RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LTA4H (Homo sapiens)

Ensembl gene IDs: ENSG00000111144

Ensembl transcript IDs: ENST00000228740.7, ENST00000413268.6, ENST00000537111.6, ENST00000547393.5, ENST00000547982.1, ENST00000548375.5, ENST00000548852.5, ENST00000552789.5, ENST00000553041.5

Found 211 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTTGCCATCTTTAGCGCCAAAGGAATTGCGTCCTCCCACTTGGATTaGATGCAGAGCCGCAGCCATCTGAATCGTATTTCAGAATTGTTA +
Preference number: 1 (lower is better)
Translates to: VAIFSAKGIASSHLD*MQSRSHLNRISELL
Trigger: TAACAATTCTGAAATACGATTCAGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAAGATGGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CCA 90 bp TGGAACTTTTTGGATGAATTTGTATATTTTCCTGCTTGGGTCTTCTaGGTCAGGTGTTTCTCCATCACGAATAGCACTCATAAGTGCCAC +
Preference number: 1 (lower is better)
Translates to: WNFLDEFVYFPAWVF*VRCFSITNSTHKCH
Trigger: GTGGCACTTATGAGTGCTATTCGTGATGGAGAAACACCTGACCCAGAAGACCCAAGCAGGAAAATATACAAATTCATCCAAAAAGTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 90 bp CCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTaGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PHQHCSHGMHACFVL*VGSDSLIMGFVKGS
Trigger: GCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR-3UTR GCA 90 bp TGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGAGCGGCAAGGATTCTCCATaGCACCATAAGGGAAGGATG +
Preference number: 2 (lower is better)
Translates to: CTPLAFALCAPMEEVPKSGKDSP*HHKGRM
Trigger: CATCCTTCCCTTATGGTGGCATGGAGAATCCTTGCC...GCTCTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTaGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATT +
Preference number: 2 (lower is better)
Translates to: LLSLSPPALQSRDAC*LCALGRFGQLDHGI
Trigger: AATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR-3UTR CCA 90 bp TGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGAGCCATAATTGGGCTTTATaGGAGGCAGTCCAGGAGAGT +
Preference number: 2 (lower is better)
Translates to: CTPLAFALCAPMEEVPKSHNWAL*EAVQES
Trigger: ACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATG...GCTCTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR TCA 90 bp CTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTTGATTCAACCACAAGTTTGGTaGAAGGATGTGTCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: LYGRQSRRVEPGIPINLIQPQVW*KDVSPQ
Trigger: TTGGGGAGACACATCCTTTCACCAAACTTGTGGTTG...AATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR GCA 90 bp AAGGGAAGGATGGTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCATTTGTATATTTTCCTaGTTGGGTCTTCTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: KGRMVAGPIGHTVPIHTVICIFS*LGLLGQ
Trigger: CTGACCCAGAAGACCCAAGCAGGAAAATATACAAAT...GACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCACCATCCTTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR CCA 90 bp AAATGTCTGAACTTTTCACCAAACAATCGTCCGCAAATGTGGCGTTCCAAGTACCCTGCTTGGGTCTTCTaGGTCAGGTGTTTCTCCATC +
Preference number: 2 (lower is better)
Translates to: KCLNFSPNNRPQMWRSKYPAWVF*VRCFSI
Trigger: GATGGAGAAACACCTGACCCAGAAGACCCAAGCAGG...GTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTGAAAAGTTCAGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 90 bp CGCAGCCATCTGAATCGTATTTCAGAATTGTTAATGGCATTGAAGTaGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: RSHLNRISELLMALK*YTSCIRFMCPNGRG
Trigger: ACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAAATACGATTCAGATGGCTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR GCA 90 bp AGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGTCCTCCCAGATCTTCTaGTATTTTAAGCATAGATTC +
Preference number: 2 (lower is better)
Translates to: SCTPLAFALCAPMEEVPKSSQIF*YFKHRF
Trigger: GAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGA...CTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR GCA 90 bp AAATGTCTGAACTTTTCACCAAACAATCGTCCGCAAATGTGGCGTTCCAAGTACAATAGCACTCATAAGTaGCACCAGTTCTTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: KCLNFSPNNRPQMWRSKYNSTHK*HQFFRD
Trigger: GTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATT...GTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTGAAAAGTTCAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR GCA 72 bp TTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTaGTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATC +
Preference number: 3 (lower is better)
Translates to: FPHQHCSHGMHA*FVLLVGSDSLI
Trigger: GATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR GCA 72 bp AGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATaGTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTT +
Preference number: 3 (lower is better)
Translates to: SLSPPALQSRDA*LLCALGRFGQL
Trigger: AAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR-3UTR CAA 90 bp CTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAAGGCAGCAAGATCCTaGAATAAGGGCCGGGTAAAC +
Preference number: 3 (lower is better)
Translates to: LSPPALQSRDACLLCALGKAARS*NKGRVN
Trigger: GTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTT...ACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR TCA 72 bp TTTAGCGCCAAAGGAATTGCGTCCTCCCACTTGGATTaGATGCAGAGCCGCAGCCATCTGAATCGTATTTCA +
Preference number: 3 (lower is better)
Translates to: FSAKGIASSHLD*MQSRSHLNRIS
Trigger: TGAAATACGATTCAGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR CAA 90 bp TTGAAGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCAGATCAACCACAAGTTaGGTGAAAGGATGTGTCTCC +
Preference number: 3 (lower is better)
Translates to: LKLYTSCIRFMCPNGRGARSTTS*VKGCVS
Trigger: GGAGACACATCCTTTCACCAAACTTGTGGTTGATCT...GGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR CAA 90 bp AAATGTCTGAACTTTTCACCAAACAATCGTCCGCAAATGTGGCGTTCCAAGTACTGTATATTTTCCTGCTaGGGTCTTCTGGGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: KCLNFSPNNRPQMWRSKYCIFSC*GLLGQV
Trigger: CACCTGACCCAGAAGACCCAAGCAGGAAAATATACA...GTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTGAAAAGTTCAGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR GCA 72 bp TCAGAATTGTTAATGGCATTGAAGTTGTACACCTCTTaGATTCGCTTTATGTGCCCCAATGGAAGAGGTGCC +
Preference number: 3 (lower is better)
Translates to: SELLMALKLYTS*IRFMCPNGRGA
Trigger: GGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR-3UTR CAA 90 bp ACTTCTCAACATAAGCTTTTAAGAATCCTAGGAAAATCTCTGGTCCTCCAAGCAACATTGGAGAGTGACTaGTCGCCTGCCAGTAGAGTA +
Preference number: 3 (lower is better)
Translates to: TSQHKLLRILGKSLVLQATLESD*SPASRV
Trigger: TACTCTACTGGCAGGCGACAAGTCACTCTCCAATGT...TGCTTGGAGGACCAGAGATTTTCCTAGGATTCTTAAAAGCTTATGTTGAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CCA 72 bp TGTCTGAACTTTTCACCAAACAATCGTCCGCAAATGTaGCGTTCCAAGTACACAGTATGTCCCTCATTTAAC +
Preference number: 3 (lower is better)
Translates to: CLNFSPNNRPQM*RSKYTVCPSFN
Trigger: GTTAAATGAGGGACATACTGTGTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTGAAAAGTTCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp GTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCTCCCAGATCTTCAGCGCAGGTGCAGGTaGTTGGTCCGGCAGACGGAA +
Preference number: 4 (lower is better)
Translates to: VAGPIGHTVPIHTVLPDLQRRCR*LVRQTE
Trigger: TTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTG...AAGATCTGGGAGGACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGAGCGCAGGTGCAGGTGCTTaGTCCGGCAGACGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: CTPLAFALCAPMEEVPKSAGAGA*SGRRKP
Trigger: CGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGC...GCTCTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TCTGGGTCAGGTGTTTCTCCATCACGAATAGCACTCATAAGTGCCACCAGTTCTACGCTGCAGCGCAGGTaGAGGTGCTTGGTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SGSGVSPSRIALISATSSTLQRR*RCLVRQ
Trigger: CTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGT...AGAACTGGTGGCACTTATGAGTGCTATTCGTGATGGAGAAACACCTGACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAGGCCCACTTGGATTGAATaGAGAGCCGCAGCCATCCTC +
Preference number: 4 (lower is better)
Translates to: SPPALQSRDACLLCALGRPTWIE*RAAAIL
Trigger: GAGGATGGCTGCGGCTCTGCATTCAATCCAAGTGGG...CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAGGGCCGCAGCCATCCTCTaGAGCGTCTGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPPALQSRDACLLCALGRAAAIL*SVCAKN
