RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LSS (Homo sapiens)

Ensembl gene IDs: ENSG00000160285

Ensembl transcript IDs: ENST00000356396.8, ENST00000397728.8, ENST00000419093.5, ENST00000450351.1, ENST00000457828.6, ENST00000464357.1, ENST00000472272.1, ENST00000474319.1, ENST00000484808.1, ENST00000491729.1, ENST00000522411.5, ENST00000625491.1, ENST00000625576.2, ENST00000625682.1, ENST00000625922.1, ENST00000626535.1, ENST00000627118.2, ENST00000630343.2, ENST00000630702.1, ENST00000630761.2

Found 1059 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTaGCATACCTGCCAGCCAGCCCAGGGAGTGGTGATGGGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: AAAVGVPWVYAGLPG*HTCQPAQGVVMGWV
Trigger: CACCCAGCCCATCACCACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp CCTGGGCATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATaGCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCCAGGGAGT +
Preference number: 1 (lower is better)
Translates to: PGHETGGSRRGALGI*RAPRVPYLPASPGS
Trigger: ACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCATGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 90 bp AGCACCCACCTGGGCATGAGACTGGCGGCAGCCGTAGGGGTGCCCTaGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCC +
Preference number: 1 (lower is better)
Translates to: STHLGMRLAAAVGVP*VYAGLPGCHTCQPA
Trigger: GGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCATGCCCAGGTGGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 90 bp CCCTGCAGGGCTCTGAGCAGGCAGGCGAGTCCCAAGGAGAGTCAGTaGCAGCACATGGGGCAAGGGAGCTGGACAGAAGACCCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: PCRALSRQASPKESQ*QHMGQGSWTEDPRG
Trigger: CCCTCTGGGGTCTTCTGTCCAGCTCCCTTGCCCCATGTGCTGTCACTGACTCTCCTTGGGACTCGCCTGCCTGCTCAGAGCCCTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp CCCTCGTGTCCCTCAGCCCAGCAGACAAAAGGTGCAGGAGAAGCCTaGCCAGGGCCGACCCCAGCCCAGAGCCCACTCGACACTAAGGAA +
Preference number: 1 (lower is better)
Translates to: PSCPSAQQTKGAGEA*PGPTPAQSPLDTKE
Trigger: TTCCTTAGTGTCGAGTGGGCTCTGGGCTGGGGTCGGCCCTGGGCAGGCTTCTCCTGCACCTTTTGTCTGCTGGGCTGAGGGACACGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp AGCCAGACCAGACTGGGTCAGAGGCTAGAAGGGAGCTCACAGGATTaGCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCGCTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: SQTRLGQRLEGSSQD*LGKPRPKTWPSLQP
Trigger: GGGCTGGAGCGAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTCTGACCCAGTCTGGTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 90 bp GATCTGAGGGTGTCCAGACGCAGATCTCCACTGCCTGAGGGAGAGTaGTCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAG +
Preference number: 1 (lower is better)
Translates to: DLRVSRRRSPLPEGE*SARGRGQGLLPAQK
Trigger: CTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTCTGGACACCCTCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 90 bp GCAATGACAGGATCTGAGGGTGTCCAGACGCAGATCTCCACTGCCTaGGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACC +
Preference number: 1 (lower is better)
Translates to: AMTGSEGVQTQISTA*GRVISQGERPGTAT
Trigger: GGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTCTGGACACCCTCAGATCCTGTCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp AGAAGGCGGCAGGGAGGGGAAGAGCAGATAAGGAGGTATAGGGTGTaGCCTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCC +
Preference number: 1 (lower is better)
Translates to: RRRQGGEEQIRRYRV*PGQGSRGNEALSDS
Trigger: GGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAGGGCACACCCTATACCTCCTTATCTGCTCTTCCCCTCCCTGCCGCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 90 bp TCCCTGCTGCACGGCCTCAGGATGCTCCATGAGCAACCCCCGCACTaGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTG +
Preference number: 1 (lower is better)
Translates to: SLLHGLRMLHEQPPH*AIHGCTLPAIVTGL
Trigger: CAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAGGCCGTGCAGCAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp CTCAGGATGCTCCATGAGCAACCCCCGCACTGGGCTATTCACGGATaGACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCTCA +
Preference number: 1 (lower is better)
Translates to: LRMLHEQPPHWAIHG*TLPAIVTGLPSCPS
Trigger: TGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp ACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTaGCCTCGTGTCCCTCAGCCCAGCAGACAAAAGGTGCAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: TGLFTDAHYLPLSQG*PRVPQPSRQKVQEK
Trigger: CTTCTCCTGCACCTTTTGTCTGCTGGGCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGG +
Preference number: 1 (lower is better)
Translates to: PSDRGCTGTAAISSW*CPLSRACQGDESSG
Trigger: CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
3UTR TCA 90 bp CTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATaGACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCC +
Preference number: 1 (lower is better)
Translates to: LCPLPHPSPTSYFQK*TYSKNQESKPPTLS
Trigger: GGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR GCA 90 bp CCCAACACAGTTCCTTCAGCGAAAATAAAGCCCAGTTTTAAGATGTaGAGGGAAGTGTTGACACTGAACAGGCAGCTGACCAAGCCCTGC +
Preference number: 1 (lower is better)
Translates to: PNTVPSAKIKPSFKM*REVLTLNRQLTKPC
Trigger: GCAGGGCTTGGTCAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACATCTTAAAACTGGGCTTTATTTTCGCTGAAGGAACTGTGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 90 bp TCTCTTAAAATATCTGTTTTCCCTCAGGTAACTGGAGACGCACCCTaGTACTCCTCACGTCACTCTTGTTCCCTAAACCAGGCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: SLKISVFPQVTGDAP*YSSRHSCSLNQAGP
Trigger: AGGCCCAGCCTGGTTTAGGGAACAAGAGTGACGTGAGGAGTAGCAGGGTGCGTCTCCAGTTACCTGAGGGAAAACAGATATTTTAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 2 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 2 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: LRESDQPGGEARDCYLPRGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCGGGCTCCCAGGGTaGCATACCTGCCAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: EARRELTGLPGEASAQNLAGLPG*HTCQPA
Trigger: GGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGC...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAACCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: GRVISQGERPGTATCPEGPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCGGATGCACACTACCTaGCATTGTCACAGGGTTGCC +
Preference number: 2 (lower is better)
Translates to: RGALGICRAPRVPYLPASRMHTT*HCHRVA
Trigger: GGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGACTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: LRESDQPGGEARDCYLPRLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 2 (lower is better)
Translates to: GHGSCAPFLTQARQATFRTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAACCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 2 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCATGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 2 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGCCTCACCCCTGGTTATaGTCGGCCTCCCCTGTGCAT +
Preference number: 2 (lower is better)
Translates to: EARRELTGLPGEASAQNLPHPWL*SASPVH
Trigger: ATGCACAGGGGAGGCCGAGCATAACCAGGGGTGAGG...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCGTAAGTGTCCCCTGTaGATTTCTGTGTCCACAAGA +
Preference number: 2 (lower is better)
Translates to: RGALGICRAPRVPYLPASRKCPL*ISVSTR
Trigger: TCTTGTGGACACAGAAATGCACAGGGGACACTTACG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 2 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CAA 90 bp AGCAACCCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGTGTCCCTCAGCCCAGCAGACAAAAG +
Preference number: 2 (lower is better)
Translates to: SNPRTGLFTDAHYLP*SQGCPRVPQPSRQK
Trigger: CTTTTGTCTGCTGGGCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGCTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 2 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 2 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGATGGGCTATTCACGGATaGACACTACCTGCCATTGTC +
Preference number: 2 (lower is better)
Translates to: LRESDQPGGEARDCYLPRWAIHG*TLPAIV
Trigger: GACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCA...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAATTCCCTAAACCAGGCTaGGCCTCCCACTCGCCCCAC +
Preference number: 2 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQFPKPG*ASHSPH
Trigger: GTGGGGCGAGTGGGAGGCCCAGCCTGGTTTAGGGAA...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CAA 90 bp CACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTaGCCCTCGTGTCCCTCAGCCCAGCAGACAAAAGGTGCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: HWAIHGCTLPAIVTG*PSCPSAQQTKGAGE
Trigger: TTCTCCTGCACCTTTTGTCTGCTGGGCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR TCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAATCGCTGCGTCCTGTaGCTTGAAGGCCATGGAACG +
Preference number: 2 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSNRCVL*LEGHGT
Trigger: CGTTCCATGGCCTTCAAGTCACAGGACGCAGCGATT...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
3UTR-3UTR TCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAATCGCTGCGTCCTGTaGCTTGAAGGCCATGGAACG +
Preference number: 2 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSNRCVL*LEGHGT
Trigger: CGTTCCATGGCCTTCAAGTCACAGGACGCAGCGATT...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
3UTR-3UTR GCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 2 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAACCAGGGTGCCATACCTaGCAGCCAGCCCAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKPGCHT*QPAQGV
Trigger: CACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGG...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAAGAGGGTGCGGCACCTaGGTGAGAGCCCTGGACTGC +
Preference number: 2 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKRGCGT*VRALDC
Trigger: GCAGTCCAGGGCTCTCACCCAGGTGCCGCACCCTCT...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CAA 90 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCAC +
Preference number: 2 (lower is better)
Translates to: RGCTGTAAISSWWCP*SRACQGDESSGTGH
Trigger: GTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR TCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAATCGCTGCGTCCTGTaGCTTGAAGGCCACTGTGAA +
Preference number: 2 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVNRCVL*LEGHCE
Trigger: TTCACAGTGGCCTTCAAGTCACAGGACGCAGCGATT...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 2 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAATCACACAGGCACAGCTaGTCCTCTCCCAAGAACTCA +
Preference number: 2 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQSHRHS*SSPKNS
Trigger: TGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGA...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR TCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAAATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 2 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEEIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAGCCCCTGAAGGACTCTaGGCAGGCAATGACAGGATC +
Preference number: 2 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKAPEGL*AGNDRI
Trigger: GATCCTGTCATTGCCTGCCCAGAGTCCTTCAGGGGC...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CAA 90 bp CCTTCAGCGAAAATAAAGCCCAGTTTTAAGATGTGCAGGGAAGTGTaGACACTGAACAGGCAGCTGACCAAGCCCTGCAGGGCTCTGAGC +
Preference number: 2 (lower is better)
Translates to: PSAKIKPSFKMCREV*TLNRQLTKPCRALS
Trigger: GCTCAGAGCCCTGCAGGGCTTGGTCAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACATCTTAAAACTGGGCTTTATTTTCGCTGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACAGAAACCCCAAATCTaGAGTTCTCCCCAGGATGAA +
Preference number: 2 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQQKPQI*SSPQDE
Trigger: TTCATCCTGGGGAGAACTGCAGATTTGGGGTTTCTG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR GCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 2 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 2 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR TCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 2 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 2 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR TCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 2 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 2 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR GCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTTTCCATGACAGACCCTaGATATGCAGGCGAGCTCAC +
Preference number: 2 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIFHDRP*ICRRAH
Trigger: GTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAA...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp GAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATaGCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGC +
Preference number: 3 (lower is better)
Translates to: ETGGSRRGALGI*RAPRVPYLPAS
Trigger: GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 72 bp GTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAGACGGCACCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: VMGGLPNPARTP*PHWNAQTAPSR
Trigger: CCTGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR CCA 72 bp CTGGGCATGAGACTGGCGGCAGCCGTAGGGGTGCCCTaGGTATATGCCGGGCTCCCAGGGTGCCATACCTGC +
Preference number: 3 (lower is better)
Translates to: LGMRLAAAVGVP*VYAGLPGCHTC
Trigger: GCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCATGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 72 bp CATACCTGCCAGCCAGCCCAGGGAGTGGTGATGGGCTaGGTGCTGGCTGTCCCTGCACATAGCAGTGCCCCG +
Preference number: 3 (lower is better)
Translates to: HTCQPAQGVVMG*VLAVPAHSSAP
Trigger: CGGGGCACTGCTATGTGCAGGGACAGCCAGCACCCAGCCCATCACCACTCCCTGGGCTGGCTGGCAGGTATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 72 bp GGATCTGAGGGTGTCCAGACGCAGATCTCCACTGCCTaGGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: GSEGVQTQISTA*GRVISQGERPG
Trigger: CCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTCTGGACACCCTCAGATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp GAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGCCCGACAAGCTACTTT +
Preference number: 3 (lower is better)
Translates to: EGAVPPQGSRLL*PLPHPSPTSYF
Trigger: AAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CAA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCCCCTGCTGCACAGACTaGGGATGTTCCATGACAGAC +
Preference number: 3 (lower is better)
Translates to: GRVISQGERPGTATCPEGPCCTD*GCSMTD
Trigger: GTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGG...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp AGACTGGGTCAGAGGCTAGAAGGGAGCTCACAGGATTaGCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: RLGQRLEGSSQD*LGKPRPKTWPS
Trigger: CGAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTCTGACCCAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 72 bp GCCCCTGAAGGACTCTGGGCAGGCAATGACAGGATCTaGGGGTGTCCAGACGCAGATCTCCACTGCCTGAGG +
Preference number: 3 (lower is better)
Translates to: APEGLWAGNDRI*GCPDADLHCLR
Trigger: CCTCAGGCAGTGGAGATCTGCGTCTGGACACCCTCAGATCCTGTCATTGCCTGCCCAGAGTCCTTCAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp ACCCCCGCACTGGGCTATTCACGGATGCACACTACCTaGCATTGTCACAGGGTTGCCCTCGTGTCCCTCAGC +
Preference number: 3 (lower is better)
Translates to: TPALGYSRMHTT*HCHRVALVSLS
Trigger: GCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp GAAGTGTTGACACTGAACAGGCAGCTGACCAAGCCCTaGAGGGCTCTGAGCAGGCAGGCGAGTCCCAAGGAG +
Preference number: 3 (lower is better)
Translates to: EVLTLNRQLTKP*RALSRQASPKE
Trigger: CTCCTTGGGACTCGCCTGCCTGCTCAGAGCCCTGCAGGGCTTGGTCAGCTGCCTGTTCAGTGTCAACACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp CTGCTCAGGGCAGACTCTGTGATTCACTGTCTGTCCTaGTGCTACCCCACGTGGGGGAGAACACGTGGGCTG +
Preference number: 3 (lower is better)
Translates to: LLRADSVIHCLS*CYPTWGRTRGL
Trigger: CAGCCCACGTGTTCTCCCCCACGTGGGGTAGCAGCAGGACAGACAGTGAATCACAGAGTCTGCCCTGAGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CAA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 3 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR GCA 72 bp CTCCATGAGCAACCCCCGCACTGGGCTATTCACGGATaGACACTACCTGCCATTGTCACAGGGTTGCCCTCG +
Preference number: 3 (lower is better)
Translates to: LHEQPPHWAIHG*TLPAIVTGLPS
Trigger: CGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTCATGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp CAGGGAGGGGAAGAGCAGATAAGGAGGTATAGGGTGTaGCCTGGGCAAGGCAGCAGGGGTAACGAAGCTCTC +
Preference number: 3 (lower is better)
Translates to: QGGEEQIRRYRV*PGQGSRGNEAL
Trigger: GAGAGCTTCGTTACCCCTGCTGCCTTGCCCAGGGCACACCCTATACCTCCTTATCTGCTCTTCCCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp CTCAGGGCAGACTCTGTGATTCACTGTCTGTCCTGCTaGTACCCCACGTGGGGGAGAACACGTGGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: LRADSVIHCLSC*YPTWGRTRGLR
Trigger: TCTCAGCCCACGTGTTCTCCCCCACGTGGGGTAGCAGCAGGACAGACAGTGAATCACAGAGTCTGCCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR CCA 72 bp CACGGCCTCAGGATGCTCCATGAGCAACCCCCGCACTaGGCTATTCACGGATGCACACTACCTGCCATTGTC +
Preference number: 3 (lower is better)
Translates to: HGLRMLHEQPPH*AIHGCTLPAIV
Trigger: GACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAGGCCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CAA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGCTGCGTCCTGTGACTaGAAGGCCATGGAACGCACA +
Preference number: 3 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIAASCD*KAMERT
Trigger: TGTGCGTTCCATGGCCTTCAAGTCACAGGACGCAGC...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
3UTR-3UTR CAA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAAATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 3 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CAA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAACCCTGCTGCACAGACTaGGGATGTTCCATGACAGAC +
Preference number: 3 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEPCCTD*GCSMTD
Trigger: GTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGG...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR GCA 72 bp TTCACGGATGCACACTACCTGCCATTGTCACAGGGTTaGCCTCGTGTCCCTCAGCCCAGCAGACAAAAGGTG +
Preference number: 3 (lower is better)
Translates to: FTDAHYLPLSQG*PRVPQPSRQKV
Trigger: CACCTTTTGTCTGCTGGGCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CAA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 3 (lower is better)
Translates to: RGALGICRAPRVPYLPASPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CAA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGT +
Preference number: 3 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRAHYLP*SQGCPR
Trigger: ACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGC...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CCA 72 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAG +
Preference number: 3 (lower is better)
Translates to: RGCTGTAAISSW*CPLSRACQGDE
Trigger: CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
3UTR GCA 72 bp AGAAGACTGAAGGCAGGGATACTGACACTGAAGTCCTaGCTGTGTAATAACACCGAAGAGGGCAGGGAATCG +
Preference number: 3 (lower is better)
Translates to: RRLKAGILTLKS*LCNNTEEGRES
Trigger: CGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTTCAGTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR GCA 72 bp AGGCAGGTGACGTATGACAGCCAGAAACCCCAAATCTaGAGTTCTCCCCAGGATGAAACGAAACACAGTGTG +
Preference number: 3 (lower is better)
Translates to: RQVTYDSQKPQI*SSPQDETKHSV
Trigger: CACACTGTGTTTCGTTTCATCCTGGGGAGAACTGCAGATTTGGGGTTTCTGGCTGTCATACGTCACCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CAA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 3 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
3UTR-3UTR CAA 90 bp ATTTCTGTGTCCGTAAGTGTCCCCTGTGCATTTCTGTGTCCACAAGACTACTATGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGT +
Preference number: 3 (lower is better)
