RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTB4R (Homo sapiens)

Ensembl gene IDs: ENSG00000213903

Ensembl transcript IDs: ENST00000345363.8, ENST00000396782.2, ENST00000396789.4, ENST00000553481.1, ENST00000556141.1, ENST00000645335.1, ENST00000645989.1, ENST00000646659.1, ENST00000646739.1, ENST00000647085.2

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTTCCTTCTGCATCCTTCTGCACAGATGCTGGTATATGGGTCTTaGGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCC +
Preference number: 1 (lower is better)
Translates to: CFLLHPSAQMLVYGS*DIDDSFSLAHTLGS
Trigger: GGACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATACCAGCATCTGTGCAGAAGGATGCAGAAGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 2 (lower is better)
Translates to: LPVGARLEHALTRPSLCSSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 2 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 2 (lower is better)
Translates to: KAACGSQAGARSHSALTLSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: KAACGSQAGARSHSALTLLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGCTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 2 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGAGTCTGGCCTCTTTGTaGAATGGAGGGAAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKSLASL*NGGKEG
Trigger: GCCTTCCTTCCCTCCATTTCACAAAGAGGCCAGACT...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR GCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: MEGRKASPRTSPMERTKITRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CAA 90 bp AGACAGCTTGGGGATCTCCTCTTCTTAGGTCCATCCAACATCCCTTaGCTTCCTTCTGCATCCTTCTGCACAGATGCTGGTATATGGGTC +
Preference number: 2 (lower is better)
Translates to: RQLGDLLFLGPSNIP*LPSASFCTDAGIWV
Trigger: GACCCATATACCAGCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAGATCCCCAAGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCACTGGCTCATACTTTaGGGTCCATGGGAGTATGTC +
Preference number: 2 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKHWLIL*GPWEYV
Trigger: GACATACTCCCATGGACCCCAAAGTATGAGCCAGTG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCCGGGTCACAGAACCTaGAGTGATAAGCCCACATGG +
Preference number: 2 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMPGHRT*SDKPTW
Trigger: CCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 2 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGCCCCACTCACAAGGTTaGCCAAATTTCAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLPHSQG*PNFRLQ
Trigger: CTGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGG...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR GCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 2 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR TCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 2 (lower is better)
Translates to: TRRLITGFKEDISQQCCFSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR GCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: TRRLITGFKEDISQQCCFTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: MEGRKASPRTSPMERTKIRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTGGAATCTTTGTTTCCTaGGGCCCTCAGCCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLGIFVS*GPQPHP
Trigger: AGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATTCC...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CAA 90 bp GGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTATaGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTATCACAGG +
Preference number: 2 (lower is better)
Translates to: GRHPLEHLLWRGQRL*AGSWSHSNKETYHR
Trigger: CCTGTGATAAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR GCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: TRRLITGFKEDISQQCCFLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCAAAATTGTAAATCATaGGGAACTAAAGGACGTGAC +
Preference number: 2 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKQNCKS*GTKGRD
Trigger: GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 2 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGTACTCGGAATCATCTaGGATGGGGGAAGTCTATGT +
Preference number: 2 (lower is better)
Translates to: YMGLEILMTHSHWLILWGVLGII*DGGSLC
Trigger: ACATAGACTTCCCCCATCCCAGATGATTCCGAGTAC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACATTATTGGCAGGAAGTTaGAGTCATTCTAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTLLAGS*SHSNKE
Trigger: CTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAA...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACTTAGTCCTCAAGTCTaGCCTCTTTGTGAAATGGAG +
Preference number: 2 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGLSPQV*PLCEME
Trigger: CTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTGCCAGGGTGTGTTGTaGAGGTTAGCAGATGCTGAT +
Preference number: 2 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVCQGVL*RLADAD
Trigger: ATCAGCATCTGCTAACCTCCACAACACACCCTGGCA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CAA 90 bp CATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGTaGCATGTGGATATTTGGTTTCCCTCTCTTACTTGCTCTTTTGTT +
Preference number: 2 (lower is better)
Translates to: HGSMSNLDILDLLRM*HVDIWFPSLTCSFV
Trigger: AACAAAAGAGCAAGTAAGAGAGGGAAACCAAATATCCACATGCAACATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACTAGAACATCTCCTATaGAGAGGACAAAGATTATTG +
Preference number: 2 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGLEHLL*RGQRLL
Trigger: CAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTATTGGCAGGAAGTTaGAGTCATTCTAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLLLAGS*SHSNKE
Trigger: CTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR GCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 2 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CCA 72 bp GTGCTGTTTTCTCAGAAGGTCCCGGGTCACAGAACCTaGAGTGATAAGCCCACATGGGTGGTCTTCCTAGAC +
Preference number: 3 (lower is better)
Translates to: VLFSQKVPGHRT*SDKPTWVVFLD
Trigger: GTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAGAAAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 3 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCTGTGCCAGGGTGTGTaGTGGAGGTTAGCAGATGCT +
Preference number: 3 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKLCQGV*WRLADA
Trigger: AGCATCTGCTAACCTCCACAACACACCCTGGCACAG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: TRRLITGFKEDISQQCCFHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 3 (lower is better)
Translates to: YMGLEILMTHSHWLILWGHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACACTTTTGGGAATCTTaGTTTCCTGGGGCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTHFWES*FPGALS
Trigger: GCTGAGGGCCCCAGGAAACAAAGATTCCCAAAAGTG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CCA 72 bp TGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATaGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGT +
Preference number: 3 (lower is better)
Translates to: WREGRHPLEHLL*RGQRLLAGSWS
Trigger: ACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 3 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGGTTGCATGTGGATATTaGGTTTCCCTCTCTTACTTG +
Preference number: 3 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKVACGY*VSLSYL
Trigger: CAAGTAAGAGAGGGAAACCAAATATCCACATGCAAC...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 3 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGTCATCCCTCTCACTTTaGGGAATCTTTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMSSLSL*GIFVSW
Trigger: CCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATGA...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR TCA 72 bp CTGCATCCTTCTGCACAGATGCTGGTATATGGGTCTTaGGATATTGATGACTCATTCTCACTGGCTCATACT +
Preference number: 3 (lower is better)
Translates to: LHPSAQMLVYGS*DIDDSFSLAHT
Trigger: AGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATACCAGCATCTGTGCAGAAGGATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR GCA 72 bp CATCCCTTTGCTTCCTTCTGCATCCTTCTGCACAGATaGTGGTATATGGGTCTTGAGATATTGATGACTCAT +
Preference number: 3 (lower is better)
Translates to: HPFASFCILLHR*WYMGLEILMTH
Trigger: ATGAGTCATCAATATCTCAAGACCCATATACCAGCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 3 (lower is better)
Translates to: MEGRKASPRTSPMERTKIEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGATCATCCCTCTCACTTTaGGGAATCTTTGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGSSLSL*GIFVSW
Trigger: CCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATGA...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 3 (lower is better)
Translates to: TRRLITGFKEDISQQCCFTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CCA 72 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTaGCTCATACTTTGGGGTCCATGGGAGTATGTCAAA +
Preference number: 3 (lower is better)
Translates to: YMGLEILMTHSH*LILWGPWEYVK
Trigger: TTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CCA 72 bp TATGTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATaGGGAACTAAAGGACGTGACTCTCAACTACCGAGA +
Preference number: 3 (lower is better)
Translates to: YVSLCPFQNCKS*GTKGRDSQLPR
Trigger: TCTCGGTAGTTGAGAGTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR-3UTR CAA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTCTGTAGACTGCGTTTaGCTAAGTATTATCTGCAGA +
Preference number: 3 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLSVDCV*LSIICR
Trigger: TCTGCAGATAATACTTAGCAAAACGCAGTCTACAGA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCCCCCGGGTCTCCATTaGCGCGGCCCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSPPGLH*RGPAPP
Trigger: TGGTGGGGCAGGGCCGCGGCAATGGAGACCCGGGGG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000345363.8
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSRTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCACTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCGGGGTTCACGCTGCTaGTCAGGAAGGCGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSRGSRC*SGRRVR
Trigger: TCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLPGALR*GTAGST
Trigger: TGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSAPSGQ*QSASAS
Trigger: GGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGC...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCAAGGGAGCAGGAACAGTaGTGCCTCATGCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSREQEQ*CLMPTL
Trigger: CAGGGTGGGCATGAGGCATCACTGTTCCTGCTCCCT...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLRTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLTPRSP*PPAAWR
Trigger: TCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGT...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGCCCCCGGGTCTCCATTaGCGCGGCCCTGCCCCACCA +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKPPGLH*RGPAPP
Trigger: TGGTGGGGCAGGGCCGCGGCAATGGAGACCCGGGGG...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000345363.8
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACGGGGTTCACGCTGCTaGTCAGGAAGGCGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRRGSRC*SGRRVR
Trigger: TCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCCAGGAAGTGGAGGCTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSPGSGG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAGCCTCCACTTCCTGG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCAGGGTCAGGGCAGGGTaGTGTAGCCTATCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSRVRAG*CSLSLD
Trigger: ATCCAGGGATAGGCTACACCACCCTGCCCTGACCCT...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR TCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTTAGACACACAAAGTTaGGGCCGAGCTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSLDTQS*GRAGRL
Trigger: CAGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTCTGGATCTGTCCCACTaGCAAAGGCCTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLLDLSH*QRPGPR
Trigger: CCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAG...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGATTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRLVRSF*DTKGRA
Trigger: GGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAA...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCCGGGTCACAGAACCTaGAGTGATAAGCCCACATGG +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSPGHRT*SDKPTW
Trigger: CCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGAGAGGTGGGGCCAGATaGGAAGAGACCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLRGGAR*EETRKE
Trigger: CTCCTTCCTGGTCTCTTCTCATCTGGCCCCACCTCT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR GCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSRTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCARTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKTPRSP*PPAAWR