Trigger: GTTTTTAGCACAGACGCTCCAGAGGATGGCTGCGGC...CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp ATCACGAATAGCACTCATAAGTGCCACCAGTTCTTTAGGGACAGACACCTCTGCCCTGAGACTGGACCGTaGGAGCAGCAGTCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ITNSTHKCHQFFRDRHLCPETGP*EQQSRS
Trigger: TGACCGGGACTGCTGCTCTCACGGTCCAGTCTCAGG...GCAGAGGTGTCTGTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATTCGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp TGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGAGCCGCAGATTGTCCTCCTaGGACTGGACCGTGAGAGCA +
Preference number: 4 (lower is better)
Translates to: CTPLAFALCAPMEEVPKSRRLSS*DWTVRA
Trigger: TGCTCTCACGGTCCAGTCTCAGGAGGACAATCTGCG...GCTCTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAGGGCAGACTTTTCCACCTaGTCTTTCTCAGACCACACC +
Preference number: 4 (lower is better)
Translates to: SPPALQSRDACLLCALGRADFST*SFSDHT
Trigger: GGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGC...CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR CAA 72 bp CTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTaGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LSPPALQSRDAC*LCALGRFGQLD
Trigger: ATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp AAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTTTCCCCACCAGCATTaGAGTCACGGGATGCATGCT +
Preference number: 4 (lower is better)
Translates to: KSFPTSIAVTGCMLALCSFPHQH*SHGMHA
Trigger: AGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAA...AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp GTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCTCCCAGATCTTTTGCGTCCTCCCACTTaGATTGAATGCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VAGPIGHTVPIHTVLPDLLRPPT*IECRAA
Trigger: TGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAA...AAGATCTGGGAGGACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp GTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCTCCCAGATCTTTGGATGGCCTGGCACTaGCTAAAGAGATATGGGTGT +
Preference number: 4 (lower is better)
Translates to: VAGPIGHTVPIHTVLPDLWMAWH*LKRYGC
Trigger: ACACCCATATCTCTTTAGTCAGTGCCAGGCCATCCA...AAGATCTGGGAGGACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCTCCTCCCACTTGGATTaGATGCAGAGCCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HACFVLLVGSDSLIMGFVSSHLD*MQSRSH
Trigger: ATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGA...GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp CTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTTGATTTCCTCCCACTTGGATTaGATGCAGAGCCGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LYGRQSRRVEPGIPINLISSHLD*MQSRSH
Trigger: ATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGA...AATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGTCTCGGGCATGGCTCTaGGGGATCACACAGCACAGC +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLSRAWL*GITQHS
Trigger: GCTGTGCTGTGTGATCCCCCAGAGCCATGCCCGAGA...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAGGAATAGCACTCATAAGTaGCACCAGTTCTTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: SPPALQSRDACLLCALGRNSTHK*HQFFRD
Trigger: GTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATT...CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp AAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTATTGCAGTCACGGGATaGATGCTTGCTTTGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSFPTSIAVTGCMLALCSIAVTG*MLALCS
Trigger: AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAAT...AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp GCATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTAAACTCCCAAGCCCATaGATCCTCTTGCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ACLLCALGRFGQLDHGICKLPSP*ILLPSS
Trigger: GGAAGAGGGCAAGAGGATGCATGGGCTTGGGAGTTT...ACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp AAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTCATAATTGGGCTTTATaGGAGGCAGTCCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: KSFPTSIAVTGCMLALCSHNWAL*EAVQES
Trigger: ACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATG...AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTTTGCGTCCTCCCACTTaGATTGAATGCAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: LLSLSPPALQSRDACLLCLRPPT*IECRAA
Trigger: TGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAA...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR CAA 72 bp CATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTaGGTAGGTTCGGACAGCTTGATCATGGGATTTGTC +
Preference number: 4 (lower is better)
Translates to: HCSHGMHACFVL*VGSDSLIMGFV
Trigger: GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCTGGATGGCCTGGCACTaGCTAAAGAGATATGGGTGT +
Preference number: 4 (lower is better)
Translates to: HACFVLLVGSDSLIMGFVWMAWH*LKRYGC
Trigger: ACACCCATATCTCTTTAGTCAGTGCCAGGCCATCCA...GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp TTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCCTTCTGACAAGGAAGGATTaGTCTGCAGTGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: LVGSDSLIMGFVKGSKILLTRKD*SAVDGL
Trigger: CAGGCCATCCACTGCAGAGCAATCCTTCCTTGTCAG...AAGGATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp TTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCCACGGGATGCATGCTTaGTTTGTGCTCTTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: FVLLVGSDSLIMGFVKGSHGMHA*FVLLVG
Trigger: ACCTACCAAGAGCACAAAGCAAGCATGCATCCCGTG...GCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp CTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCCAGTCACGGGATGCATaGTTGCTTTGTGCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLVGSDSLIMGFVKGSKIQSRDA*LLCALG
Trigger: ACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTG...GATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp AAATGTGGCGTTCCAAGTACACAGTATGTCCCTCATTTAACCAAAAGTGATCCCCCACTATCTCGGGCATaGCTCTGGGGGATCACACAG +
Preference number: 4 (lower is better)
Translates to: KCGVPSTQYVPHLTKSDPPLSRA*LWGITQ
Trigger: CTGTGTGATCCCCCAGAGCCATGCCCGAGATAGTGG...GGGATCACTTTTGGTTAAATGAGGGACATACTGTGTACTTGGAACGCCACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp AAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTGTATATTTTCCTGCTTaGGTCTTCTGGGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KSFPTSIAVTGCMLALCSVYFPA*VFWVRC
Trigger: ACACCTGACCCAGAAGACCCAAGCAGGAAAATATAC...AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCCACACCAAAGTTCTTaGGCCAATTTGCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: LSLSPPALQSRDACLLCAPHQSS*ANLPAF
Trigger: GAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGG...AGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp AGTCATATCATAATTGGGCTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCCCACACCAAAGTTCTTaGGCCAATTTGCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SHIIIGLYGRQSRRVEPGPHQSS*ANLPAF
Trigger: GAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGG...GCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATGATATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTAAGGAAGGATTGCTCTaGAGTGGATGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPKEGLL*SGWPGT
Trigger: AGTGCCAGGCCATCCACTGCAGAGCAATCCTTCCTT...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGCTGACAAGGAAGGATTaGTCTGCAGTGGATGGCCTG +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLLTRKD*SAVDGL
Trigger: CAGGCCATCCACTGCAGAGCAATCCTTCCTTGTCAG...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp GCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAAGGATTCTCCATaGCACCATAAGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: ACFVLLVGSDSLIMGFVKGKDSP*HHKGRM
Trigger: CATCCTTCCCTTATGGTGGCATGGAGAATCCTTGCC...TTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp ATTTCATGTGCAATGACATTGGAGAGTGACTTGTCGCCTGCCAGTAGAGTAGGAGGCAAGGATTCTCCATaGCACCATAAGGGAAGGATG +
Preference number: 4 (lower is better)
Translates to: ISCAMTLESDLSPASRVGGKDSP*HHKGRM
Trigger: CATCCTTCCCTTATGGTGGCATGGAGAATCCTTGCC...TCCTACTCTACTGGCAGGCGACAAGTCACTCTCCAATGTCATTGCACATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp ATTTCATGTGCAATGACATTGGAGAGTGACTTGTCGCCTGCCAGTAGAGTAGGATGCATTCGCTTTATGTaGCCCAATGGAAGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ISCAMTLESDLSPASRVGCIRFM*PNGRGA
