Pregenerated sensors for LSMEM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000181016Ensembl transcript IDs: ENST00000312849.4, ENST00000439068.6, ENST00000455302.5, ENST00000471030.1, ENST00000486022.1
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTaGGGAAGTGCACTTTCTCAGTTCCTAACCCTGTACACTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: KWAPGVGCLTRSSVA*GSALSQFLTLYTPR Trigger: CCTGGGAGTGTACAGGGTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR GCA 90 bp | CAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTaGCTGAGGAAGTGCACTTTCTCAGTTCCTAACCCTGTACACTCC | + |
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Preference number: 1 (lower is better) Translates to: QKVGPRGGLPDQIIC*LRKCTFSVPNPVHS Trigger: GGAGTGTACAGGGTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR GCA 90 bp | TTGCTATTCCCATACCCACTTGCCTTGGAATTGCTCCCATCTTGCTaGAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCT | + |
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Preference number: 1 (lower is better) Translates to: LLFPYPLALELLPSC*RKWAPGVGCLTRSS Trigger: AGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAATAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR TCA 90 bp | TTCTGTAAGAAGTTGGACGTACATAGTCAAGTTCTCTTGCTTTGTTaGTTCTCCTCCCTGCTAGCCGCCCACCCCATTAAAGTTGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: FCKKLDVHSQVLLLC*FSSLLAAHPIKVEV Trigger: CACTTCAACTTTAATGGGGTGGGCGGCTAGCAGGGAGGAGAATCAACAAAGCAAGAGAACTTGACTATGTACGTCCAACTTCTTACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR CAA 90 bp | TTAGTTGCTATTCCCATACCCACTTGCCTTGGAATTGCTCCCATCTaGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATC | + |
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Preference number: 2 (lower is better) Translates to: LVAIPIPTCLGIAPI*LQKVGPRGGLPDQI Trigger: GATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAATAGCAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR-3UTR GCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACTGTTGCCTGAGGAAGTaGACTTTCTCAGTTCCTAAC | + |
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Preference number: 2 (lower is better) Translates to: GIAPILLQKVGPRGGLPDCCLRK*TFSVPN Trigger: GTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACA...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGCAAGGTGTTAGCAGGTaGTTTCAGAAAATCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: QKVGPRGGLPDQIICCLRQGVSR*FQKIIP Trigger: AGGAATGATTTTCTGAAAGCACCTGCTAACACCTTG...CCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCATTCCCATACCCACTTaGCTTGGAATTGCTCCCATC | + |
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Preference number: 2 (lower is better) Translates to: LLMFSPANTRQQLALGPTIPIPT*LGIAPI Trigger: GATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAAT...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR GCA 90 bp | TCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCATCACTGTCCCATAGTCAAGTTCTCTTaGTTTGTTGATTCTCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SPANTRQQLALGPTHHCPIVKFS*FVDSPP Trigger: GGGAGGAGAATCAACAAAGCAAGAGAACTTGACTAT...GGGACAGTGATGGGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR CCA 90 bp | TCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCATCACTGTCCCCCTTCTGTAAGAAGTTaGACGTACATAGTCAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SPANTRQQLALGPTHHCPPSVRS*TYIVKF Trigger: GAACTTGACTATGTACGTCCAACTTCTTACAGAAGG...GGGACAGTGATGGGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCTCACCCCTTTTTAGTTaGTATTCCCATACCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: LLMFSPANTRQQLALGPTSPLFS*YSHTHL Trigger: CAAGTGGGTATGGGAATAGCAACTAAAAAGGGGTGA...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTCTCTTCCGGCTTCCATTTCCTaGGTTTGTGCCAAGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: VQLVELVESLYDHVIDSLPASIS*VCAKDW Trigger: CCAGTCCTTGGCACAAACTCAGGAAATGGAAGCCGG...AAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTCAGGGGTGGGTTGCCTaGCCAGATCATCTGTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LCVLLSLLELMQVPNILTQGWVA*PDHLLP Trigger: AGGCAACAGATGATCTGGTCAGGCAACCCACCCCTG...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTGCCCCAGGGGTGGGTTaGCTGACCAGATCATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LCVLLSLLELMQVPNILTAPGVG*LTRSSV Trigger: AACAGATGATCTGGTCAGGCAACCCACCCCTGGGGC...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATAAACCAGTGCCAGGCTaGCAATCAGCACAATTAGCA | + |
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Preference number: 2 (lower is better) Translates to: FRVQLVELVESLYDHVIDKPVPG*QSAQLA Trigger: TGCTAATTGTGCTGATTGTCAGCCTGGCACTGGTTT...ATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGGCCACAAATCTATCAGATTTCTTCCAAATCAATCAGCAGGGTGCCAAACAAGGTGTTAGCAGGTaGTTTCAGAAAATCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: GKATNLSDFFQINQQGAKQGVSR*FQKIIP Trigger: AGGAATGATTTTCTGAAAGCACCTGCTAACACCTTG...TTTGGCACCCTGCTGATTGATTTGGAAGAAATCTGATAGATTTGTGGCCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR CAA 90 bp | GAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATaGATTCTCTTAAGATCATCTATGTCTTTTCCTTCAGCTGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: ESSWLSWLSRFTIML*ILLRSSMSFPSAVS Trigger: ACTAACAGCTGAAGGAAAAGACATAGATGATCTTAAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTTGTCATGAACTTCATTaGCACAGTGAACTTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LCVLLSLLELMQVPNILTCHELH*HSELVL Trigger: CAGAACAAGTTCACTGTGTCAATGAAGTTCATGACA...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR CAA 90 bp | CAGAAAATCATTCCTTTAGTTTTGTTCAGAGTCCAGTTGGTTGAGTaGGTTGAGTCGCTTTACGATCATGTTATTGATTCTCTTAAGATC | + |