Trigger: TCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCAGCCCCCACTTGTTCTaGTTGGAGAAAAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSSPHLF*LEKSQS
Trigger: GCTCTGGCTTTTCTCCAAGCAGAACAAGTGGGGGCT...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCACACCTACCTTGTGCTTaGCCATGTGGTTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSHLPCA*PCGYPA
Trigger: AGCAGGGTAACCACATGGGCAAGCACAAGGTAGGTG...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSGPRSR*CLLNQP
Trigger: TGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCC...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACA +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLTRGRV*PAERTT
Trigger: TGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCCCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCPGALR*GTAGST
Trigger: TGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGG...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFPGALR*GTAGST
Trigger: TGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTATGTCCGAGTAGCTaGCCACCACAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLLCPSS*PPQPGR
Trigger: CCTTCCTGGCTGTGGTGGCCAGCTACTCGGACATAG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAGAACTGGTTGGAAGCTaGTGCCAATCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRELVGS*CQSQGQ
Trigger: CTGACCCTGGGATTGGCATCAGCTTCCAACCAGTTC...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGGAACTGGTTGGAAGCTaGTGCCAATCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLELVGS*CQSQGQ
Trigger: CTGACCCTGGGATTGGCATCAGCTTCCAACCAGTTC...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGAGGAAACGGGGACCTaGCCGGGGCAGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCEETGT*PGQQIS
Trigger: GGAGATCTGCTGCCCCGGGCAGGTCCCCGTTTCCTC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345363.8
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCRTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCASRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSRWKAR*PSLGYR
Trigger: GCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCT...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKRWKAR*PSLGYR
Trigger: GCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCRWKAR*PSLGYR
Trigger: GCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCACCCTTTGCTTCCTTCTaGATCCTTCTGCACAGATGC +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSPFASF*ILLHRC
Trigger: GCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGG...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTGCCAGGGTGTGTTGTaGAGGTTAGCAGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSCQGVL*RLADAD
Trigger: ATCAGCATCTGCTAACCTCCACAACACACCCTGGCA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTGGAATCTTTGTTTCCTaGGGCCCTCAGCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLGIFVS*GPQPHP
Trigger: AGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATTCC...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTAGGGTCAGGGCAGGGTaGTGTAGCCTATCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLRVRAG*CSLSLD
Trigger: ATCCAGGGATAGGCTACACCACCCTGCCCTGACCCT...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCATTGGCAGGAACTGGTTaGAAGCTGATGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSLAGTG*KLMPIP
Trigger: TGGGATTGGCATCAGCTTCCAACCAGTTCCTGCCAA...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTTGGCAGGAACTGGTTaGAAGCTGATGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSLAGTG*KLMPIP
Trigger: TGGGATTGGCATCAGCTTCCAACCAGTTCCTGCCAA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR TCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCACAGCCAGCGCCACTaGCAGCAGGATGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAHSQRH*QQDDSQ
Trigger: CTGGCTATCATCCTGCTGTCAGTGGCGCTGGCTGTG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAGCAGGTTGTAGGGTCTaGTGTCAAAGGTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRAGCRV*CQRSHS
Trigger: GGAATGGGACCTTTGACAGCAGACCCTACAACCTGC...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000345363.8
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSSRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCCGGGGTTCACGCTGCTaGTCAGGAAGGCGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCRGSRC*SGRRVR
Trigger: TCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCGGGGTTCACGCTGCTaGTCAGGAAGGCGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFRGSRC*SGRRVR
Trigger: TCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCCTTCTGCATCCTTCTaGACAGATGCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSPSASF*TDAGIW
Trigger: CCATATACCAGCATCTGTGCAGAAGGATGCAGAAGG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRGPRSR*CLLNQP
Trigger: TGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCC...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCTGGATCTGTCCCACTaGCAAAGGCCTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSLDLSH*QRPGPR
Trigger: CCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCCACAGCCAGCGCCACTaGCAGCAGGATGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCHSQRH*QQDDSQ
Trigger: CTGGCTATCATCCTGCTGTCAGTGGCGCTGGCTGTG...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCACAGCCAGCGCCACTaGCAGCAGGATGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFHSQRH*QQDDSQ
Trigger: CTGGCTATCATCCTGCTGTCAGTGGCGCTGGCTGTG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFAPSGQ*QSASAS
Trigger: GGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTGGAAAAAGGGAGCAGTaGGCAATACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSGKREQ*AIRPGR
Trigger: CCGACCTGGCCGTATTGCTCACTGCTCCCTTTTTCC...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTACACCACAAAGCTGTTaGCGGGAAGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSTPQSC*REAPQP
Trigger: TGGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGT...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCACACCACAAAGCTGTTaGCGGGAAGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCATPQSC*REAPQP
Trigger: TGGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGT...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKTPRSP*PPAAWR
Trigger: TCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGT...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTGCTGCCACTGTTGTTaGCATCTTCCTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSCCHCC*HLPKTL
Trigger: CAAGGTTTTAGGAAGATGGCAACAACAGTGGCAGCA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGCCTCATGCCCACCCTaGCAAGAGGGGAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKASCPP*QEGKPA
Trigger: TGCTGGTTTCCCCTCTTGGCAGGGTGGGCATGAGGC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCTTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFLVRSF*DTKGRA
Trigger: GGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAA...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCTTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCLVRSF*DTKGRA
Trigger: GGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAA...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKLVRSF*DTKGRA
Trigger: GGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAA...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCTATGTCCGAGTAGCTaGCCACCACAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCALCPSS*PPQPGR
Trigger: CCTTCCTGGCTGTGGTGGCCAGCTACTCGGACATAG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCCAGCAATGCAGAAATaGTCCCCTTACCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLPAMQK*SPYPFP
Trigger: AGGAAACGGGTAAGGGGACCATTTCTGCATTGCTGG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGTTGGCAGGAACTGGTTaGAAGCTGATGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLLAGTG*KLMPIP
Trigger: TGGGATTGGCATCAGCTTCCAACCAGTTCCTGCCAA...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR TCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGGAAAAAGGGAGCAGTaGGCAATACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSGKREQ*AIRPGR
Trigger: CCGACCTGGCCGTATTGCTCACTGCTCCCTTTTTCC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGGAAAAAGGGAGCAGTaGGCAATACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKGKREQ*AIRPGR
Trigger: CCGACCTGGCCGTATTGCTCACTGCTCCCTTTTTCC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCCCCACTCACAAGGTTaGCCAAATTTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLPHSQG*PNFRLQ
Trigger: CTGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCATGAGGAGCAGGAGTaGGGGAGCAGGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAHEEQE*GSRNSD
Trigger: ATCACTGTTCCTGCTCCCTCACTCCTGCTCCTCATG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACTGAGTCTGGATTTATaGTCTGGGCAAGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRLSLDL*SGQGDW
Trigger: CCAATCTCCTTGCCCAGATCATAAATCCAGACTCAG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCAGAGGTGGGGCCAGATaGGAAGAGACCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFRGGAR*EETRKE
Trigger: CTCCTTCCTGGTCTCTTCTCATCTGGCCCCACCTCT...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR TCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCAGAGGTGGGGCCAGATaGGAAGAGACCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCRGGAR*EETRKE
Trigger: CTCCTTCCTGGTCTCTTCTCATCTGGCCCCACCTCT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGACACCACAAAGCTGTTaGCGGGAAGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKTPQSC*REAPQP
Trigger: TGGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCRTTPR*LPAPAG
Trigger: CCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLTPRSP*PPAAWR
Trigger: TCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCAACAGTGATGCCTCATaGCCACCCTGCCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCNSDAS*PPCQEG
Trigger: CCCCTCTTGGCAGGGTGGGCATGAGGCATCACTGTT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKTRGRV*PAERTT
Trigger: TGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGCCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLPGALR*GTAGST
Trigger: TGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGG...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAAGTGATAAGCCCACATaGGTGGTCTTCCTAGACAAG +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRSDKPT*VVFLDK
Trigger: CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACT...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGAGGGTCAGGGCAGGGTaGTGTAGCCTATCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSRVRAG*CSLSLD
Trigger: ATCCAGGGATAGGCTACACCACCCTGCCCTGACCCT...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCGGGAGGACAAGCTTTaGCAGGAACTGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAREDKL*QELVGS
Trigger: GCTTCCAACCAGTTCCTGCCAAAGCTTGTCCTCCCG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396782.2
ENST00000646739.1
CDS-3UTR TCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGCAGCAGGAAGCCCGTaGCAGCCTCGAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFAAGSP*QPRRLD
Trigger: ATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGCAGCAGGAAGCCCGTaGCAGCCTCGAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKAAGSP*QPRRLD
Trigger: ATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGGCAGGAGAATCATGTaGACCCAGGAAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFGRRIM*TQEVEA
Trigger: AGCCTCCACTTCCTGGGTTCACATGATTCTCCTGCC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGAACTGGTTGGAAGCTaGTGCCAATCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCELVGS*CQSQGQ
Trigger: CTGACCCTGGGATTGGCATCAGCTTCCAACCAGTTC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR GCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKSRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCATTGCATGTGGATATTTaGTTTCCCTCTCTTACTTGC +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSLHVDI*FPSLTC
Trigger: GCAAGTAAGAGAGGGAAACCAAATATCCACATGCAA...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGGTGTAGCCTATCCCTaGATCTGTCCCACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAGVAYP*ICPTAK
Trigger: TTTGGCAGTGGGACAGATCCAGGGATAGGCTACACC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCGGGAGGACAAGCTTTaGCAGGAACTGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFREDKL*QELVGS
Trigger: GCTTCCAACCAGTTCCTGCCAAAGCTTGTCCTCCCG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396782.2
ENST00000646739.1
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMGRRVR*ARCGPG
Trigger: GCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCC...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCAGCCCCCACTTGTTCTaGTTGGAGAAAAGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCSPHLF*LEKSQS