Trigger: GGCACCTCTTCCATTGGGGCACATAAAGCGAATGCA...TCCTACTCTACTGGCAGGCGACAAGTCACTCTCCAATGTCATTGCACATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTGCCCATGCATCCTCTTaGCCTCTTCCCTTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPAHASS*PLPLLL
Trigger: AAGCAACAAGGGAAGAGGGCAAGAGGATGCATGGGC...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTCCTGCTTGGGTCTTCTaGGTCAGGTGTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPPAWVF*VRCFSI
Trigger: GATGGAGAAACACCTGACCCAGAAGACCCAAGCAGG...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGCCTGCTTGGGTCTTCTaGGTCAGGTGTTTCTCCATC +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLPAWVF*VRCFSI
Trigger: GATGGAGAAACACCTGACCCAGAAGACCCAAGCAGG...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp CACCAAACAATCGTCCGCAAATGTGGCGTTCCAAGTACACAGTATGTCCCTCATGAAGAAAGGAGCCTCTaGAGCGTCTGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: HQTIVRKCGVPSTQYVPHEERSL*SVCAKN
Trigger: GTTTTTAGCACAGACGCTCCAGAGGCTCCTTTCTTC...ATGAGGGACATACTGTGTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TGCTCTTTCTCAGACCACACCAAAGTTCTTGGGCCAATTTGCCTGCTTTCTAAATATCCAAAACCAGGCTaGGCAGATTGTCCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CSFSDHTKVLGPICLLSKYPKPG*ADCPPE
Trigger: CTCAGGAGGACAATCTGCGCAGCCTGGTTTTGGATA...TTTAGAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp AAATGTGGCGTTCCAAGTACACAGTATGTCCCTCATTTAACCAAAAGTGATCCCAAGGAAGGATTGCTCTaGAGTGGATGGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: KCGVPSTQYVPHLTKSDPKEGLL*SGWPGT
Trigger: AGTGCCAGGCCATCCACTGCAGAGCAATCCTTCCTT...GGGATCACTTTTGGTTAAATGAGGGACATACTGTGTACTTGGAACGCCACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TGCTCTTTCTCAGACCACACCAAAGTTCTTGGGCCAATTTGCCTGCTTTCTAAAGCAGACTTTTCCACCTaGTCTTTCTCAGACCACACC +
Preference number: 4 (lower is better)
Translates to: CSFSDHTKVLGPICLLSKADFST*SFSDHT
Trigger: GGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGC...TTTAGAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGAGCCTGACTAAAGAGATATaGGTGTTCCTTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: CTPLAFALCAPMEEVPKSLTKEI*VFLPRS
Trigger: ACTTCTGGGAAGGAACACCCATATCTCTTTAGTCAG...GCTCTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGATCCCAAGTTTTGTTaGTCACTAGATTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLSLSPPALQSRDACLLCDPKFC*SLDSLS
Trigger: GGACAGGGAATCTAGTGACCAACAAAACTTGGGATC...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TTGAAGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCGATCCCAAGTTTTGTTaGTCACTAGATTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LKLYTSCIRFMCPNGRGADPKFC*SLDSLS
Trigger: GGACAGGGAATCTAGTGACCAACAAAACTTGGGATC...GGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAATCGACGAGTCTTAACTaGGATATGCATGGTCGGTAC +
Preference number: 4 (lower is better)
Translates to: CLLCALGRFGQLDHGICQSTSLN*DMHGRY
Trigger: GTACCGACCATGCATATCCCAGTTAAGACTCGTCGA...TTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
3UTR CAA 72 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTaGATCATGGGATTTGTCAAAGGCAGCAAGATCCTT +
Preference number: 4 (lower is better)
Translates to: HACFVLLVGSDS*IMGFVKGSKIL
Trigger: AAGGATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTCAACCACAAGTTTGGTaGAAGGATGTGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPQPQVW*KDVSPQ
Trigger: TTGGGGAGACACATCCTTTCACCAAACTTGTGGTTG...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGCAACCACAAGTTTGGTaGAAGGATGTGTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLQPQVW*KDVSPQ
Trigger: TTGGGGAGACACATCCTTTCACCAAACTTGTGGTTG...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp GCATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCTTCTCATAGGGAACTaGAGAATAAGCTACATCAGG +
Preference number: 4 (lower is better)
Translates to: ACLLCALGRFGQLDHGICLLIGN*RISYIR
Trigger: CCTGATGTAGCTTATTCTTCAGTTCCCTATGAGAAG...ACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp AGTCATATCATAATTGGGCTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTTGTATATTTTCCTaGTTGGGTCTTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SHIIIGLYGRQSRRVEPGICIFS*LGLLGQ
Trigger: CTGACCCAGAAGACCCAAGCAGGAAAATATACAAAT...GCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATGATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTTTTAAAAGACAAACATaGGCCTGTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LLSLSPPALQSRDACLLCFKRQT*ACSPSY
Trigger: GTAGCTGGGACTACAGGCGCATGTTTGTCTTTTAAA...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGTCTTAACTGGGATATaGATGGTCGGTACTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LLSLSPPALQSRDACLLCVLTGI*MVGTCL
Trigger: AAGACAAGTACCGACCATGCATATCCCAGTTAAGAC...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp AAGGGAAGGATGGTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCAGGTAGCAGGGTATTaGAACTTTTTGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: KGRMVAGPIGHTVPIHTVQVAGY*NFLDEF
Trigger: AAATTCATCCAAAAAGTTCCAATACCCTGCTACCTG...GACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCACCATCCTTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCGAGTCATATCATAATTaGGCTTTATGGGAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: HACFVLLVGSDSLIMGFVESYHN*ALWEAV
Trigger: GACTGCCTCCCATAAAGCCCAATTATGATATGACTC...GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TGCTCTTTCTCAGACCACACCAAAGTTCTTGGGCCAATTTGCCTGCTTTCTAAACTTTATGTGCCCCAATaGAAGAGGTGCCTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CSFSDHTKVLGPICLLSKLYVPQ*KRCLRA
Trigger: TGCTCTTAGGCACCTCTTCCATTGGGGCACATAAAG...TTTAGAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 72 bp TTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTaGGGCCAATTTGCCTGCTTTCTAAAGCTCCAACAA +
Preference number: 4 (lower is better)
Translates to: FPPALSQTTPKF*GQFACFLKLQQ
Trigger: TTGTTGGAGCTTTAGAAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp TTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTGCATTCCAATCAACTTaGTTGAGAACATCAACCTTA +
Preference number: 4 (lower is better)
Translates to: LSLSPPALQSRDACLLCAAFQST*LRTSTL
Trigger: TAAGGTTGATGTTCTCAATCAAGTTGATTGGAATGC...AGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TCTGGGTCAGGTGTTTCTCCATCACGAATAGCACTCATAAGTGCCACCAGTTCTAAGAGAGATTTCCATTaGCGATCCCTTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: SGSGVSPSRIALISATSSKRDFH*RSLVTL
Trigger: CAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTT...AGAACTGGTGGCACTTATGAGTGCTATTCGTGATGGAGAAACACCTGACCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCCTTCTGACTAAAGAGATATaGGTGTTCCTTCCCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LVGSDSLIMGFVKGSKILLTKEI*VFLPRS
Trigger: ACTTCTGGGAAGGAACACCCATATCTCTTTAGTCAG...AAGGATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGGTATATTTTCCTGCTTaGGTCTTCTGGGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLVYFPA*VFWVRC
Trigger: ACACCTGACCCAGAAGACCCAAGCAGGAAAATATAC...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTAATCGTCCGCAAATGTaGCGTTCCAAGTACACAGTA +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPNRPQM*RSKYTV
Trigger: TACTGTGTACTTGGAACGCCACATTTGCGGACGATT...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp CTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTTGATTGCATTCCAATCAACTTaGTTGAGAACATCAACCTTA +
Preference number: 4 (lower is better)
Translates to: LYGRQSRRVEPGIPINLIAFQST*LRTSTL
Trigger: TAAGGTTGATGTTCTCAATCAAGTTGATTGGAATGC...AATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp TGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAGCAGTAATCCATCTTTaGCTTAAGGCAATACAAGCA +
Preference number: 4 (lower is better)
Translates to: CLLCALGRFGQLDHGICQAVIHL*LKAIQA
Trigger: TGCTTGTATTGCCTTAAGTCAAAGATGGATTACTGC...TTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp AAATGTCTGAACTTTTCACCAAACAATCGTCCGCAAATGTGGCGTTCCAAGTACAAGTTGTACACCTCTTaGATTCGCTTTATGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KCLNFSPNNRPQMWRSKYKLYTS*IRFMCP
Trigger: GGGGCACATAAAGCGAATGCAAGAGGTGTACAACTT...GTACTTGGAACGCCACATTTGCGGACGATTGTTTGGTGAAAAGTTCAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp TGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAAGAGAGATTTCCATTaGCGATCCCTTGTAACTTTG +