Translates to: ISVSVSVPCAFLCPQDYYAHYLP*SQGCPR
Trigger: ACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGC...ATAGTAGTCTTGTGGACACAGAAATGCACAGGGGACACTTACGGACACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR TCA 72 bp GAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAAGTCCTCTTCGTGGAA +
Preference number: 3 (lower is better)
Translates to: EADGGGTDSSAL*SNCEQKVLFVE
Trigger: TTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR GCA 72 bp ATATCTGTTTTCCCTCAGGTAACTGGAGACGCACCCTaGTACTCCTCACGTCACTCTTGTTCCCTAAACCAG +
Preference number: 3 (lower is better)
Translates to: ISVFPQVTGDAP*YSSRHSCSLNQ
Trigger: CTGGTTTAGGGAACAAGAGTGACGTGAGGAGTAGCAGGGTGCGTCTCCAGTTACCTGAGGGAAAACAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR-3UTR CAA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCACCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 3 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR-3UTR CAA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 3 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR TCA 72 bp TTACATTTCATTTCTGGAAAACCGTTTTGTACAGTCTaGCCATGGCTAGGAGTCCCAGGGACAGCAGCCTCT +
Preference number: 3 (lower is better)
Translates to: LHFISGKPFCTV*PWLGVPGTAAS
Trigger: AGAGGCTGCTGTCCCTGGGACTCCTAGCCATGGTCAGACTGTACAAAACGGTTTTCCAGAAATGAAATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
3UTR-3UTR CAA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 3 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSISWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPGPSRS*VASGRG
Trigger: ACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCC...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR TCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGGCGCCGCAGACACCTaGGGACCACCGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLGAADT*GPPAIS
Trigger: GCTGATGGCCGGTGGTCCTCAGGTGTCTGCGGCGCC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCGCCGGGCTCCCAGGGTaGCATACCTGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASAGLPG*HTCQPA
Trigger: GGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGC...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKFCTAR*RRWALW
Trigger: CCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCAGCGGCCGAGGTCGGTaGCGGGCTCGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLSGRGR*RARSCR
Trigger: CCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCT...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCAGCGGCCGAGGTCGGTaGCGGGCTCGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGSGRGR*RARSCR
Trigger: CCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCT...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCCTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSLSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCCTCAGGATGCTCCATaGGCAACCCCCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKPQDAP*ATPALG
Trigger: GCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAGG...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGGCCAGGGGAGAGCAGTaGCAGTCTCAGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKARGEQ*QSQVAL
Trigger: CAGGGCCACCTGAGACTGTCACTGCTCTCCCCTGGC...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCCTGCCTGAGGGAGAGTaGTCAGCCAGGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPLPEGE*SARGRG
Trigger: GCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAG...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGGTGCGGCACCTGGGTaGGAGCCCTGGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPGAAPG*EPWTAH
Trigger: GTGTGCAGTCCAGGGCTCTCACCCAGGTGCCGCACC...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCGGTGCGGCACCTGGGTaGGAGCCCTGGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGGAAPG*EPWTAH
Trigger: GTGTGCAGTCCAGGGCTCTCACCCAGGTGCCGCACC...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCTCTACGCCGCCCACTaGCAGCTGCCAGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASLYAAH*QLPDVR
Trigger: GCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGC +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSALRHC*CSALRR
Trigger: GCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCGGCGCCGCAGACACGTaGCCTCCGTCATTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPGAADT*PPSLLL
Trigger: CAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCC...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000522411.5
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPFCTAR*RRWALW
Trigger: CCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHNSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCTGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCCATGGGGCTCCCTGCTaGACGGCCTCAGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLHGAPC*TASGCS
Trigger: GGAGCATCCTGAGGCCGTGCAGCAGGGAGCCCCATG...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGATCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCGGCCCAAAACCTaGCCCTCGCTCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTPRPKT*PSLQPR
Trigger: TCTGGGCTGGAGCGAGGGCCAGGTTTTGGGCCGAGG...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCAGAGGGTGCGGCACCTaGGTGAGAGCCCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTRGCGT*VRALDC
Trigger: GCAGTCCAGGGCTCTCACCCAGGTGCCGCACCCTCT...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTGCAGAGGGGTGCCCCTaGAGGACTCTGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAAEGCP*RTLGRQ
Trigger: TTGCCTGCCCAGAGTCCTTCAGGGGCACCCCTCTGC...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGCAGAGGGGTGCCCCTaGAGGACTCTGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGAEGCP*RTLGRQ
Trigger: TTGCCTGCCCAGAGTCCTTCAGGGGCACCCCTCTGC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCTGCACGGCCTCAGGATaGTCCATGAGCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPCTASG*SMSNPR
Trigger: GCGGGGGTTGCTCATGGAGCATCCTGAGGCCGTGCA...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCCAGCTGACCAAGCCCTaGAGGGCTCTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPQLTKP*RALSRQ
Trigger: CTGCCTGCTCAGAGCCCTGCAGGGCTTGGTCAGCTG...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGCGAGGGGACTCACGTaGCCTCCGTCATTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLARGLT*PPSLLL
Trigger: CAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCCGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAATCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEESWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTTCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYLSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAAGAGGGTGCGGCACCTaGGTGAGAGCCCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQRGCGT*VRALDC
Trigger: GCAGTCCAGGGCTCTCACCCAGGTGCCGCACCCTCT...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRGPSRS*VASGRG
Trigger: ACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR TCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCAGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGACCAGGTGCCGTAGGTaGAGCAAACTCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKTRCRR*SKLPRS
Trigger: GCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGT...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCTAGCCTCACTACCTTaGGGCCGTGCCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYLASLP*GRAQRW
Trigger: CCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCTAG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCTAGCCTCACTACCTTaGGGCCGTGCCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPLASLP*GRAQRW
Trigger: CCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCTAG...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGCTGCCTGAGGGAGAGTaGTCAGCCAGGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRLPEGE*SARGRG
Trigger: GCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAG...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGCCGCCCACTGCCAGCTaGCAGATGTCCGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLPPTAS*QMSAPG
Trigger: CCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGG...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPLRHCC*SALRRP
Trigger: TGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGC +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGALRHC*CSALRR
Trigger: GCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGRALRH*CCSALR
Trigger: GCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACG...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCACCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGGGTCACGGCTCCTGTaGCCCCTTCCTCACCCAAGC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQGSRLL*PLPHPS
Trigger: GCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCC...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGGGTGCCCTGGGTATATaGCGGGCTCCCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRGALGI*RAPRVP
Trigger: TGGCACCCTGGGAGCCCGGCATATACCCAGGGCACC...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGAGGAGGTATAGGGTGTaGCCTGGGCAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGRRYRV*PGQGSR
Trigger: CCTGCTGCCTTGCCCAGGGCACACCCTATACCTCCT...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGACCAGGGACTGCTACCTaGCCAGAAGGCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRPGTAT*PEGGRE
Trigger: CTCCCTGCCGCCTTCTGGGCAGGTAGCAGTCCCTGG...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCGGGATGCGTGCCACGTaGCAAGTGATCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPGMRAT*QVIRRP
Trigger: AGGCCTCCTGATCACTTGCCACGTGGCACGCATCCC...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQLSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQARSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAGGCAAAGCCAGGACCTaGACTTCCCACCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRGKART*TSHPKP
Trigger: GGGCTTGGGGTGGGAAGTTCAGGTCCTGGCTTTGCC...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGGGCAAAGCCAGGACCTaGACTTCCCACCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRGKART*TSHPKP
Trigger: GGGCTTGGGGTGGGAAGTTCAGGTCCTGGCTTTGCC...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCAGTCTCAGGTGGCCCTaGGCATGTGAGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPSLRWP*ACELLI
Trigger: GATGAGCAGCTCACATGCTCAGGGCCACCTGAGACT...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACAGTCTCAGGTGGCCCTaGGCATGTGAGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHSLRWP*ACELLI
Trigger: GATGAGCAGCTCACATGCTCAGGGCCACCTGAGACT...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCAGATCTCCACTGCCTaGGGGAGAGTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHQISTA*GRVISQ
Trigger: CTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCGCCCCACAGGCAGGTaGCGTATGACAGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPRPTGR*RMTARN
Trigger: GTTTCTGGCTGTCATACGTCACCTGCCTGTGGGGCG...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCTGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGWQRDA*HVASDQ
Trigger: CTGATCACTTGCCACGTGGCACGCATCCCTCTGCCA...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLFCTAR*RRWALW
Trigger: CCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSEPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGREPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACATGGGGCTCCCTGCTaGACGGCCTCAGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSHGAPC*TASGCS
Trigger: GGAGCATCCTGAGGCCGTGCAGCAGGGAGCCCCATG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCCCTCACCCCTGGTTATaGTCGGCCTCCCCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGPHPWL*SASPVH
Trigger: ATGCACAGGGGAGGCCGAGCATAACCAGGGGTGAGG...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGCCGGGCTCCCAGGGTaGCATACCTGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLAGLPG*HTCQPA
Trigger: GGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGC...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCGGGAGCTCACAGGATTaGCTGGGGAAGCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRELTGLPGEASAQNLALGSSQD*LGKPRP
Trigger: GGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCC...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACCAGGGACTGCTACCTaGCCAGAAGGCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSPGTAT*PEGGRE
Trigger: CTCCCTGCCGCCTTCTGGGCAGGTAGCAGTCCCTGG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCATTCACTGTCTGTCCTaGTGCTACCCCACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGIHCLS*CYPTWG
Trigger: CCCCCACGTGGGGTAGCAGCAGGACAGACAGTGAAT...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACGGGATGCGTGCCACGTaGCAAGTGATCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYGMRAT*QVIRRP
Trigger: AGGCCTCCTGATCACTTGCCACGTGGCACGCATCCC...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAACGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGTCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCAGCATTCCACGCAGGTaGGTTCATGTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASSIPRR*VHVPGA
Trigger: TGCCCCTGGGACATGAACCCACCTGCGTGGAATGCT...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCGCCGTAGGGGTGCCCTaGGTATATGCCGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVAVGVP*VYAGLP
Trigger: TGGGAGCCCGGCATATACCCAGGGCACCCCTACGGC...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTATGGGGCAAGGGAGCTaGACAGAAGACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAMGQGS*TEDPRG
Trigger: CCCTCTGGGGTCTTCTGTCCAGCTCCCTTGCCCCAT...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCAGGGGAGAGCAGTaGCAGTCTCAGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLARGEQ*QSQVAL
Trigger: CAGGGCCACCTGAGACTGTCACTGCTCTCCCCTGGC...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCAGAGGGGTGCCCCTaGAGGACTCTGGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLAEGCP*RTLGRQ
Trigger: TTGCCTGCCCAGAGTCCTTCAGGGGCACCCCTCTGC...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCACCGCCCACTGCCAGCTaGCAGATGTCCGCACCCGGG +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSPPTAS*QMSAPG
Trigger: CCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGG...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS-3UTR GCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTCGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPRALRH*CCSALR
Trigger: GCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACG...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCAAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPARRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAAATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEEISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGAGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGCCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAACCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCGGTGCAGGAGAAGCCTaGCCAGGGCCGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPGAGEA*PGPTPA
Trigger: GGCTGGGGTCGGCCCTGGGCAGGCTTCTCCTGCACC...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGGGGATGCGTGCCACGTaGCAAGTGATCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRGMRAT*QVIRRP
Trigger: AGGCCTCCTGATCACTTGCCACGTGGCACGCATCCC...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAGGGATGCGTGCCACGTaGCAAGTGATCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRGMRAT*QVIRRP
Trigger: AGGCCTCCTGATCACTTGCCACGTGGCACGCATCCC...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR CCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAACGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEERSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCAAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPARWALW*CSYRLR
Trigger: CCTCAACCTGTATGAGCACCACCACAGTGCCCACCT...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAACAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: PNPARTPWPHWNAQTAPSPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...GCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACGCTCACAGGATTGCCTaGGGAAGCCTCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYAHRIA*GSLGPK
Trigger: TTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGC...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCGCTCACAGGATTGCCTaGGGAAGCCTCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGAHRIA*GSLGPK
Trigger: TTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGC...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGATGGGGCAAGGGAGCTaGACAGAAGACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRMGQGS*TEDPRG
Trigger: CCCTCTGGGGTCTTCTGTCCAGCTCCCTTGCCCCAT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGTCAGTGACAGCACATaGGGCAAGGGAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGVSDST*GKGAGQ
Trigger: CTGTCCAGCTCCCTTGCCCCATGTGCTGTCACTGAC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGGPSRS*VASGRG
Trigger: ACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCC...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR TCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCGCACCACCTTTCTTGTaGAGAATGTTCCGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTAPPFL*RMFRAR
Trigger: ACGAGCCCGGAACATTCTTCACAAGAAAGGTGGTGC...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR TCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: RRELTGLPGEASAQNLALRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGAACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTCAGATCTCCACTGCCTaGGGGAGAGTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPQISTA*GRVISQ
Trigger: CTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTG...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGGCAATGACAGGATCTaGGGGTGTCCAGACGCAGAT +
Preference number: 4 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPGNDRI*GCPDAD
Trigger: ATCTGCGTCTGGACACCCTCAGATCCTGTCATTGCC...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCACCGTTTTGTACAGTCTaGCCATGGCTAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAPFCTV*PWLGVP
Trigger: TGGGACTCCTAGCCATGGTCAGACTGTACAAAACGG...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGTGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRWQRDA*HVASDQ
Trigger: CTGATCACTTGCCACGTGGCACGCATCCCTCTGCCA...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: RRELTGLPGEASAQNLALMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAATGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LGYSRMHTTCHCHRVALVFCTAR*RRWALW
Trigger: CCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA...CACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLNSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGACAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCATGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCTCACACAGGCACAGCTaGTCCTCTCCCAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGSHRHS*SSPKNS
Trigger: TGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGA...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTACATGGGGCTCCCTGCTaGACGGCCTCAGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLHGAPC*TASGCS
Trigger: GGAGCATCCTGAGGCCGTGCAGCAGGGAGCCCCATG...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGACAGACCCTGCATATaGAGGCGAGCTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQDRPCI*RRAHNP
Trigger: TGGGTTGTGAGCTCGCCTGCATATGCAGGGTCTGTC...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTTCCATGACAGACCCTaGATATGCAGGCGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGFHDRP*ICRRAH
Trigger: GTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAA...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTCGGCCTCCCCTGTaGATTTCTGTGTCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQARPPL*ISVSVS
Trigger: ACTTACGGACACAGAAATGCACAGGGGAGGCCGAGC...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCGCTCGGCCTCCCCTGTaGATTTCTGTGTCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGARPPL*ISVSVS