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Preference number: 2 (lower is better) Translates to: QKIIPLVLFRVQLVE*VESLYDHVIDSLKI Trigger: GATCTTAAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAACAAAACTAAAGGAATGATTTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR TCA 72 bp | CTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTaGCCAGATCATCTGTTGCCTGAGGAAGTGCACTTT | + |
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Preference number: 3 (lower is better) Translates to: LAAESGPQGWVA*PDHLLPEEVHF Trigger: AAAGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR GCA 72 bp | GGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTaGCTGAGGAAGTGCACTTTCTCAGTTCCTAACCCT | + |
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Preference number: 3 (lower is better) Translates to: GPRGGLPDQIIC*LRKCTFSVPNP Trigger: AGGGTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR TCA 72 bp | CCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTaGGGAAGTGCACTTTCTCAGTTCCTAACCCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: PGVGCLTRSSVA*GSALSQFLTLY Trigger: GTACAGGGTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCCCACCCCATTAAAGTaGAAGTGCCCTACCATAAAA | + |
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Preference number: 3 (lower is better) Translates to: LLMFSPANTRQQLALGPTPTPLK*KCPTIK Trigger: TTTTATGGTAGGGCACTTCAACTTTAATGGGGTGGG...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCTCCTTCTGTAAGAAGTaGGACGTACATAGTCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: LLMFSPANTRQQLALGPTSFCKK*DVHSQV Trigger: AACTTGACTATGTACGTCCAACTTCTTACAGAAGGA...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR TCA 72 bp | AAGTTGGACGTACATAGTCAAGTTCTCTTGCTTTGTTaGTTCTCCTCCCTGCTAGCCGCCCACCCCATTAAA | + |
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Preference number: 3 (lower is better) Translates to: KLDVHSQVLLLC*FSSLLAAHPIK Trigger: TTTAATGGGGTGGGCGGCTAGCAGGGAGGAGAATCAACAAAGCAAGAGAACTTGACTATGTACGTCCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTCTCTTCCAAGGACTGGGATTTaGTCCTCTAGAGCTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VQLVELVESLYDHVIDSLPRTGI*SSRASS Trigger: AGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGG...AAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR-3UTR CAA 90 bp | TGTTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGTTCCATTTCCTGAGTTaGTGCCAAGGACTGGGATTT | + |
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Preference number: 3 (lower is better) Translates to: CSESSWLSWLSRFTIMLLFHFLS*CQGLGF Trigger: AAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAA...CAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTTATTCCCATACCCACTaGCCTTGGAATTGCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: LCVLLSLLELMQVPNILTYSHTH*PWNCSH Trigger: ATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAATA...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| 3UTR CCA 72 bp | ACTTGTTCTGGTAGCAAAGCTCCTTCTGTAAGAAGTTaGACGTACATAGTCAAGTTCTCTTGCTTTGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: TCSGSKAPSVRS*TYIVKFSCFVD Trigger: ATCAACAAAGCAAGAGAACTTGACTATGTACGTCCAACTTCTTACAGAAGGAGCTTTGCTACCAGAACAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS-3UTR GCA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCGCCCCAGGGGTGGGTTaGCTGACCAGATCATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VGPRGGLPDQIICCLRKCAPGVG*LTRSSV Trigger: AACAGATGATCTGGTCAGGCAACCCACCCCTGGGGC...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR CCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTCTTGCTGCAGAAAGTaGGCCCCAGGGGTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVASCCRK*APGVGC Trigger: GCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGA...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR CCA 90 bp | CTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGTCTTGCTGCAGAAAGTaGGCCCCAGGGGTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: LQKVGPRGGLPDQIICCLSCCRK*APGVGC Trigger: GCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGA...CAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | CTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGCAGGGGTGGGTTGCCTaGCCAGATCATCTGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQKVGPRGGLPDQIICCLQGWVA*PDHLLP Trigger: AGGCAACAGATGATCTGGTCAGGCAACCCACCCCTG...CAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCACAGGGGTGGGTTGCCTaGCCAGATCATCTGTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSQGWVA*PDHLLP Trigger: AGGCAACAGATGATCTGGTCAGGCAACCCACCCCTG...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR GCA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCAGCCCCAGGGGTGGGTTaGCTGACCAGATCATCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSAPGVG*LTRSSV Trigger: AACAGATGATCTGGTCAGGCAACCCACCCCTGGGGC...