Preference number: 4 (lower is better)
Translates to: CLLCALGRFGQLDHGICQKRDFH*RSLVTL
Trigger: CAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTT...TTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp GCATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTGAGAGCAGAAGATTTTaGAGAGGTCTCAAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ACLLCALGRFGQLDHGICESRRF*RGLKRN
Trigger: ATTTCTTTTGAGACCTCTCCAAAATCTTCTGCTCTC...ACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCCAGGTAGCAGGGTATTaGAACTTTTTGGATGAATTT +
Preference number: 4 (lower is better)
Translates to: HACFVLLVGSDSLIMGFVQVAGY*NFLDEF
Trigger: AAATTCATCCAAAAAGTTCCAATACCCTGCTACCTG...GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CCA 90 bp TACGGTCCTCCCAGATCTTCTGCTATTTTAAGCATAGATTCAGTCTCAGAAAACCATAATTGGGCTTTATaGGAGGCAGTCCAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: YGPPRSSAILSIDSVSENHNWAL*EAVQES
Trigger: ACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATG...GTTTTCTGAGACTGAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGACCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGGAGTCATATCATAATTaGGCTTTATGGGAGGCAGTC +
Preference number: 4 (lower is better)
Translates to: THKQTFPPALSQTTPKFLESYHN*ALWEAV
Trigger: GACTGCCTCCCATAAAGCCCAATTATGATATGACTC...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 72 bp ACATCAGGGTCTATATCTGTCAGATCAACCACAAGTTaGGTGAAAGGATGTGTCTCCCCAAATGTCTTTACC +
Preference number: 4 (lower is better)
Translates to: TSGSISVRSTTS*VKGCVSPNVFT
Trigger: GGTAAAGACATTTGGGGAGACACATCCTTTCACCAAACTTGTGGTTGATCTGACAGATATAGACCCTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 72 bp TTCAGAATTGTTAATGGCATTGAAGTTGTACACCTCTaGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: FRIVNGIEVVHL*HSLYVPQWKRC
Trigger: GCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp GCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAATATTTCATGTGCAATaGCATTGGAGAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: ACFVLLVGSDSLIMGFVKIFHVQ*HWRVTC
Trigger: ACAAGTCACTCTCCAATGTCATTGCACATGAAATAT...TTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp AAATGTGGCGTTCCAAGTACACAGTATGTCCCTCATTTAACCAAAAGTGATCCCAATAGCACTCATAAGTaGCACCAGTTCTTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: KCGVPSTQYVPHLTKSDPNSTHK*HQFFRD
Trigger: GTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATT...GGGATCACTTTTGGTTAAATGAGGGACATACTGTGTACTTGGAACGCCACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp TTGTCAAAGGCAGCAAGATCCTTGAATAAGGGCCGGGTAAACTTCATTCTTCCTATTTGTATATTTTCCTaGTTGGGTCTTCTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSKAARSLNKGRVNFILPICIFS*LGLLGQ
Trigger: CTGACCCAGAAGACCCAAGCAGGAAAATATACAAAT...AGGAAGAATGAAGTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTTTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR GCA 90 bp TTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCCTTTCCTCCCAGATCTTCTaGTATTTTAAGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: LVGSDSLIMGFVKGSKILSSQIF*YFKHRF
Trigger: GAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGA...AAGGATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR TCA 90 bp TACGGTCCTCCCAGATCTTCTGCTATTTTAAGCATAGATTCAGTCTCAGAAAACCTTCTCATAGGGAACTaGAGAATAAGCTACATCAGG +
Preference number: 4 (lower is better)
Translates to: YGPPRSSAILSIDSVSENLLIGN*RISYIR
Trigger: CCTGATGTAGCTTATTCTTCAGTTCCCTATGAGAAG...GTTTTCTGAGACTGAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGACCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CCA 90 bp ACTTCTCAACATAAGCTTTTAAGAATCCTAGGAAAATCTCTGGTCCTCCAAGCAAATCGTCCGCAAATGTaGCGTTCCAAGTACACAGTA +
Preference number: 4 (lower is better)
Translates to: TSQHKLLRILGKSLVLQANRPQM*RSKYTV
Trigger: TACTGTGTACTTGGAACGCCACATTTGCGGACGATT...TGCTTGGAGGACCAGAGATTTTCCTAGGATTCTTAAAAGCTTATGTTGAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR TCA 90 bp TACGGTCCTCCCAGATCTTCTGCTATTTTAAGCATAGATTCAGTCTCAGAAAACGCAGTAATCCATCTTTaGCTTAAGGCAATACAAGCA +
Preference number: 4 (lower is better)
Translates to: YGPPRSSAILSIDSVSENAVIHL*LKAIQA
Trigger: TGCTTGTATTGCCTTAAGTCAAAGATGGATTACTGC...GTTTTCTGAGACTGAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGACCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR GCA 90 bp AAATGTGGCGTTCCAAGTACACAGTATGTCCCTCATTTAACCAAAAGTGATCCCTCCTCCCAGATCTTCTaGTATTTTAAGCATAGATTC +
Preference number: 4 (lower is better)
Translates to: KCGVPSTQYVPHLTKSDPSSQIF*YFKHRF
Trigger: GAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGA...GGGATCACTTTTGGTTAAATGAGGGACATACTGTGTACTTGGAACGCCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
3UTR CAA 72 bp CAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTaGATTGAGAACATCAACCTTATCTTTAAAATAGGA +
Preference number: 4 (lower is better)
Translates to: QSRRVEPGIPIN*IENINLIFKIG
Trigger: TCCTATTTTAAAGATAAGGTTGATGTTCTCAATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS GCA 90 bp GTCCCGGTCAGCGTCCGGCGAGTAAAGTCGACGCTGCAGCGCAGGTaGAGGTGCTTGGTCCGGCAGACGGAAGCCGGAGAGGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: VPVSVRRVKSTLQRR*RCLVRQTEAGEANE
Trigger: TTCGTTGGCCTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCGCCGGACGCTGACCGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS GCA 90 bp GTCAGCGTCCGGCGAGTAAAGTCGACGCTGCAGCGCAGGTGCAGGTaGTTGGTCCGGCAGACGGAAGCCGGAGAGGCCAACGAACAGGTA +
Preference number: 5 (lower is better)
Translates to: VSVRRVKSTLQRRCR*LVRQTEAGEANEQV
Trigger: TACCTGTTCGTTGGCCTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCGCCGGACGCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS CCA 90 bp CGGAAGCCGGAGAGGCCAACGAACAGGTATCCACTATCTCGGGCATaGCTCTGGGGGATCACACAGCACAGCGACCTACAGCCCAACGCT +
Preference number: 5 (lower is better)
Translates to: RKPERPTNRYPLSRA*LWGITQHSDLQPNA
Trigger: AGCGTTGGGCTGTAGGTCGCTGTGCTGTGTGATCCCCCAGAGCCATGCCCGAGATAGTGGATACCTGTTCGTTGGCCTCTCCGGCTTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228740.7
ENST00000548852.5
CDS CCA 90 bp CCGGAGAGGCCAACGAACAGGTATCCACTATCTCGGGCATGGCTCTaGGGGATCACACAGCACAGCGACCTACAGCCCAACGCTCAGCTA +
Preference number: 5 (lower is better)
Translates to: PERPTNRYPLSRAWL*GITQHSDLQPNAQL
Trigger: TAGCTGAGCGTTGGGCTGTAGGTCGCTGTGCTGTGTGATCCCCCAGAGCCATGCCCGAGATAGTGGATACCTGTTCGTTGGCCTCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228740.7
ENST00000548852.5
CDS TCA 90 bp GTAAGGTCCTTTGTATCCAAAACCAGGCTGCGCAGATTGTCCTCCTaGGACTGGACCGTGAGAGCAGCAGTCCCGGTCAGCGTCCGGCGA +
Preference number: 5 (lower is better)
Translates to: VRSFVSKTRLRRLSS*DWTVRAAVPVSVRR
Trigger: TCGCCGGACGCTGACCGGGACTGCTGCTCTCACGGTCCAGTCTCAGGAGGACAATCTGCGCAGCCTGGTTTTGGATACAAAGGACCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS-3UTR CAA 90 bp AAGGGAAGGATGGTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCGCAGGTGCAGGTGCTaGGTCCGGCAGACGGAAGCC +
Preference number: 5 (lower is better)
Translates to: KGRMVAGPIGHTVPIHTVRRCRC*VRQTEA
Trigger: GGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCG...GACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCACCATCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp CTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTGTCCTCCCACTTGGATaGAATGCAGAGCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: LSPPALQSRDACLLCALGVLPLG*NAEPQP
Trigger: TGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGAC...ACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS CCA 90 bp GTTCAGTTGCCATCTTTAGCGCCAAAGGAATTGCGTCCTCCCACTTaGATTGAATGCAGAGCCGCAGCCATCCTCTGGAGCGTCTGTGCT +
Preference number: 5 (lower is better)
Translates to: VQLPSLAPKELRPPT*IECRAAAILWSVCA
Trigger: AGCACAGACGCTCCAGAGGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAAGATGGCAACTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp TCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTTGGTAGGGCTTGCTTTGTGCTCTaGGTAGGTTCGGACAGCTTG +
Preference number: 5 (lower is better)
Translates to: SPPALQSRDACLLCALGRACFVL*VGSDSL