Trigger: ACTTACGGACACAGAAATGCACAGGGGAGGCCGAGC...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTGCTCGGCCTCCCCTGTaGATTTCTGTGTCCGTAAGT +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAARPPL*ISVSVS
Trigger: ACTTACGGACACAGAAATGCACAGGGGAGGCCGAGC...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTGGTGCCCTGGGTATATaGCGGGCTCCCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEAGALGI*RAPRVP
Trigger: TGGCACCCTGGGAGCCCGGCATATACCCAGGGCACC...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCCACTGTCTGTCCTGCTaGTACCCCACGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RRELTGLPGEASAQNLALHCLSC*YPTWGR
Trigger: TCTCCCCCACGTGGGGTAGCAGCAGGACAGACAGTG...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACACTGTCTGTCCTGCTaGTACCCCACGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSHCLSC*YPTWGR
Trigger: TCTCCCCCACGTGGGGTAGCAGCAGGACAGACAGTG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCATGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGT +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAWQEEK*ATIITR
Trigger: ACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCA...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGAGTGATCAGGAGGCCTaGCAGGAGGAAAAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSDQEA*QEEKWA
Trigger: GGCCCACTTTTCCTCCTGCCAGGCCTCCTGATCACT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGGAGCAACCCCCGCACTaGGCTATTCACGGATGCACA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTREQPPH*AIHGCT
Trigger: TGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTC...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGAGCATTCCACGCAGGTaGGTTCATGTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSIPRR*VHVPGA
Trigger: TGCCCCTGGGACATGAACCCACCTGCGTGGAATGCT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCATTTCCCTCAGGTAACTaGAGACGCACCCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAFPSGN*RRTLLL
Trigger: GAGTAGCAGGGTGCGTCTCCAGTTACCTGAGGGAAA...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CAA 72 bp CAGACTGGGTCAGAGGCTAGAAGGGAGCTCACAGGATaGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QTGSEARRELTG*PGEASAQNLAL
Trigger: GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTCTGACCCAGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTGCACCACCTTTCTTGTaGAGAATGTTCCGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAAPPFL*RMFRAR
Trigger: ACGAGCCCGGAACATTCTTCACAAGAAAGGTGGTGC...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR TCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGACGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCATGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCGGCAAAGCCAGGACCTaGACTTCCCACCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCGKART*TSHPKP
Trigger: GGGCTTGGGGTGGGAAGTTCAGGTCCTGGCTTTGCC...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGGCAATGACAGGATCTaGGGGTGTCCAGACGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQGNDRI*GCPDAD
Trigger: ATCTGCGTCTGGACACCCTCAGATCCTGTCATTGCC...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCCCGTTTTGTACAGTCTaGCCATGGCTAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGPFCTV*PWLGVP
Trigger: TGGGACTCCTAGCCATGGTCAGACTGTACAAAACGG...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACAGGCAGGTGACGTATaGCAGCCAGAAACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGQAGDV*QPETPN
Trigger: ATTTGGGGTTTCTGGCTGTCATACGTCACCTGCCTG...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCATGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSWQRDA*HVASDQ
Trigger: CTGATCACTTGCCACGTGGCACGCATCCCTCTGCCA...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAATGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSNSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRANSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCAAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGACCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGTGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTCCATTGTCACAGGGTTaGCCTCGTGTCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPPLSQG*PRVPQP
Trigger: GGGCTGAGGGACACGAGGGCAACCCTGTGACAATGG...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCTGGGCTATTCACGGATaGACACTACCTGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: EPKTGLWEGSPTRPGPLGWAIHG*TLPAIV
Trigger: GACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCA...GCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCTGGGCTATTCACGGATaGACACTACCTGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTWAIHG*TLPAIV
Trigger: GACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCA...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAAAGTAACTACAACTGCTaGCTGCCCCTCACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEESNYNC*LPLTPG
Trigger: ACCAGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACT...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAACCAGGGTGCCATACCTaGCAGCCAGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEPGCHT*QPAQGV
Trigger: CACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGG...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTGAGCATGTGAGCTaGTCATCCACATCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTPEHVS*SSTSGK
Trigger: TTTGCCTGATGTGGATGAGCAGCTCACATGCTCAGG...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTACAGCTGACCAAGCCCTaGAGGGCTCTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLQLTKP*RALSRQ
Trigger: CTGCCTGCTCAGAGCCCTGCAGGGCTTGGTCAGCTG...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTCGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGACGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGTCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRRWALW*CSYRLR
Trigger: CCTCAACCTGTATGAGCACCACCACAGTGCCCACCT...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCACTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGAGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCACTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRALSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGGGCCGTGCCCAGAGGTaGCAGAAGGCGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGGRAQR*QKALCL
Trigger: GAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCC...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGCCGTAGGGGTGCCCTaGGTATATGCCGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSAVGVP*VYAGLP
Trigger: TGGGAGCCCGGCATATACCCAGGGCACCCCTACGGC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCCCTAAACCAGGCTaGGCCTCCCACTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQFPKPG*ASHSPH
Trigger: GTGGGGCGAGTGGGAGGCCCAGCCTGGTTTAGGGAA...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CAA 72 bp CGCACTGGGCTATTCACGGATGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGTGTCCCTCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RTGLFTDAHYLP*SQGCPRVPQPS
Trigger: GCTGGGCTGAGGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQSAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGAAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCATGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTCTGCGTCCTGTGACTTaGAGGCCATGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPLRPVT*RPWNAQ
Trigger: CTGTGCGTTCCATGGCCTTCAAGTCACAGGACGCAG...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCCTAGCCTCACTACCTTaGGGCCGTGCCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPLASLP*GRAQRW
Trigger: CCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCTAG...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAGTCTCAGGTGGCCCTaGGCATGTGAGCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRSLRWP*ACELLI
Trigger: GATGAGCAGCTCACATGCTCAGGGCCACCTGAGACT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTCAGATCTCCACTGCCTaGGGGAGAGTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPQISTA*GRVISQ
Trigger: CTGGCTGATCACTCTCCCTCAGGCAGTGGAGATCTG...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGTCAGGGCAGACTCTGTaGTTCACTGTCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSGQTL*FTVCPA
Trigger: AGCAGGACAGACAGTGAATCACAGAGTCTGCCCTGA...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAATCGCTGCGTCCTGTaGCTTGAAGGCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: LRESDQPGGEARDCYLPRNRCVL*LEGHCE
Trigger: TTCACAGTGGCCTTCAAGTCACAGGACGCAGCGATT...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGC +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCALRHC*CSALRR
Trigger: GCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGC...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGC +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPALRHC*CSALRR
Trigger: GCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGC...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTACCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGCCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGTCACACAGGCACAGCTaGTCCTCTCCCAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRSHRHS*SSPKNS
Trigger: TGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGA...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGGTGCAGGAGAAGCCTaGCCAGGGCCGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQGAGEA*PGPTPA
Trigger: GGCTGGGGTCGGCCCTGGGCAGGCTTCTCCTGCACC...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGCGTAAGTGTCCCCTGTaGATTTCTGTGTCCACAAGA +
Preference number: 4 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGRKCPL*ISVSTR
Trigger: TCTTGTGGACACAGAAATGCACAGGGGACACTTACG...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGCCAGGGTGCCATACCTaGCAGCCAGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKPGCHT*QPAQGV
Trigger: CACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGG...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGCCGGGCTCCCAGGGTaGCATACCTGCCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDAGLPG*HTCQPA
Trigger: GGCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGC...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCAGGAGGTATAGGGTGTaGCCTGGGCAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCRRYRV*PGQGSR
Trigger: CCTGCTGCCTTGCCCAGGGCACACCCTATACCTCCT...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTCACTGTCTGTCCTGCTaGTACCCCACGTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEAHCLSC*YPTWGR
Trigger: TCTCCCCCACGTGGGGTAGCAGCAGGACAGACAGTG...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTAGCGGCCGAGGTCGGTaGCGGGCTCGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGSGRGR*RARSCR
Trigger: CCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCT...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTTGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGT +
Preference number: 4 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPWQEEK*ATIITR
Trigger: ACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCA...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSRWALW*CSYRLR
Trigger: CCTCAACCTGTATGAGCACCACCACAGTGCCCACCT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAAGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRELTGLPGEASAQNLALMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGATCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCAACCCGGCCAGGACCCCTTGGCCTCACTGGAACGCACAGACGGCACCCAGCACATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PTRPGPLGLTGTHRRHPAHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...TGCTGGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGACCCCTTGGCCTCACTaGAACGCACAGACGGCACCC +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMTPWPH*NAQTAP
Trigger: GGGTGCCGTCTGTGCGTTCCAGTGAGGCCAAGGGGT...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCCTCGGCCCAAAACCTaGCCCTCGCTCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTPRPKT*PSLQPR
Trigger: TCTGGGCTGGAGCGAGGGCCAGGTTTTGGGCCGAGG...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCTGCTGCTACCCCACGTaGGGGAGAACACGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPCCYPT*GRTRGL
Trigger: CAGCCCACGTGTTCTCCCCCACGTGGGGTAGCAGCA...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGTGCTGCTACCCCACGTaGGGGAGAACACGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKCCYPT*GRTRGL
Trigger: CAGCCCACGTGTTCTCCCCCACGTGGGGTAGCAGCA...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGT +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTGPSRS*VASGRG
Trigger: ACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCC...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR TCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSSAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCCTCAGGATGCTCCATaGGCAACCCCCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQPQDAP*ATPALG
Trigger: GCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAGG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGCCCAAGGAGAGTCAGTaGCAGCACATGGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LGYSRMHTTCHCHRVALVPKESQ*QHMGQG
Trigger: CCCTTGCCCCATGTGCTGTCACTGACTCTCCTTGGG...CACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCGCCCCACAGGCAGGTaGCGTATGACAGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKRPTGR*RMTARN
Trigger: GTTTCTGGCTGTCATACGTCACCTGCCTGTGGGGCG...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTAATCGCTGCGTCCTGTaGCTTGAAGGCCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCNRCVL*LEGHCG
Trigger: GCCGCAGTGGCCTTCAAGTCACAGGACGCAGCGATT...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419093.5
ENST00000627118.2
CDS-3UTR GCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPLRHCC*SALRRP
Trigger: TGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAG...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCCACCGTCAGGGAGCTaGACTGACCGCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQPPSGS*TDRRYR
Trigger: GCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRACSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFREPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVNSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCACGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAACTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAGGTGCAGGAGAAGCCTaGCCAGGGCCGACCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKGAGEA*PGPTPA
Trigger: GGCTGGGGTCGGCCCTGGGCAGGCTTCTCCTGCACC...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAACCATTGTCACAGGGTTaGCCTCGTGTCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEPLSQG*PRVPQP
Trigger: GGGCTGAGGGACACGAGGGCAACCCTGTGACAATGG...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCGGATGCACACTACCTaGCATTGTCACAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQRMHTT*HCHRVA
Trigger: GGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAATGCACGGCCTCAGGATaGTCCATGAGCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQCTASG*SMSNPR
Trigger: GCGGGGGTTGCTCATGGAGCATCCTGAGGCCGTGCA...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAAGGCCGTAAGTGTCCCCTGTaGATTTCTGTGTCCACAAGA +
Preference number: 4 (lower is better)
Translates to: GRVISQGERPGTATCPEGRKCPL*ISVSTR
Trigger: TCTTGTGGACACAGAAATGCACAGGGGACACTTACG...GCCTTCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCCTCACCCCTGGTTATaGTCGGCCTCCCCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKPHPWL*SASPVH
Trigger: ATGCACAGGGGAGGCCGAGCATAACCAGGGGTGAGG...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGAGTAACTACAACTGCTaGCTGCCCCTCACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQSNYNC*LPLTPG
Trigger: ACCAGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACT...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGGGTGCCATACCTaGCAGCCAGCCCAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLPGCHT*QPAQGV
Trigger: CACTCCCTGGGCTGGCTGGCAGGTATGGCACCCTGG...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGCAAGCCCTACATCCATaGAAGCCAGACCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: EARRELTGLPGEASAQNLQALHP*KPDQTG
Trigger: CCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTG...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGCAGCTGACCAAGCCCTaGAGGGCTCTGAGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGQLTKP*RALSRQ
Trigger: CTGCCTGCTCAGAGCCCTGCAGGGCTTGGTCAGCTG...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGTGCCATACCTGCCAGCCAGCCCCAGTTTTAAGATGTaGAGGGAAGTGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: RGALGICRAPRVPYLPASPSFKM*REVLTL
Trigger: CAGTGTCAACACTTCCCTGCACATCTTAAAACTGGG...GCTGGCTGGCAGGTATGGCACCCTGGGAGCCCGGCATATACCCAGGGCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAAAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEEKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCAGTGGCACCAGAGTGTaGAGGGGTGTGCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTSGTRV*RGVPVP
Trigger: GGGCACCGGCACACCCCTCCACACTCTGGTGCCACT...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAAAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEERSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAGCCTCAAGCAGAGCCTaGATGGCGAATGCGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRAASSRA*MANAVS
Trigger: GGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGC...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACCATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEAACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGCCCCTGAAGGACTCTaGGCAGGCAATGACAGGATC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPAPEGL*AGNDRI
Trigger: GATCCTGTCATTGCCTGCCCAGAGTCCTTCAGGGGC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCAGTCCCAAACACGGTaGACTTATCCTCAATGTGCC +
Preference number: 4 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQQSQTR*TYPQCA
Trigger: GGCACATTGAGGATAAGTCCACCGTGTTTGGGACTG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522411.5
CDS-3UTR TCA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCWGCAR*HGDTSP
Trigger: AGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCA...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTGGCAATGACAGGATCTaGGGGTGTCCAGACGCAGAT +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEAGNDRI*GCPDAD
Trigger: ATCTGCGTCTGGACACCCTCAGATCCTGTCATTGCC...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCCACCGTCAGGGAGCTaGACTGACCGCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSPPSGS*TDRRYR
Trigger: GCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTATGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPEPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAAACTCGGGCCTGTGGTaGCCGCCCGCCTCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVNSGLW*PPASSR
Trigger: TCTGCTTGAGGCGGGCGGGCACCACAGGCCCGAGTT...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTATCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCTCCCGGATCTCCGCTaGCCTGTGCTCCGGGAAACG +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGLPDLR*PVLRET
Trigger: CGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCCTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCTGGCAGAAGGCGCTGTaGCTCCTCAGGGGTCACGGC +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGWQKAL*LLRGHG
Trigger: GCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGCCA...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACCATTGTCACAGGGTTaGCCTCGTGTCCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQPLSQG*PRVPQP
Trigger: GGGCTGAGGGACACGAGGGCAACCCTGTGACAATGG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTCGGATGCACACTACCTaGCATTGTCACAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEARMHTT*HCHRVA
Trigger: GGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCG...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCACGGATGCACACTACCTaGCATTGTCACAGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPRMHTT*HCHRVA