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| 3UTR CAA 72 bp | CCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTaGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PILLQKVGPRGG*PDQIICCLRKC Trigger: GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCCGGCTTCCATTTCCTaGGTTTGTGCCAAGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: GIAPILLQKVGPRGGLPDPASIS*VCAKDW Trigger: CCAGTCCTTGGCACAAACTCAGGAAATGGAAGCCGG...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | TTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGACCGGCTTCCATTTCCTaGGTTTGTGCCAAGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LLPSCCRKWAPGVGCLTRPASIS*VCAKDW Trigger: CCAGTCCTTGGCACAAACTCAGGAAATGGAAGCCGG...TCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR GCA 90 bp | TCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCATCACTGTCCCAGAGGGAACAGATGCTaGGATCCGGCTGGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPANTRQQLALGPTHHCPRGNRC*DPAGQR Trigger: CCTCTGTCCAGCCGGATCGCAGCATCTGTTCCCTCT...GGGACAGTGATGGGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS-3UTR GCA 90 bp | GGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCACTTCTAGAGGGAACAGATaGTGCGATCCGGCTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GPRGGLPDQIICCLRKCTSRGNR*CDPAGQ Trigger: CTGTCCAGCCGGATCGCAGCATCTGTTCCCTCTAGA...AGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR GCA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCGAATTGCTCCCATCTTaGTGCAGAAAGTGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VGPRGGLPDQIICCLRKCELLPS*CRKWAP Trigger: TGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTC...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR GCA 90 bp | CAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGGAATTGCTCCCATCTTaGTGCAGAAAGTGGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: QKVGPRGGLPDQIICCLRELLPS*CRKWAP Trigger: TGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTC...CCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCAAACCAGTGCCAGGCTaGCAATCAGCACAATTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGPRGGLPDQIICCLRKCKPVPG*QSAQLA Trigger: TGCTAATTGTGCTGATTGTCAGCCTGGCACTGGTTT...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
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| CDS-3UTR TCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACGTTCTCTTGCTTTGTTaGTTCTCCTCCCTGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: GIAPILLQKVGPRGGLPDVLLLC*FSSLLA Trigger: GGCTAGCAGGGAGGAGAATCAACAAAGCAAGAGAAC...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS-3UTR TCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GIAPILLQKVGPRGGLPDEATVS*HHLSST Trigger: AGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTC...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCTGTTCAGAGTCCAGTTaGTTGAGTTGGTTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPRGGLPDQIICCLRKCCSESS*LSWLSR Trigger: GCGACTCAACCAACTCAACCAACTGGACTCTGAACA...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACAGCTTTCCATCTTCCTaGATGCCACAAGAACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIAPILLQKVGPRGGLPDSFPSS*MPQEPV Trigger: CACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCT...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACAAACCAGTGCCAGGCTaGCAATCAGCACAATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIAPILLQKVGPRGGLPDKPVPG*QSAQLA Trigger: TGCTAATTGTGCTGATTGTCAGCCTGGCACTGGTTT...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | GGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCACTAGATCATCTGTTGCCTaGGGAAGTGCACTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPRGGLPDQIICCLRKCTRSSVA*GSALSQ Trigger: CTGAGAAAGTGCACTTCCTCAGGCAACAGATGATCT...AGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | ATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGCACTTGCCTTGGAATTaGTCCCATCTTGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IAPILLQKVGPRGGLPDQHLPWN*SHLAAE Trigger: TTCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTG...CTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCATTCCCATACCCACTTaGCTTGGAATTGCTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAIPIPT*LGIAPI Trigger: GATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAAT...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CCA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATGTTCAGAGTCCAGTTaGTTGAGTTGGTTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSCSESS*LSWLSR Trigger: GCGACTCAACCAACTCAACCAACTGGACTCTGAACA...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CCA 90 bp | ATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGCATACCCACTTGCCTTaGAATTGCTCCCATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IAPILLQKVGPRGGLPDQHTHLP*NCSHLA Trigger: AGCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATG...CTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCACCCATCACTGTCCCTaGGGAAATAGAGTCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVATHHCP*GNRVKV Trigger: GACTTTGACTCTATTTCCCCAGGGACAGTGATGGGT...