Trigger: CAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGC...CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp AGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGGTCCTCCCACTTGGATaGAATGCAGAGCCGCAGCCA +
Preference number: 5 (lower is better)
Translates to: SCTPLAFALCAPMEEVPKVLPLG*NAEPQP
Trigger: TGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGAC...CTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTCTTTCCCCACCAGCATaGCAGTCACGGGATGCATGC +
Preference number: 5 (lower is better)
Translates to: LLSLSPPALQSRDACLLCLSPPA*QSRDAC
Trigger: GCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAG...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS TCA 90 bp CAGTGTCCTCACACAACTCGTGAAAGACCAGGGTTCAGGTCCGATTaGAGGAGGGGGTTCAGTATAAAAAGCAGTATATTGAGGCCGGGC +
Preference number: 5 (lower is better)
Translates to: QCPHTTRERPGFRSD*RRGFSIKSSILRPG
Trigger: GCCCGGCCTCAATATACTGCTTTTTATACTGAACCCCCTCCTTCAATCGGACCTGAACCCTGGTCTTTCACGAGTTGTGTGAGGACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS TCA 90 bp AGGTCAACACAGCTCCCACCTCGAAGCAGCTGCCAGTTTATTACATaGAGTGTCAGGCTGTGGACTGCAGGCATGCCATTTTGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: RSTQLPPRSSCQFIT*SVRLWTAGMPFCLQ
Trigger: TTGAAGACAAAATGGCATGCCTGCAGTCCACAGCCTGACACTTCATGTAATAAACTGGCAGCTGCTTCGAGGTGGGAGCTGTGTTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS-3UTR CAA 90 bp GTGGCAGGACCAATAGGTCATACTGTCCCCATACATACGGTCCTCCCAGATCTTACCACACCAAAGTTCTaGGGCCAATTTGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VAGPIGHTVPIHTVLPDLTTPKF*GQFACF
Trigger: AAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGT...AAGATCTGGGAGGACCGTATGTATGGGGACAGTATGACCTATTGGTCCTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp GCATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTTCACGGGATGCATGCTaGCTTTGTGCTCTTGGTAGG +
Preference number: 5 (lower is better)
Translates to: ACLLCALGRFGQLDHGICSRDAC*LCALGR
Trigger: CCTACCAAGAGCACAAAGCAAGCATGCATCCCGTGA...ACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS GCA 90 bp GCTGCCAGTTTATTACATGAAGTGTCAGGCTGTGGACTGCAGGCATaGCATTTTGTCTTCAAGAACAGGTGGGATCAGAGGTCCTTGACT +
Preference number: 5 (lower is better)
Translates to: AASLLHEVSGCGLQA*HFVFKNRWDQRSLT
Trigger: AGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATGGCATGCCTGCAGTCCACAGCCTGACACTTCATGTAATAAACTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 90 bp TCAGGCTGTGGACTGCAGGCATGCCATTTTGTCTTCAAGAACAGGTaGGATCAGAGGTCCTTGACTGATCAGAATACACTGCTTTCAACC +
Preference number: 5 (lower is better)
Translates to: SGCGLQACHFVFKNR*DQRSLTDQNTLLST
Trigger: GGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATGGCATGCCTGCAGTCCACAGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS-3UTR CAA 90 bp AGTCATATCATAATTGGGCTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCTGTATATTTTCCTGCTaGGGTCTTCTGGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: SHIIIGLYGRQSRRVEPGCIFSC*GLLGQV
Trigger: CACCTGACCCAGAAGACCCAAGCAGGAAAATATACA...GCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAATTATGATATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp AAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTCTAGATCAACCACAAGTTaGGTGAAAGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: KSFPTSIAVTGCMLALCSRSTTS*VKGCVS
Trigger: GGAGACACATCCTTTCACCAAACTTGTGGTTGATCT...AGAGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp GCATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTTTAGCGCCAAAGGAATaGCGTCCTCCCACTTGGATT +
Preference number: 5 (lower is better)
Translates to: ACLLCALGRFGQLDHGICLAPKE*RPPTWI
Trigger: AATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAA...ACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp CTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTTGATTTTAGCGCCAAAGGAATaGCGTCCTCCCACTTGGATT +
Preference number: 5 (lower is better)
Translates to: LYGRQSRRVEPGIPINLILAPKE*RPPTWI
Trigger: AATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAA...AATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTAAGGCAGCAAGATCCTaGAATAAGGGCCGGGTAAAC +
Preference number: 5 (lower is better)
Translates to: LLSLSPPALQSRDACLLCKAARS*NKGRVN
Trigger: GTTTACCCGGCCCTTATTCAAGGATCTTGCTGCCTT...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS GCA 90 bp TTGGTGATCCAAAAGAAAGGCAACAAGAGAACATGCCATGGAACATaGCATGGTCAGTGTCCTCACACAACTCGTGAAAGACCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LVIQKKGNKRTCHGT*HGQCPHTTRERPGF
Trigger: GAACCCTGGTCTTTCACGAGTTGTGTGAGGACACTGACCATGGCATGTTCCATGGCATGTTCTCTTGTTGCCTTTCTTTTGGATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS-3UTR CAA 90 bp CTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCTGTATATTTTCCTGCTaGGGTCTTCTGGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: LLVGSDSLIMGFVKGSKICIFSC*GLLGQV
Trigger: CACCTGACCCAGAAGACCCAAGCAGGAAAATATACA...GATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp GCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAACATTGGAGAGTGACTaGTCGCCTGCCAGTAGAGTA +
Preference number: 5 (lower is better)
Translates to: ACFVLLVGSDSLIMGFVKTLESD*SPASRV
Trigger: TACTCTACTGGCAGGCGACAAGTCACTCTCCAATGT...TTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp CTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCAAGATCTCATGTGCAATGACATaGGAGAGTGACTTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: LLVGSDSLIMGFVKGSKISCAMT*ESDLSP
Trigger: AGGCGACAAGTCACTCTCCAATGTCATTGCACATGA...GATCTTGCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp CTTTATGGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTTGATTTCATGTGCAATGACATaGGAGAGTGACTTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: LYGRQSRRVEPGIPINLISCAMT*ESDLSP
Trigger: AGGCGACAAGTCACTCTCCAATGTCATTGCACATGA...AATCAAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp TCTGGGTCAGGTGTTTCTCCATCACGAATAGCACTCATAAGTGCCACCAGTTCTGAAGTTGTACACCTCTaGCATTCGCTTTATGTGCCC +
Preference number: 5 (lower is better)
Translates to: SGSGVSPSRIALISATSSEVVHL*HSLYVP
Trigger: GGGCACATAAAGCGAATGCAAGAGGTGTACAACTTC...AGAACTGGTGGCACTTATGAGTGCTATTCGTGATGGAGAAACACCTGACCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS CCA 90 bp AATGAGAAGGAAAGCATTAGCAGGCAAGTACTTACTTGGGCTTTATaGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCCAATCAACTT +
Preference number: 5 (lower is better)
Translates to: NEKESISRQVLTWAL*EAVQESRARHSNQL
Trigger: AAGTTGATTGGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAAGTAAGTACTTGCCTGCTAATGCTTTCCTTCTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS-3UTR CAA 90 bp GCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAACCACACCAAAGTTCTaGGGCCAATTTGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: ACFVLLVGSDSLIMGFVKTTPKF*GQFACF
Trigger: AAAGCAGGCAAATTGGCCCAAGAACTTTGGTGTGGT...TTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp TTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCTTCTTCCTTGTTCAGTaGCCATCTTTAGCGCCAAAG +
Preference number: 5 (lower is better)
Translates to: FVLLVGSDSLIMGFVKGSFFLVQ*PSLAPK
Trigger: CTTTGGCGCTAAAGATGGCAACTGAACAAGGAAGAA...GCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGTAGGTTCGGACAGCTaGATCATGGGATTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: LLSLSPPALQSRDACLLCVGSDS*IMGFVK
Trigger: TTTGACAAATCCCATGATCAAGCTGTCCGAACCTAC...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS TCA 90 bp CTTGCAAAACATCCCTCTTTCTCCGTAAATCATGCTTGCTTGTACTaGAATGCTTGTATTAGGGAACAGAGAGGCACCTGCCCCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LAKHPSFSVNHACLY*NACIREQRGTCPLE
Trigger: CTCTAAGGGGCAGGTGCCTCTCTGTTCCCTAATACAAGCATTTCAGTACAAGCAAGCATGATTTACGGAGAAAGAGGGATGTTTTGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS GCA 90 bp AGAGGAGGTGTAGACAGGAGGAGAGAAAATAAACTCCCAAGCCCATaGATCCTCTTGCCCTCTTCCCTTGTTGCTTTAAAAGACAAACAT +
Preference number: 5 (lower is better)
Translates to: RGGVDRRRENKLPSP*ILLPSSLVALKDKH
Trigger: ATGTTTGTCTTTTAAAGCAACAAGGGAAGAGGGCAAGAGGATGCATGGGCTTGGGAGTTTATTTTCTCTCCTCCTGTCTACACCTCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000413268.6
ENST00000552789.5
CDS CCA 90 bp ATGGGCAAAGCCTTCTCCACTCCTAAACTTCCTGGAACTGTCTTTTaGCTATATCAGGCCCCTGAAGTTAGAGTCTTTGAAAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: MGKAFSTPKLPGTVF*LYQAPEVRVFERLQ