Trigger: GGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCG...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAAGACAGACCCTGCATATaGAGGCGAGCTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQDRPCI*RRAHNP
Trigger: TGGGTTGTGAGCTCGCCTGCATATGCAGGGTCTGTC...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAAGTAACTACAACTGCTaGCTGCCCCTCACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPSNYNC*LPLTPG
Trigger: ACCAGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCGGCAGTAACTACAACTaGTGCCTGCCCCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPGSNYN*CLPLTP
Trigger: AGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACTGCC...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGGGGAGCTCACAGGATTaGCTGGGGAAGCCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGGSSQD*LGKPRP
Trigger: GGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCC...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAAGGAGGTATAGGGTGTaGCCTGGGCAAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQRRYRV*PGQGSR
Trigger: CCTGCTGCCTTGCCCAGGGCACACCCTATACCTCCT...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCCAGGGACTGCTACCTaGCCAGAAGGCGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGPGTAT*PEGGRE
Trigger: CTCCCTGCCGCCTTCTGGGCAGGTAGCAGTCCCTGG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAAGACGCAGATCTCCACTaGCTGAGGGAGAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQDADLH*LRESDQ
Trigger: CTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTC...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAACTGGAGACGCACCCTaGTACTCCTCACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLTGDAP*YSSRHS
Trigger: AGAGTGACGTGAGGAGTAGCAGGGTGCGTCTCCAGT...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGT +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRWQEEK*ATIITR
Trigger: ACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRAFSVSG*QRDACH
Trigger: GTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAA...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCTTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPFSVSG*QRDACH
Trigger: GTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAA...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACATCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCCTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCGAAAACTCGGGCCTGTaGTGCCCGCCCGCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGENSGL*CPPASS
Trigger: GCTTGAGGCGGGCGGGCACCACAGGCCCGAGTTTTC...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGCTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGLSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCTCTCAGGGTACAGCTaGGAGAAGCGGCCGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSLSGYS*EKRPRA
Trigger: GGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LGYSRMHTTCHCHRVALVACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...CACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCCTCGGCCCAAAACCTaGCCCTCGCTCCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSPRPKT*PSLQPR
Trigger: TCTGGGCTGGAGCGAGGGCCAGGTTTTGGGCCGAGG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCGCCCCTGAAGGACTCTaGGCAGGCAATGACAGGATC +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSAPEGL*AGNDRI
Trigger: GATCCTGTCATTGCCTGCCCAGAGTCCTTCAGGGGC...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAAGTCAGTGACAGCACATaGGGCAAGGGAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEVSDST*GKGAGQ
Trigger: CTGTCCAGCTCCCTTGCCCCATGTGCTGTCACTGAC...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAAGCACCACCTTTCTTGTaGAGAATGTTCCGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQAPPFL*RMFRAR
Trigger: ACGAGCCCGGAACATTCTTCACAAGAAAGGTGGTGC...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR TCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCACCAGGTGCCGTAGGTaGAGCAAACTCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTTRCRR*SKLPRS
Trigger: GCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGT...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGACCAGGTGCCGTAGGTaGAGCAAACTCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQTRCRR*SKLPRS
Trigger: GCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGT...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGCTGCGTCCTGTGACTTaGAGGCCATGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGLRPVT*RPWNAQ
Trigger: CTGTGCGTTCCATGGCCTTCAAGTCACAGGACGCAG...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAATCGCTGCGTCCTGTaGCTTGAAGGCCATGGAACG +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKNRCVL*LEGHGT
Trigger: CGTTCCATGGCCTTCAAGTCACAGGACGCAGCGATT...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCCTCAGGATGCTCCATaGGCAACCCCCGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLPQDAP*ATPALG
Trigger: GCCCAGTGCGGGGGTTGCTCATGGAGCATCCTGAGG...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCGTTTTGTACAGTCTaGCCATGGCTAGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCPFCTV*PWLGVP
Trigger: TGGGACTCCTAGCCATGGTCAGACTGTACAAAACGG...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGGAGGGGTGTGCCGGTaGCCAGTCAGGAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSGGVCR*PVRKQP
Trigger: TGGCTGTTTCCTGACTGGGCACCGGCACACCCCTCC...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAACGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCG +
Preference number: 4 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKRSSQL*GVYSSS
Trigger: CGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRAGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGACGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: RGCTGTAAISSWWCPLSRRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TTCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: FPPQALHPCKPDQTGSEAASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...AGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTAGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCCCCCCAGCCTCCGTCTaGCATCTGCCGGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPPPASV*HLPGQQ
Trigger: CTGCTGTCCCGGCAGATGGCAGACGGAGGCTGGGGG...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCCATGACAGACCCTaGATATGCAGGCGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQFHDRP*ICRRAH
Trigger: GTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAA...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCAAGCCCTACATCCATaGAAGCCAGACCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKQALHP*KPDQTG
Trigger: CCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTG...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAACAAGCCCTACATCCATaGAAGCCAGACCAGACTGGG +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEQALHP*KPDQTG
Trigger: CCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTG...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGCCTGAGCATGTGAGCTaGTCATCCACATCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQPEHVS*SSTSGK
Trigger: TTTGCCTGATGTGGATGAGCAGCTCACATGCTCAGG...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCACTGGAGACGCACCCTaGTACTCCTCACGTCACTCT +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSTGDAP*YSSRHS
Trigger: AGAGTGACGTGAGGAGTAGCAGGGTGCGTCTCCAGT...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGTTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKFSVSG*QRDACH
Trigger: GTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAA...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTTCCTGGCGGAGGCTCTaGACCAGCGGGTCTTCCGCG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSSWRRL*TSGSSA
Trigger: CGCGGAAGACCCGCTGGTCCAGAGCCTCCGCCAGGA...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATCTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GHGSCAPFLTQARQATFRSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGCCCAAGACAGGGTTATaGGAGGGCTCCCCAACCCGG +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGPKTGL*EGSPTR
Trigger: CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGGAGCAACCCCCGCACTaGGCTATTCACGGATGCACA +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKEQPPH*AIHGCT
Trigger: TGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTC...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCTTCCCTAAACCAGGCTaGGCCTCCCACTCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGFPKPG*ASHSPH
Trigger: GTGGGGCGAGTGGGAGGCCCAGCCTGGTTTAGGGAA...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCATTTCCCTCAGGTAACTaGAGACGCACCCTGCTACTC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPFPSGN*RRTLLL
Trigger: GAGTAGCAGGGTGCGTCTCCAGTTACCTGAGGGAAA...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRASAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACGCCTGCATCACGGCTaGGGTGCACTCCACATAGGT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVRLHHG*GALHIG
Trigger: ACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAACCAGGTGCCGTAGGTaGAGCAAACTCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVTRCRR*SKLPRS
Trigger: GCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGT...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTAATCGCTGCGTCCTGTaGCTTGAAGGCCATGGAACG +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPINRCVL*LEGHGT
Trigger: CGTTCCATGGCCTTCAAGTCACAGGACGCAGCGATT...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCCAGGGGAGAGCAGTaGCAGTCTCAGGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSARGEQ*QSQVAL
Trigger: CAGGGCCACCTGAGACTGTCACTGCTCTCCCCTGGC...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCAGCATGTGCAAACCTaGCAGATGTCAAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVQHVQT*QMSRVP
Trigger: TGGGACCCTTGACATCTGTCAGGTTTGCACATGCTG...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCTCAGGGCAGACTCTGTaGTTCACTGTCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPSGQTL*FTVCPA
Trigger: AGCAGGACAGACAGTGAATCACAGAGTCTGCCCTGA...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGLRHCC*SALRRP
Trigger: TGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTATGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLCSYSF*TARCRR
Trigger: CCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIEPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSGPGDL*TGSPIS
Trigger: CGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCC...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACCTCCGTCTGCCATCTaGCGGGACAGCAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVPPSAI*RDSRKS
Trigger: TGACTTCCTGCTGTCCCGGCAGATGGCAGACGGAGG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTCTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCTGCACCGGTACAGCTaGCATCTCCTCTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQLHRYS*HLLLVV
Trigger: CACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACATGCACGGCCTCAGGATaGTCCATGAGCAACCCCCGC +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTCTASG*SMSNPR
Trigger: GCGGGGGTTGCTCATGGAGCATCCTGAGGCCGTGCA...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTAGTGATCAGGAGGCCTaGCAGGAGGAAAAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRSDQEA*QEEKWA
Trigger: GGCCCACTTTTCCTCCTGCCAGGCCTCCTGATCACT...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKRWALW*CSYRLR
Trigger: CCTCAACCTGTATGAGCACCACCACAGTGCCCACCT...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGAAGACTGAAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: RRLKAGILTLKSCLCNNTAPGRQ*RRARPH
Trigger: ATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGC...GGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTTCAGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCTGGAGACATGCTCCTaGAAGGCAGTGGAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLLETCS*KAVEAG
Trigger: GCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAG...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCACCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: DRGCTGTAAISSWWCPLSPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...TGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTGAGCAACCCCCGCACTaGGCTATTCACGGATGCACA +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLREQPPH*AIHGCT
Trigger: TGTGCATCCGTGAATAGCCCAGTGCGGGGGTTGCTC...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGCCCCTGAAGGACTCTaGGCAGGCAATGACAGGATC +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGAPEGL*AGNDRI
Trigger: GATCCTGTCATTGCCTGCCCAGAGTCCTTCAGGGGC...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLRSPAY*RRSHPC
Trigger: GCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCG...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCCTAGCCTCACTACCTTaGGGCCGTGCCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPLASLP*GRAQRW
Trigger: CCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCTAG...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCCTGCCTGAGGGAGAGTaGTCAGCCAGGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRLPEGE*SARGRG
Trigger: GCCTCTCCCCCTGGCTGATCACTCTCCCTCAGGCAG...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGGTGCGGCACCTGGGTaGGAGCCCTGGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNGAAPG*EPWTAH
Trigger: GTGTGCAGTCCAGGGCTCTCACCCAGGTGCCGCACC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAACCCAAGGAGAGTCAGTaGCAGCACATGGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKPKESQ*QHMGQG
Trigger: CCCTTGCCCCATGTGCTGTCACTGACTCTCCTTGGG...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGCAGCATGTGCAAACCTaGCAGATGTCAAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGQHVQT*QMSRVP
Trigger: TGGGACCCTTGACATCTGTCAGGTTTGCACATGCTG...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGTCATTGCTGCTGCAGTaGTCTACGCCGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLSLLLQ*STPPTA
Trigger: GGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGA...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS-3UTR GCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCGGCGCCGCAGACACGTaGCCTCCGTCATTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRGAADT*PPSLLL
Trigger: CAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCC...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397728.8
CDS-3UTR GCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGTGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGWQRDA*HVASDQ
Trigger: CTGATCACTTGCCACGTGGCACGCATCCCTCTGCCA...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCCCACCGTCAGGGAGCTaGACTGACCGCAGGTACCGC +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRPPSGS*TDRRYR
Trigger: GCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGG...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR GCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVAPASQ*WRSPPH
Trigger: ATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGC...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTG +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQATLFL*ASQSML
Trigger: CAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGC...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNFCTAR*RRWALW
Trigger: CCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLREPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTACGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATC +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVQNSKP*VRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCT +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPEPSAL*CRRQNS
Trigger: AGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTC...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTCACACAGGCACAGCTaGTCCTCTCCCAAGAACTCA +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGSHRHS*SSPKNS
Trigger: TGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGA...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGGCAGTAACTACAACTaGTGCCTGCCCCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSGSNYN*CLPLTP
Trigger: AGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACTGCC...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCGGTGCCCTGGGTATATaGCGGGCTCCCAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRGALGI*RAPRVP
Trigger: TGGCACCCTGGGAGCCCGGCATATACCCAGGGCACC...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ATTTCTGTGTCCGTAAGTGTCCCCTGTGCATTTCTGTGTCCACAAGACTACTATAGCGGCCGAGGTCGGTaGCGGGCTCGGTCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: ISVSVSVPCAFLCPQDYYSGRGR*RARSCR
Trigger: CCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCT...ATAGTAGTCTTGTGGACACAGAAATGCACAGGGGACACTTACGGACACAGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR CCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTCCCTCAAAGGCGGTGTaGGCTTTGGGCAAGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRPSKAV*ALGKSL
Trigger: TAAGGACTTGCCCAAAGCCCACACCGCCTTTGAGGG...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTAGTGATCAGGAGGCCTaGCAGGAGGAAAAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSSDQEA*QEEKWA
Trigger: GGCCCACTTTTCCTCCTGCCAGGCCTCCTGATCACT...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTACAGTCCCAAACACGGTaGACTTATCCTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLQSQTR*TYPQCA
Trigger: TGCACATTGAGGATAAGTCCACCGTGTTTGGGACTG...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR CCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLRSSSS*AGTPAG
Trigger: GCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACG...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCACATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGCCCAGCATGTGTTATaGATCTGGGACTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQAQHVL*IWDWAL
Trigger: GAGTGCCCAGTCCCAGATCCATAACACATGCTGGGC...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGCATGTTCTCAGGGGTaGCCAGCAAGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSACSQG*PARALS
Trigger: TGAGAGAGCCCTTGCTGGCCACCCCTGAGAACATGC...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCCCGGCCAGGACCCCTTaGCCTCACTGGAACGCACAG +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRPARTP*PHWNAQ
Trigger: CTGTGCGTTCCAGTGAGGCCAAGGGGTCCTGGCCGG...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTAAGCATTCCACGCAGGTaGGTTCATGTCCCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLSIPRR*VHVPGA
Trigger: TGCCCCTGGGACATGAACCCACCTGCGTGGAATGCT...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGATGGGGCAAGGGAGCTaGACAGAAGACCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLMGQGS*TEDPRG
Trigger: CCCTCTGGGGTCTTCTGTCCAGCTCCCTTGCCCCAT...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGGTCAGTGACAGCACATaGGGCAAGGGAGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGVSDST*GKGAGQ
Trigger: CTGTCCAGCTCCCTTGCCCCATGTGCTGTCACTGAC...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
3UTR CAA 72 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCP*SRACQGDESSG
Trigger: CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDESAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQSAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTACCAGGTGCCGTAGGTaGAGCAAACTCCCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSTRCRR*SKLPRS
Trigger: GCTCCTGGGGAGTTTGCTTCACCTACGGCACCTGGT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCCTAGCCTCACTACCTTaGGGCCGTGCCCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRLASLP*GRAQRW
Trigger: CCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCTAG...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTACTTGGGATGTTCCATaGCAGACCCTGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTTWDVP*QTLHMQ