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CCA 90 bp | GGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCACTTGTCCCGTCCTTATCTaGCTGAAGCAACTGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPRGGLPDQIICCLRKCTCPVLI*LKQLLA Trigger: AGCTAACAGTTGCTTCAGCCAGATAAGGACGGGACA...AGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTGTGTCCTGGGAAGAATaGGTCATTGTCCCGTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILLQKVGPRGGLPDQIICVSWEE*VIVPSL Trigger: TAAGGACGGGACAATGACTCATTCTTCCCAGGACAC...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAFHLPE*HKNQCP Trigger: AGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAA...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKVGPRGGLPDQIICCLRFHLPE*HKNQCP Trigger: AGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAA...CCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | ATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGTGTTGCCTGAGGAAGTaGACTTTCTCAGTTCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IAPILLQKVGPRGGLPDQCCLRK*TFSVPN Trigger: GTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACA...CTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | TCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCATCACTGTCCCCACTTGCCTTGGAATTaGTCCCATCTTGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPANTRQQLALGPTHHCPHLPWN*SHLAAE Trigger: TTCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTG...GGGACAGTGATGGGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCGCCCCACATAACTACTaGTCATGTTTTCACCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAAPHNY*SCFHQQ Trigger: TTGCTGGTGAAAACATGAGCAGTAGTTATGTGGGGC...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCCCAGCACTCCTGCCATaGTATGCTTCCATATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGPRGGLPDQIICCLRKCPALLP*YASIYK Trigger: TTTATATATGGAAGCATACCATGGCAGGAGTGCTGG...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTAGCTTTCCATCTTCCTaGATGCCACAAGAACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLQKVGPRGGLPDQIICSFPSS*MPQEPV Trigger: CACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCT...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGCAAAGTCTAATCACCTaGGCAGAATCCCTCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVGPRGGLPDQIICCLQSLIT*AESLLL Trigger: CAATAAGAGGGATTCTGCTCAGGTGATTAGACTTTG...CAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | CTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGTCACCCCTTTTTAGTTaGTATTCCCATACCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQKVGPRGGLPDQIICCLSPLFS*YSHTHL Trigger: CAAGTGGGTATGGGAATAGCAACTAAAAAGGGGTGA...CAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR TCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCCATTGTCCAAAAATGTaGGCTTTGACTGCTAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAHCPKM*ALTARL Trigger: TAACCTAGCAGTCAAAGCTCACATTTTTGGACAATG...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCTTAGGCTTTCCCTTTTaGCTCTCAGCCCCACATAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLMFSPANTRQQLALGPTLGFPF*LSAPHN Trigger: GTTATGTGGGGCTGAGAGTCAAAAGGGAAAGCCTAA...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCCAAGGTGTTAGCAGGTaGTTTCAGAAAATCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAQGVSR*FQKIIP Trigger: AGGAATGATTTTCTGAAAGCACCTGCTAACACCTTG...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGTTGCCTGAGGAAGTaGACTTTCTCAGTTCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLQKVGPRGGLPDQIICCCLRK*TFSVPN Trigger: GTTAGGAACTGAGAAAGTGCACTTCCTCAGGCAACA...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCATACCCACTTGCCTTaGAATTGCTCCCATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLMFSPANTRQQLALGPTHTHLP*NCSHLA Trigger: AGCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATG...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTAACAGGAACAGATGCTaGGATCCGGCTGGACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFHFLSLCQGLGFCPLELNRNRC*DPAGQR Trigger: CCTCTGTCCAGCCGGATCGCAGCATCTGTTCCTGTT...AAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR TCA 90 bp | CCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGCCGGCTTCCATTTCCTaGGTTTGTGCCAAGGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEFVPRTGILSSRASSLLPASIS*VCAKDW Trigger: CCAGTCCTTGGCACAAACTCAGGAAATGGAAGCCGG...CAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTCAAGGTGTTAGCAGGTaGTTTCAGAAAATCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLQKVGPRGGLPDQIICQGVSR*FQKIIP Trigger: AGGAATGATTTTCTGAAAGCACCTGCTAACACCTTG...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTAACAGGAACAGATaGTGCGATCCGGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFHFLSLCQGLGFCPLELLNRNR*CDPAGQ Trigger: CTGTCCAGCCGGATCGCAGCATCTGTTCCTGTTAAG...AAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCACTTCATTGACACAGTaGACTTGTTCTGGTAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLMFSPANTRQQLALGPTTSLTQ*TCSGSK Trigger: TTTGCTACCAGAACAAGTTCACTGTGTCAATGAAGT...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCTGTCATGAACTTCATTaGCACAGTGAACTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLMFSPANTRQQLALGPTCHELH*HSELVL Trigger: CAGAACAAGTTCACTGTGTCAATGAAGTTCATGACA...