Trigger: TTGGAGTCTTTCAAAGACTCTAACTTCAGGGGCCTGATATAGCCAAAAGACAGTTCCAGGAAGTTTAGGAGTGGAGAAGGCTTTGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS-3UTR CAA 90 bp TTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCGAAGAGAGATTTCCATaGGCGATCCCTTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: FVLLVGSDSLIMGFVKGSEERFP*AIPCNF
Trigger: AAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTC...GCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp AGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGGAAGAGAGATTTCCATaGGCGATCCCTTGTAACTTT +
Preference number: 5 (lower is better)
Translates to: SCTPLAFALCAPMEEVPKEERFP*AIPCNF
Trigger: AAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTC...CTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp TTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCAAAGGCAGCGGAGAGCAGAAGATTTaGGAGAGGTCTCAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: FVLLVGSDSLIMGFVKGSGEQKI*ERSQKK
Trigger: TTTCTTTTGAGACCTCTCCAAAATCTTCTGCTCTCC...GCTGCCTTTGACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp TTCTCCATCACGAATAGCACTCATAAGTGCCACCAGTTCTTTAGGGACAGACACAGATCAACCACAAGTTaGGTGAAAGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FSITNSTHKCHQFFRDRHRSTTS*VKGCVS
Trigger: GGAGACACATCCTTTCACCAAACTTGTGGTTGATCT...GTGTCTGTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATTCGTGATGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp TTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTGCTGGCATTCCAATCAACTaGATTGAGAACATCAACCTT +
Preference number: 5 (lower is better)
Translates to: LSLSPPALQSRDACLLCAGIPIN*IENINL
Trigger: AAGGTTGATGTTCTCAATCAAGTTGATTGGAATGCC...AGCACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp AGTTGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGTGCCTAAGTTAATGGCATTGAAGTaGTACACCTCTTGCATTCGC +
Preference number: 5 (lower is better)
Translates to: SCTPLAFALCAPMEEVPKLMALK*YTSCIR
Trigger: GCGAATGCAAGAGGTGTACAACTTCAATGCCATTAA...CTTAGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp ACTCATAAGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGTTCAGGAGTGAGCCATaGCTCAAAGCGATAGGAAGA +
Preference number: 5 (lower is better)
Translates to: THKQTFPPALSQTTPKFLFRSEP*LKAIGR
Trigger: TCTTCCTATCGCTTTGAGCAATGGCTCACTCCTGAA...CAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCTTATGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS TCA 90 bp TGTCAGAGTCATATCATAACTCGAAGCAGCTGCCAGTTTATTACATaGAGTGTCAGGCTGTGGACTGCAGGCATGCCATTTTGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CQSHIITRSSCQFIT*SVRLWTAGMPFCLQ
Trigger: TTGAAGACAAAATGGCATGCCTGCAGTCCACAGCCTGACACTTCATGTAATAAACTGGCAGCTGCTTCGAGTTATGATATGACTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537111.6
CDS-3UTR CAA 90 bp CTTTTAAGTCTTTCCCCACCAGCATTGCAGTCACGGGATGCATGCTTGCTTTGTTCTCCAAGAGCATATTaGACTTCTTGTCCATTGATC +
Preference number: 5 (lower is better)
Translates to: LLSLSPPALQSRDACLLCSPRAY*TSCPLI
Trigger: GATCAATGGACAAGAAGTCAAATATGCTCTTGGAGA...ACAAAGCAAGCATGCATCCCGTGACTGCAATGCTGGTGGGGAAAGACTTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS-3UTR CAA 90 bp TACGGTCCTCCCAGATCTTCTGCTATTTTAAGCATAGATTCAGTCTCAGAAAACACATTGGAGAGTGACTaGTCGCCTGCCAGTAGAGTA +
Preference number: 5 (lower is better)
Translates to: YGPPRSSAILSIDSVSENTLESD*SPASRV
Trigger: TACTCTACTGGCAGGCGACAAGTCACTCTCCAATGT...GTTTTCTGAGACTGAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGACCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS-3UTR CAA 90 bp ATCACGAATAGCACTCATAAGTGCCACCAGTTCTTTAGGGACAGACACCTCTGCGGCATTCCAATCAACTaGATTGAGAACATCAACCTT +
Preference number: 5 (lower is better)
Translates to: ITNSTHKCHQFFRDRHLCGIPIN*IENINL
Trigger: AAGGTTGATGTTCTCAATCAAGTTGATTGGAATGCC...GCAGAGGTGTCTGTCCCTAAAGAACTGGTGGCACTTATGAGTGCTATTCGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS GCA 90 bp CCAGTAACTTCTCAACCAAACACTTCTCGGCCTGGCTGTTTAAAGTaGTTTACAAACAAACATGACCAGGCCTCATCTTGTTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: PVTSQPNTSRPGCLK*FTNKHDQASSCFLA
Trigger: AGCTAAGAAACAAGATGAGGCCTGGTCATGTTTGTTTGTAAAGCACTTTAAACAGCCAGGCCGAGAAGTGTTTGGTTGAGAAGTTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 90 bp AGATATGGGTGTTCCTTCCCAGAAGTCTGTTCAGGAGTGAGCCACTaGAGAGCAGAAGATTTTGGAGAGGTCTCAAAAGAAATTTCTATA +
Preference number: 5 (lower is better)
Translates to: RYGCSFPEVCSGVSH*RAEDFGEVSKEISI
Trigger: TATAGAAATTTCTTTTGAGACCTCTCCAAAATCTTCTGCTCTCCAGTGGCTCACTCCTGAACAGACTTCTGGGAAGGAACACCCATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000552789.5
ENST00000553041.5
CDS-3UTR CAA 90 bp CATGCTTGCTTTGTGCTCTTGGTAGGTTCGGACAGCTTGATCATGGGATTTGTCATGCATGGTCGGTACTaGTCTTTTAGAAAGATTTCT +
Preference number: 5 (lower is better)
Translates to: HACFVLLVGSDSLIMGFVMHGRY*SFRKIS
Trigger: AGAAATCTTTCTAAAAGACAAGTACCGACCATGCAT...GACAAATCCCATGATCAAGCTGTCCGAACCTACCAAGAGCACAAAGCAAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS CCA 90 bp AGCAGACTTTTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTaGGCCAATTTGCATTTCTGTAATATTTGTAGGCTTCCAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SRLFHLLFLRPHQSS*ANLHFCNICRLPSS
Trigger: AGAACTTGGAAGCCTACAAATATTACAGAAATGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAAAAGTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS TCA 90 bp CTGTCATGTGCTCGAGTAGTATATGCTAAAGTAGTTGGAATCAGTTaGGCATATTTAGTACATGGCAGGAACAGTTCTAGGCACTCAAGA +
Preference number: 5 (lower is better)
Translates to: LSCARVVYAKVVGIS*AYLVHGRNSSRHSR
Trigger: TCTTGAGTGCCTAGAACTGTTCCTGCCATGTACTAAATATGCTCAACTGATTCCAACTACTTTAGCATATACTACTCGAGCACATGACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS-3UTR CAA 90 bp TACGGTCCTCCCAGATCTTCTGCTATTTTAAGCATAGATTCAGTCTCAGAAAACTCTCCAAGAGCATATTaGACTTCTTGTCCATTGATC +
Preference number: 5 (lower is better)
Translates to: YGPPRSSAILSIDSVSENSPRAY*TSCPLI
Trigger: GATCAATGGACAAGAAGTCAAATATGCTCTTGGAGA...GTTTTCTGAGACTGAATCTATGCTTAAAATAGCAGAAGATCTGGGAGGACCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS TCA 90 bp ATGCCATTTTGTCTTCAAGAACAGGTGGGATCAGAGGTCCTTGACTaGTCAGAATACACTGCTTTCAACCAAAACATTATTAGCATTGAT +
Preference number: 5 (lower is better)
Translates to: MPFCLQEQVGSEVLD*SEYTAFNQNIISID
Trigger: ATCAATGCTAATAATGTTTTGGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 90 bp CAACAAGATGAACAACATCAAGTCCTTGCTGTCATGGATTTTACTTaGTTGTTCCAAACATCTAATCATCTAACAAACCTGCAAGCACCT +
Preference number: 5 (lower is better)
Translates to: QQDEQHQVLAVMDFT*LFQTSNHLTNLQAP
Trigger: AGGTGCTTGCAGGTTTGTTAGATGATTAGATGTTTGGAACAACCAAGTAAAATCCATGACAGCAAGGACTTGATGTTGTTCATCTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 90 bp AATTTCTTGATTTTTGCTCAAAGCGATAGGAAGAGAGATTTCCATTaGCGATCCCTTGTAACTTTGTCTTTCTCCAAGAGCATATTTGAC +
Preference number: 5 (lower is better)
Translates to: NFLIFAQSDRKRDFH*RSLVTLSFSKSIFD
Trigger: GTCAAATATGCTCTTGGAGAAAGACAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTCCTATCGCTTTGAGCAAAAATCAAGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000552789.5
ENST00000553041.5
CDS GCA 72 bp CGGCGAGTAAAGTCGACGCTGCAGCGCAGGTGCAGGTaGTTGGTCCGGCAGACGGAAGCCGGAGAGGCCAAC +
Preference number: 6 (lower is better)
Translates to: RRVKSTLQRRCR*LVRQTEAGEAN
Trigger: GTTGGCCTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS GCA 72 bp AGCGTCCGGCGAGTAAAGTCGACGCTGCAGCGCAGGTaGAGGTGCTTGGTCCGGCAGACGGAAGCCGGAGAG +
Preference number: 6 (lower is better)
Translates to: SVRRVKSTLQRR*RCLVRQTEAGE
Trigger: CTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCGCCGGACGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS CAA 90 bp AGCGTCCGGCGAGTAAAGTCGACGCTGCAGCGCAGGTGCAGGTGCTaGGTCCGGCAGACGGAAGCCGGAGAGGCCAACGAACAGGTATCC +
Preference number: 6 (lower is better)
Translates to: SVRRVKSTLQRRCRC*VRQTEAGEANEQVS
Trigger: GGATACCTGTTCGTTGGCCTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCGCCGGACGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS CAA 72 bp CGAGTAAAGTCGACGCTGCAGCGCAGGTGCAGGTGCTaGGTCCGGCAGACGGAAGCCGGAGAGGCCAACGAA +
Preference number: 6 (lower is better)
Translates to: RVKSTLQRRCRC*VRQTEAGEANE