Trigger: CTGCATATGCAGGGTCTGTCATGGAACATCCCAAGT...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTAATCGCTGCGTCCTGTaGCTTGAAGGCCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSNRCVL*LEGHCG
Trigger: GCCGCAGTGGCCTTCAAGTCACAGGACGCAGCGATT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419093.5
ENST00000627118.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPLRHCC*SALRRP
Trigger: TGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAG...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTCGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGC +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSRALRH*CCSALR
Trigger: GCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACG...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGGCGCCGCAGACACGTaGCCTCCGTCATTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNGAADT*PPSLLL
Trigger: CAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGWALWW*SYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCA...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGGGATTCTGGAGACATaGTCCTGGAAGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDGILET*SWKAVE
Trigger: CTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCC...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGC +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDSRPQP*SQKRSS
Trigger: GCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGA...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTAGCAGCTCCAGCAAGTaGCCCCCACGCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSSSSSK*PPRLVS
Trigger: TGAGACCAAGCGTGGGGGGCACTTGCTGGAGCTGCT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGAAATACTTAAGCGCCTaGATCACGGCTGAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKKYLSA*ITAEVH
Trigger: GTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTT...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTACTACCTTGAGGCCGTaGCCAGAGGTGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSTTLRP*PEVAEG
Trigger: GCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTAGACAGACCCTGCATATaGAGGCGAGCTCACAACCCA +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLDRPCI*RRAHNP
Trigger: TGGGTTGTGAGCTCGCCTGCATATGCAGGGTCTGTC...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGTTCCATGACAGACCCTaGATATGCAGGCGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQFHDRP*ICRRAH
Trigger: GTGAGCTCGCCTGCATATGCAGGGTCTGTCATGGAA...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAATTCACTGTCTGTCCTaGTGCTACCCCACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKIHCLS*CYPTWG
Trigger: CCCCCACGTGGGGTAGCAGCAGGACAGACAGTGAAT...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGCAGAAACCCCAAATCTaGAGTTCTCCCCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLQKPQI*SSPQDE
Trigger: TTCATCCTGGGGAGAACTGCAGATTTGGGGTTTCTG...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAAGTGATCAGGAGGCCTaGCAGGAGGAAAAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKSDQEA*QEEKWA
Trigger: GGCCCACTTTTCCTCCTGCCAGGCCTCCTGATCACT...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000457828.6
CDS-3UTR CCA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGCAGTCCCAAACACGGTaGACTTATCCTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKQSQTR*TYPQCA
Trigger: TGCACATTGAGGATAAGTCCACCGTGTTTGGGACTG...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGRWALW*CSYRLR
Trigger: CCTCAACCTGTATGAGCACCACCACAGTGCCCACCT...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACACAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTQAEPG*RMRCPR
Trigger: TCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTG...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCACATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRAHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ATTTCTGTGTCCGTAAGTGTCCCCTGTGCATTTCTGTGTCCACAAGACTACTATGCCGTAGGGGTGCCCTaGGTATATGCCGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISVSVSVPCAFLCPQDYYAVGVP*VYAGLP
Trigger: TGGGAGCCCGGCATATACCCAGGGCACCCCTACGGC...ATAGTAGTCTTGTGGACACAGAAATGCACAGGGGACACTTACGGACACAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGCTCACAGGATTGCCTaGGGAAGCCTCGGCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTAHRIA*GSLGPK
Trigger: TTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGC...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp CTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTAAAGTTCCTCCTATGTaGACATTGTATCACGTTTAT +
Preference number: 4 (lower is better)
Translates to: LLRGHGSCAPFLTQARQAKVPPM*TLYHVY
Trigger: ATAAACGTGATACAATGTCCACATAGGAGGAACTTT...AGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGCACCACCTTTCTTGTaGAGAATGTTCCGGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDAPPFL*RMFRAR
Trigger: ACGAGCCCGGAACATTCTTCACAAGAAAGGTGGTGC...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR TCA 90 bp TCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGCTACTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: STLRNHTGTAAPLPRTQLLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...TAGCTGAGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPSLRNS*AFCRQD
Trigger: GTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCT...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACACTCTAAGCCCTGCGTaGGGGTCTCCCGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNTLSPA*GSPGSP
Trigger: CGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGT...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATTGCCCTGCATTTTCATaGCGTCAAGGCCCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TAAISSWWCPLSRACQGDCPAFS*RQGPSR
Trigger: TCTGGATGGGCCTTGACGGCATGAAAATGCAGGGCA...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAGGAGAAGCCACCCTTaGGCATCTGGCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKRRSHP*ASGGST
Trigger: AGTACTACCGCCAGATGCGCAAGGGTGGCTTCTCCT...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAACTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLELTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCACTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: GCTGTAAISSWWCPLSRALTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCCTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCGGCAGTAACTACAACTaGTGCCTGCCCCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPGSNYN*CLPLTP
Trigger: AGGGGTGAGGGGCAGGCAGCAGTTGTAGTTACTGCC...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCCTGAGCATGTGAGCTaGTCATCCACATCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQPEHVS*SSTSGK
Trigger: TTTGCCTGATGTGGATGAGCAGCTCACATGCTCAGG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCCAGTTTTAAGATGTaGAGGGAAGTGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCPSFKM*REVLTL
Trigger: CAGTGTCAACACTTCCCTGCACATCTTAAAACTGGG...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCCCCAGTTTTAAGATGTaGAGGGAAGTGTTGACACTG +
Preference number: 4 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPPSFKM*REVLTL
Trigger: CAGTGTCAACACTTCCCTGCACATCTTAAAACTGGG...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCATTCACTGTCTGTCCTaGTGCTACCCCACGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPIHCLS*CYPTWG
Trigger: CCCCCACGTGGGGTAGCAGCAGGACAGACAGTGAAT...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCAGAAACCCCAAATCTaGAGTTCTCCCCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIQKPQI*SSPQDE
Trigger: TTCATCCTGGGGAGAACTGCAGATTTGGGGTTTCTG...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp AGAAGACTGAAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCTTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RRLKAGILTLKSCLCNNTFSVSG*QRDACH
Trigger: GTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAA...GGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTTCAGTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTACCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGDSPGF*RHAPGR
Trigger: CCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATC...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLMCSVT*GHFSCR
Trigger: CCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACAT...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTAGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: APFLTQARQATFRNEPTVAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGACATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RGCTGTAAISSWWCPLSRHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGCCATCAGCCCCATCATaGCCCAGCATGTGTTATGGA +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGPSAPS*PSMCYG
Trigger: TCCATAACACATGCTGGGCCATGATGGGGCTGATGG...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTA +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLAASRH*GAVSQV
Trigger: TACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGC...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCGGTGCTCATACAGGTTaGGGAGCGCATATACCACGC +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPGAHTG*GAHIPR
Trigger: GCGTGGTATATGCGCTCCTCAACCTGTATGAGCACC...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTACTTGGGATGTTCCATaGCAGACCCTGCATATGCAG +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSTWDVP*QTLHMQ
Trigger: CTGCATATGCAGGGTCTGTCATGGAACATCCCAAGT...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAACAGCATGTGCAAACCTaGCAGATGTCAAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKQHVQT*QMSRVP
Trigger: TGGGACCCTTGACATCTGTCAGGTTTGCACATGCTG...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAATCAGGGCAGACTCTGTaGTTCACTGTCTGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKSGQTL*FTVCPA
Trigger: AGCAGGACAGACAGTGAATCACAGAGTCTGCCCTGA...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGAAACGAAACACAGTGTaGCAGGCTTCTGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKKRNTV*QASDKG
Trigger: TCCCTTATCAGAAGCCTGTCACACTGTGTTTCGTTT...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAACAGGCAGGTGACGTATaGCAGCCAGAAACCCCAAAT +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKQAGDV*QPETPN
Trigger: ATTTGGGGTTTCTGGCTGTCATACGTCACCTGCCTG...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACATGGGCAGGTACACCTaGCGGCAGTGGCACCAGAGT +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNMGRYT*RQWHQS
Trigger: ACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCAT...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp ATTTCTGTGTCCGTAAGTGTCCCCTGTGCATTTCTGTGTCCACAAGACTACTATATCTCCGCTGCCCTGTaGTCCGGGAAACGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: ISVSVSVPCAFLCPQDYYISAAL*SGKRLW
Trigger: CCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGAT...ATAGTAGTCTTGTGGACACAGAAATGCACAGGGGACACTTACGGACACAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR GCA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCGACGCAGATCTCCACTaGCTGAGGGAGAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPDADLH*LRESDQ
Trigger: CTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTC...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGCAGTCCCAAACACGGTaGACTTATCCTCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEQSQTR*TYPQCA
Trigger: TGCACATTGAGGATAAGTCCACCGTGTTTGGGACTG...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVARCRR*ALWWCS
Trigger: TGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGC...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGCTTGGTCTCATAGGTaGCGAACCCTCCATCTGGAT +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLAWSHR*RTLHLD
Trigger: ATCCAGATGGAGGGTTCGCCACCTATGAGACCAAGC...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGSGKRL*KYLSAC
Trigger: GCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGA...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSWWCPLSRACQGDESSGAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...CCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSLGTGY*GLPSCK
Trigger: TTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAG...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGTTATCTGGGACCTGTaGGAGCCTCAGGAACTCATG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSVIWDL*EPQELM
Trigger: CATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAAC...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTAGGTGTAGTCAATCATaGTGTCCCCGAAGACCTCCG +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSRCSQS*CPRRPP
Trigger: CGGAGGTCTTCGGGGACATCATGATTGACTACACCT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: QTEAAPVQLPSPLGGVLCDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...ACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCCTCTACGCCGCCCACTaGCAGCTGCCAGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVLYAAH*QLPDVR
Trigger: GCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAG...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACAC +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNRSLGM*SVTWGH
Trigger: GTGTCCCCATGTCACCGAGCACATCCCCAGAGAACG...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAATGGGCTATTCACGGATaGACACTACCTGCCATTGTC +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKWAIHG*TLPAIV
Trigger: GACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCA...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGA +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSPASQC*RSPPHR
Trigger: TCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGG...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGCTGCCATCTCCTCTTaGTGGTGTCCTTTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SWWCPLSRACQGDESSGTAAISS*WCPLSR
Trigger: TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTTGCTGCTACCCCACGTaGGGGAGAACACGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSICCYPT*GRTRGL
Trigger: CAGCCCACGTGTTCTCCCCCACGTGGGGTAGCAGCA...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCCAAGGAGAGTCAGTaGCAGCACATGGGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIPKESQ*QHMGQG
Trigger: CCCTTGCCCCATGTGCTGTCACTGACTCTCCTTGGG...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTAAACGAAACACAGTGTaGCAGGCTTCTGATAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSKRNTV*QASDKG
Trigger: TCCCTTATCAGAAGCCTGTCACACTGTGTTTCGTTT...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGAGCCGTTGGTGCCCTaGATTTTCATGCCGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNEPLVP*IFMPSR
Trigger: CCTTGACGGCATGAAAATGCAGGGCACCAACGGCTC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGCTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCTGACACTGAAGTCCTaGCTGTGTAATAACACCGAA +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGLTLKS*LCNNTE
Trigger: TTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCTACACCTGCCGGCAGTaGCACCAGAGTGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVYTCRQ*HQSVEG
Trigger: CCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTA...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CCA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGCTCTTTACTCATTTCTaGTACCGTTCCTTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDELFTHF*YRSLSY
Trigger: GTAGGACAAGGAACGGTACCAGAAATGAGTAAAGAG...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTCTCTTTACTCATTTCTaGTACCGTTCCTTGTCCTAC +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRLFTHF*YRSLSY
Trigger: GTAGGACAAGGAACGGTACCAGAAATGAGTAAAGAG...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCGTCAGGGAGCTGCACTaGCCGCAGGTACCGCACAAT +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVVRELH*PQVPHN
Trigger: ATTGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGAC...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS-3UTR TCA 90 bp ATTTCTGTGTCCGTAAGTGTCCCCTGTGCATTTCTGTGTCCACAAGACTACTATAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: ISVSVSVPCAFLCPQDYYSAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...ATAGTAGTCTTGTGGACACAGAAATGCACAGGGGACACTTACGGACACAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVGVPDL*AVGALH
Trigger: ATGCAGGGCACCAACGGCTCACAGATCTGGGACACC...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR TCA 90 bp CGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RYSCHLLLVVSFVKSMSGIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...CCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: GTAAISSWWCPLSRACQGDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACAATCGCTGCGTCCTGTaGCTTGAAGGCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNNRCVL*LEGHCE
Trigger: TTCACAGTGGCCTTCAAGTCACAGGACGCAGCGATT...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR GCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGCATCACGGCTGAGGTaGACTCCACATAGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNASRLR*TPHRCS
Trigger: ACTACACCTATGTGGAGTGCACCTCAGCCGTGATGC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAG +
Preference number: 4 (lower is better)
Translates to: LVPFLVLPSMLILKISRVPSALC*RRQNSK
Trigger: CTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGG...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR GCA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCCGTAAGTGTCCCCTGTaGATTTCTGTGTCCACAAGA +
Preference number: 4 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPRKCPL*ISVSTR
Trigger: TCTTGTGGACACAGAAATGCACAGGGGACACTTACG...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACTGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGT +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNWQEEK*ATIITR
Trigger: ACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCA...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CCA 90 bp TGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCCACGCAAACAGCCACATCTCTaGGAACAGGGTATTGAGGCC +
Preference number: 4 (lower is better)
Translates to: CPQDYYKPCRHLTNSIPRKQPHL*EQGIEA
Trigger: GGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTT...GCGTGGAATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTCATGTGTTATGGATCTaGGACTGGGCACTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ISSWWCPLSRACQGDESSHVLWI*DWALCK
Trigger: TTTGCAGAGTGCCCAGTCCCAGATCCATAACACATG...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTAGAAAAAGTTCCTCCTATGTaGACATTGTATCACGTTTAT +
Preference number: 4 (lower is better)
Translates to: HPKPYIHASQTRLGQRLEKVPPM*TLYHVY
Trigger: ATAAACGTGATACAATGTCCACATAGGAGGAACTTT...TTCTAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR TCA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: AAISSWWCPLSRACQGDEIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGACTCCTCTGCATTGTaGTCCAATTGTGAACAAAAA +
Preference number: 4 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQDSSAL*SNCEQK
Trigger: TTTTTGTTCACAATTGGATCACAATGCAGAGGAGTC...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR GCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTGACGCAGATCTCCACTaGCTGAGGGAGAGTGATCAG +
Preference number: 4 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIDADLH*LRESDQ
Trigger: CTGATCACTCTCCCTCAGGCAGTGGAGATCTGCGTC...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACAGATCTGTGAGCCGTTaGTGCCCTGCATTTTCATGC +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNRSVSR*CPAFSC
Trigger: GCATGAAAATGCAGGGCACCAACGGCTCACAGATCT...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: TGTAAISSWWCPLSRACQTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp GTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: VLCQEHVRVMSHLGQVTLTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...GAGGGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGCCATCTCCTCTTGGTaGTGTCCTTTGTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNAISSW*CPLSRA
Trigger: TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTAGCGCACAAGCATGTTaGTGGTTTTCGAGATCGGGC +
Preference number: 4 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSISAQAC*WFSRSG