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR TCA 90 bp | GGCTTCCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GFHFLSLCQGLGFCPLELEATVS*HHLSST Trigger: AGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTC...AAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | GTACACTCCCAGGAAAGTAAAAAGCTCAAGGTGTTAGCAGGTGCTTTCAGAAAATCTAGAGGGAACAGATaGTGCGATCCGGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VHSQESKKLKVLAGAFRKSRGNR*CDPAGQ Trigger: CTGTCCAGCCGGATCGCAGCATCTGTTCCCTCTAGA...TTTTCTGAAAGCACCTGCTAACACCTTGAGCTTTTTACTTTCCTGGGAGTGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGGAAACCAGTGCCAGGCTaGCAATCAGCACAATTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLCQGLGFCPLELLLYWKPVPG*QSAQLA Trigger: TGCTAATTGTGCTGATTGTCAGCCTGGCACTGGTTT...CCAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | CCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPEFVPRTGILSSRASSFHLPE*HKNQCP Trigger: AGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAA...AGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGGGAAATAGAGTCAAAGTCTAATCACCTGAGCAGAATCCCTCTTATTATTCCCATACCCACTTaGCTTGGAATTGCTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VPGEIESKSNHLSRIPLIIPIPT*LGIAPI Trigger: GATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAAT...AATAAGAGGGATTCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGGTATTCAAGCTTTCCATCTTCCTaGATGCCACAAGAACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCQGLGFCPLELLLYWYSSFPSS*MPQEPV Trigger: CACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCT...TGAATACCAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGGGAAATAGAGTCAAAGTCTAATCACCTGAGCAGAATCCCTCTTATTCCATTAAAGTTGAAGTaGCCTACCATAAAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPGEIESKSNHLSRIPLIPLKLK*PTIKGG Trigger: GCCCCCTTTTATGGTAGGGCACTTCAACTTTAATGG...AATAAGAGGGATTCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CCA 90 bp | CCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGCCAGCACTCCTGCCATaGTATGCTTCCATATATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PEFVPRTGILSSRASSLLPALLP*YASIYK Trigger: TTTATATATGGAAGCATACCATGGCAGGAGTGCTGG...CAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR TCA 90 bp | TTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGGTATTCAGATTTCCCGATAGACTaGAAACTCCTTAGAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCQGLGFCPLELLLYWYSDFPID*KLLRVG Trigger: CCCTACTCTAAGGAGTTTTCAGTCTATCGGGAAATC...TGAATACCAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATGTGTCCTGGGAAGAATaGGTCATTGTCCCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRVQLVELVESLYDHVIDVSWEE*VIVPVF Trigger: AAAGACAGGGACAATGACTCATTCTTCCCAGGACAC...ATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTCTCTTTGTTCAGAGTCCAGTTaGTTGAGTTGGTTGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VQLVELVESLYDHVIDSLCSESS*LSWLSR Trigger: GCGACTCAACCAACTCAACCAACTGGACTCTGAACA...AAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGAACACCGTCCTTATCTaGCTGAAGCAACTGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSESSWLSWLSRFTIMLLNTVLI*LKQLLA Trigger: AGCTAACAGTTGCTTCAGCCAGATAAGGACGGTGTT...CAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGGGAAATAGAGTCAAAGTCTAATCACCTGAGCAGAATCCCTCTTATTATAGTCAAGTTCTCTTaGTTTGTTGATTCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPGEIESKSNHLSRIPLIIVKFS*FVDSPP Trigger: GGGAGGAGAATCAACAAAGCAAGAGAACTTGACTAT...AATAAGAGGGATTCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTTCTTCAGCATACGGGTaGTCCTATGAGACCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVLLSLLELMQVPNILTSSAYG*SYETHK Trigger: CTTATGGGTCTCATAGGAGCACCCGTATGCTGAAGA...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR GCA 90 bp | TTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGGTATTCAATCCTATTCTTCAAATaGCCAGTGCCAGGTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCQGLGFCPLELLLYWYSILFFK*PVPGLE Trigger: TTCTAAACCTGGCACTGGGCATTTGAAGAATAGGAT...TGAATACCAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CCA 90 bp | GTACACTCCCAGGAAAGTAAAAAGCTCAAGGTGTTAGCAGGTGCTTTCAGAAAACCTTCTGTAAGAAGTTaGACGTACATAGTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSQESKKLKVLAGAFRKPSVRS*TYIVKF Trigger: GAACTTGACTATGTACGTCCAACTTCTTACAGAAGG...TTTTCTGAAAGCACCTGCTAACACCTTGAGCTTTTTACTTTCCTGGGAGTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CCA 90 bp | CCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGTCCTTTTGCCTTTGCTaGATTCTTTACATTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: PEFVPRTGILSSRASSLLSFCLC*ILYILL Trigger: TAGAAGAATGTAAAGAATCCAGCAAAGGCAAAAGGA...CAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR TCA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTCAAAAATGTGAGCTTTaGCTGCTAGGTTACCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCVLLSLLELMQVPNILTQKCEL*LLGYQK Trigger: TTTCTGGTAACCTAGCAGTCAAAGCTCACATTTTTG...