Trigger: GCTCTGGCTTTTCTCCAAGCAGAACAAGTGGGGGCT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGACCATGGGCCTTCCTaGTTCCCTTTCAACTCTCAC +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKDHGPS*FPFNSH
Trigger: GTGAGAGTTGAAAGGGAAGCAGGAAGGCCCATGGTC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCCACCTACCTTGTGCTTaGCCATGTGGTTACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCHLPCA*PCGYPA
Trigger: AGCAGGGTAACCACATGGGCAAGCACAAGGTAGGTG...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKGPRSR*CLLNQP
Trigger: TGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCALQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCAAAATTGTAAATCATaGGGAACTAAAGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: LPVGARLEHALTRPSLCSQNCKS*GTKGRD
Trigger: GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCACAAAATTGTAAATCATaGGGAACTAAAGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSQNCKS*GTKGRD
Trigger: GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTG...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGCTCACCATACAGAATaGGCGAGAGGACTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQVLNWLRASILPGGKCAAHHTE*ARGLGN
Trigger: ATTTCCCAGTCCTCTCGCCCATTCTGTATGGTGAGC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGTCTGGATTTATGATCTaGGCAAGGAGATTGGCACTA +
Preference number: 4 (lower is better)
Translates to: KAACGSQAGARSHSALTLSGFMI*ARRLAL
Trigger: TAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGA...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGCCAGAGAAGGGAAATaGGCTCAGATTGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKAREGK*AQIGGY
Trigger: GTAGCCTCCAATCTGAGCCCATTTCCCTTCTCTGGC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGGTGTAGCCTATCCCTaGATCTGTCCCACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCGVAYP*ICPTAK
Trigger: TTTGGCAGTGGGACAGATCCAGGGATAGGCTACACC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR TCA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACTGGTATATGGGTCTTaGGATATTGATGACTCATTC +
Preference number: 4 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRLVYGS*DIDDSF
Trigger: GAATGAGTCATCAATATCTCAAGACCCATATACCAG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGGAGGAAACGGGGACCTaGCCGGGGCAGCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMEETGT*PGQQIS
Trigger: GGAGATCTGCTGCCCCGGGCAGGTCCCCGTTTCCTC...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000345363.8
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCACACCACAAAGCTGTTaGCGGGAAGCCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCTPQSC*REAPQP
Trigger: TGGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGT...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGCAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMRWKAR*PSLGYR
Trigger: GCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCT...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGTPRSP*PPAAWR
Trigger: TCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGT...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCCTCCCAGTTTCAGCTaGTGTTCTCAAATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSPPSFS*CSQIGA
Trigger: TGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCTCCAGGTACTGAACTaGCTCAGAGCTAGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFLQVLN*LRASIL
Trigger: CAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCACTGGCTCATACTTTaGGGTCCATGGGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSHWLIL*GPWEYV
Trigger: GACATACTCCCATGGACCCCAAAGTATGAGCCAGTG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGCACTGGCTCATACTTTaGGGTCCATGGGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKHWLIL*GPWEYV
Trigger: GACATACTCCCATGGACCCCAAAGTATGAGCCAGTG...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCTCACCATACAGAATaGGCGAGAGGACTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSAHHTE*ARGLGN
Trigger: ATTTCCCAGTCCTCTCGCCCATTCTGTATGGTGAGC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTCTGGATTTATGATCTaGGCAAGGAGATTGGCACTA +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLSGFMI*ARRLAL
Trigger: TAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGA...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTCCAAATGGTCTCCTTaGTATCACACAGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: LKLPVGARLEHALTRPSLSKWSP*YHTECQ
Trigger: TTGGCATTCTGTGTGATACCAAGGAGACCATTTGGA...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGTTGGCAGGAACTGGTTaGAAGCTGATGCCAATCCCA +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKLAGTG*KLMPIP
Trigger: TGGGATTGGCATCAGCTTCCAACCAGTTCCTGCCAA...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCGCAGCAGGAAGCCCGTaGCAGCCTCGAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCAAGSP*QPRRLD
Trigger: ATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGC...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGTGTAGGTTGGAGCTGTaGCTAGGTCCTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLCRLEL*LGPGSG
Trigger: CCCAGACCCAGGACCTAGTCACAGCTCCAACCTACA...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTAGAGGTGGGGCCAGATaGGAAGAGACCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIRGGAR*EETRKE
Trigger: CTCCTTCCTGGTCTCTTCTCATCTGGCCCCACCTCT...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFVTERF*ILFRIL
Trigger: GAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCAC...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCVTERF*ILFRIL
Trigger: GAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCAC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTC +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSVTERF*ILFRIL
Trigger: GAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCAC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLSRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMSRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGACTCGGCCCTCACTTTaGTCCACCTCTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKTRPSL*STSPSS
Trigger: AGAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGT...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCCTCCCAGTTTCAGCTaGTGTTCTCAAATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSPPSFS*CSQIGA
Trigger: TGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGCCTCCCAGTTTCAGCTaGTGTTCTCAAATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKPPSFS*CSQIGA
Trigger: TGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGG...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGAACAGTGATGCCTCATaGCCACCCTGCCAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLNSDAS*PPCQEG
Trigger: CCCCTCTTGGCAGGGTGGGCATGAGGCATCACTGTT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACA +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRPGALR*GTAGST
Trigger: TGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGG...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGTACTCGGAATCATCTaGGATGGGGGAAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKVLGII*DGGSLC
Trigger: ACATAGACTTCCCCCATCCCAGATGATTCCGAGTAC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGAAGTTGAGGCCGAGCTaGCAGGCTGAGCATGAGGAG +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLKLRPS*QAEHEE
Trigger: CTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCACAGCCAGCGCCACTaGCAGCAGGATGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMHSQRH*QQDDSQ
Trigger: CTGGCTATCATCCTGCTGTCAGTGGCGCTGGCTGTG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLAPSGQ*QSASAS
Trigger: GGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGC...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAGGAAAAAGGGAGCAGTaGGCAATACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTGKREQ*AIRPGR
Trigger: CCGACCTGGCCGTATTGCTCACTGCTCCCTTTTTCC...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAAAGTGGAGGCTGCAGTaGGCTGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTKWRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCAGCTCACTGCAGCCTCCACTT...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTTTAGACACACAAAGTTaGGGCCGAGCTGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKILDTQS*GRAGRL
Trigger: CAGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAA...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGATGTGGTTACCCTGCTaGGTCTGGATTTATGATCTG +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKMWLPC*VWIYDL
Trigger: CAGATCATAAATCCAGACTCAGCAGGGTAACCACAT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCATGTGGTTACCCTGCTaGGTCTGGATTTATGATCTG +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCMWLPC*VWIYDL
Trigger: CAGATCATAAATCCAGACTCAGCAGGGTAACCACAT...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGTGCTGCCACTGTTGTTaGCATCTTCCTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSCCHCC*HLPKTL
Trigger: CAAGGTTTTAGGAAGATGGCAACAACAGTGGCAGCA...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCAAAAAGTACACTGCTaGCACTGTTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSQKVHC*HCCCHL
Trigger: AAGATGGCAACAACAGTGGCAGCAGTGTACTTTTTG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGAGPSP*CVASGT
Trigger: TGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGC...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCTGTGGGAGCCAGGCTaGAGCACGCTCTCACTCGGC +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGLWEPG*STLSLG
Trigger: GCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLQVLNWLRASILPGGKRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCCCGGGTCACAGAACCTaGAGTGATAAGCCCACATGG +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFPGHRT*SDKPTW
Trigger: CCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTCCGGGTCACAGAACCTaGAGTGATAAGCCCACATGG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIPGHRT*SDKPTW
Trigger: CCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCTTAGTCCTCAAGTCTaGCCTCTTTGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFLSPQV*PLCEME
Trigger: CTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGCTTAGTCCTCAAGTCTaGCCTCTTTGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKLSPQV*PLCEME
Trigger: CTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAG...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCTGCGGATGTTGCATGTaGATATTTGGTTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFCGCCM*IFGFPL
Trigger: GAGAGGGAAACCAAATATCCACATGCAACATCCGCA...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCTGCTGTTCTCAAATTaGTGCACCATACCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFLLFSN*CTIPSS
Trigger: ACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTCACAGCCAGCGCCACTaGCAGCAGGATGATAGCCAG +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLHSQRH*QQDDSQ
Trigger: CTGGCTATCATCCTGCTGTCAGTGGCGCTGGCTGTG...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGGGAAAAAGGGAGCAGTaGGCAATACGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLGKREQ*AIRPGR
Trigger: CCGACCTGGCCGTATTGCTCACTGCTCCCTTTTTCC...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCAGTCTGGCCTCTTTGTaGAATGGAGGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFSLASL*NGGKEG
Trigger: GCCTTCCTTCCCTCCATTTCACAAAGAGGCCAGACT...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGAAGCCAGAGCAGAGATaGCCTCGCAGCTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRKPEQR*PRSCQR
Trigger: CCTCTGACAGCTGCGAGGTCATCTCTGCTCTGGCTT...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGAAGTGGAGGCTGCAGTaGGCTGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRKWRLQ*AEIAPL
Trigger: CAGTGGTGCGATCTCAGCTCACTGCAGCCTCCACTT...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGTGTAGGTTGGAGCTGTaGCTAGGTCCTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMCRLEL*LGPGSG
Trigger: CCCAGACCCAGGACCTAGTCACAGCTCCAACCTACA...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTCAACACCCAGATGCCTaGCAGCACCCGCCGGGCCAT +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVQHPDA*QHPPGH
Trigger: ATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTG...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGC +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVRWKAR*PSLGYR
Trigger: GCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCT...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCGGGGTTCACGCTGCTaGTCAGGAAGGCGAGTGCGA +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGRGSRC*SGRRVR
Trigger: TCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACGCACGGGGTTCACGCTaGTGCTCAGGAAGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDARGSR*CSGRRV
Trigger: CACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGTGC...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCCCCTTTGCTTCCTTCTaGATCCTTCTGCACAGATGC +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCPFASF*ILLHRC