Trigger: GCCCGATCTCGAAAACCATCAACATGCTTGTGCGCT...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR TCA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTTGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTT +
Preference number: 4 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIWHRTC*RPQQCF
Trigger: AAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCA...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR TCA 90 bp AGAAGACTGAAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCATTGTGATCCAATTGTaGACAAAAAGTCCTCTTCGT +
Preference number: 4 (lower is better)
Translates to: RRLKAGILTLKSCLCNNTIVIQL*TKSPLR
Trigger: ACGAAGAGGACTTTTTGTTCACAATTGGATCACAAT...GGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTTCAGTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CCA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACACTCCCTCTAAACAATaGATTGAACACAGATGTGAT +
Preference number: 4 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNTPSKQ*IEHRCD
Trigger: ATCACATCTGTGTTCAATCCATTGTTTAGAGGGAGT...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
3UTR CAA 72 bp GGGTTGTTATGTCTTGATAAATCGATCTTATCATTATaGTCTCTTTACTCATTTCTGGTACCGTTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: GLLCLDKSILSL*SLYSFLVPFLV
Trigger: GACAAGGAACGGTACCAGAAATGAGTAAAGAGACAATAATGATAAGATCGATTTATCAAGACATAACAACCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS GCA 90 bp CACGTGCCCTCCGTCATTGCTGCTGCAGTGCTCTACGCCGCCCACTaGCAGCTGCCAGATGTCCGCACCCGGGACCTGCCGCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HVPSVIAAAVLYAAH*QLPDVRTRDLPPSP
Trigger: GGGGCTGGGCGGCAGGTCCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000457828.6
CDS GCA 90 bp CCCCTCGGCGCCGCAGACACGTGCCCTCCGTCATTGCTGCTGCAGTaGTCTACGCCGCCCACTGCCAGCTGCCAGATGTCCGCACCCGGG +
Preference number: 5 (lower is better)
Translates to: PLGAADTCPPSLLLQ*STPPTASCQMSAPG
Trigger: CCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCCGAGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS GCA 90 bp CCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTGCTGCTGCAGTaGTCTACGCCGCCCACTGCCAGCTGCCAGATGTCCGCACCCGGG +
Preference number: 5 (lower is better)
Translates to: PGARGLTCPPSLLLQ*STPPTASCQMSAPG
Trigger: CCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS TCA 90 bp GCTCGTCCTGCAGGTAGGTCCACGTCTGCCGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGTCGGTGGCGGGCTCGGTCTTGTAGG +
Preference number: 5 (lower is better)
Translates to: ARPAGRSTSAGPSRS*VASGRGRWRARSCR
Trigger: CCTACAAGACCGAGCCCGCCACCGACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCCGGCAGACGTGGACCTACCTGCAGGACGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000472272.1
ENST00000522411.5
CDS GCA 90 bp AGGAGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGATGTCCGCAC +
Preference number: 5 (lower is better)
Translates to: RSPGRGDSRALRHCC*SALRRPLPAARCPH
Trigger: GTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS GCA 90 bp GTCAGGAGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGATGTCCG +
Preference number: 5 (lower is better)
Translates to: VRSPGRGDSRALRHC*CSALRRPLPAARCP
Trigger: CGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTCCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS-3UTR CAA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS GCA 90 bp TTCGTCAGGAGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGATGT +
Preference number: 5 (lower is better)
Translates to: FVRSPGRGDSRALRH*CCSALRRPLPAARC
Trigger: ACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTCCTGACGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS CCA 90 bp GCGGGTCTTCCGCGGCACTCAGCCGAACGGCGTAGCAGTAGCTCATaGGCAGGTACACCTGCCGGCAGTGGCACCAGAGTGTGGAGGGGT +
Preference number: 5 (lower is better)
Translates to: AGLPRHSAERRSSSS*AGTPAGSGTRVWRG
Trigger: ACCCCTCCACACTCTGGTGCCACTGCCGGCAGGTGTACCTGCCCATGAGCTACTGCTACGCCGTTCGGCTGAGTGCCGCGGAAGACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000625922.1
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAAGGGAGCTCACAGGATaGCCTGGGGAAGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQRELTG*PGEASA
Trigger: GGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCT...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS GCA 90 bp GTGAAGCAAACTCCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCTAAGCCCTGCGTGAGGGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: VKQTPQEPSQEPSAL*CRRQNSKPCVRVSR
Trigger: CCGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGTTTGCTTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RRELTGLPGEASAQNLALSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS GCA 90 bp AAGCAAACTCCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAGCCCTGCGTGAGGGTCTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: KQTPQEPSQEPSALC*RRQNSKPCVRVSRI
Trigger: GATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGTTTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp GTGAAGCAAACTCCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCTAAGCCCTGCGTGAGGGTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: VKQTPQEPSQEPSAL*CRRQNSKPCVRVSL
Trigger: CAGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGTTTGCTTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484808.1
ENST00000625491.1
CDS CCA 90 bp GCTCGTCGGGGGCCACGTTGTTCCTCTGCGCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGAGCTCCTGGCGGAGGCTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: ARRGPRCSSAPASQC*RSPPHRAPGGGSGP
Trigger: TGGTCCAGAGCCTCCGCCAGGAGCTCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGATCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GHGSCAPFLTQARQATFRSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCAGGGAGCTCACAGGATaGCCTGGGGAAGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: RRELTGLPGEASAQNLALRELTG*PGEASA
Trigger: GGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCT...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS GCA 90 bp ACAGCTCGTCGGGGGCCACGTTGTTCCTCTGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACATAGAGCTCCTGGCGGAGGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: TARRGPRCSSAPASQ*WRSPPHRAPGGGSG
Trigger: TCCAGAGCCTCCGCCAGGAGCTCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp TCATACAGGTTGAGGAGCGCATATACCACGCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCGGGGGCCACGTTGTTCCTCTGCGCC +
Preference number: 5 (lower is better)
Translates to: SYRLRSAYTTRSSQL*GVYSSSGATLFLCA
Trigger: GGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCGCGTGGTATATGCGCTCCTCAACCTGTATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp TACAGCTTCTGCACGGCCCGCTGCCGCAGGTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGCGCATATACCACGCGGAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: YSFCTARCRRWALWW*SYRLRSAYTTRSSQ
Trigger: CTGGCTGCTCCGCGTGGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp GTGAGAATGGATGGGTCTAAACTGACGCCCACAGGCCCCGCCAGGTaGAGCCAGCGCCTCGGGCTCTTGCCACACCTTCTTCCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: VRMDGSKLTPTGPAR*SQRLGLLPHLLPRL
Trigger: GAGCCTAGGAAGAAGGTGTGGCAAGAGCCCGAGGCGCTGGCTGCACCTGGCGGGGCCTGTGGGCGTCAGTTTAGACCCATCCATTCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS GCA 90 bp AAGCAAACTCCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAGCCCTGCGTGAGGGTCTCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: KQTPQEPSQEPSALC*RRQNSKPCVRVSLE
Trigger: TTCCAGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGTTTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484808.1
ENST00000625491.1
CDS-3UTR CAA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAACGGCCCCTCTCGCAGTaGAGTCGCCAGCGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQRPLSQ*SRQRPR
Trigger: CCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCCG...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CAA 90 bp TCCCACCCCAAGCCCTACATCCATGCAAGCCAGACCAGACTGGGTCAGAGGCTATCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SHPKPYIHASQTRLGQRLSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...TAGCCTCTGACCCAGTCTGGTCTGGCTTGCATGGATGTAGGGCTTGGGGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp TGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAATGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: CLLRGHGSCAPFLTQARQCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...TTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYAHYLP*SQGCPR
Trigger: ACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGC...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS GCA 90 bp CGGTCGTCGGCCACAATGTGTTCATACAGCTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGGTGGTGCTCATACAGGTTGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RSSATMCSYSFCTAR*RRWALWWCSYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACACATTGTGGCCGACGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp TCATACAGCTTCTGCACGGCCCGCTGCCGCAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGGAGCGCATATACCACGCGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SYSFCTARCRRWALW*CSYRLRSAYTTRSS
Trigger: GCTGCTCCGCGTGGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: GVGAQDRVMGGLPNPARTQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...GGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ATGAGACTGGCGGCAGCCGTAGGGGTGCCCTGGGTATATGCCGGGCTCCCAGGGCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: MRLAAAVGVPWVYAGLPGQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...CCCTGGGAGCCCGGCATATACCCAGGGCACCCCTACGGCTGCCGCCAGTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GCAGAAGGCGCTGTGCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: AEGAVPPQGSRLLCPLPHQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...GTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGCACAGCGCCTTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGCCTCTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: PKTGLWEGSPTRPGPLGLCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...GAGGCCAAGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCGAGATGGCACAGGACTaGTTGAAGACCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: GLEPKTGLWEGSPTRPGPEMAQD*LKTPAM
Trigger: CATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTC...GGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GTCAGGGTGATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGAGCCATTGTCACAGGGTaGCCCTCGTGTCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: VRVMSHLGQVTLPAPRSRAIVTG*PSCPSA
Trigger: GGCTGAGGGACACGAGGGCAACCCTGTGACAATGGC...TCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCATCACCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGAGGGAGAGTGATCAGCCAGGGGGAGAGGCCAGGGACTGCTACCTGCCCAGAGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: LRESDQPGGEARDCYLPRAHYLP*SQGCPR
Trigger: ACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGC...TCTGGGCAGGTAGCAGTCCCTGGCCTCTCCCCCTGGCTGATCACTCTCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp CCCCGCACTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCAGGGAGCTCACAGGATaGCCTGGGGAAGCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PRTGLFTDAHYLPLSQGCRELTG*PGEASA
Trigger: GGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCT...GCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAGTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS TCA 90 bp GCACAGCCACAGCATCGCAGAGCCGTTCTCTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCTGCAGGAGCAGCACAGCCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: AQPQHRRAVLWGCAR*HGDTSPAGAAQPSR
Trigger: CCTTGAAGGCTGTGCTGCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTGTGGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp TTCAGCAGCACAGCCACAGCATCGCAGAGCCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACACTTCTCCTGCAGGAGCAGCACAGCC +
Preference number: 5 (lower is better)
Translates to: FSSTATASQSRSLGM*SVTWGHFSCRSSTA
Trigger: GGCTGTGCTGCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTGTGGCTGTGCTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp TGTTCATACAGCTTCTGCACGGCCCGCTGCCGCAGGTGGGCACTGTaGTGGTGCTCATACAGGTTGAGGAGCGCATATACCACGCGGAGC +
Preference number: 5 (lower is better)
Translates to: CSYSFCTARCRRWAL*WCSYRLRSAYTTRS
Trigger: GCTCCGCGTGGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp GCCACAGCATCGCAGAGCCGTTCTCTGGGGATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGGAGCAGCACAGCCTTCAAGGCCTCA +
Preference number: 5 (lower is better)
Translates to: ATASQSRSLGMCSVT*GHFSCRSSTAFKAS
Trigger: TGAGGCCTTGAAGGCTGTGCTGCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp GGGCTCTCTCAGGGTACAGCTGGGAGAAGCGGCCGAGGGCCCAGATaGGGAAGATGTTCCTGTAGCTCGTGTAGGAGATGGCACAGGACT +
Preference number: 5 (lower is better)
Translates to: GLSQGTAGRSGRGPR*GRCSCSSCRRWHRT
Trigger: AGTCCTGTGCCATCTCCTACACGAGCTACAGGAACATCTTCCCCATCTGGGCCCTCGGCCGCTTCTCCCAGCTGTACCCTGAGAGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000474319.1
ENST00000491729.1
ENST00000522411.5
ENST00000625576.2
ENST00000626535.1
ENST00000630343.2
ENST00000630702.1
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAACGTGCCCTCCGTCATaGCTGCTGCAGTGCTCTACG +
Preference number: 5 (lower is better)
Translates to: GHGSCAPFLTQARQATFRTCPPS*LLQCST
Trigger: CGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
CDS-3UTR CAA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGCGGCCCCTCTCGCAGTaGAGTCGCCAGCGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQRPLSQ*SRQRPR
Trigger: CCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCCG...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CAA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGATGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: EGLEPKTGLWEGSPTRPGWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...TCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: VGAQDRVMGGLPNPARTPIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...AGGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAGCCATTGTCACAGGGTaGCCCTCGTGTCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPAIVTG*PSCPSA
Trigger: GGCTGAGGGACACGAGGGCAACCCTGTGACAATGGC...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGAACCCTGCTGCACAGACTaGGGATGTTCCATGACAGAC +
Preference number: 5 (lower is better)
Translates to: ESSGTGHPPSTEKPTGEEPCCTD*GCSMTD
Trigger: GTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGG...TTCCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS TCA 90 bp CTTATCCTCAATGTGCAGGCCCCAGCCACCGTCAGGGAGCTGCACTaGCCGCAGGTACCGCACAATCTCTTCTCTGTATCCGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LILNVQAPATVRELH*PQVPHNLFSVSGWQ
Trigger: CTGCCAGCCGGATACAGAGAAGAGATTGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGGCTGGGGCCTGCACATTGAGGATAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
CDS GCA 90 bp CTCTTGGTGAATCGGTCGTCGGCCACAATGTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGGTGGGCACTGTGGTGGTGCTCATAC +
Preference number: 5 (lower is better)
Translates to: LLVNRSSATMCSYSF*TARCRRWALWWCSY
Trigger: GTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACACATTGTGGCCGACGACCGATTCACCAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 90 bp CAGGAGCCATCGGCCCTCTGCTGCCGCCGACAGAACTCTAAGCCCTaGGTGAGGGTCTCCCTGGAACACGAGATTGGTCCAGTGAACATT +
Preference number: 5 (lower is better)
Translates to: QEPSALCCRRQNSKP*VRVSLEHEIGPVNI
Trigger: AATGTTCACTGGACCAATCTCGTGTTCCAGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484808.1
ENST00000625491.1
CDS CCA 90 bp AGGGTCTCCCGGATCTCCGCTGCCCTGTGCTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGCATCACGGCTGAGGTGCACTCCACA +
Preference number: 5 (lower is better)
Translates to: RVSRISAALCSGKRL*KYLSACITAEVHST
Trigger: TGTGGAGTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp ACCATCAGGCTGGGGCAGCATACTCCTACCTGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGTCCAGTGCCCATCCTCAGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TIRLGQHTPTWQEEK*ATIITRPVPILSLQ
Trigger: CTGCAGGCTGAGGATGGGCACTGGACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCAGGTAGGAGTATGCTGCCCCAGCCTGATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472272.1
CDS CCA 90 bp ATCCAGGGTGGCCATACCATCAGGCTGGGGCAGCATACTCCTACCTaGCAGGAGGAAAAGTGGGCCACCATAATCACCCGTCCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: IQGGHTIRLGQHTPT*QEEKWATIITRPVP
Trigger: GGGCACTGGACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCAGGTAGGAGTATGCTGCCCCAGCCTGATGGTATGGCCACCCTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472272.1
CDS CCA 90 bp GTAGACACCGGACTCCTCTCTCCTGGGCCTCGATGTCAGGATGCCTaGTGGAAGAGAAGGCTGAAACACACCCAGCATGCATGCCCCCAC +
Preference number: 5 (lower is better)
Translates to: VDTGLLSPGPRCQDA*WKRRLKHTQHACPH
Trigger: GTGGGGGCATGCATGCTGGGTGTGTTTCAGCCTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS CCA 90 bp CTCAATGTGCCGCAGGTACCGCACAATCTCTTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCACGTGGCAAGTGATCAGGAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LNVPQVPHNLFSVSG*QRDACHVASDQEAW
Trigger: CCAGGCCTCCTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAAGAGATTGTGCGGTACCTGCGGCACATTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522411.5
CDS-3UTR CAA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCACCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ATGAGTCATCTGGGACAGGTCACCCTCCCAGCACCGAGAAGCCGACGGGGGAGGCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: MSHLGQVTLPAPRSRRGRQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...CCTCCCCCGTCGGCTTCTCGGTGCTGGGAGGGTGACCTGTCCCAGATGACTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: LRGWSPRQGYGRAPQPGQQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...CTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGCCTCACTACCTTGAGGCCGTGCCCAGAGGTGGCAGAAGGCGCTGTGCCTCCTTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: SLTTLRPCPEVAEGAVPPCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...AGGAGGCACAGCGCCTTCTGCCACCTCTGGGCACGGCCTCAAGGTAGTGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGCACACTACCTGCCATaGTCACAGGGTTGCCCTCGT +
Preference number: 5 (lower is better)
Translates to: GHGSCAPFLTQARQATFRAHYLP*SQGCPR
Trigger: ACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCACCCTGCTGCACAGACTaGGGATGTTCCATGACAGAC +
Preference number: 5 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSPCCTD*GCSMTD
Trigger: GTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGG...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCGCTGCGTCCTGTGACTaGAAGGCCACTGCGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSAASCD*KATAAS
Trigger: ACTGGCCGCAGTGGCCTTCAAGTCACAGGACGCAGC...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419093.5
ENST00000627118.2
CDS TCA 90 bp TCTCTCCTGGGCCTCGATGTCAGGATGCCTGGTGGAAGAGAAGGCTaGAACACACCCAGCATGCATGCCCCCACAGCATCATCCTCACCC +
Preference number: 5 (lower is better)
Translates to: SLLGLDVRMPGGREG*NTPSMHAPTASSSP
Trigger: GGGTGAGGATGATGCTGTGGGGGCATGCATGCTGGGTGTGTTTCAGCCTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS GCA 90 bp GTACCGCACAATCTCTTCTCTGTATCCGGCTGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAGGAGGCCTGGCAGGAGGAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: VPHNLFSVSGWQRDA*HVASDQEAWQEEKW
Trigger: CCACTTTTCCTCCTGCCAGGCCTCCTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAAGAGATTGTGCGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
CDS GCA 90 bp GTGGACTTATCCTCAATGTGCAGGCCCCAGCCACCGTCAGGGAGCTaGACTGACCGCAGGTACCGCACAATCTCTTCTCTGTATCCGGCT +
Preference number: 5 (lower is better)
Translates to: VDLSSMCRPQPPSGS*TDRRYRTISSLYPA