Trigger: TTCGTTGGCCTCTCCGGCTTCCGTCTGCCGGACCAAGCACCTGCACCTGCGCTGCAGCGTCGACTTTACTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000228740.7
ENST00000548852.5
ENST00000553041.5
CDS TCA 72 bp GGAGGATCACTTGAGCCTGGAAGGCAGAGGGTGCAGTaGGCTAAGATCACATCACTGCACGCCAGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: GGSLEPGRQRVQ*AKITSLHARLS
Trigger: GCTCAGCCTGGCGTGCAGTGATGTGATCTTAGCTCACTGCACCCTCTGCCTTCCAGGCTCAAGTGATCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS GCA 72 bp GCGCCAAAGGAATTGCGTCCTCCCACTTGGATTGAATaGAGAGCCGCAGCCATCCTCTGGAGCGTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: APKELRPPTWIE*RAAAILWSVCA
Trigger: AGCACAGACGCTCCAGAGGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS CCA 72 bp CCAACGAACAGGTATCCACTATCTCGGGCATGGCTCTaGGGGATCACACAGCACAGCGACCTACAGCCCAAC +
Preference number: 6 (lower is better)
Translates to: PTNRYPLSRAWL*GITQHSDLQPN
Trigger: GTTGGGCTGTAGGTCGCTGTGCTGTGTGATCCCCCAGAGCCATGCCCGAGATAGTGGATACCTGTTCGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228740.7
ENST00000548852.5
CDS CCA 72 bp GAGAGGCCAACGAACAGGTATCCACTATCTCGGGCATaGCTCTGGGGGATCACACAGCACAGCGACCTACAG +
Preference number: 6 (lower is better)
Translates to: ERPTNRYPLSRA*LWGITQHSDLQ
Trigger: CTGTAGGTCGCTGTGCTGTGTGATCCCCCAGAGCCATGCCCGAGATAGTGGATACCTGTTCGTTGGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228740.7
ENST00000548852.5
CDS TCA 72 bp TTTAGCGCCAAAGGAATTGCGTCCTCCCACTTGGATTaGATGCAGAGCCGCAGCCATCCTCTGGAGCGTCTG +
Preference number: 6 (lower is better)
Translates to: FSAKGIASSHLD*MQSRSHPLERL
Trigger: CAGACGCTCCAGAGGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS GCA 72 bp CCCAAGCCCATGCATCCTCTTGCCCTCTTCCCTTGTTaGTTTAAAAGACAAACATGCGCCTGTAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PKPMHPLALFPC*FKRQTCACSPS
Trigger: GCTGGGACTACAGGCGCATGTTTGTCTTTTAAAGCAACAAGGGAAGAGGGCAAGAGGATGCATGGGCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS GCA 72 bp GCATTGAAGTTGTACACCTCTTGCATTCGCTTTATGTaGCCCAATGGAAGAGGTGCCCTCTGGAGCGTCTGT +
Preference number: 6 (lower is better)
Translates to: ALKLYTSCIRFM*PNGRGALWSVC
Trigger: ACAGACGCTCCAGAGGGCACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000537111.6
ENST00000547393.5
ENST00000552789.5
ENST00000553041.5
CDS GCA 72 bp TGGAGAGTGGCTGGGAGAAGTCAGAACAGATACAAGTaGACAGTTTGGGTGCCAGAACAGTCTTCCAGGATG +
Preference number: 6 (lower is better)
Translates to: WRVAGRSQNRYK*TVWVPEQSSRM
Trigger: CATCCTGGAAGACTGTTCTGGCACCCAAACTGTGCACTTGTATCTGTTCTGACTTCTCCCAGCCACTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 72 bp TCTGCAGTGGATGGCCTGGCACTGACTAAAGAGATATaGGTGTTCCTTCCCAGAAGTCTGTTCAGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: SAVDGLALTKEI*VFLPRSLFRSE
Trigger: CTCACTCCTGAACAGACTTCTGGGAAGGAACACCCATATCTCTTTAGTCAGTGCCAGGCCATCCACTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000548852.5
ENST00000552789.5
ENST00000553041.5
CDS CCA 72 bp GAAAGCATTAGCAGGCAAGTACTTACTTGGGCTTTATaGGAGGCAGTCCAGGAGAGTAGAGCCAGGCATTCC +
Preference number: 6 (lower is better)
Translates to: ESISRQVLTWAL*EAVQESRARHS
Trigger: GGAATGCCTGGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAAGTAAGTACTTGCCTGCTAATGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 90 bp ACTTCATTCTTCCTTGTTCAGTTGCCATCTTTAGCGCCAAAGGAATaGCGTCCTCCCACTTGGATTGAATGCAGAGCCGCAGCCATCCTC +
Preference number: 6 (lower is better)
Translates to: TSFFLVQLPSLAPKE*RPPTWIECRAAAIL
Trigger: GAGGATGGCTGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAAGATGGCAACTGAACAAGGAAGAATGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS CAA 72 bp TTCCTTGTTCAGTTGCCATCTTTAGCGCCAAAGGAATaGCGTCCTCCCACTTGGATTGAATGCAGAGCCGCA +
Preference number: 6 (lower is better)
Translates to: FLVQLPSLAPKE*RPPTWIECRAA
Trigger: TGCGGCTCTGCATTCAATCCAAGTGGGAGGACGCAATTCCTTTGGCGCTAAAGATGGCAACTGAACAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000537111.6
ENST00000552789.5
ENST00000553041.5
CDS CAA 72 bp GGCTGGGAGAAGTCAGAACAGATACAAGTGCACAGTTaGGGTGCCAGAACAGTCTTCCAGGATGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: GWEKSEQIQVHS*GARTVFQDVKM
Trigger: CATCTTCACATCCTGGAAGACTGTTCTGGCACCCAAACTGTGCACTTGTATCTGTTCTGACTTCTCCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 72 bp GGACTGCAGGCATGCCATTTTGTCTTCAAGAACAGGTaGGATCAGAGGTCCTTGACTGATCAGAATACACTG +
Preference number: 6 (lower is better)
Translates to: GLQACHFVFKNR*DQRSLTDQNTL
Trigger: CAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATGGCATGCCTGCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 72 bp AATGAGAAGGAAAGCATTAGCAGGCAAGTACTTACTTaGGCTTTATGGGAGGCAGTCCAGGAGAGTAGAGCC +
Preference number: 6 (lower is better)
Translates to: NEKESISRQVLT*ALWEAVQESRA
Trigger: GGCTCTACTCTCCTGGACTGCCTCCCATAAAGCCCAAGTAAGTACTTGCCTGCTAATGCTTTCCTTCTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp GGTGATCCAAAAGAAAGGCAACAAGAGAACATGCCATaGAACATGCCATGGTCAGTGTCCTCACACAACTCG +
Preference number: 6 (lower is better)
Translates to: GDPKERQQENMP*NMPWSVSSHNS
Trigger: CGAGTTGTGTGAGGACACTGACCATGGCATGTTCCATGGCATGTTCTCTTGTTGCCTTTCTTTTGGATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 90 bp GTAGACAGGAGGAGAGAAAATAAACTCCCAAGCCCATGCATCCTCTaGCCCTCTTCCCTTGTTGCTTTAAAAGACAAACATGCGCCTGTA +
Preference number: 6 (lower is better)
Translates to: VDRRRENKLPSPCIL*PSSLVALKDKHAPV
Trigger: TACAGGCGCATGTTTGTCTTTTAAAGCAACAAGGGAAGAGGGCAAGAGGATGCATGGGCTTGGGAGTTTATTTTCTCTCCTCCTGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413268.6
CDS CAA 90 bp GATGTCAAGAAATGCTTCCAAGAGGAAGTGGTTCTTGAGCTGAGATaGGAATTAACTGGGCAAAGGGCTCCGGGTAGAGAAAACAGCATG +
Preference number: 6 (lower is better)
Translates to: DVKKCFQEEVVLELR*ELTGQRAPGRENSM
Trigger: CATGCTGTTTTCTCTACCCGGAGCCCTTTGCCCAGTTAATTCCAATCTCAGCTCAAGAACCACTTCCTCTTGGAAGCATTTCTTGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS GCA 72 bp AATGGGAGATTTGACCTGGCCAGGGATGTCAAGAAATaGTTCCAAGAGGAAGTGGTTCTTGAGCTGAGATTG +
Preference number: 6 (lower is better)
Translates to: NGRFDLARDVKK*FQEEVVLELRL
Trigger: CAATCTCAGCTCAAGAACCACTTCCTCTTGGAAGCATTTCTTGACATCCCTGGCCAGGTCAAATCTCCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CAA 72 bp CTCCGGGTAGAGAAAACAGCATGCTCAGGTACTATGTaGGAGGACATATGGGGAGTTCGAGAAACTCCAAAA +
Preference number: 6 (lower is better)
Translates to: LRVEKTACSGTM*EDIWGVRETPK
Trigger: TTTTGGAGTTTCTCGAACTCCCCATATGTCCTCCAACATAGTACCTGAGCATGCTGTTTTCTCTACCCGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CAA 72 bp AAATGCTTCCAAGAGGAAGTGGTTCTTGAGCTGAGATaGGAATTAACTGGGCAAAGGGCTCCGGGTAGAGAA +
Preference number: 6 (lower is better)
Translates to: KCFQEEVVLELR*ELTGQRAPGRE
Trigger: TTCTCTACCCGGAGCCCTTTGCCCAGTTAATTCCAATCTCAGCTCAAGAACCACTTCCTCTTGGAAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS TCA 72 bp CACACAACTCGTGAAAGACCAGGGTTCAGGTCCGATTaGAGGAGGGGGTTCAGTATAAAAAGCAGTATATTG +
Preference number: 6 (lower is better)
Translates to: HTTRERPGFRSD*RRGFSIKSSIL
Trigger: CAATATACTGCTTTTTATACTGAACCCCCTCCTTCAATCGGACCTGAACCCTGGTCTTTCACGAGTTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS GCA 72 bp GGAGAAGTCAGAACAGATACAAGTGCACAGTTTGGGTaGCAGAACAGTCTTCCAGGATGTGAAGATGTGATA +
Preference number: 6 (lower is better)
Translates to: GEVRTDTSAQFG*QNSLPGCEDVI
Trigger: TATCACATCTTCACATCCTGGAAGACTGTTCTGGCACCCAAACTGTGCACTTGTATCTGTTCTGACTTCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS GCA 72 bp CAAAAGAAAGGCAACAAGAGAACATGCCATGGAACATaGCATGGTCAGTGTCCTCACACAACTCGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: QKKGNKRTCHGT*HGQCPHTTRER
Trigger: TCTTTCACGAGTTGTGTGAGGACACTGACCATGGCATGTTCCATGGCATGTTCTCTTGTTGCCTTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp ATAGCACTAAAAAGCCCTAGAATGGGAGATTTGACCTaGCCAGGGATGTCAAGAAATGCTTCCAAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: IALKSPRMGDLT*PGMSRNASKRK
Trigger: CTTCCTCTTGGAAGCATTTCTTGACATCCCTGGCCAGGTCAAATCTCCCATTCTAGGGCTTTTTAGTGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CCA 72 bp GCCTTCTCCACTCCTAAACTTCCTGGAACTGTCTTTTaGCTATATCAGGCCCCTGAAGTTAGAGTCTTTGAA +
Preference number: 6 (lower is better)
Translates to: AFSTPKLPGTVF*LYQAPEVRVFE