Trigger: GCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGG...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGACCATGGGCCTTCCTaGTTCCCTTTCAACTCTCAC +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLDHGPS*FPFNSH
Trigger: GTGAGAGTTGAAAGGGAAGCAGGAAGGCCCATGGTC...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCCAGGAAGTGGAGGCTaGAGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMPGSGG*SELRSH
Trigger: GTGCGATCTCAGCTCACTGCAGCCTCCACTTCCTGG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAGGGCACATCAGTAAATaGCGAAGGGGGCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTGHISK*RRGQHS
Trigger: AGAGTGCTGCCCCCTTCGGCATTTACTGATGTGCCC...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACA +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRTRGRV*PAERTT
Trigger: TGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGT...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGCTATGTCCGAGTAGCTaGCCACCACAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLLCPSS*PPQPGR
Trigger: CCTTCCTGGCTGTGGTGGCCAGCTACTCGGACATAG...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCTATGTCCGAGTAGCTaGCCACCACAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMLCPSS*PPQPGR
Trigger: CCTTCCTGGCTGTGGTGGCCAGCTACTCGGACATAG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGGGAATCTTTGTTTCCTaGGGCCCTCAGCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLGIFVS*GPQPHP
Trigger: AGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATTCC...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCGCTCACCATACAGAATaGGCGAGAGGACTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCAHHTE*ARGLGN
Trigger: ATTTCCCAGTCCTCTCGCCCATTCTGTATGGTGAGC...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCCCCTTACCCGTTTCCTaGACAGAGGAATGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCPLPVS*TEECLL
Trigger: AAGGAGACATTCCTCTGTCCAGGAAACGGGTAAGGG...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDAPSGQ*QSASAS
Trigger: GGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGC...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCCCCACTCACAAGGTTaGCCAAATTTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKPHSQG*PNFRLQ
Trigger: CTGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAAGTCTGGCCTCTTTGTaGAATGGAGGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTSLASL*NGGKEG
Trigger: GCCTTCCTTCCCTCCATTTCACAAAGAGGCCAGACT...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGTATAATGGTGGCCACTaGGGTCCCTTAACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKYNGGH*GPLTFP
Trigger: TGGAAAGGTTAAGGGACCTCAGTGGCCACCATTATA...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGGCAGGAGAATCATGTaGACCCAGGAAGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRGRRIM*TQEVEA
Trigger: AGCCTCCACTTCCTGGGTTCACATGATTCTCCTGCC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGCATGAGGAGCAGGAGTaGGGGAGCAGGAACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRHEEQE*GSRNSD
Trigger: ATCACTGTTCCTGCTCCCTCACTCCTGCTCCTCATG...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVSRALL*GTRGRV
Trigger: CACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTGCTCAGGAAGGCGAGTaGGATGAGCACGTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLAQEGE*DEHVAG
Trigger: GCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGC...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGCCCTTTGCTTCCTTCTaGATCCTTCTGCACAGATGC +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLPFASF*ILLHRC
Trigger: GCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGG...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCCTCCCAGTTTCAGCTaGTGTTCTCAAATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKPPSFS*CSQIGA
Trigger: TGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTCTGGATCTGTCCCACTaGCAAAGGCCTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVLDLSH*QRPGPR
Trigger: CCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAG...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGGTACTCGGAATCATCTaGGATGGGGGAAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKVLGII*DGGSLC
Trigger: ACATAGACTTCCCCCATCCCAGATGATTCCGAGTAC...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCTTATTGGCAGGAAGTTaGAGTCATTCTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: VLNWLRASILPGGKCASFLLAGS*SHSNKE
Trigger: CTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAA...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCTTGCATGTGGATATTTaGTTTCCCTCTCTTACTTGC +
Preference number: 4 (lower is better)
Translates to: LLQVLNWLRASILPGGKCLHVDI*FPSLTC
Trigger: GCAAGTAAGAGAGGGAAACCAAATATCCACATGCAA...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGTTGCATGTGGATATTTaGTTTCCCTCTCTTACTTGC +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKLHVDI*FPSLTC
Trigger: GCAAGTAAGAGAGGGAAACCAAATATCCACATGCAA...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVAPSGQ*QSASAS
Trigger: GGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGC...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCGCTGGCGTACATGCTaGCTCCGCAGACATAGTGAC +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGRWRTC*LRRHSD
Trigger: GTCACTATGTCTGCGGAGTCAGCATGTACGCCAGCG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTCCCCACTCACAAGGTTaGCCAAATTTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIPHSQG*PNFRLQ
Trigger: CTGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGG...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGAAAGCCAGAGCAGAGATaGCCTCGCAGCTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRKPEQR*PRSCQR
Trigger: CCTCTGACAGCTGCGAGGTCATCTCTGCTCTGGCTT...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTAGGGAGCAGGAACAGTaGTGCCTCATGCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLREQEQ*CLMPTL
Trigger: CAGGGTGGGCATGAGGCATCACTGTTCCTGCTCCCT...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTCTGAGTCTGGATTTATaGTCTGGGCAAGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKILSLDL*SGQGDW
Trigger: CCAATCTCCTTGCCCAGATCATAAATCCAGACTCAG...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAA +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGGPSPW*VASGTQ
Trigger: TTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGTGCTGCCACTGTTGTTaGCATCTTCCTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKCCHCC*HLPKTL
Trigger: CAAGGTTTTAGGAAGATGGCAACAACAGTGGCAGCA...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGATTTGTTGCGGATGTTaGATGTGGATATTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKICCGC*MWIFGF
Trigger: GAAACCAAATATCCACATGCAACATCCGCAACAAAT...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTCCTTCTGCATCCTTCTaGACAGATGCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIPSASF*TDAGIW
Trigger: CCATATACCAGCATCTGTGCAGAAGGATGCAGAAGG...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACCCTTTGCTTCCTTCTaGATCCTTCTGCACAGATGC +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTPFASF*ILLHRC
Trigger: GCATCTGTGCAGAAGGATGCAGAAGGAAGCAAAGGG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTGCCTCATGCCCACCCTaGCAAGAGGGGAAACCAGCA +
Preference number: 4 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSASCPP*QEGKPA
Trigger: TGCTGGTTTCCCCTCTTGGCAGGGTGGGCATGAGGC...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGGTGTGGCCTCAAGATaGAGGTCTAGACTGGATAAT +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLGVASR*RSRLDN
Trigger: ATTATCCAGTCTAGACCTGCATCTTGAGGCCACACC...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLLVRSF*DTKGRA
Trigger: GGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACA +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGTRGRV*PAERTT
Trigger: TGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGT...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGASKIR*KARCPS
Trigger: CGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCCTTAGTCCTCAAGTCTaGCCTCTTTGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCLSPQV*PLCEME
Trigger: CTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAG...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACGGAATCTTTGTTTCCTaGGGCCCTCAGCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDGIFVS*GPQPHP
Trigger: AGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATTCC...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGGAATCTTTGTTTCCTaGGGCCCTCAGCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGGIFVS*GPQPHP
Trigger: AGGGTGGGGCTGAGGGCCCCAGGAAACAAAGATTCC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTAAGTTGAGGCCGAGCTaGCAGGCTGAGCATGAGGAG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGKLRPS*QAEHEE
Trigger: CTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTT...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGATGCAGGTCTAGACTaGATAATTGAACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSDAGLD*IIEQSS
Trigger: ACTACTTTGTTCAATTATCCAGTCTAGACCTGCATC...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGAGCAGCAGGAAGCCCGTaGCAGCCTCGAAGATTAGAT +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRAAGSP*QPRRLD
Trigger: ATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGC...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGATCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGAACTGGTTGGAAGCTaGTGCCAATCCCAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGELVGS*CQSQGQ
Trigger: CTGACCCTGGGATTGGCATCAGCTTCCAACCAGTTC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAGTCCAAAACTCCAGGTaGCTTGGGCCAGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGVQNSR*LGPGSE
Trigger: TTCACTTCCTGGCCCAAGGCACCTGGAGTTTTGGAC...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: VLMVKAACGSQAGARSHSLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGGGCACATCAGTAAATaGCGAAGGGGGCAGCACTCT +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGGHISK*RRGQHS
Trigger: AGAGTGCTGCCCCCTTCGGCATTTACTGATGTGCCC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTCTATGTCCGAGTAGCTaGCCACCACAGCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLLCPSS*PPQPGR
Trigger: CCTTCCTGGCTGTGGTGGCCAGCTACTCGGACATAG...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAGTACTCGGAATCATCTaGGATGGGGGAAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTVLGII*DGGSLC
Trigger: ACATAGACTTCCCCCATCCCAGATGATTCCGAGTAC...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCCTTAGTCCTCAAGTCTaGCCTCTTTGTGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFLSPQV*PLCEME
Trigger: CTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAG...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGTGCCAGGGTGTGTTGTaGAGGTTAGCAGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRCQGVL*RLADAD
Trigger: ATCAGCATCTGCTAACCTCCACAACACACCCTGGCA...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGTGCGGATGTTGCATGTaGATATTTGGTTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLCGCCM*IFGFPL
Trigger: GAGAGGGAAACCAAATATCCACATGCAACATCCGCA...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGGCTCACCATACAGAATaGGCGAGAGGACTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLAHHTE*ARGLGN
Trigger: ATTTCCCAGTCCTCTCGCCCATTCTGTATGGTGAGC...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCCAGCAATGCAGAAATaGTCCCCTTACCCGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMPAMQK*SPYPFP
Trigger: AGGAAACGGGTAAGGGGACCATTTCTGCATTGCTGG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTGCCAGAGAAGGGAAATaGGCTCAGATTGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLAREGK*AQIGGY
Trigger: GTAGCCTCCAATCTGAGCCCATTTCCCTTCTCTGGC...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTGGTGTAGCCTATCCCTaGATCTGTCCCACTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLGVAYP*ICPTAK
Trigger: TTTGGCAGTGGGACAGATCCAGGGATAGGCTACACC...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTAGGGTCAGGGCAGGGTaGTGTAGCCTATCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLRVRAG*CSLSLD
Trigger: ATCCAGGGATAGGCTACACCACCCTGCCCTGACCCT...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTCCTCCTCCAGGTACTaGACTGGCTCAGAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVSSSRY*TGSELA
Trigger: TGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTAGTCTGGCCTCTTTGTaGAATGGAGGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFSLASL*NGGKEG
Trigger: GCCTTCCTTCCCTCCATTTCACAAAGAGGCCAGACT...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGTTGATGTTAGCAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRLMLAV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTGCTAACATCAA...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCAAGCACCTACCTTGTaGTTGCCCATGTGGTTACCC +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFQAPTL*LPMWLP
