCACTCCTGGCCT +
Preference number: 6 (lower is better)
Translates to: PQTQLLLGTQIP*SQSVDLPHSWP
Trigger: AGGCCAGGAGTGGGGCAGGTCAACTGACTGGGAGCAGGGGATCTGGGTTCCAAGAAGGAGTTGTGTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS GCA 72 bp GGTGCCTACTCCTGTCCTGTGCCCCTAGTTAGCTCTTaGTTGTGGAAAGTCCTCATCTCCCAGCTTGATGGC +
Preference number: 6 (lower is better)
Translates to: GAYSCPVPLVSS*LWKVLISQLDG
Trigger: GCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGGCACAGGACAGGAGTAGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527924.6
ENST00000642857.1
CDS GCA 72 bp TCTGGGCAAAACTGGATGGTGGGGTGTAAAGGGACGTaGACAGATCTACTTACCAAGCTGGGAGCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGQNWMVGCKGT*TDLLTKLGASR
Trigger: CCTGCTTGCTCCCAGCTTGGTAAGTAGATCTGTGCACGTCCCTTTACACCCCACCATCCAGTTTTGCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS TCA 72 bp AAAAGAAAGGCCTCTGCTCAAGTAACAGCCAGAACTTaGGGTTGCTTGGGGAGGGCACCAGGAGCACTGTCT +
Preference number: 6 (lower is better)
Translates to: KRKASAQVTART*GCLGRAPGALS
Trigger: AGACAGTGCTCCTGGTGCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTACTTGAGCAGAGGCCTTTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS TCA 72 bp CAGGGGATGCATGGAGGCATAATGGTTAGGGAGTCATaGCACACAACCATGAAGAGGCCCCATTACCAGGCT +
Preference number: 6 (lower is better)
Translates to: QGMHGGIMVRES*HTTMKRPHYQA
Trigger: AGCCTGGTAATGGGGCCTCTTCATGGTTGTGTGTCATGACTCCCTAACCATTATGCCTCCATGCATCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 72 bp TACTCCTGTCCTGTGCCCCTAGTTAGCTCTTGCTTGTaGAAAGTCCTCATCTCCCAGCTTGATGGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: YSCPVPLVSSCL*KVLISQLDGFL
Trigger: GAGGAAGCCATCAAGCTGGGAGATGAGGACTTTCCACAAGCAAGAGCTAACTAGGGGCACAGGACAGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527924.6
ENST00000642857.1
CDS CAA 72 bp AAAGGCCTCTGCTCAAGTAACAGCCAGAACTTGAGGTaGCTTGGGGAGGGCACCAGGAGCACTGTCTTAGTT +
Preference number: 6 (lower is better)
Translates to: KGLCSSNSQNLR*LGEGTRSTVLV
Trigger: AACTAAGACAGTGCTCCTGGTGCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTACTTGAGCAGAGGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CAA 90 bp AGGGAAAAGAAAGGCCTCTGCTCAAGTAACAGCCAGAACTTGAGGTaGCTTGGGGAGGGCACCAGGAGCACTGTCTTAGTTTGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: REKKGLCSSNSQNLR*LGEGTRSTVLVWVL
Trigger: AAGAACCCAAACTAAGACAGTGCTCCTGGTGCCCTCCCCAAGCAACCTCAAGTTCTGGCTGTTACTTGAGCAGAGGCCTTTCTTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1
CDS CCA 72 bp AGCCCCATTCTAGCACATCTGGGCAAAACTGGATGGTaGGGTGTAAAGGGACGTGCACAGATCTACTTACCA +
Preference number: 6 (lower is better)
Translates to: SPILAHLGKTGW*GVKGRAQIYLP
Trigger: TGGTAAGTAGATCTGTGCACGTCCCTTTACACCCCACCATCCAGTTTTGCCCAGATGTGCTAGAATGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528054.1
ENST00000645084.1