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| 3UTR CAA 72 bp | ATTCCTTTAGTTTTGTTCAGAGTCCAGTTGGTTGAGTaGGTTGAGTCGCTTTACGATCATGTTATTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPLVLFRVQLVE*VESLYDHVIDS Trigger: AGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAACAAAACTAAAGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| 3UTR CAA 72 bp | TGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATaGATTCTCTTAAGATCATCTATGTCTTTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLSWLSRFTIML*ILLRSSMSFPS Trigger: TGAAGGAAAAGACATAGATGATCTTAAGAGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCGGCCCCAGGGGTGGGTaGCCTGACCAGATCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGPRGGLPDQIICCLRKCGPRGG*PDQIIC Trigger: ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCGGAATTGCTCCCATCTaGCTGCAGAAAGTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGPRGGLPDQIICCLRKCGIAPI*LQKVGP Trigger: GGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTGGCCCCAGGGGTGGGTaGCCTGACCAGATCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQKVGPRGGLPDQIICGPRGG*PDQIIC Trigger: ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGAGGAATTGCTCCCATCTaGCTGCAGAAAGTGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSCCRKWAPGVGCLTRGIAPI*LQKVGP Trigger: GGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC...TCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCACCACTTGCCTTGGAATaGCTCCCATCTTGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSPLALE*LPSCCR Trigger: TCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTGG...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCCATACCCACTTGCCTaGGAATTGCTCCCATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIAPILLQKVGPRGGLPDPYPLA*ELLPSC Trigger: GCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATGG...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | TTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGACCAAGGACTGGGATTTaGTCCTCTAGAGGGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLPSCCRKWAPGVGCLTRPRTGI*SSRGNR Trigger: TCTGTTCCCTCTAGAGGACAAAATCCCAGTCCTTGG...TCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | ATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGGGGAAGAATGAGTCATaGTCCCGTCCTTATCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IAPILLQKVGPRGGLPDQGKNES*SRPYLA Trigger: AGCCAGATAAGGACGGGACAATGACTCATTCTTCCC...CTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCTCTGTAGTTCTCTCTTaGCCTTTCTTCAGCATACGG | + |
|
Preference number: 5 (lower is better) Translates to: VGPRGGLPDQIICCLRKCSVVLS*PFFSIR Trigger: CCGTATGCTGAAGAAAGGCAAAGAGAGAACTACAGA...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCAGTTGGTTGAGTTGGTaGAGTCGCTTTACGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGPRGGLPDQIICCLRKCSWLSW*SRFTIM Trigger: CATGATCGTAAAGCGACTCAACCAACTCAACCAACT...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCACTGTCCAGTTGGTTGAGTaGGTTGAGTCGCTTTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: GPRGGLPDQIICCLRKCTVQLVE*VESLYD Trigger: ATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC...AGTGCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACTCAGAGTCCAGTTGGTaGAGTTGGTTGAGTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GIAPILLQKVGPRGGLPDSESSW*SWLSRF Trigger: AAAGCGACTCAACCAACTCAACCAACTGGACTCTGA...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATATTCCCATACCCACTaGCCTTGGAATTGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSYSHTH*PWNCSH Trigger: ATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAATA...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | GGAATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACTATTCCCATACCCACTaGCCTTGGAATTGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GIAPILLQKVGPRGGLPDYSHTH*PWNCSH Trigger: ATGGGAGCAATTCCAAGGCAAGTGGGTATGGGAATA...GTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTCCAAGGACTGGGATTTaGTCCTCTAGAGGGAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ILLQKVGPRGGLPDQIICPRTGI*SSRGNR Trigger: TCTGTTCCCTCTAGAGGACAAAATCCCAGTCCTTGG...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | CTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATTCCATTTCCTGAGTTaGTGCCAAGGACTGGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPSCCRKWAPGVGCLTRSFHFLS*CQGLGF Trigger: AAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAA...TGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTTCCATTTCCTGAGTTaGTGCCAAGGACTGGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAFHFLS*CQGLGF Trigger: AAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAA...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312849.4 ENST00000439068.6 |
||
| CDS-3UTR CAA 90 bp | CTGCTCATGTTTTCACCAGCAAACACCAGACAGCAACTAGCTCTGGGGCCCACCCCACTTGCCTTGGAATaGCTCCCATCTTGCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLMFSPANTRQQLALGPTPLALE*LPSCCR Trigger: TCTGCAGCAAGATGGGAGCAATTCCAAGGCAAGTGG...GGTGGGCCCCAGAGCTAGTTGCTGTCTGGTGTTTGCTGGTGAAAACATGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCTGAGGAAGTGCTGTGTCTTACTTTCATaGCTGGAACTAATGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGPRGGLPDQIICCLRKCCVLLS*LELMQV Trigger: AACCTGCATTAGTTCCAGCAATGAAAGTAAGACACA...GCACTTCCTCAGGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTGCCCCCAGGATGAAACTGTaGGTCTATATTGTGTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: CCRKWAPGVGCLTRSSVAPRMKL*VYIVSI Trigger: AATTGACACAATATAGACCAACAGTTTCATCCTGGG...GGCAACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | ATTGCTCCCATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGGGGAAGAATGAGTCATaGTCCAAAAATGTGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IAPILLQKVGPRGGLPDQGKNES*SKNVSF Trigger: AAAGCTCACATTTTTGGACAATGACTCATTCTTCCC...CTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGATGGGAGCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTGCAGAATCCCTCTTATaGAAAAGAGTAATCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILLQKVGPRGGLPDQIICAESLL*KRVITW Trigger: CCAGGTGATTACTCTTTTCAATAAGAGGGATTCTGC...