Trigger: GGGTAACCACATGGGCAAGCACAAGGTAGGTGCTTG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTTGGTATCACACAGAATaGCAATTACTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: MEGRKASPRTSPMERTKIWYHTE*QLLPLS
Trigger: GGAAAGGGGAAGTAATTGGCATTCTGTGTGATACCA...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCTGGTATCACACAGAATaGCAATTACTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFWYHTE*QLLPLS
Trigger: GGAAAGGGGAAGTAATTGGCATTCTGTGTGATACCA...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDGPRSR*CLLNQP
Trigger: TGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCC...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGAGTGATAAGCCCACATaGGTGGTCTTCCTAGACAAG +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLSDKPT*VVFLDK
Trigger: CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACT...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACACTGGCTCATACTTTaGGGTCCATGGGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGHWLIL*GPWEYV
Trigger: GACATACTCCCATGGACCCCAAAGTATGAGCCAGTG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACTGCTGTTCTCAAATTaGTGCACCATACCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTLLFSN*CTIPSS
Trigger: ACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTAGTCTGGCCTCTTTGTaGAATGGAGGGAAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLSLASL*NGGKEG
Trigger: GCCTTCCTTCCCTCCATTTCACAAAGAGGCCAGACT...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTCAAGCACCTACCTTGTaGTTGCCCATGTGGTTACCC +
Preference number: 4 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSQAPTL*LPMWLP
Trigger: GGGTAACCACATGGGCAAGCACAAGGTAGGTGCTTG...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTGGTGTGGCCTCAAGATaGAGGTCTAGACTGGATAAT +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLGVASR*RSRLDN
Trigger: ATTATCCAGTCTAGACCTGCATCTTGAGGCCACACC...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCGGAATCATCTGGGATaGGGGAAGTCTATGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMRNHLG*GKSMFL
Trigger: AAGAAACATAGACTTCCCCCATCCCAGATGATTCCG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAAGTGATAAGCCCACATaGGTGGTCTTCCTAGACAAG +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGSDKPT*VVFLDK
Trigger: CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACT...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCTTATTGGCAGGAAGTTaGAGTCATTCTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFLLAGS*SHSNKE
Trigger: CTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAA...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTTGCCAGGGTGTGTTGTaGAGGTTAGCAGATGCTGAT +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFCQGVL*RLADAD
Trigger: ATCAGCATCTGCTAACCTCCACAACACACCCTGGCA...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCTGCTGTTCTCAAATTaGTGCACCATACCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMLLFSN*CTIPSS
Trigger: ACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCCCTTACCCGTTTCCTaGACAGAGGAATGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFPLPVS*TEECLL
Trigger: AAGGAGACATTCCTCTGTCCAGGAAACGGGTAAGGG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGAAGCCAAAATCCAAATaGTCTCCTTGGTATCACACA +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLKPKSK*SPWYHT
Trigger: TGTGTGATACCAAGGAGACCATTTGGATTTTGGCTT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCGATGCAGGTCTAGACTaGATAATTGAACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCDAGLD*IIEQSS
Trigger: ACTACTTTGTTCAATTATCCAGTCTAGACCTGCATC...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCCCCACTCACAAGGTTaGCCAAATTTCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGPHSQG*PNFRLQ
Trigger: CTGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACTGGTATATGGGTCTTaGGATATTGATGACTCATTC +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTLVYGS*DIDDSF
Trigger: GAATGAGTCATCAATATCTCAAGACCCATATACCAG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACTTGATGTTAGCAGTTTaGGACCAGCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDLMLAV*DQPGQH
Trigger: ATGTTGGCCAGGCTGGTCTCAAACTGCTAACATCAA...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR TCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGAATGTCTCCTTTCCTTaGAGTCTCCTGCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLNVSFP*SLLQKL
Trigger: TAGCTTTTGCAGGAGACTTCAAGGAAAGGAGACATT...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGAGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTC +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRVTERF*ILFRIL
Trigger: GAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCAC...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCCTTCTGCATCCTTCTaGACAGATGCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGPSASF*TDAGIW
Trigger: CCATATACCAGCATCTGTGCAGAAGGATGCAGAAGG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTAGTGATAAGCCCACATaGGTGGTCTTCCTAGACAAG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGSDKPT*VVFLDK
Trigger: CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACT...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTTGCGGATGTTGCATGTaGATATTTGGTTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLCGCCM*IFGFPL
Trigger: GAGAGGGAAACCAAATATCCACATGCAACATCCGCA...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTCACTGGCTCATACTTTaGGGTCCATGGGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLHWLIL*GPWEYV
Trigger: GACATACTCCCATGGACCCCAAAGTATGAGCCAGTG...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
3UTR CAA 72 bp GTCCATGGGAGTATGTCAAACCTTGACATACTAGATTaGTTGCGGATGTTGCATGTGGATATTTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VHGSMSNLDILD*LRMLHVDIWFP
Trigger: GGGAAACCAAATATCCACATGCAACATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGCTGGTATATGGGTCTTaGGATATTGATGACTCATTC +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLLVYGS*DIDDSF
Trigger: GAATGAGTCATCAATATCTCAAGACCCATATACCAG...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTATAATGGTGGCCACTaGGGTCCCTTAACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLYNGGH*GPLTFP
Trigger: TGGAAAGGTTAAGGGACCTCAGTGGCCACCATTATA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTCCTTCTGCATCCTTCTaGACAGATGCTGGTATATGG +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLPSASF*TDAGIW
Trigger: CCATATACCAGCATCTGTGCAGAAGGATGCAGAAGG...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTGTACTCGGAATCATCTaGGATGGGGGAAGTCTATGT +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLVLGII*DGGSLC
Trigger: ACATAGACTTCCCCCATCCCAGATGATTCCGAGTAC...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCATCCCTCTCACTTTTaGGAATCTTTGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGHPSHF*ESLFPG
Trigger: CCCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAAAAACTAAAAATTCCTaGCAGGTTGTGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTKTKNS*QVVVVH
Trigger: ATGAACCACCACAACCTGCCAGGAATTTTTAGTTTT...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CCA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGAAGCCAAAATCCAAATaGTCTCCTTGGTATCACACA +
Preference number: 4 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMKPKSK*SPWYHT
Trigger: TGTGTGATACCAAGGAGACCATTTGGATTTTGGCTT...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
3UTR CAA 72 bp CATGGGAGTATGTCAAACCTTGACATACTAGATTTGTaGCGGATGTTGCATGTGGATATTTGGTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HGSMSNLDILDL*RMLHVDIWFPS
Trigger: AGAGGGAAACCAAATATCCACATGCAACATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR TCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGAAATGTCTCCTTTCCTTaGAGTCTCCTGCAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRNVSFP*SLLQKL
Trigger: TAGCTTTTGCAGGAGACTTCAAGGAAAGGAGACATT...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACCAAAAAGTACACTGCTaGCACTGTTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDQKVHC*HCCCHL
Trigger: AAGATGGCAACAACAGTGGCAGCAGTGTACTTTTTG...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCAAAAAGTACACTGCTaGCACTGTTGTTGCCATCTT +
Preference number: 4 (lower is better)
Translates to: YMGLEILMTHSHWLILWGQKVHC*HCCCHL
Trigger: AAGATGGCAACAACAGTGGCAGCAGTGTACTTTTTG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGCTAGAACATCTCCTATaGAGAGGACAAAGATTATTG +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLLEHLL*RGQRLL
Trigger: CAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAG...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTGCGGATGTTGCATGTaGATATTTGGTTTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLCGCCM*IFGFPL
Trigger: GAGAGGGAAACCAAATATCCACATGCAACATCCGCA...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTTCCAAATGGTCTCCTTaGTATCACACAGAATGCCAA +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFSKWSP*YHTECQ
Trigger: TTGGCATTCTGTGTGATACCAAGGAGACCATTTGGA...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR GCA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGACAAAATTGTAAATCATaGGGAACTAAAGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGQNCKS*GTKGRD
Trigger: GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTG...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACTTATTGGCAGGAAGTTaGAGTCATTCTAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDLLAGS*SHSNKE
Trigger: CTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAA...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTCTAGAACATCTCCTATaGAGAGGACAAAGATTATTG +
Preference number: 4 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLLEHLL*RGQRLL
Trigger: CAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAG...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACATTTGTTGCGGATGTTaGATGTGGATATTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDICCGC*MWIFGF
Trigger: GAAACCAAATATCCACATGCAACATCCGCAACAAAT...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTAGAACATCTCCTATaGAGAGGACAAAGATTATTG +
Preference number: 4 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRLEHLL*RGQRLL
Trigger: CAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAG...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACCTAGAACATCTCCTATaGAGAGGACAAAGATTATTG +
Preference number: 4 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDLEHLL*RGQRLL
Trigger: CAATAATCTTTGTCCTCTCCATAGGAGATGTTCTAG...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTTGCATGTGGATATTTaGTTTCCCTCTCTTACTTGC +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVLHVDI*FPSLTC
Trigger: GCAAGTAAGAGAGGGAAACCAAATATCCACATGCAA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTTTGCTAAGTATTATCTaGAGACTATGTACTCGGAAT +
Preference number: 4 (lower is better)
Translates to: TRRLITGFKEDISQQCCFLLSII*RLCTRN
Trigger: ATTCCGAGTACATAGTCTGCAGATAATACTTAGCAA...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR GCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTATTTGTTGCGGATGTTaGATGTGGATATTTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSICCGC*MWIFGF
Trigger: GAAACCAAATATCCACATGCAACATCCGCAACAAAT...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTCAAAATTGTAAATCATaGGGAACTAAAGGACGTGAC +
Preference number: 4 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSQNCKS*GTKGRD
Trigger: GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTG...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CCA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTAAAACTAAAAATTCCTaGCAGGTTGTGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVKTKNS*QVVVVH
Trigger: ATGAACCACCACAACCTGCCAGGAATTTTTAGTTTT...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CCA 90 bp TCGGAAGGGCCGGGCTCCAGAGCGGCGGGGCCGCTCCTAGCGGTCTaGCCCAGGCTGCCCCCGCGGCGCGTGCTGGACGCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SEGPGSRAAGPLLAV*PRLPPRRVLDASEP
Trigger: GGGCTCCGAGGCGTCCAGCACGCGCCGCGGGGGCAGCCTGGGCCAGACCGCTAGGAGCGGCCCCGCCGCTCTGGAGCCCGGCCCTTCCGA
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 90 bp GGCCCAGGCTGCCCCCGCGGCGCGTGCTGGACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGACGAAGCCCACGCCCGCCGAGCGCA +
Preference number: 5 (lower is better)
Translates to: GPGCPRGACWTPRSP*PPAAWRRSPRPPSA
Trigger: TGCGCTCGGCGGGCGTGGGCTTCGTCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGTCCAGCACGCGCCGCGGGGGCAGCCTGGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 90 bp CGGGCCAGGCTCAGCCGCTTCCCCACGAGCCCTAACCCGGCGGCCTaGCCGGCCAGCGCGCGGCCCGCCTCAGCCAGGTTCACCACGTGG +
Preference number: 5 (lower is better)
Translates to: RARLSRFPTSPNPAA*PASARPASARFTTW