Trigger: AGCCGGATACAGAGAAGAGATTGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGGCTGGGGCCTGCACATTGAGGATAAGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
CDS GCA 90 bp CCACTGGTCCTCATGGGCCTCTGGAGACCCACAGGAGCTCACACTTaGTTGCTGGCCAGGATAAGACACCAAGAAGGATCCAGGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PLVLMGLWRPTGAHT*LLARIRHQEGSRAQ
Trigger: CTGAGCCCTGGATCCTTCTTGGTGTCTTATCCTGGCCAGCAAGCAAGTGTGAGCTCCTGTGGGTCTCCAGAGGCCCATGAGGACCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS CCA 90 bp GCCACAATGTGTTCATACAGCTTCTGCACGGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCATACAGGTTGAGGAGCGCATATACC +
Preference number: 5 (lower is better)
Translates to: ATMCSYSFCTARCRR*ALWWCSYRLRSAYT
Trigger: GGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACACATTGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGGCCCTCTGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: RRELTGLPGEASAQNLALWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...GAGGGCCAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGTCCCCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: AIHGCTLPAIVTGLPSCPPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...GGGACACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGCCAGGACCCCTTCTGGAAAACCGTTTaGTACAGTCTGACCATGGCT +
Preference number: 5 (lower is better)
Translates to: GWSPRQGYGRAPQPGQDPFWKTV*YSLTMA
Trigger: AGCCATGGTCAGACTGTACAAAACGGTTTTCCAGAA...GGGGTCCTGGCCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGGCTAGAAGGGAGCTCACAGGATTGCCTGGGGAAGCCTCGGCCCAAAACCTGCTCCTCACGTCACTCTaGTTCCCTAAACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EARRELTGLPGEASAQNLLLTSL*FPKPGW
Trigger: CCAGCCTGGTTTAGGGAACAAGAGTGACGTGAGGAG...CAGGTTTTGGGCCGAGGCTTCCCCAGGCAATCCTGTGAGCTCCCTTCTAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAGCTGCGTCCTGTGACTaGAAGGCCACTGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: GHGSCAPFLTQARQATFRAASCD*KATVKE
Trigger: TTCCTTCACAGTGGCCTTCAAGTCACAGGACGCAGC...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS GCA 90 bp TCAAGTAGACACCGGACTCCTCTCTCCTGGGCCTCGATGTCAGGATaGCTGGTGGAAGAGAAGGCTGAAACACACCCAGCATGCATGCCC +
Preference number: 5 (lower is better)
Translates to: SSRHRTPLSWASMSG*LVEEKAETHPACMP
Trigger: GGGCATGCATGCTGGGTGTGTTTCAGCCTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS-3UTR CAA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTACGTGCCCTCCGTCATaGCTGCTGCAGTGCTCTACG +
Preference number: 5 (lower is better)
Translates to: STEKPTGEEQTPLHCDPITCPPS*LLQCST
Trigger: CGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGT...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CAA 90 bp TCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACATCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: SWWCPLSRACQGDESSGTSSGAT*FLCASQ
Trigger: CTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGA...TGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAACCCGGATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: EVEGLEPKTGLWEGSPTRMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...CCGGGTTGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCGCTGCGTCCTGTGACTaGAAGGCCATGGAACGCACA +
Preference number: 5 (lower is better)
Translates to: RLHRYSCHLLLVVSFVKSAASCD*KAMERT
Trigger: TGTGCGTTCCATGGCCTTCAAGTCACAGGACGCAGC...GCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CAA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCAGCTGCGTCCTGTGACTaGAAGGCCATGGAACGCACA +
Preference number: 5 (lower is better)
Translates to: GCTGTAAISSWWCPLSRAAASCD*KAMERT
Trigger: TGTGCGTTCCATGGCCTTCAAGTCACAGGACGCAGC...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CAA 90 bp CCCCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PPQTEAAPVQLPSPLGGVSWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...GACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAATGTGCAGGGAAGTGTaGACACTGAACAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GHGSCAPFLTQARQATFRMCREV*TLNRQL
Trigger: CAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACAT...TCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp CCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTCTGGAAAACCGTTTaGTACAGTCTGACCATGGCT +
Preference number: 5 (lower is better)
Translates to: PQGSRLLCPLPHPSPTSYFWKTV*YSLTMA
Trigger: AGCCATGGTCAGACTGTACAAAACGGTTTTCCAGAA...GTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GGVLCQEHVRVMSHLGQVPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...GACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGTCACCCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GVLCQEHVRVMSHLGQVTPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...GGTGACCTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGATGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: RGCTGTAAISSWWCPLSRCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAATGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: TEAAPVQLPSPLGGVLCQCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...TTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: GVTAPVPPSSPKPDKLLSMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...TGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CCCTCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: PSDRGCTGTAAISSWWCPSWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...AGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GAGATAGAGGTTGAGGGGTTGGAGCCCAAGACAGGGTTATGGGAGGGCTCCCCAATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: EIEVEGLEPKTGLWEGSPIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...TGGGGAGCCCTCCCATAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGCCATTGTCACAGGGTaGCCCTCGTGTCCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: TAAISSWWCPLSRACQGDAIVTG*PSCPSA
Trigger: GGCTGAGGGACACGAGGGCAACCCTGTGACAATGGC...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCCCCTGCTGCACAGACTaGGGATGTTCCATGACAGAC +
Preference number: 5 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVPCCTD*GCSMTD
Trigger: GTCTGTCATGGAACATCCCAAGTCTGTGCAGCAGGG...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGGCTGCGTCCTGTGACTaGAAGGCCACTGTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLAASCD*KATVKE
Trigger: TTCCTTCACAGTGGCCTTCAAGTCACAGGACGCAGC...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGGCTGCGTCCTGTGACTaGAAGGCCACTGCGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQAASCD*KATAAS
Trigger: ACTGGCCGCAGTGGCCTTCAAGTCACAGGACGCAGC...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419093.5
ENST00000627118.2
CDS TCA 90 bp CCGGTGCCCAGTCAGGAAACAGCCACATCTCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAACATTCAGGACAGCCAGCCAGAACT +
Preference number: 5 (lower is better)
Translates to: PVPSQETATSLGTGY*GLPSCKHSGQPART
Trigger: AGTTCTGGCTGGCTGTCCTGAATGTTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTTCCTGACTGGGCACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000625922.1
ENST00000630343.2
ENST00000630761.2
CDS CCA 90 bp CCATTGGGGAGCTGTTTCTCAAGTAGACACCGGACTCCTCTCTCCTaGGCCTCGATGTCAGGATGCCTGGTGGAAGAGAAGGCTGAAACA +
Preference number: 5 (lower is better)
Translates to: PLGSCFSSRHRTPLS*ASMSGCLVEEKAET
Trigger: TGTTTCAGCCTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTACTTGAGAAACAGCTCCCCAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS-3UTR CAA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGGGCTATTCACGGATGCACACTACCTGCCATTGTCACAGGGTTGCCCTCGTGCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: LGYSRMHTTCHCHRVALVQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...CACGAGGGCAACCCTGTGACAATGGCAGGTAGTGTGCATCCGTGAATAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp ACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: TAPVPPSSPKPDKLLSEMCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...CATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: QRLHRYSCHLLLVVSFVKCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...CTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GTAAISSWWCPLSRACQGCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGGGCAAGGCAGCAGGGGTAACGAAGCTCTCAGTGACTCCTCCCAGTAGCCAGATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: LGKAAGVTKLSVTPPSSQMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...CTGGCTACTGGGAGGAGTCACTGAGAGCTTCGTTACCCCTGCTGCCTTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp GCCTCCTCAGGGGTCACGGCTCCTGTGCCCCCTTCCTCACCCAAGCCCGACAAGCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: ASSGVTAPVPPSSPKPDKPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...CTTGTCGGGCTTGGGTGAGGAAGGGGGCACAGGAGCCGTGACCCCTGAGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp CAGCCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCATGTGCAGGGAAGTGTaGACACTGAACAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: QPGPQIHIYEIEVEGLEPMCREV*TLNRQL
Trigger: CAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACAT...GGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS CCA 90 bp CAGCATCATCCTCACCCTCACACAGCCGAGCATAAGGGCAAACCCTaGAATGCTGCAGTGAGAATGGATGGGTCTAAACTGACGCCCACA +
Preference number: 5 (lower is better)
Translates to: QHHPHPHTAEHKGKP*NAAVRMDGSKLTPT
Trigger: TGTGGGCGTCAGTTTAGACCCATCCATTCTCACTGCAGCATTCCAGGGTTTGCCCTTATGCTCGGCTGTGTGAGGGTGAGGATGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS-3UTR CAA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAACGTGCCCTCCGTCATaGCTGCTGCAGTGCTCTACG +
Preference number: 5 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKTCPPS*LLQCST
Trigger: CGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGT...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000397728.8
CDS-3UTR CAA 90 bp AGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGATGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: RGCTGTAAISSWWCPLSRWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...TCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLPMLML*VNRSSA
Trigger: GGCCGACGACCGATTCACCAAGAGCATCAGCATCGG...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: STEKPTGEEQTPLHCDPIQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...AATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: TAAISSWWCPLSRACQGDCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CCTGGCCCCCAGATTCACATCTATGAGATAGAGGTTGAGGGGTTGGAGCCCAAGGAGATGGCACAGGACTaGTTGAAGACCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: PGPQIHIYEIEVEGLEPKEMAQD*LKTPAM
Trigger: CATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTC...CTTGGGCTCCAACCCCTCAACCTCTATCTCATAGATGTGAATCTGGGGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: GCTGTAAISSWWCPLSRASWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...TGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVSWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TCAGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: SDRGCTGTAAISSWWCPLSWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...CAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCAGGGAATCGCTGCGTTGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: TLKSCLCNNTEEGRESLRWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...ACGCAGCGATTCCCTGCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: TGTAAISSWWCPLSRACQQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...CTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: SPLGGVLCQEHVRVMSHLCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...CAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AGACAGAGGCTGCACCGGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: RQRLHRYSCHLLLVVSFVMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...GACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACCGGTGCAGCCTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCTCCTCACGTCACTCTaGTTCCCTAAACCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGLLTSL*FPKPGW
Trigger: CCAGCCTGGTTTAGGGAACAAGAGTGACGTGAGGAG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS TCA 90 bp CTCCGGGAAACGCTTGTGGAAATACTTAAGCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGTGTAGTCAATCATGATGTCCCCGAA +
Preference number: 5 (lower is better)
Translates to: LRETLVEILKRLHHG*GALHIGVVNHDVPE
Trigger: TTCGGGGACATCATGATTGACTACACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCCCCCTTCCTCACCCAAGCCCGACAAGCTACTTTCAGAAATGAACCTACAGTATGGTGCTCATACAGGTaGAGGAGCGCATATACCACG +
Preference number: 5 (lower is better)
Translates to: APFLTQARQATFRNEPTVWCSYR*RSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCA...TACTGTAGGTTCATTTCTGAAAGTAGCTTGTCGGGCTTGGGTGAGGAAGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: LPSPLGGVLCQEHVRVMSQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...ACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AAGGCAGGGATACTGACACTGAAGTCCTGCCTGTGTAATAACACCGAAGAGGGCTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: KAGILTLKSCLCNNTEEGCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...GCCCTCTTCGGTGTTATTACACAGGCAGGACTTCAGTGTCAGTATCCCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: ISSWWCPLSRACQGDESSCGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCTTGGTGGTGTCCTTaGTCAAGAGCATGTCAGGGT +
Preference number: 5 (lower is better)
Translates to: AAISSWWCPLSRACQGDESWWCP*SRACQG
Trigger: ACCCTGACATGCTCTTGACAAAGGACACCACCAAGA...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAACAGATCTGTGAGCCGTaGGTGCCCTGCATTTTCATG +
Preference number: 5 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKQICEP*VPCIFM
Trigger: CATGAAAATGCAGGGCACCAACGGCTCACAGATCTG...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: AAISSWWCPLSRACQGDEMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...CTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAGAGATGGCACAGGACTaGTTGAAGACCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKEMAQD*LKTPAM
Trigger: CATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTC...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCATGTGCAAACCTGACAGATGTCAAGGGTCCCAACACAGTTCCTTCAGCGAAAATGTGCAGGGAAGTGTaGACACTGAACAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ACANLTDVKGPNTVPSAKMCREV*TLNRQL
Trigger: CAGCTGCCTGTTCAGTGTCAACACTTCCCTGCACAT...TTTCGCTGAAGGAACTGTGTTGGGACCCTTGACATCTGTCAGGTTTGCACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: TAAISSWWCPLSRACQGDMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CCAGCACCGAGAAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAACCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: PAPRSRRGRNRLLCIVIQPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...TTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTTCTCGGTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTATAGAGGTTGAGGGGTaGGAGCCCAAGACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: ISSWWCPLSRACQGDESSIEVEG*EPKTGL
Trigger: TAACCCTGTCTTGGGCTCCAACCCCTCAACCTCTAT...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp CTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTGGGACAGTTCTGGAAAACCGTTTaGTACAGTCTGACCATGGCT +
Preference number: 5 (lower is better)
Translates to: LGGVLCQEHVRVMSHLGQFWKTV*YSLTMA
Trigger: AGCCATGGTCAGACTGTACAAAACGGTTTTCCAGAA...CTGTCCCAGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTTGCGGCCAGTCGCCATaGGGGAGCTGTTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSICGQSP*GSCFSS
Trigger: ACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCA...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp AATGAACCTACAGTAAAAATCAAGAGTCTAAGCCACCCACCCTGTCCCCATCCCATGGCACAGGACTTGTaGAAGACCCCAGCAATGTTT +
Preference number: 5 (lower is better)
Translates to: NEPTVKIKSLSHPPCPHPMAQDL*KTPAMF
Trigger: AAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCAT...GGGATGGGGACAGGGTGGGTGGCTTAGACTCTTGATTTTTACTGTAGGTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630761.2
CDS-3UTR CAA 90 bp CAGACTCCTCTGCATTGTGATCCAATTGTGAACAAAAAGTCCTCTTCGTGGAACGAGATGGCACAGGACTaGTTGAAGACCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: QTPLHCDPIVNKKSSSWNEMAQD*LKTPAM
Trigger: CATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTC...GTTCCACGAAGAGGACTTTTTGTTCACAATTGGATCACAATGCAGAGGAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp GCCCACTCGACACTAAGGAATCACACAGGCACAGCTGCTCCTCTCCCAAGAACTCCTCCTATGTGGACATaGTATCACGTTTATTTATCT +
Preference number: 5 (lower is better)
Translates to: AHSTLRNHTGTAAPLPRTPPMWT*YHVYLS
Trigger: AGATAAATAAACGTGATACAATGTCCACATAGGAGG...AGTTCTTGGGAGAGGAGCAGCTGTGCCTGTGTGATTCCTTAGTGTCGAGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp GGTACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: GTAAISSWWCPLSRACQGPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...ACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGG +
Preference number: 5 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIQRTSM*MVFEIG
Trigger: CCCGATCTCGAAAACCATCAACATGCTTGTGCGCTG...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp TTTCTGTGTCCACAAGACTACTATAAACCCTGTAGACACCTCACAAACAGCATTGAGATGGCACAGGACTaGTTGAAGACCCCAGCAATG +
Preference number: 5 (lower is better)
Translates to: FLCPQDYYKPCRHLTNSIEMAQD*LKTPAM
Trigger: CATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTC...AATGCTGTTTGTGAGGTGTCTACAGGGTTTATAGTAGTCTTGTGGACACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397728.8
ENST00000457828.6
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: TAAISSWWCPLSRACQGDPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ACAGCTGCCATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATCCTCCTATGTGGACATaGTATCACGTTTATTTATCT +
Preference number: 5 (lower is better)
Translates to: TAAISSWWCPLSRACQGDPPMWT*YHVYLS
Trigger: AGATAAATAAACGTGATACAATGTCCACATAGGAGG...ATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGATGGCAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397728.8
ENST00000630761.2
CDS-3UTR CAA 90 bp CTGGTACCGTTCCTTGTCCTACCGTCTATGTTGATATTAAAAATATCAAGAGTCTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCC +
Preference number: 5 (lower is better)
Translates to: LVPFLVLPSMLILKISRVCSGKR*WKYLSA
Trigger: GGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCA...GACTCTTGATATTTTTAATATCAACATAGACGGTAGGACAAGGAACGGTACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000630343.2
CDS-3UTR CAA 90 bp AAGCCGACGGGGGAGGAACAGACTCCTCTGCATTGTGATCCAATTGTGAACAAACCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: KPTGEEQTPLHCDPIVNKPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...TTTGTTCACAATTGGATCACAATGCAGAGGAGTCTGTTCCTCCCCCGTCGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000630343.2
ENST00000630761.2
CDS-3UTR CAA 90 bp ATCTCCTCTTGGTGGTGTCCTTTGTCAAGAGCATGTCAGGGTGATGAGTCATCTCCTCTAAACAATGGATaGAACACAGATGTGATTTCT +
Preference number: 5 (lower is better)
Translates to: ISSWWCPLSRACQGDESSPLNNG*NTDVIS
Trigger: AGAAATCACATCTGTGTTCAATCCATTGTTTAGAGG...AGATGACTCATCACCCTGACATGCTCTTGACAAAGGACACCACCAAGAGGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp GCAGGTAGGTCCACGTCTGCCGGCCCCTCTCGCAGTTaGGTCGCCAGCGGCCGAGGTCGGTGGCGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: AGRSTSAGPSRS*VASGRGRWRAR
Trigger: CCGAGCCCGCCACCGACCTCGGCCGCTGGCGACTCAACTGCGAGAGGGGCCGGCAGACGTGGACCTACCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000472272.1
ENST00000522411.5
CDS TCA 72 bp CCAGGGCTCAGCGGGCCCAGCTCAACTGTGGGTCCCTaGCTGTCCTGCCCTCAGGGGTCCCCCAGACCCTGC +
Preference number: 6 (lower is better)
Translates to: PGLSGPSSTVGP*LSCPQGSPRPC
Trigger: GCAGGGTCTGGGGGACCCCTGAGGGCAGGACAGTCAGGGACCCACAGTTGAGCTGGGCCCGCTGAGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS GCA 72 bp TTGCTGCTGCAGTGCTCTACGCCGCCCACTGCCAGCTaGCAGATGTCCGCACCCGGGACCTGCCGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LLLQCSTPPTAS*QMSAPGTCRPA