Trigger: TTCAAAGACTCTAACTTCAGGGGCCTGATATAGCCAAAAGACAGTTCCAGGAAGTTTAGGAGTGGAGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp GCCATTGCTCAAAGCGATAGGAAGAGAGATTTCCATTaGCGATCCCTTGTAACTTTGTCTTTCTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: AIAQSDRKRDFH*RSLVTLSFSKS
Trigger: GCTCTTGGAGAAAGACAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTCCTATCGCTTTGAGCAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548852.5
CDS CAA 72 bp TCGACGAGTCTTAACTGGGATATGCATGGTCGGTACTaGTCTTTTAGAAAGATTTCTCTGTGGCAGCATGGG +
Preference number: 6 (lower is better)
Translates to: STSLNWDMHGRY*SFRKISLWQHG
Trigger: CCCATGCTGCCACAGAGAAATCTTTCTAAAAGACAAGTACCGACCATGCATATCCCAGTTAAGACTCGTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413268.6
ENST00000552789.5
CDS CAA 90 bp TGCAAGAAGTCGACGAGTCTTAACTGGGATATGCATGGTCGGTACTaGTCTTTTAGAAAGATTTCTCTGTGGCAGCATGGGAGACAGATT +
Preference number: 6 (lower is better)
Translates to: CKKSTSLNWDMHGRY*SFRKISLWQHGRQI
Trigger: AATCTGTCTCCCATGCTGCCACAGAGAAATCTTTCTAAAAGACAAGTACCGACCATGCATATCCCAGTTAAGACTCGTCGACTTCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413268.6
ENST00000552789.5
CDS GCA 72 bp AAGGCTGCAAGAAGTCGACGAGTCTTAACTGGGATATaGATGGTCGGTACTTGTCTTTTAGAAAGATTTCTC +
Preference number: 6 (lower is better)
Translates to: KAARSRRVLTGI*MVGTCLLERFL
Trigger: GAGAAATCTTTCTAAAAGACAAGTACCGACCATGCATATCCCAGTTAAGACTCGTCGACTTCTTGCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413268.6
ENST00000552789.5
CDS CCA 72 bp TTAAAGGTTTACTCTAGCTTTAGTGTGGAGAGTGGCTaGGAGAAGTCAGAACAGATACAAGTGCACAGTTTG +
Preference number: 6 (lower is better)
Translates to: LKVYSSFSVESG*EKSEQIQVHSL
Trigger: CAAACTGTGCACTTGTATCTGTTCTGACTTCTCCCAGCCACTCTCCACACTAAAGCTAGAGTAAACCTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CAA 90 bp CAGGCATGCCATTTTGTCTTCAAGAACAGGTGGGATCAGAGGTCCTaGACTGATCAGAATACACTGCTTTCAACCAAAACATTATTAGCA +
Preference number: 6 (lower is better)
Translates to: QACHFVFKNRWDQRS*TDQNTLLSTKTLLA
Trigger: TGCTAATAATGTTTTGGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATGGCATGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS TCA 72 bp CTGTTTAGTGTAAGAGAAGCTGGTAGGCAATTTTGGTaGTCCAAAAGAAAGGCAACAAGAGAACATGCCATG +
Preference number: 6 (lower is better)
Translates to: LFSVREAGRQFW*SKRKATREHAM
Trigger: CATGGCATGTTCTCTTGTTGCCTTTCTTTTGGATCACCAAAATTGCCTACCAGCTTCTCTTACACTAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp ATTTTTGCTCAAAGCGATAGGAAGAGAGATTTCCATTaGCGATCCCTTGTAACTTTGTCTTTCTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: IFAQSDRKRDFH*RSLVTLSFSKS
Trigger: GCTCTTGGAGAAAGACAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTCCTATCGCTTTGAGCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000552789.5
ENST00000553041.5
CDS CCA 72 bp TTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTaGGCCAATTTGCATTTCTGTAATATTTGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: FHLLFLRPHQSS*ANLHFCNICRL
Trigger: AAGCCTACAAATATTACAGAAATGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 72 bp AGGAAGAGAGATTTCCATTGGCGATCCCTTGTAACTTaGTCTTTCTCCAAGAGCATATTTGACTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: RKRDFHWRSLVT*SFSKSIFDFLS
Trigger: GGACAAGAAGTCAAATATGCTCTTGGAGAAAGACAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000548852.5
ENST00000552789.5
ENST00000553041.5
CDS CAA 72 bp CATTTTGTCTTCAAGAACAGGTGGGATCAGAGGTCCTaGACTGATCAGAATACACTGCTTTCAACCAAAACA +
Preference number: 6 (lower is better)
Translates to: HFVFKNRWDQRS*TDQNTLLSTKT
Trigger: TGTTTTGGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS CAA 72 bp ACATCAGGGTCTATATCTGTCAGATCAACCACAAGTTaGGTGAAAGGATGTGTCTCCCCAAATGTCTTTACT +
Preference number: 6 (lower is better)
Translates to: TSGSISVRSTTS*VKGCVSPNVFT
Trigger: AGTAAAGACATTTGGGGAGACACATCCTTTCACCAAACTTGTGGTTGATCTGACAGATATAGACCCTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547982.1
ENST00000548375.5
CDS CAA 90 bp CAAAGCGATAGGAAGAGAGATTTCCATTGGCGATCCCTTGTAACTTaGTCTTTCTCCAAGAGCATATTTGACTTCTTGTCCATTGATCAC +
Preference number: 6 (lower is better)
Translates to: QSDRKRDFHWRSLVT*SFSKSIFDFLSIDH
Trigger: GTGATCAATGGACAAGAAGTCAAATATGCTCTTGGAGAAAGACAAAGTTACAAGGGATCGCCAATGGAAATCTCTCTTCCTATCGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000548852.5
ENST00000552789.5
ENST00000553041.5
CDS CAA 90 bp ATGATGTACCTGAATCGTATTTCAGAATTGTTAATGGCATTGAAGTaGTACACCTCTTGCATTCGCTTTATGTGCCCCAATGGAAGAGGT +
Preference number: 6 (lower is better)
Translates to: MMYLNRISELLMALK*YTSCIRFMCPNGRG
Trigger: ACCTCTTCCATTGGGGCACATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAAATACGATTCAGGTACATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547393.5
CDS TCA 72 bp TGTCTTCAAGAACAGGTGGGATCAGAGGTCCTTGACTaGTCAGAATACACTGCTTTCAACCAAAACATTATT +
Preference number: 6 (lower is better)
Translates to: CLQEQVGSEVLD*SEYTAFNQNII
Trigger: AATAATGTTTTGGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS TCA 72 bp ATTTTGTCTTCAAGAACAGGTGGGATCAGAGGTCCTTaGCTGATCAGAATACACTGCTTTCAACCAAAACAT +
Preference number: 6 (lower is better)
Translates to: ILSSRTGGIRGP*LIRIHCFQPKH
Trigger: ATGTTTTGGTTGAAAGCAGTGTATTCTGATCAGTCAAGGACCTCTGATCCCACCTGTTCTTGAAGACAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537111.6
ENST00000553041.5
CDS TCA 72 bp GCTCGAGTAGTATATGCTAAAGTAGTTGGAATCAGTTaGGCATATTTAGTACATGGCAGGAACAGTTCTAGG +
Preference number: 6 (lower is better)
Translates to: ARVVYAKVVGIS*AYLVHGRNSSR
Trigger: CCTAGAACTGTTCCTGCCATGTACTAAATATGCTCAACTGATTCCAACTACTTTAGCATATACTACTCGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 72 bp GGCACTCAAGACAACAAGATGAACAACATCAAGTCCTaGCTGTCATGGATTTTACTTGGTTGTTCCAAACAT +
Preference number: 6 (lower is better)
Translates to: GTQDNKMNNIKS*LSWILLGCSKH
Trigger: ATGTTTGGAACAACCAAGTAAAATCCATGACAGCAAGGACTTGATGTTGTTCATCTTGTTGTCTTGAGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 90 bp TTCCACCTGCTCTTTCTCAGACCACACCAAAGTTCTTGGGCCAATTaGCATTTCTGTAATATTTGTAGGCTTCCAAGTTCTTTAATATAT +
Preference number: 6 (lower is better)
Translates to: FHLLFLRPHQSSWAN*HFCNICRLPSSLIY
Trigger: ATATATTAAAGAACTTGGAAGCCTACAAATATTACAGAAATGCAAATTGGCCCAAGAACTTTGGTGTGGTCTGAGAAAGAGCAGGTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp GAACAACATCAAGTCCTTGCTGTCATGGATTTTACTTaGTTGTTCCAAACATCTAATCATCTAACAAACCTG +
Preference number: 6 (lower is better)
Translates to: EQHQVLAVMDFT*LFQTSNHLTNL
Trigger: CAGGTTTGTTAGATGATTAGATGTTTGGAACAACCAAGTAAAATCCATGACAGCAAGGACTTGATGTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CCA 72 bp GACAACAAGATGAACAACATCAAGTCCTTGCTGTCATaGATTTTACTTGGTTGTTCCAAACATCTAATCATC +
Preference number: 6 (lower is better)
Translates to: DNKMNNIKSLLS*ILLGCSKHLII
Trigger: GATGATTAGATGTTTGGAACAACCAAGTAAAATCCATGACAGCAAGGACTTGATGTTGTTCATCTTGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 72 bp CAACATCAAGTCCTTGCTGTCATGGATTTTACTTGGTaGTTCCAAACATCTAATCATCTAACAAACCTGCAA +
Preference number: 6 (lower is better)
Translates to: QHQVLAVMDFTW*FQTSNHLTNLQ
Trigger: TTGCAGGTTTGTTAGATGATTAGATGTTTGGAACAACCAAGTAAAATCCATGACAGCAAGGACTTGATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553041.5
CDS CAA 90 bp CGATCCCTTGTAACTTTGTCTTTCTCCAAGAGCATATTTGACTTCTaGTCCATTGATCACTACTTTTTCTATTGTAAGGTCCTTTGTATC +
Preference number: 6 (lower is better)
Translates to: RSLVTLSFSKSIFDF*SIDHYFFYCKVLCI
Trigger: GATACAAAGGACCTTACAATAGAAAAAGTAGTGATCAATGGACAAGAAGTCAAATATGCTCTTGGAGAAAGACAAAGTTACAAGGGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000228740.7
ENST00000413268.6
ENST00000548852.5
ENST00000552789.5
ENST00000553041.5
CDS CAA 90 bp CCACAGAGACAAGTTAAAATGATGTACCTGAATCGTATTTCAGAATaGTTAATGGCATTGAAGTTGTACACCTCTTGCATTCGCTTTATG +
Preference number: 6 (lower is better)
Translates to: PQRQVKMMYLNRISE*LMALKLYTSCIRFM
Trigger: CATAAAGCGAATGCAAGAGGTGTACAACTTCAATGCCATTAACAATTCTGAAATACGATTCAGGTACATCATTTTAACTTGTCTCTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547393.5
CDS TCA 72 bp TTATTTTGCTACCTTTCCTCTGTCCTAGCTCTAAAATaGAGATCCTCTAAGGTTCTACAGTTTACTTCTTGT +
Preference number: 6 (lower is better)
Translates to: LFCYLSSVLALK*RSSKVLQFTSC
Trigger: ACAAGAAGTAAACTGTAGAACCTTAGAGGATCTTCATTTTAGAGCTAGGACAGAGGAAAGGTAGCAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547982.1
ENST00000553041.5