Trigger: CCACGTGGTGAACCTGGCTGAGGCGGGCCGCGCGCTGGCCGGCCAGGCCGCCGGGTTAGGGCTCGTGGGGAAGCGGCTGAGCCTGGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 90 bp ACAACACCCAGATGCCTGCCAGCACCCGCCGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAAAGGGGCGGGCCACCGCCAGTGAGC +
Preference number: 5 (lower is better)
Translates to: TTPRCLPAPAGPSPW*VASGTQRGGPPPVS
Trigger: GCTCACTGGCGGTGGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 90 bp AGGACAACACCCAGATGCCTGCCAGCACCCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACACAAAGGGGCGGGCCACCGCCAGTG +
Preference number: 5 (lower is better)
Translates to: RTTPRCLPAPAGPSP*CVASGTQRGGPPPV
Trigger: CACTGGCGGTGGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 90 bp GGTACGCGAGGACGGGTGTGGCCAGCAGAAAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGGCCATCGCCTTGGTGCGTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: GTRGRVWPAERTTPR*LPAPAGPSPWCVAS
Trigger: AGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 90 bp GCCAGGAAGGGCAGCAGGAAGCCCGTGACAGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCGCTGGGGTACCGCGGGAAGCACAGG +
Preference number: 5 (lower is better)
Translates to: ARKGSRKPVTASKIR*KARCPSLGYRGKHR
Trigger: CCTGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGCCCTTCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLSAMST*RARLSR
Trigger: GCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTCGCCGGGCCATCGCCTaGGTGCGTAGCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLRRAIA*VRSFWD
Trigger: GTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCG...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLSAMST*RARLSR
Trigger: GCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACT...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LPVGARLEHALTRPSLCSHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 90 bp TGTTCGTTTTCCAGGGCACTACTGTGCGGTACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACACCCAGATGCCTGCCAGCACCCGCC +
Preference number: 5 (lower is better)
Translates to: CSFSRALLCGTRGRV*PAERTTPRCLPAPA
Trigger: GGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGAAAACGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 90 bp CTGATGCCAATCCCAGGGTCAGGGCAGGGTGGTGTAGCCTATCCCTaGATCTGTCCCACTGCCAAAGGCCTGGCCCCAGGTCTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LMPIPGSGQGGVAYP*ICPTAKGLAPGLGA
Trigger: AGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAGGGATAGGCTACACCACCCTGCCCTGACCCTGGGATTGGCATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTCACACCACAAAGCTGTaGCCGGGAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLHTTKL*PGSPTA
Trigger: GGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGTG...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS GCA 90 bp ACCGCGGGAAGCACAGGCTCATGTTCGTTTTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTGTGGCCAGCAGAAAGGACAACACCC +
Preference number: 5 (lower is better)
Translates to: TAGSTGSCSFSRALL*GTRGRVWPAERTTP
Trigger: GGGTGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGAAAACGAACATGAGCCTGTGCTTCCCGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 90 bp AGCAGGAAGCCCGTGACAGCCTCGAAGATTAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGCGGGAAGCACAGGCTCATGTTCGTT +
Preference number: 5 (lower is better)
Translates to: SRKPVTASKIRWKAR*PSLGYRGKHRLMFV
Trigger: AACGAACATGAGCCTGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGCGCCGGGCCATCGCCTaGGTGCGTAGCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VLMVKAACGSQAGARSHSRRAIA*VRSFWD
Trigger: GTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCG...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCGCCGGGCCATCGCCTaGGTGCGTAGCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: VLNWLRASILPGGKCASFRRAIA*VRSFWD
Trigger: GTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VLNWLRASILPGGKCASFSAMST*RARLSR
Trigger: GCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACT...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LLLQVLNWLRASILPGGKSAMST*RARLSR
Trigger: GCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACT...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCATTCCAGAGCCCCCACTaGTTCTGCTTGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSFQSPH*FCLEKS
Trigger: GCTTTTCTCCAAGCAGAACAAGTGGGGGCTCTGGAA...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCTTTAGACACACAAAGTaGAGGCCGAGCTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LPVGARLEHALTRPSLCSFRHTK*RPSWQA
Trigger: AGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAAA...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS TCA 90 bp ACAAAGTTGAGGCCGAGCTGGCAGGCTGAGCATGAGGAGCAGGAGTaGGGGAGCAGGAACAGTGATGCCTCATGCCCACCCTGCCAAGAG +
Preference number: 5 (lower is better)
Translates to: TKLRPSWQAEHEEQE*GSRNSDASCPPCQE
Trigger: CTCTTGGCAGGGTGGGCATGAGGCATCACTGTTCCTGCTCCCTCACTCCTGCTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCCACACCACAAAGCTGTaGCCGGGAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LQVLNWLRASILPGGKCAHTTKL*PGSPTA
Trigger: GGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGTG...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCATTCAGTTCGTTTAACTaGAGAGGGCTGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSFSSFN*RGLEAV
Trigger: CACTGCCTCCAGCCCTCTCAAGTTAAACGAACTGAA...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS GCA 90 bp AGGGTCAGGGCAGGGTGGTGTAGCCTATCCCTGGATCTGTCCCACTaGCAAAGGCCTGGCCCCAGGTCTAGGTGCTGTTTGCTAAATCAG +
Preference number: 5 (lower is better)
Translates to: RVRAGWCSLSLDLSH*QRPGPRSRCCLLNQ
Trigger: CTGATTTAGCAAACAGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAGGGATAGGCTACACCACCCTGCCCTGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CAA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGCACACCACAAAGCTGTaGCCGGGAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LLLQVLNWLRASILPGGKHTTKL*PGSPTA
Trigger: GGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGTG...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGACACTTTTGGGAATCTTaGTTTCCTGGGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRHFWES*FPGALS
Trigger: GCTGAGGGCCCCAGGAAACAAAGATTCCCAAAAGTG...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS GCA 90 bp GCCAGGGCCAGGTTCAGCACCATCAGGGCAGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTCCACACCACAAAGCTGTTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: ARARFSTIRAVTERF*ILFRILHTTKLLPG
Trigger: TCCCGGCAACAGCTTTGTGGTGTGGAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGCTGAACCTGGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000553481.1
ENST00000645335.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGTTCAGTTCGTTTAACTaGAGAGGGCTGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLFSSFN*RGLEAV
Trigger: CACTGCCTCCAGCCCTCTCAAGTTAAACGAACTGAA...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LLLQVLNWLRASILPGGKHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCAACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCCATCCAACATCCCTTaGCTTCCTTCTGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLPSNIP*LPSASF
Trigger: GAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGG...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGAGGTCTAGGTGCTGTTaGCTAAATCAGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLRSRCC*LNQPER
Trigger: CCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS GCA 90 bp TCCCTGGATCTGTCCCACTGCCAAAGGCCTGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCAGAGAGGAAGTACCACAGAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SLDLSHCQRPGPRSR*CLLNQPERKYHRAE
Trigger: CTCTGCTCTGTGGTACTTCCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CAA 90 bp ATGGAGGGAAGGAAGGCATCCCCTAGAACATCTCCTATGGAGAGGACAAAGATTAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: MEGRKASPRTSPMERTKISAMST*RARLSR
Trigger: GCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACT...AATCTTTGTCCTCTCCATAGGAGATGTTCTAGGGGATGCCTTCCTTCCCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGCTCCAGAGGACAAAGATTATaGGCAGGAAGTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: LPVGARLEHALTRPSLCSRGQRL*AGSWSH
Trigger: ATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCT...GGAGCAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCCACCAGGGCGCCCACGAGCACCCCGATACCCACAGCACATGTACCCCACTCAGTTGCATGTGGATATTaGGTTTCCCTCTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: PTRAPTSTPIPTAHVPHSVACGY*VSLSYL
Trigger: CAAGTAAGAGAGGGAAACCAAATATCCACATGCAAC...TGAGTGGGGTACATGTGCTGTGGGTATCGGGGTGCTCGTGGGCGCCCTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTCCCCAAGCACCTACCTaGTGCTTGCCCATGTGGTTA +
Preference number: 5 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSPQAPT*CLPMWL
Trigger: TAACCACATGGGCAAGCACAAGGTAGGTGCTTGGGG...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CCA 90 bp GCCTCATGCCCACCCTGCCAAGAGGGGAAACCAGCAATGCAGAAATaGTCCCCTTACCCGTTTCCTGGACAGAGGAATGTCTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: ASCPPCQEGKPAMQK*SPYPFPGQRNVSFP
Trigger: AGGAAAGGAGACATTCCTCTGTCCAGGAAACGGGTAAGGGGACCATTTCTGCATTGCTGGTTTCCCCTCTTGGCAGGGTGGGCATGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCCTGTGCCAGGGTGTGTaGTGGAGGTTAGCAGATGCT +
Preference number: 5 (lower is better)
Translates to: VLNWLRASILPGGKCASFLCQGV*WRLADA
Trigger: AGCATCTGCTAACCTCCACAACACACCCTGGCACAG...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGCTGTGCCAGGGTGTGTaGTGGAGGTTAGCAGATGCT +
Preference number: 5 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKLCQGV*WRLADA
Trigger: AGCATCTGCTAACCTCCACAACACACCCTGGCACAG...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTTCCAGAGCCCCCACTaGTTCTGCTTGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LQVLNWLRASILPGGKCAFQSPH*FCLEKS
Trigger: GCTTTTCTCCAAGCAGAACAAGTGGGGGCTCTGGAA...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCTCGGGAGGACAAGCTTaGGCAGGAACTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLQVLNWLRASILPGGKCSGGQA*AGTGWK
Trigger: CTTCCAACCAGTTCCTGCCAAAGCTTGTCCTCCCGA...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396782.2
ENST00000646739.1
CDS-3UTR CAA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCTCGGGAGGACAAGCTTaGGCAGGAACTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: VLNWLRASILPGGKCASFSGGQA*AGTGWK
Trigger: CTTCCAACCAGTTCCTGCCAAAGCTTGTCCTCCCGA...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396782.2
ENST00000646739.1
CDS GCA 90 bp ACAGTGATGCCTCATGCCCACCCTGCCAAGAGGGGAAACCAGCAATaGAGAAATGGTCCCCTTACCCGTTTCCTGGACAGAGGAATGTCT +
Preference number: 5 (lower is better)
Translates to: TVMPHAHPAKRGNQQ*RNGPLTRFLDRGMS
Trigger: AGACATTCCTCTGTCCAGGAAACGGGTAAGGGGACCATTTCTGCATTGCTGGTTTCCCCTCTTGGCAGGGTGGGCATGAGGCATCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CCA 90 bp CCACTGAGGTCCCTTAACCTTTCCAGAGCCCCCACTTGTTCTGCTTaGAGAAAAGCCAGAGCAGAGATGACCTCGCAGCTGTCAGAGGAT +
Preference number: 5 (lower is better)
Translates to: PLRSLNLSRAPTCSA*RKARAEMTSQLSED
Trigger: ATCCTCTGACAGCTGCGAGGTCATCTCTGCTCTGGCTTTTCTCCAAGCAGAACAAGTGGGGGCTCTGGAAAGGTTAAGGGACCTCAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp TTTGGGGTCCATGGGAGTATGTCAAACCTTGACATACTAGATTTGTTGCGGATGCGCCGGGCCATCGCCTaGGTGCGTAGCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FGVHGSMSNLDILDLLRMRRAIA*VRSFWD
Trigger: GTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCG...CATCCGCAACAAATCTAGTATGTCAAGGTTTGACATACTCCCATGGACCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp AAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTGAGAGGACAAAGATTATaGGCAGGAAGTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: KAACGSQAGARSHSALTLRGQRL*AGSWSH
Trigger: ATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCT...CAAAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCCACTTTTGGGAATCTTaGTTTCCTGGGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LLQVLNWLRASILPGGKCHFWES*FPGALS
Trigger: GCTGAGGGCCCCAGGAAACAAAGATTCCCAAAAGTG...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGAGTTGCATGTGGATATTaGGTTTCCCTCTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRVACGY*VSLSYL
Trigger: CAAGTAAGAGAGGGAAACCAAATATCCACATGCAAC...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCAGAAGGTCCCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCACTGGCTCATACTTaGGGGTCCATGGGAGTATGT +
Preference number: 5 (lower is better)
Translates to: LRRSRVTEPGVISPHGWSSLAHT*GSMGVC
Trigger: ACATACTCCCATGGACCCCAAAGTATGAGCCAGTGA...AGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGGGACCTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTGAATGTCTCCTTTCCTaGAAGTCTCCTGCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLECLLS*KSPAKA