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | ATCTTGCTGCAGAAAGTGGGCCCCAGGGGTGGGTTGCCTGACCAGATCATCTGTTCCTTCTGTAAGAAGTaGGACGTACATAGTCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQKVGPRGGLPDQIICSFCKK*DVHSQV Trigger: AACTTGACTATGTACGTCCAACTTCTTACAGAAGGA...ACAGATGATCTGGTCAGGCAACCCACCCCTGGGGCCCACTTTCTGCAGCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | CTGAGACAAGTTCACCCCTTTTTAGTTGCTATTCCCATACCCACTTGCCTTGGACCATACCCACTTGCCTaGGAATTGCTCCCATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRQVHPFLVAIPIPTCLGPYPLA*ELLPSC Trigger: GCAAGATGGGAGCAATTCCAAGGCAAGTGGGTATGG...TCCAAGGCAAGTGGGTATGGGAATAGCAACTAAAAAGGGGTGAACTTGTCTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS TCA 90 bp | AATGAGTCATTGTCCCGTCCTTATCTGGCTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: NESLSRPYLAEATVS*HHLSSTPAMVCFHI Trigger: TATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGGACAATGACTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS TCA 90 bp | GTTAAGATGGAACACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACTCCTGCCATGGTATGCTTCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: VKMEHRPYLAEATVS*HHLSSTPAMVCFHI Trigger: TATATGGAAGCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTGTTCCATCTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS CCA 90 bp | AACCCAGGAGTAAAACAGAGCTGGTTGTGGGATACCTATGCTGGGTaGAAGACTCAATTGAATGCTCTGGGATATTTCCCTGGAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: NPGVKQSWLWDTYAG*KTQLNALGYFPGNF Trigger: GAAGTTTCCAGGGAAATATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
||
| CDS CCA 90 bp | ATTACCCTTTCCCAAAGTAACCCAGGAGTAAAACAGAGCTGGTTGTaGGATACCTATGCTGGGTGGAAGACTCAATTGAATGCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITLSQSNPGVKQSWL*DTYAGWKTQLNALG Trigger: TCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTTACTTTGGGAAAGGGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
||
| CDS-3UTR CAA 90 bp | CCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGGTCCAGTTGGTTGAGTaGGTTGAGTCGCTTTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: PEFVPRTGILSSRASSLLVQLVE*VESLYD Trigger: ATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC...CAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CAA 90 bp | CCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCCAAGGACTGGGATTTaGTCCTCTAGAGCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPEFVPRTGILSSRASSPRTGI*SSRASS Trigger: AGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGG...AGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGGGGAAATAGAGTCAAAGTCTAATCACCTGAGCAGAATCCCTCTTATTGTCCAGTTGGTTGAGTaGGTTGAGTCGCTTTACGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPGEIESKSNHLSRIPLIVQLVE*VESLYD Trigger: ATCGTAAAGCGACTCAACCAACTCAACCAACTGGAC...AATAAGAGGGATTCTGCTCAGGTGATTAGACTTTGACTCTATTTCCCCAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS-3UTR CAA 90 bp | CCATTTCCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTGGGAAGAATGAGTCATaGTCCCTGTCTTTCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFPEFVPRTGILSSRASSGKNES*SLSFLL Trigger: CAAAAGGAAAGACAGGGACAATGACTCATTCTTCCC...AGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGGAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS GCA 90 bp | AGTCATTTATGGAATCCACCACATAAAGCTTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCTGGGAAGAATGAGTCATTGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLWNPPHKAFHLPE*HKNQCPGKNESLSR Trigger: ACGGGACAATGACTCATTCTTCCCAGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCTTTATGTGGTGGATTCCATAAATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439068.6 |
||
| CDS GCA 90 bp | AGTCATTTATGGAATCCACCACATAAAGCTTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCTGGGAAGAATGAGTCATTGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHLWNPPHKAFHLPE*HKNQCPGKNESLSL Trigger: CAGGGACAATGACTCATTCTTCCCAGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCTTTATGTGGTGGATTCCATAAATGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
||
| CDS CCA 90 bp | GCTGCGATCCGGCTGGACAGAGGTTTAGTTTGTTTAAGTCATTTATaGAATCCACCACATAAAGCTTTCCATCTTCCTGAATGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: AAIRLDRGLVCLSHL*NPPHKAFHLPECHK Trigger: CTTGTGGCATTCAGGAAGATGGAAAGCTTTATGTGGTGGATTCCATAAATGACTTAAACAAACTAAACCTCTGTCCAGCCGGATCGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000312849.4 ENST00000439068.6 ENST00000455302.5 |
||
| CDS CCA 90 bp | AGTTCTATTACCCTTTCCCAAAGTAACCCAGGAGTAAAACAGAGCTaGTTGTGGGATACCTATGCTGGGTGGAAGACTCAATTGAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSITLSQSNPGVKQS*LWDTYAGWKTQLNA Trigger: AGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTTACTTTGGGAAAGGGTAATAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
||
| CDS-3UTR CAA 90 bp | GGAAAGGCCACAAATCTATCAGATTTCTTCCAAATCAATCAGCAGGGTGCCAAATCAGAGTCCAGTTGGTaGAGTTGGTTGAGTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GKATNLSDFFQINQQGAKSESSW*SWLSRF Trigger: AAAGCGACTCAACCAACTCAACCAACTGGACTCTGA...TTTGGCACCCTGCTGATTGATTTGGAAGAAATCTGATAGATTTGTGGCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