Trigger: GGCTGGGCGGCAGGTCCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000457828.6
CDS GCA 72 bp CCCTCGGCGCCGCAGACACGTGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGCCCACTGCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PSAPQTRALRHC*CSALRRPLPAA
Trigger: GGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCCGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS GCA 72 bp GCCCCCTCGGCGCCGCAGACACGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGCCGCCCACTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: APSAPQTRALRH*CCSALRRPLPA
Trigger: AGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCCGAGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000522411.5
CDS GCA 72 bp CCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTGCTaGTGCAGTGCTCTACGCCGCCCACTGCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: PGRGDSRALRHC*CSALRRPLPAA
Trigger: GGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS CAA 72 bp GAGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATaGCTGCTGCAGTGCTCTACGCCGCCCACTGCCAGC +
Preference number: 6 (lower is better)
Translates to: EPGARGLTCPPS*LLQCSTPPTAS
Trigger: GCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS GCA 72 bp AGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATTaGTGCTGCAGTGCTCTACGCCGCCCACTGCCAGCT +
Preference number: 6 (lower is better)
Translates to: SPGRGDSRALRH*CCSALRRPLPA
Trigger: AGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS GCA 72 bp TCCGTCATTGCTGCTGCAGTGCTCTACGCCGCCCACTaGCAGCTGCCAGATGTCCGCACCCGGGACCTGCCG +
Preference number: 6 (lower is better)
Translates to: SVIAAAVLYAAH*QLPDVRTRDLP
Trigger: CGGCAGGTCCCGGGTGCGGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356396.8
ENST00000457828.6
CDS GCA 72 bp TCGGCGCCGCAGACACGTGCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SAPQTRALRHCC*SALRRPLPAAR
Trigger: TCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGTCTGCGGCGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS GCA 72 bp TCGGCCCTCTGCTGCCGCCGACAGAACTCTAAGCCCTaGGTGAGGGTCTCCCGGATCTCCGCTGCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: SALCCRRQNSKP*VRVSRISAALC
Trigger: GCACAGGGCAGCGGAGATCCGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp CCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTGCTaGCGCCGACAGAACTCTAAGCCCTGCGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: PQEPSQEPSALC*RRQNSKPCVRV
Trigger: GACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000484808.1
ENST00000522411.5
ENST00000625491.1
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp CGCATTCGTCAGGAGCCCGGGGCGAGGGGACTCACGTaGCCTCCGTCATTGCTGCTGCAGTGCTCTACGCCG +
Preference number: 6 (lower is better)
Translates to: RIRQEPGARGLT*PPSLLLQCSTP
Trigger: CGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTCCTGACGAATGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450351.1
ENST00000457828.6
CDS GCA 72 bp GGGCGAGGGGACTCACGTGCCCTCCGTCATTGCTGCTaGAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: GRGDSRALRHCC*SALRRPLPAAR
Trigger: TCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS CAA 90 bp ATTCGTCAGGAGCCCGGGGCGAGGGGACTCACGTGCCCTCCGTCATaGCTGCTGCAGTGCTCTACGCCGCCCACTGCCAGCTGCCAGATG +
Preference number: 6 (lower is better)
Translates to: IRQEPGARGLTCPPS*LLQCSTPPTASCQM
Trigger: CATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCTCGCCCCGGGCTCCTGACGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS GCA 72 bp GCCGCAGACACGTGCCCTCCGTCATTGCTGCTGCAGTaGTCTACGCCGCCCACTGCCAGCTGCCAGATGTCC +
Preference number: 6 (lower is better)
Translates to: AADTCPPSLLLQ*STPPTASCQMS
Trigger: GGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGTCTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356396.8
CDS GCA 72 bp ACTCCCCAGGAGCCTTCCCAGGAGCCATCGGCCCTCTaGTGCCGCCGACAGAACTCTAAGCCCTGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: TPQEPSQEPSAL*CRRQNSKPCVR
Trigger: CCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGATGGCTCCTGGGAAGGCTCCTGGGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000484808.1
ENST00000522411.5
ENST00000625491.1
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp GCCTGTGGTGCCCGCCCGCCTCAAGCAGAGCCTGGATaGCGAATGCGGTGTCCCAGATCTGTGAGCCGTTGG +
Preference number: 6 (lower is better)
Translates to: ACGARPPQAEPG*RMRCPRSVSRW
Trigger: CCAACGGCTCACAGATCTGGGACACCGCATTCGCCATCCAGGCTCTGCTTGAGGCGGGCGGGCACCACAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CAA 90 bp CGGAGCAGCCAGCTGTGCGGCGTGTACAGCTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAGTCAATGCTGGCGAAGTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: RSSQLCGVYSSSGAT*FLCASQSMLAKSST
Trigger: TGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp TGCACGGCCCGCTGCCGCAGGTGGGCACTGTGGTGGTaGTCATACAGGTTGAGGAGCGCATATACCACGCGG +
Preference number: 6 (lower is better)
Translates to: CTARCRRWALWW*SYRLRSAYTTR
Trigger: CCGCGTGGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp CCGGGACAGCAGGAAGTCACAGGCCCGGGAGACCTCTaGACAGGCAGTCCCATCTCGGTAGGTCTGCCCCAT +
Preference number: 6 (lower is better)
Translates to: PGQQEVTGPGDL*TGSPISVGLPH
Trigger: ATGGGGCAGACCTACCGAGATGGGACTGCCTGTGCAGAGGTCTCCCGGGCCTGTGACTTCCTGCTGTCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp AGGGGACTCACGTGCCCTCCGTCATTGCTGCTGCAGTaGTCTACGCCGCCCACTGCCAGCTGCCAGATGTCC +
Preference number: 6 (lower is better)
Translates to: RGLTCPPSLLLQ*STPPTASCQMS
Trigger: GGACATCTGGCAGCTGGCAGTGGGCGGCGTAGAGCACTGCAGCAGCAATGACGGAGGGCACGTGAGTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457828.6
CDS CAA 72 bp CAGCTGTGCGGCGTGTACAGCTCGTCGGGGGCCACGTaGTTCCTCTGCGCCAGCCAGTCAATGCTGGCGAAG +
Preference number: 6 (lower is better)
Translates to: QLCGVYSSSGAT*FLCASQSMLAK
Trigger: CTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGTACACGCCGCACAGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp CGGGGGCCACGTTGTTCCTCTGCGCCAGCCAGTCAATaGTGGCGAAGTCCTCCACATAGAGCTCCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: RGPRCSSAPASQ*WRSPPHRAPGG
Trigger: TCCGCCAGGAGCTCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp GGCGTGTACAGCTCGTCGGGGGCCACGTTGTTCCTCTaGGCCAGCCAGTCAATGCTGGCGAAGTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: GVYSSSGATLFL*ASQSMLAKSST
Trigger: TGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCCCCGACGAGCTGTACACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp TTGAGGAGCGCATATACCACGCGGAGCAGCCAGCTGTaGGGCGTGTACAGCTCGTCGGGGGCCACGTTGTTC +
Preference number: 6 (lower is better)
Translates to: LRSAYTTRSSQL*GVYSSSGATLF
Trigger: GAACAACGTGGCCCCCGACGAGCTGTACACGCCGCACAGCTGGCTGCTCCGCGTGGTATATGCGCTCCTCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp GGGCCACGTTGTTCCTCTGCGCCAGCCAGTCAATGCTaGCGAAGTCCTCCACATAGAGCTCCTGGCGGAGGC +
Preference number: 6 (lower is better)
Translates to: GPRCSSAPASQC*RSPPHRAPGGG
Trigger: GCCTCCGCCAGGAGCTCTATGTGGAGGACTTCGCCAGCATTGACTGGCTGGCGCAGAGGAACAACGTGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp AAAACCCTAGACCAGGCTGGGCCAGGATCCCAAGGGTaGTCCAGGGTGGCCATACCATCAGGCTGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KTLDQAGPGSQG*SRVAIPSGWGS
Trigger: GCTGCCCCAGCCTGATGGTATGGCCACCCTGGATCACCCTTGGGATCCTGGCCCAGCCTGGTCTAGGGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472272.1
CDS GCA 72 bp AATCGGTCGTCGGCCACAATGTGTTCATACAGCTTCTaGACGGCCCGCTGCCGCAGGTGGGCACTGTGGTGG +
Preference number: 6 (lower is better)
Translates to: NRSSATMCSYSF*TARCRRWALWW
Trigger: CCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACACATTGTGGCCGACGACCGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp CCTGCAGGAGCAGCACAGCCTTCAAGGCCTCAGCCGTaGAGTCAGAAACGATCCAGCCGCAGTCCAGCGTAC +
Preference number: 6 (lower is better)
Translates to: PAGAAQPSRPQP*SQKRSSRSPAY
Trigger: GTACGCTGGACTGCGGCTGGATCGTTTCTGACTGCACGGCTGAGGCCTTGAAGGCTGTGCTGCTCCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp TCGGCCCTCTGCTGCCGCCGACAGAACTCTAAGCCCTaGGTGAGGGTCTCCCTGGAACACGAGATTGGTCCA +
Preference number: 6 (lower is better)
Translates to: SALCCRRQNSKP*VRVSLEHEIGP
Trigger: TGGACCAATCTCGTGTTCCAGGGAGACCCTCACGCAGGGCTTAGAGTTCTGTCGGCGGCAGCAGAGGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484808.1
ENST00000625491.1
CDS CCA 72 bp TTCTGCACGGCCCGCTGCCGCAGGTGGGCACTGTGGTaGTGCTCATACAGGTTGAGGAGCGCATATACCACG +
Preference number: 6 (lower is better)
Translates to: FCTARCRRWALW*CSYRLRSAYTT
Trigger: CGTGGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp AGCTTCTGCACGGCCCGCTGCCGCAGGTGGGCACTGTaGTGGTGCTCATACAGGTTGAGGAGCGCATATACC +
Preference number: 6 (lower is better)
Translates to: SFCTARCRRWAL*WCSYRLRSAYT
Trigger: GGTATATGCGCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp AGTCCGGGATTCTGGAGACATGCTCCTGGAAGGCAGTaGAGGCGGGCCCGTCCACATACCAGCGCACAAGCA +
Preference number: 6 (lower is better)
Translates to: SPGFWRHAPGRQ*RRARPHTSAQA
Trigger: TGCTTGTGCGCTGGTATGTGGACGGGCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCCGGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp TGCCGTCAAGGCCCATCCAGAGATAGTCCGGGATTCTaGAGACATGCTCCTGGAAGGCAGTGGAGGCGGGCC +
Preference number: 6 (lower is better)
Translates to: CRQGPSRDSPGF*RHAPGRQWRRA
Trigger: GGCCCGCCTCCACTGCCTTCCAGGAGCATGTCTCCAGAATCCCGGACTATCTCTGGATGGGCCTTGACGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp ACCAGGCTGGGCCAGGATCCCAAGGGTGATCCAGGGTaGCCATACCATCAGGCTGGGGCAGCATACTCCTAC +
Preference number: 6 (lower is better)
Translates to: TRLGQDPKGDPG*PYHQAGAAYSY
Trigger: GTAGGAGTATGCTGCCCCAGCCTGATGGTATGGCCACCCTGGATCACCCTTGGGATCCTGGCCCAGCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472272.1
CDS CAA 90 bp GTGAGGGTCTCCCGGATCTCCGCTGCCCTGTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCCTGCATCACGGCTGAGGTGCACTCC +
Preference number: 6 (lower is better)
Translates to: VRVSRISAALCSGKR*WKYLSACITAEVHS
Trigger: GGAGTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGAGACCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp CAGCATCGCAGAGCCGTTCTCTGGGGATGTGCTCGGTaGCATGGGGACACTTCTCCTGCAGGAGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: QHRRAVLWGCAR*HGDTSPAGAAQ
Trigger: CTGTGCTGCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp AGCGCAGTCCCAAACACGGTGGACTTATCCTCAATGTaGAGGCCCCAGCCACCGTCAGGGAGCTGCACTGAC +
Preference number: 6 (lower is better)
Translates to: SAVPNTVDLSSM*RPQPPSGSCTD
Trigger: GTCAGTGCAGCTCCCTGACGGTGGCTGGGGCCTGCACATTGAGGATAAGTCCACCGTGTTTGGGACTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
CDS GCA 72 bp GCCACAATGTGTTCATACAGCTTCTGCACGGCCCGCTaGCGCAGGTGGGCACTGTGGTGGTGCTCATACAGG +
Preference number: 6 (lower is better)
Translates to: ATMCSYSFCTAR*RRWALWWCSYR
Trigger: CCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACACATTGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS GCA 72 bp ACAGCCACAGCATCGCAGAGCCGTTCTCTGGGGATGTaGTCGGTGACATGGGGACACTTCTCCTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: TATASQSRSLGM*SVTWGHFSCRS
Trigger: GCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGATGCTGTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp TGTTCATACAGCTTCTGCACGGCCCGCTGCCGCAGGTaGGCACTGTGGTGGTGCTCATACAGGTTGAGGAGC +
Preference number: 6 (lower is better)
Translates to: CSYSFCTARCRR*ALWWCSYRLRS
Trigger: GCTCCTCAACCTGTATGAGCACCACCACAGTGCCCACCTGCGGCAGCGGGCCGTGCAGAAGCTGTATGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp TCGCAGAGCCGTTCTCTGGGGATGTGCTCGGTGACATaGGGACACTTCTCCTGCAGGAGCAGCACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SQSRSLGMCSVT*GHFSCRSSTAF
Trigger: GAAGGCTGTGCTGCTCCTGCAGGAGAAGTGTCCCCATGTCACCGAGCACATCCCCAGAGAACGGCTCTGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CAA 90 bp CTGGTCCTCATGGGCCTCTGGAGACCCACAGGAGCTCACACTTGCTaGCTGGCCAGGATAAGACACCAAGAAGGATCCAGGGCTCAGCGG +
Preference number: 6 (lower is better)
Translates to: LVLMGLWRPTGAHTC*LARIRHQEGSRAQR
Trigger: CCGCTGAGCCCTGGATCCTTCTTGGTGTCTTATCCTGGCCAGCAAGCAAGTGTGAGCTCCTGTGGGTCTCCAGAGGCCCATGAGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS TCA 72 bp AATGTGCAGGCCCCAGCCACCGTCAGGGAGCTGCACTaGCCGCAGGTACCGCACAATCTCTTCTCTGTATCC +
Preference number: 6 (lower is better)
Translates to: NVQAPATVRELH*PQVPHNLFSVS
Trigger: GGATACAGAGAAGAGATTGTGCGGTACCTGCGGTCAGTGCAGCTCCCTGACGGTGGCTGGGGCCTGCACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
CDS GCA 72 bp AATCTCTTCTCTGTATCCGGCTGGCAGAGGGATGCGTaGCACGTGGCAAGTGATCAGGAGGCCTGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: NLFSVSGWQRDA*HVASDQEAWQE
Trigger: CTCCTGCCAGGCCTCCTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAAGAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
CDS GCA 72 bp CACCGGACTCCTCTCTCCTGGGCCTCGATGTCAGGATaGCTGGTGGAAGAGAAGGCTGAAACACACCCAGCA +
Preference number: 6 (lower is better)
Translates to: HRTPLSWASMSG*LVEEKAETHPA
Trigger: TGCTGGGTGTGTTTCAGCCTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS CCA 72 bp TCTCTGTATCCGGCTGGCAGAGGGATGCGTGCCACGTaGCAAGTGATCAGGAGGCCTGGCAGGAGGAAAAGT +
Preference number: 6 (lower is better)
Translates to: SLYPAGRGMRAT*QVIRRPGRRKS
Trigger: ACTTTTCCTCCTGCCAGGCCTCCTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
CDS CCA 72 bp CCGCAGGTACCGCACAATCTCTTCTCTGTATCCGGCTaGCAGAGGGATGCGTGCCACGTGGCAAGTGATCAG +
Preference number: 6 (lower is better)
Translates to: PQVPHNLFSVSG*QRDACHVASDQ
Trigger: CTGATCACTTGCCACGTGGCACGCATCCCTCTGCCAGCCGGATACAGAGAAGAGATTGTGCGGTACCTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
CDS CCA 72 bp CGGATCTCCGCTGCCCTGTGCTCCGGGAAACGCTTGTaGAAATACTTAAGCGCCTGCATCACGGCTGAGGTG +
Preference number: 6 (lower is better)
Translates to: RISAALCSGKRL*KYLSACITAEV
Trigger: CACCTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp CTGGGGCAGCATACTCCTACCTGGCAGGAGGAAAAGTaGGCCACCATAATCACCCGTCCAGTGCCCATCCTC +
Preference number: 6 (lower is better)
Translates to: LGQHTPTWQEEK*ATIITRPVPIL
Trigger: GAGGATGGGCACTGGACGGGTGATTATGGTGGCCCACTTTTCCTCCTGCCAGGTAGGAGTATGCTGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472272.1
CDS CAA 72 bp GAGGCGGGCCCGTCCACATACCAGCGCACAAGCATGTaGATGGTTTTCGAGATCGGGCCGATGCTGATGCTC +
Preference number: 6 (lower is better)
Translates to: EAGPSTYQRTSM*MVFEIGPMLML
Trigger: GAGCATCAGCATCGGCCCGATCTCGAAAACCATCAACATGCTTGTGCGCTGGTATGTGGACGGGCCCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CAA 72 bp TCCCGGATCTCCGCTGCCCTGTGCTCCGGGAAACGCTaGTGGAAATACTTAAGCGCCTGCATCACGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SRISAALCSGKR*WKYLSACITAE
Trigger: CTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGTTTCCCGGAGCACAGGGCAGCGGAGATCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp CAGAGCCTGGATGGCGAATGCGGTGTCCCAGATCTGTaGGCCGTTGGTGCCCTGCATTTTCATGCCGTCAAG +
Preference number: 6 (lower is better)
Translates to: QSLDGECGVPDL*AVGALHFHAVK
Trigger: CTTGACGGCATGAAAATGCAGGGCACCAACGGCTCACAGATCTGGGACACCGCATTCGCCATCCAGGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp GGGTTATCTGGGACCTGTGAGAGCCTCAGGAACTCATaGGCCTTCTGCAGGCAGGACGAAAACTCGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GLSGTCESLRNS*AFCRQDENSGL
Trigger: CAGGCCCGAGTTTTCGTCCTGCCTGCAGAAGGCTCATGAGTTCCTGAGGCTCTCACAGGTCCCAGATAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp TGCAGTCAGAAACGATCCAGCCGCAGTCCAGCGTACTaGAGGAGAAGCCACCCTTGCGCATCTGGCGGTAGT +
Preference number: 6 (lower is better)
Translates to: CSQKRSSRSPAY*RRSHPCASGGS
Trigger: ACTACCGCCAGATGCGCAAGGGTGGCTTCTCCTTCAGTACGCTGGACTGCGGCTGGATCGTTTCTGACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp AGCTGTTTCTCAAGTAGACACCGGACTCCTCTCTCCTaGGCCTCGATGTCAGGATGCCGAACGGCCATCAGC +
Preference number: 6 (lower is better)
Translates to: SCFSSRHRTPLS*ASMSGCRTAIS
Trigger: GCTGATGGCCGTTCGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTACTTGAGAAACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000419093.5
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000627118.2
ENST00000630343.2
ENST00000630761.2
CDS CCA 72 bp TCCTGTGACTTGAAGGCCACTGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTAGACACCGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: SCDLKATAASRH*GAVSQVDTGLL
Trigger: GAGGAGTCCGGTGTCTACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCAGTGGCCTTCAAGTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419093.5
ENST00000627118.2
CDS GCA 72 bp CTCATGGGCCTCTGGAGACCCACAGGAGCTCACACTTaGTTGCTGGCCAGGATAAGACACCAAGAAGGATCC +
Preference number: 6 (lower is better)
Translates to: LMGLWRPTGAHT*LLARIRHQEGS
Trigger: GGATCCTTCTTGGTGTCTTATCCTGGCCAGCAAGCAAGTGTGAGCTCCTGTGGGTCTCCAGAGGCCCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS CCA 72 bp TCAGGACAGCCAGCCAGAACTTCCCCCAGGAGGGGATaGCCACAGCACCACCTTTCTTGTGAAGAATGTTCC +
Preference number: 6 (lower is better)
Translates to: SGQPARTSPRRG*PQHHLSCEECS
Trigger: GGAACATTCTTCACAAGAAAGGTGGTGCTGTGGCCATCCCCTCCTGGGGGAAGTTCTGGCTGGCTGTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
CDS CCA 72 bp AGACCCCAGCAATGTTTTCCTGCGGCCAGTCGCCATTaGGGAGCTGTTTCTCAAGTAGACACCGGACTCCTC +
Preference number: 6 (lower is better)
Translates to: RPQQCFPAASRH*GAVSQVDTGLL
Trigger: GAGGAGTCCGGTGTCTACTTGAGAAACAGCTCCCCAATGGCGACTGGCCGCAGGAAAACATTGCTGGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000474319.1
ENST00000491729.1
ENST00000522411.5
ENST00000625576.2
ENST00000626535.1
ENST00000630343.2
ENST00000630702.1
ENST00000630761.2
CDS CAA 72 bp ATGGGCCTCTGGAGACCCACAGGAGCTCACACTTGCTaGCTGGCCAGGATAAGACACCAAGAAGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: MGLWRPTGAHTC*LARIRHQEGSR
Trigger: CCTGGATCCTTCTTGGTGTCTTATCCTGGCCAGCAAGCAAGTGTGAGCTCCTGTGGGTCTCCAGAGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS TCA 72 bp TCCTGTAGCTCGTGTAGGAGATGGCACAGGACTTGTTaGAGACCCCAGCAATGTTTTCCTGCGGCCAGTCGC +
Preference number: 6 (lower is better)
Translates to: SCSSCRRWHRTC*RPQQCFPAASR
Trigger: GCGACTGGCCGCAGGAAAACATTGCTGGGGTCTTCAACAAGTCCTGTGCCATCTCCTACACGAGCTACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000474319.1
ENST00000491729.1
ENST00000522411.5
ENST00000625576.2
ENST00000626535.1
ENST00000630343.2
ENST00000630702.1
ENST00000630761.2
CDS CCA 72 bp AGCTGTTTCTCAAGTAGACACCGGACTCCTCTCTCCTaGGCCTCGATGTCAGGATGCCTGGTGGAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: SCFSSRHRTPLS*ASMSGCLVEEK
Trigger: CTTCTCTTCCACCAGGCATCCTGACATCGAGGCCCAGGAGAGAGGAGTCCGGTGTCTACTTGAGAAACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474319.1
ENST00000491729.1
ENST00000626535.1
ENST00000630702.1
CDS TCA 72 bp AGTCAGGAAACAGCCACATCTCTGGGAACAGGGTATTaGGGCCTTCCCAGCTGTAAACATTCAGGACAGCCA +
Preference number: 6 (lower is better)
Translates to: SQETATSLGTGY*GLPSCKHSGQP
Trigger: TGGCTGTCCTGAATGTTTACAGCTGGGAAGGCCTCAATACCCTGTTCCCAGAGATGTGGCTGTTTCCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000450351.1
ENST00000457828.6
ENST00000464357.1
ENST00000522411.5
ENST00000625576.2
ENST00000625682.1
ENST00000625922.1
ENST00000630343.2
ENST00000630761.2
CDS CAA 72 bp TTGATGGTTTTCGAGATCGGGCCGATGCTGATGCTCTaGGTGAATCGGTCGTCGGCCACAATGTGTTCATAC +
Preference number: 6 (lower is better)
Translates to: LMVFEIGPMLML*VNRSSATMCSY
Trigger: GTATGAACACATTGTGGCCGACGACCGATTCACCAAGAGCATCAGCATCGGCCCGATCTCGAAAACCATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2
CDS TCA 72 bp ACGCTTGTGGAAATACTTAAGCGCCTGCATCACGGCTaGGGTGCACTCCACATAGGTGTAGTCAATCATGAT +
Preference number: 6 (lower is better)
Translates to: TLVEILKRLHHG*GALHIGVVNHD
Trigger: ATCATGATTGACTACACCTATGTGGAGTGCACCTCAGCCGTGATGCAGGCGCTTAAGTATTTCCACAAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000356396.8
ENST00000397728.8
ENST00000457828.6
ENST00000522411.5
ENST00000625576.2
ENST00000630343.2
ENST00000630761.2