Trigger: AGCTTTTGCAGGAGACTTCAAGGAAAGGAGACATTC...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGGCAGCACTCTGTCCTaGGCTTCAGTTCAAGCTATG +
Preference number: 5 (lower is better)
Translates to: LLLQVLNWLRASILPGGKGSTLS*ASVQAM
Trigger: CATAGCTTGAACTGAAGCCAAGGACAGAGTGCTGCC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCAGGTCTAGGTGCTGTTaGCTAAATCAGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LQVLNWLRASILPGGKCARSRCC*LNQPER
Trigger: CCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCT...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CAA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACACACCACAAAGCTGTaGCCGGGAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTHTTKL*PGSPTA
Trigger: GGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGTG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCTTCAGTTCGTTTAACTaGAGAGGGCTGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: LLQVLNWLRASILPGGKCFSSFN*RGLEAV
Trigger: CACTGCCTCCAGCCCTCTCAAGTTAAACGAACTGAA...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCTCCTTCTTCAGTTCGTTTAACTaGAGAGGGCTGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: VLNWLRASILPGGKCASFFSSFN*RGLEAV
Trigger: CACTGCCTCCAGCCCTCTCAAGTTAAACGAACTGAA...GAAGGAGGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTAAAGGACGTGACTCTCAACTACCGAGAGGGGCCCCACCAGGGCGCCCACGATCTGTAGACTGCGTTTaGCTAAGTATTATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TKGRDSQLPRGAPPGRPRSVDCV*LSIICR
Trigger: TCTGCAGATAATACTTAGCAAAACGCAGTCTACAGA...TCGTGGGCGCCCTGGTGGGGCCCCTCTCGGTAGTTGAGAGTCACGTCCTTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTTAATGGTTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGAGGTCTAGGTGCTGTTaGCTAAATCAGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: VLMVKAACGSQAGARSHSRSRCC*LNQPER
Trigger: CCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCT...CGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAACCATTAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS-3UTR CAA 90 bp CTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGAGGACTTACAAGCTTaGGCAGGAACTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LLQVLNWLRASILPGGKCEDLQA*AGTGWK
Trigger: CTTCCAACCAGTTCCTGCCAAAGCTTGTAAGTCCTC...GCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS TCA 90 bp TCTTCTCACAGCCTACTATTCAGTTCCACTTTAGACACACAAAGTTaGGGCCGAGCTGGCAGGCTGAGCATGAGGAGCAGGAGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SSHSLLFSSTLDTQS*GRAGRLSMRSRSEG
Trigger: TCCCTCACTCCTGCTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAAAGTGGAACTGAATAGTAGGCTGTGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACACACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTTCTGTAGACTGCGTTTaGCTAAGTATTATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLSVDCV*LSIICR
Trigger: TCTGCAGATAATACTTAGCAAAACGCAGTCTACAGA...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGATCTGGGCAAGGAGATaGGCACTACCTCTTTCCTAT +
Preference number: 5 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKIWARR*ALPLSY
Trigger: ATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGAT...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCCCCCAAGCACCTACCTaGTGCTTGCCCATGTGGTTA +
Preference number: 5 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCPQAPT*CLPMWL
Trigger: TAACCACATGGGCAAGCACAAGGTAGGTGCTTGGGG...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS TCA 90 bp TTTCCCCAAGCACCTACCTTGTGCTTGCCCATGTGGTTACCCTGCTaGGTCTGGATTTATGATCTGGGCAAGGAGATTGGCACTACCTCT +
Preference number: 5 (lower is better)
Translates to: FPQAPTLCLPMWLPC*VWIYDLGKEIGTTS
Trigger: AGAGGTAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGGGTAACCACATGGGCAAGCACAAGGTAGGTGCTTGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTCGCCGGGCCATCGCCTaGGTGCGTAGCTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVRRAIA*VRSFWD
Trigger: GTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCG...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TTAAAGCTGCCTGTGGGAGCCAGGCTGGAGCACGCTCTCACTCGGCCCTCACTTGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 5 (lower is better)
Translates to: LKLPVGARLEHALTRPSLEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...AAGTGAGGGCCGAGTGAGAGCGTGCTCCAGCCTGGCTCCCACAGGCAGCTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCGGGTCACAGAACCTGGAGTGATAAGCCCACATGGGTGGTCTTCCTAGACAAGTCATCCCTCTCACTTTaGGGAATCTTTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGHRTWSDKPTWVVFLDKSSLSL*GIFVSW
Trigger: CCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATGA...CTTGTCTAGGAAGACCACCCATGTGGGCTTATCACTCCAGGTTCTGTGACCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGTGCGCCGTTGCATGTGGATATTaGGTTTCCCTCTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: LQVLNWLRASILPGGKCAVACGY*VSLSYL
Trigger: CAAGTAAGAGAGGGAAACCAAATATCCACATGCAAC...GGCGCACTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS CCA 90 bp TGTGCTTGCCCATGTGGTTACCCTGCTGAGTCTGGATTTATGATCTaGGCAAGGAGATTGGCACTACCTCTTTCCTATCTTCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: CACPCGYPAESGFMI*ARRLALPLSYLLTA
Trigger: GGCTGTGAGAAGATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGGGTAACCACATGGGCAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACCACACCACAAAGCTGTaGCCGGGAAGCCCCACAGCC +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDHTTKL*PGSPTA
Trigger: GGCTGTGGGGCTTCCCGGCAACAGCTTTGTGGTGTG...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCCACTTTTGGGAATCTTaGTTTCCTGGGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFHFWES*FPGALS
Trigger: GCTGAGGGCCCCAGGAAACAAAGATTCCCAAAAGTG...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGGCACCTACCTTGTGCTaGCCCATGTGGTTACCCTGC +
Preference number: 5 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLAPTLC*PMWLPC
Trigger: GCAGGGTAACCACATGGGCAAGCACAAGGTAGGTGC...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTCCTCTTCTTAGGTCCATCCAACATCCCTTTGCTTCCTTCTGCATCCTTCTGCAGGTCTAGGTGCTGTTaGCTAAATCAGCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LLFLGPSNIPLLPSASFCRSRCC*LNQPER
Trigger: CCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCT...GCAGAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGGACCTAAGAAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACATTCAGTTCGTTTAACTaGAGAGGGCTGGAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTFSSFN*RGLEAV
Trigger: CACTGCCTCCAGCCCTCTCAAGTTAAACGAACTGAA...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTCACTCGGCCCTCACTTaGCTCCACCTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLHSALT*LHLSLF
Trigger: GAAGAGGGAGAGGTGGAGCAAAGTGAGGGCCGAGTG...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTCCTCCTCCAGGTACTGAACTGGCTCAGAGCTAGCATTCTGCCAGGAGGAAAGGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 5 (lower is better)
Translates to: LLLQVLNWLRASILPGGKEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...CTTTCCTCCTGGCAGAATGCTAGCTCTGAGCCAGTTCAGTACCTGGAGGAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTCTGTGCCAGGGTGTGTaGTGGAGGTTAGCAGATGCT +
Preference number: 5 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLLCQGV*WRLADA
Trigger: AGCATCTGCTAACCTCCACAACACACCCTGGCACAG...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGCACTTTTGGGAATCTTaGTTTCCTGGGGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRHFWES*FPGALS
Trigger: GCTGAGGGCCCCAGGAAACAAAGATTCCCAAAAGTG...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGATCTGGGCAAGGAGATaGGCACTACCTCTTTCCTAT +
Preference number: 5 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLIWARR*ALPLSY
Trigger: ATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGAT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTGCACCTACCTTGTGCTaGCCCATGTGGTTACCCTGC +
Preference number: 5 (lower is better)
Translates to: YMGLEILMTHSHWLILWGAPTLC*PMWLPC
Trigger: GCAGGGTAACCACATGGGCAAGCACAAGGTAGGTGC...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGTCACTGGCTCATACTTaGGGGTCCATGGGAGTATGT +
Preference number: 5 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLSLAHT*GSMGVC
Trigger: ACATACTCCCATGGACCCCAAAGTATGAGCCAGTGA...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGCCATCCAACATCCCTTaGCTTCCTTCTGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWRPSNIP*LPSASF
Trigger: GAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGG...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGGTGCACCATACCTTCCAGTAAGTCTGTAGACTGCGTTTaGCTAAGTATTATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PSQFQLLFSNWCTIPSSKSVDCV*LSIICR
Trigger: TCTGCAGATAATACTTAGCAAAACGCAGTCTACAGA...CTTACTGGAAGGTATGGTGCACCAATTTGAGAACAGCAGCTGAAACTGGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACTGGGAAATACTCCGTTAGGTCCCTCCCAGTTTCAGCTGCTGTTCTCAAATTGATGGGTCTTGAGATATaGATGACTCATTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: TGKYSVRSLPVSAAVLKLMGLEI*MTHSHW
Trigger: CCAGTGAGAATGAGTCATCAATATCTCAAGACCCAT...CAATTTGAGAACAGCAGCTGAAACTGGGAGGGACCTAACGGAGTATTTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAGAGGACTTACAAGCTTaGGCAGGAACTGGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGEDLQA*AGTGWK
Trigger: CTTCCAACCAGTTCCTGCCAAAGCTTGTAAGTCCTC...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACCCATCCAACATCCCTTaGCTTCCTTCTGCATCCTTC +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDPSNIP*LPSASF
Trigger: GAAGGATGCAGAAGGAAGCAAAGGGATGTTGGATGG...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TGTAGACTGCGTTTTGCTAAGTATTATCTGCAGACTATGTACTCGGAATCATCTTTTAGACACACAAAGTaGAGGCCGAGCTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: CRLRFAKYYLQTMYSESSFRHTK*RPSWQA
Trigger: AGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAAA...AGATGATTCCGAGTACATAGTCTGCAGATAATACTTAGCAAAACGCAGTCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTGGCAGCACTCTGTCCTaGGCTTCAGTTCAAGCTATG +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVGSTLS*ASVQAM
Trigger: CATAGCTTGAACTGAAGCCAAGGACAGAGTGCTGCC...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAGGAAATGGGCTCAGATaGGAGGCTACAATGCTGATA +
Preference number: 5 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGGNGLR*EATMLI
Trigger: TATCAGCATTGTAGCCTCCAATCTGAGCCCATTTCC...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GGAATCATCTGGGATGGGGGAAGTCTATGTTTCTTTGTGTCCCTTCCAAAATTGCTTGTCAGAACAGAGTaGGACCAAGGTTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: GIIWDGGSLCFFVSLPKLLVRTE*DQGSLK
Trigger: TTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG...CAATTTTGGAAGGGACACAAAGAAACATAGACTTCCCCCATCCCAGATGATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTCACTGGCTCATACTTaGGGGTCCATGGGAGTATGT +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVSLAHT*GSMGVC
Trigger: ACATACTCCCATGGACCCCAAAGTATGAGCCAGTGA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CGATACCCACAGCACATGTACCCCACTCACAAGGTTGACCAAATTTCAGACTTCAATTCTCCATTCTCTTaGGTAGAAGCCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: RYPQHMYPTHKVDQISDFNSPFS*VEAKIQ
Trigger: TTGGATTTTGGCTTCTACCAAAGAGAATGGAGAATT...GAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGTACATGTGCTGTGGGTATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACGGAAATGGGCTCAGATaGGAGGCTACAATGCTGATA +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDGNGLR*EATMLI
Trigger: TATCAGCATTGTAGCCTCCAATCTGAGCCCATTTCC...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp TCATTCTCACTGGCTCATACTTTGGGGTCCATGGGAGTATGTCAAACCTTGACAGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 5 (lower is better)
Translates to: SFSLAHTLGSMGVCQTLTEVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...TGTCAAGGTTTGACATACTCCCATGGACCCCAAAGTATGAGCCAGTGAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CTTGTCAGAACAGAGTTGGACCAAGGTTCTCTAAAACAACAGTCATCTCTAGGAAGAGGACAAAGATTATaGGCAGGAAGTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: LVRTELDQGSLKQQSSLGRGQRL*AGSWSH
Trigger: ATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCT...TCCTAGAGATGACTGTTGTTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACTCATCCCTCTCACTTTaGGGAATCTTTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDSSLSL*GIFVSW
Trigger: CCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATGA...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGACTTATGGGTCTTGAGATATaGATGACTCATTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: GEDKDYWQEVGVILTRRLMGLEI*MTHSHW
Trigger: CCAGTGAGAATGAGTCATCAATATCTCAAGACCCAT...AAGTCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp ACAAGGAGACTTATCACAGGCTTCAAGGAAGATATTTCACAGCAGTGCTGTTTTGAATGTCTCCTTTCCTaGAAGTCTCCTGCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: TRRLITGFKEDISQQCCFECLLS*KSPAKA
Trigger: AGCTTTTGCAGGAGACTTCAAGGAAAGGAGACATTC...AAAACAGCACTGCTGTGAAATATCTTCCTTGAAGCCTGTGATAAGTCTCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS-3UTR CAA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTACCCCACTCACAAGGTaGACCAAATTTCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLTPLTR*TKFQTS
Trigger: TGAAGTCTGAAATTTGGTCAACCTTGTGAGTGGGGT...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGGATAAGATCTAATGACTTAGTCCTCAAGTCTGGCCTCTTTGTGAAATGGAGGGAAGTCTATGTTTCTTaGTGTCCCTTCCAAAATTGT +
Preference number: 5 (lower is better)
Translates to: GIRSNDLVLKSGLFVKWREVYVS*CPFQNC
Trigger: ACAATTTTGGAAGGGACACAAAGAAACATAGACTTC...CCTCCATTTCACAAAGAGGCCAGACTTGAGGACTAAGTCATTAGATCTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACAGAGGACAAAGATTATaGGCAGGAAGTTGGAGTCAT +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDRGQRL*AGSWSH
Trigger: ATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCT...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTTCATCCCTCTCACTTTaGGGAATCTTTGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVSSLSL*GIFVSW
Trigger: CCAGGAAACAAAGATTCCCAAAAGTGAGAGGGATGA...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACCTTGTCAGAACAGAGTaGGACCAAGGTTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDLVRTE*DQGSLK
Trigger: TTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TATATGGGTCTTGAGATATTGATGACTCATTCTCACTGGCTCATACTTTGGGGTCTTGTCAGAACAGAGTaGGACCAAGGTTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: YMGLEILMTHSHWLILWGLVRTE*DQGSLK
Trigger: TTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG...ACCCCAAAGTATGAGCCAGTGAGAATGAGTCATCAATATCTCAAGACCCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GTTTCTTTGTGTCCCTTCCAAAATTGTAAATCATGGGGAACTAAAGGACGTGACATGGGTCTTGAGATATaGATGACTCATTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: VSLCPFQNCKSWGTKGRDMGLEI*MTHSHW
Trigger: CCAGTGAGAATGAGTCATCAATATCTCAAGACCCAT...GTCACGTCCTTTAGTTCCCCATGATTTACAATTTTGGAAGGGACACAAAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp TATGGAGAGGACAAAGATTATTGGCAGGAAGTTGGAGTCATTCTAACAAGGAGATCTGTAGACTGCGTTTaGCTAAGTATTATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: YGEDKDYWQEVGVILTRRSVDCV*LSIICR
Trigger: TCTGCAGATAATACTTAGCAAAACGCAGTCTACAGA...TCTCCTTGTTAGAATGACTCCAACTTCCTGCCAATAATCTTTGTCCTCTCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTCTTGTCAGAACAGAGTaGGACCAAGGTTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVLVRTE*DQGSLK
Trigger: TTTTAGAGAACCTTGGTCCAACTCTGTTCTGACAAG...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTGTTGCATGTGGATATTaGGTTTCCCTCTCTTACTTG +
Preference number: 5 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLVACGY*VSLSYL
Trigger: CAAGTAAGAGAGGGAAACCAAATATCCACATGCAAC...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp CAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTTTGGGAATCTTTGTTATGGGTCTTGAGATATaGATGACTCATTCTCACTGG +
Preference number: 5 (lower is better)
Translates to: QSSLGNNDSSLSLLGIFVMGLEI*MTHSHW
Trigger: CCAGTGAGAATGAGTCATCAATATCTCAAGACCCAT...AACAAAGATTCCCAAAAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000345363.8
ENST00000396789.4
ENST00000646659.1
ENST00000647085.2
CDS-3UTR CAA 90 bp GGTTCTCTAAAACAACAGTCATCTCTAGGAAATAATGACTCATCCCTCTCACTTAATTCTCCATTCTCTTaGGTAGAAGCCAAAATCCAA +
Preference number: 5 (lower is better)
Translates to: GSLKQQSSLGNNDSSLSLNSPFS*VEAKIQ
Trigger: TTGGATTTTGGCTTCTACCAAAGAGAATGGAGAATT...AAGTGAGAGGGATGAGTCATTATTTCCTAGAGATGACTGTTGTTTTAGAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS GCA 72 bp TGCCCCCGCGGCGCGTGCTGGACGCCTCGGAGCCCGTaGCCTCCAGCAGCTTGGCGACGAAGCCCACGCCCG +
Preference number: 6 (lower is better)
Translates to: CPRGACWTPRSP*PPAAWRRSPRP
Trigger: CGGGCGTGGGCTTCGTCGCCAAGCTGCTGGAGGGCACGGGCTCCGAGGCGTCCAGCACGCGCCGCGGGGGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp CTCAGCCGCTTCCCCACGAGCCCTAACCCGGCGGCCTaGCCGGCCAGCGCGCGGCCCGCCTCAGCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: LSRFPTSPNPAA*PASARPASARF
Trigger: GAACCTGGCTGAGGCGGGCCGCGCGCTGGCCGGCCAGGCCGCCGGGTTAGGGCTCGTGGGGAAGCGGCTGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp AGCACCCGCCGGGCCATCGCCTTGGTGCGTAGCTTCTaGGACACAAAGGGGCGGGCCACCGCCAGTGAGCGG +
Preference number: 6 (lower is better)
Translates to: STRRAIALVRSF*DTKGRATASER
Trigger: CCGCTCACTGGCGGTGGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CAA 90 bp ACGGGGTTCACGCTGCTGCTCAGGAAGGCGAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGCTTCCCCACGAGCCCTAACCCGGCG +
Preference number: 6 (lower is better)
Translates to: TGFTLLLRKASAMST*RARLSRFPTSPNPA
Trigger: CGCCGGGTTAGGGCTCGTGGGGAAGCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 72 bp AGATGCCTGCCAGCACCCGCCGGGCCATCGCCTTGGTaGGTAGCTTCTGGGACACAAAGGGGCGGGCCACCG +
Preference number: 6 (lower is better)
Translates to: RCLPAPAGPSPW*VASGTQRGGPP
Trigger: CGGTGGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp CCCAGATGCCTGCCAGCACCCGCCGGGCCATCGCCTTaGTGCGTAGCTTCTGGGACACAAAGGGGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: PRCLPAPAGPSP*CVASGTQRGGP
Trigger: TGGCCCGCCCCTTTGTGTCCCAGAAGCTACGCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS TCA 72 bp CGGGGTTCACGCTGCTGCTCAGGAAGGCGAGTGCGATaGGCACGTTGCGGGCCAGGCTCAGCCGCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: RGSRCCSGRRVR*ARCGPGSAASP
Trigger: TGGGGAAGCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGCAGCAGCGTGAACCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 72 bp GGACGGGTGTGGCCAGCAGAAAGGACAACACCCAGATaGCTGCCAGCACCCGCCGGGCCATCGCCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: GRVWPAERTTPR*LPAPAGPSPWC
Trigger: GCACCAAGGCGATGGCCCGGCGGGTGCTGGCAGGCATCTGGGTGTTGTCCTTTCTGCTGGCCACACCCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CAA 72 bp ACGCTGCTGCTCAGGAAGGCGAGTGCGATGAGCACGTaGCGGGCCAGGCTCAGCCGCTTCCCCACGAGCCCT +
Preference number: 6 (lower is better)
Translates to: TLLLRKASAMST*RARLSRFPTSP
Trigger: AGGGCTCGTGGGGAAGCGGCTGAGCCTGGCCCGCAACGTGCTCATCGCACTCGCCTTCCTGAGCAGCAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp GGCAGCAGGAAGCCCGTGACAGCCTCGAAGATTAGATaGAAGGCCCGGTGCCCTTCGCTGGGGTACCGCGGG +
Preference number: 6 (lower is better)
Translates to: GSRKPVTASKIR*KARCPSLGYRG
Trigger: CCCGCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGCTGTCACGGGCTTCCTGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 72 bp CCCGTGACAGCCTCGAAGATTAGATGGAAGGCCCGGTaGCCTTCGCTGGGGTACCGCGGGAAGCACAGGCTC +
Preference number: 6 (lower is better)
Translates to: PVTASKIRWKAR*PSLGYRGKHRL
Trigger: GAGCCTGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGGCTGTCACGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp ATCCCAGGGTCAGGGCAGGGTGGTGTAGCCTATCCCTaGATCTGTCCCACTGCCAAAGGCCTGGCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: IPGSGQGGVAYP*ICPTAKGLAPG
Trigger: ACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAGGGATAGGCTACACCACCCTGCCCTGACCCTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS CCA 72 bp TCCAGGGCACTACTGTGCGGTACGCGAGGACGGGTGTaGCCAGCAGAAAGGACAACACCCAGATGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: SRALLCGTRGRV*PAERTTPRCLP
Trigger: TGGCAGGCATCTGGGTGTTGTCCTTTCTGCTGGCCACACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 72 bp GCAGGGTGGTGTAGCCTATCCCTGGATCTGTCCCACTaGCAAAGGCCTGGCCCCAGGTCTAGGTGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: AGWCSLSLDLSH*QRPGPRSRCCL
Trigger: CAAACAGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATCCAGGGATAGGCTACACCACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS TCA 72 bp GGTCGGCCAGGGCCAGGTTCAGCACCATCAGGGCAGTaGCAGAGCGCTTCTGCATCCTTTTCAGGATACTCC +
Preference number: 6 (lower is better)
Translates to: GRPGPGSAPSGQ*QSASASFSGYS
Trigger: GGAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGCTGAACCTGGCCCTGGCCGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000553481.1
ENST00000645335.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS GCA 72 bp AGCACAGGCTCATGTTCGTTTTCCAGGGCACTACTGTaGGGTACGCGAGGACGGGTGTGGCCAGCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: STGSCSFSRALL*GTRGRVWPAER
Trigger: CCTTTCTGCTGGCCACACCCGTCCTCGCGTACCGCACAGTAGTGCCCTGGAAAACGAACATGAGCCTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CCA 72 bp CCTCGAAGATTAGATGGAAGGCCCGGTGCCCTTCGCTaGGGTACCGCGGGAAGCACAGGCTCATGTTCGTTT +
Preference number: 6 (lower is better)
Translates to: PRRLDGRPGALR*GTAGSTGSCSF
Trigger: AAACGAACATGAGCCTGTGCTTCCCGCGGTACCCCAGCGAAGGGCACCGGGCCTTCCATCTAATCTTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000556141.1
ENST00000645989.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CAA 90 bp GATCTGTCCCACTGCCAAAGGCCTGGCCCCAGGTCTAGGTGCTGTTaGCTAAATCAGCCAGAGAGGAAGTACCACAGAGCAGAGGACAGG +
Preference number: 6 (lower is better)
Translates to: DLSHCQRPGPRSRCC*LNQPERKYHRAEDR
Trigger: CCTGTCCTCTGCTCTGTGGTACTTCCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS GCA 72 bp CTGTCCCACTGCCAAAGGCCTGGCCCCAGGTCTAGGTaGTGTTTGCTAAATCAGCCAGAGAGGAAGTACCAC +
Preference number: 6 (lower is better)
Translates to: LSHCQRPGPRSR*CLLNQPERKYH
Trigger: GTGGTACTTCCTCTCTGGCTGATTTAGCAAACAGCACCTAGACCTGGGGCCAGGCCTTTGGCAGTGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396782.2
ENST00000396789.4
ENST00000646659.1
ENST00000646739.1
CDS CCA 72 bp CCACCCTGCCAAGAGGGGAAACCAGCAATGCAGAAATaGTCCCCTTACCCGTTTCCTGGACAGAGGAATGTC +
Preference number: 6 (lower is better)
Translates to: PPCQEGKPAMQK*SPYPFPGQRNV
Trigger: GACATTCCTCTGTCCAGGAAACGGGTAAGGGGACCATTTCTGCATTGCTGGTTTCCCCTCTTGGCAGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS TCA 72 bp AGCCTACTATTCAGTTCCACTTTAGACACACAAAGTTaGGGCCGAGCTGGCAGGCTGAGCATGAGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLLFSSTLDTQS*GRAGRLSMRSR
Trigger: CCTGCTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAAAGTGGAACTGAATAGTAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS TCA 72 bp GCACCTACCTTGTGCTTGCCCATGTGGTTACCCTGCTaGGTCTGGATTTATGATCTGGGCAAGGAGATTGGC +
Preference number: 6 (lower is better)
Translates to: APTLCLPMWLPC*VWIYDLGKEIG
Trigger: GCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGGGTAACCACATGGGCAAGCACAAGGTAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS GCA 72 bp AGGTTCAGCACCATCAGGGCAGTGACAGAGCGCTTCTaGATCCTTTTCAGGATACTCCACACCACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: RFSTIRAVTERF*ILFRILHTTKL
Trigger: CAGCTTTGTGGTGTGGAGTATCCTGAAAAGGATGCAGAAGCGCTCTGTCACTGCCCTGATGGTGCTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000345363.8
ENST00000396782.2
ENST00000396789.4
ENST00000553481.1
ENST00000645335.1
ENST00000646659.1
ENST00000646739.1
ENST00000647085.2
CDS CAA 72 bp CAGCCTACTATTCAGTTCCACTTTAGACACACAAAGTaGAGGCCGAGCTGGCAGGCTGAGCATGAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: QPTIQFHFRHTK*RPSWQAEHEEQ
Trigger: CTGCTCCTCATGCTCAGCCTGCCAGCTCGGCCTCAACTTTGTGTGTCTAAAGTGGAACTGAATAGTAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CAA 72 bp CCTGCTGAGTCTGGATTTATGATCTGGGCAAGGAGATaGGCACTACCTCTTTCCTATCTTCTCACAGCCTAC +
Preference number: 6 (lower is better)
Translates to: PAESGFMIWARR*ALPLSYLLTAY
Trigger: GTAGGCTGTGAGAAGATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CCA 72 bp CCATGTGGTTACCCTGCTGAGTCTGGATTTATGATCTaGGCAAGGAGATTGGCACTACCTCTTTCCTATCTT +
Preference number: 6 (lower is better)
Translates to: PCGYPAESGFMI*ARRLALPLSYL
Trigger: AAGATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGGGTAACCACATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CAA 90 bp TGTGGTTACCCTGCTGAGTCTGGATTTATGATCTGGGCAAGGAGATaGGCACTACCTCTTTCCTATCTTCTCACAGCCTACTATTCAGTT +
Preference number: 6 (lower is better)
Translates to: CGYPAESGFMIWARR*ALPLSYLLTAYYSV
Trigger: AACTGAATAGTAGGCTGTGAGAAGATAGGAAAGAGGTAGTGCCAATCTCCTTGCCCAGATCATAAATCCAGACTCAGCAGGGTAACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CAA 72 bp CTGGTTCCATTTAGGTCAACCAATTCTCCATTCTCTTaGGTAGAAGCCAAAATCCAAATGGTCTCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: LVPFRSTNSPFS*VEAKIQMVSLV
Trigger: TACCAAGGAGACCATTTGGATTTTGGCTTCTACCAAAGAGAATGGAGAATTGGTTGACCTAAATGGAACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1
CDS CAA 90 bp TTAAAGGGACTGGTTCCATTTAGGTCAACCAATTCTCCATTCTCTTaGGTAGAAGCCAAAATCCAAATGGTCTCCTTGGTATCACACAGA +
Preference number: 6 (lower is better)
Translates to: LKGLVPFRSTNSPFS*VEAKIQMVSLVSHR
Trigger: TCTGTGTGATACCAAGGAGACCATTTGGATTTTGGCTTCTACCAAAGAGAATGGAGAATTGGTTGACCTAAATGGAACCAGTCCCTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396789.4
ENST00000646659.1