||
| CDS TCA 90 bp | ACGAATCCTATTCTTCAAATGCCCAGTGCCAGGTTTAGAAGTTGGTaGCTTATGTTAAGATGGAACACCGTCCTTATCTGGCTGAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TNPILQMPSARFRSW*LMLRWNTVLIWLKQ Trigger: TTGCTTCAGCCAGATAAGGACGGTGTTCCATCTTAACATAAGTCACCAACTTCTAAACCTGGCACTGGGCATTTGAAGAATAGGATTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTCAGAGTCCAGTTGGTaGAGTTGGTTGAGTCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FRVQLVELVESLYDHVIDSESSW*SWLSRF Trigger: AAAGCGACTCAACCAACTCAACCAACTGGACTCTGA...ATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS-3UTR CAA 90 bp | GTACACTCCCAGGAAAGTAAAAAGCTCAAGGTGTTAGCAGGTGCTTTCAGAAAATCAAGTTCTCTTGCTTaGTTGATTCTCCTCCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VHSQESKKLKVLAGAFRKSSSLA*LILLPA Trigger: AGCAGGGAGGAGAATCAACAAAGCAAGAGAACTTGA...TTTTCTGAAAGCACCTGCTAACACCTTGAGCTTTTTACTTTCCTGGGAGTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS GCA 90 bp | AGTCATTTATGGAATCCACCACATAAAGCTTTCCATCTTCCTGAATaGCACAAGAACCAGTGTCCTGGGAAGAATGAGTCATTGTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: SHLWNPPHKAFHLPE*HKNQCPGKNESLSK Trigger: TTTGGACAATGACTCATTCTTCCCAGGACACTGGTTCTTGTGGCATTCAGGAAGATGGAAAGCTTTATGTGGTGGATTCCATAAATGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTTCCATTTCCTGAGTTaGTGCCAAGGACTGGGATTT | + |
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Preference number: 5 (lower is better) Translates to: FRVQLVELVESLYDHVIDFHFLS*CQGLGF Trigger: AAATCCCAGTCCTTGGCACAAACTCAGGAAATGGAA...ATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS-3UTR CAA 90 bp | TTCAGAGTCCAGTTGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATAGTTGGTTGAGTTGGTaGAGTCGCTTTACGATCATG | + |
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Preference number: 5 (lower is better) Translates to: FRVQLVELVESLYDHVIDSWLSW*SRFTIM Trigger: CATGATCGTAAAGCGACTCAACCAACTCAACCAACT...ATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS-3UTR CAA 90 bp | GTACACTCCCAGGAAAGTAAAAAGCTCAAGGTGTTAGCAGGTGCTTTCAGAAAATTATGTGAGCTCCTCTaGAGTAGAGTGATTTGCACA | + |
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Preference number: 5 (lower is better) Translates to: VHSQESKKLKVLAGAFRKLCELL*SRVICT Trigger: TGTGCAAATCACTCTACTCAAGAGGAGCTCACATAA...TTTTCTGAAAGCACCTGCTAACACCTTGAGCTTTTTACTTTCCTGGGAGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS-3UTR CAA 90 bp | CCTGAGTTTGTGCCAAGGACTGGGATTTTGTCCTCTAGAGCTTCTTCTCTATTGTCTTTGGAAAGTTCTTaGAAGACTGTCTTAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: PEFVPRTGILSSRASSLLSLESS*KTVLTG Trigger: TCCTGTTAAGACAGTCTTCAAAGAACTTTCCAAAGA...CAATAGAGAAGAAGCTCTAGAGGACAAAATCCCAGTCCTTGGCACAAACTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS-3UTR CAA 90 bp | CTGTGTGTCTTACTTTCATTGCTGGAACTAATGCAGGTTCCAAATATTCTAACTCCCACCCCATTAAAGTaGAAGTGCCCTACCATAAAA | + |
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Preference number: 5 (lower is better) Translates to: LCVLLSLLELMQVPNILTPTPLK*KCPTIK Trigger: TTTTATGGTAGGGCACTTCAACTTTAATGGGGTGGG...AGTTAGAATATTTGGAACCTGCATTAGTTCCAGCAATGAAAGTAAGACACACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312849.4 |
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| CDS TCA 72 bp | TTGTCCCGTCCTTATCTGGCTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACTCCTGCCATGGTATGC | + |
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Preference number: 6 (lower is better) Translates to: LSRPYLAEATVS*HHLSSTPAMVC Trigger: GCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439068.6 |
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| CDS TCA 72 bp | GAACACCGTCCTTATCTGGCTGAAGCAACTGTTAGCTaGCACCACCTTTCCAGCACTCCTGCCATGGTATGC | + |
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Preference number: 6 (lower is better) Translates to: EHRPYLAEATVS*HHLSSTPAMVC Trigger: GCATACCATGGCAGGAGTGCTGGAAAGGTGGTGTCAGCTAACAGTTGCTTCAGCCAGATAAGGACGGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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| CDS GCA 72 bp | CCCAGGAGTAAAACAGAGCTGGTTGTGGGATACCTATaGTGGGTGGAAGACTCAATTGAATGCTCTGGGATA | + |
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Preference number: 6 (lower is better) Translates to: PRSKTELVVGYL*WVEDSIECSGI Trigger: TATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CCA 72 bp | ACCCTTTCCCAAAGTAACCCAGGAGTAAAACAGAGCTaGTTGTGGGATACCTATGCTGGGTGGAAGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: TLSQSNPGVKQS*LWDTYAGWKTQ Trigger: TTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTTACTTTGGGAAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CAA 90 bp | TCTATTACCCTTTCCCAAAGTAACCCAGGAGTAAAACAGAGCTGGTaGTGGGATACCTATGCTGGGTGGAAGACTCAATTGAATGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SITLSQSNPGVKQSW*WDTYAGWKTQLNAL Trigger: CAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTTACTTTGGGAAAGGGTAATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CCA 72 bp | GTAAAACAGAGCTGGTTGTGGGATACCTATGCTGGGTaGAAGACTCAATTGAATGCTCTGGGATATTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VKQSWLWDTYAG*KTQLNALGYFP Trigger: AGGGAAATATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CCA 72 bp | TCCCAAAGTAACCCAGGAGTAAAACAGAGCTGGTTGTaGGATACCTATGCTGGGTGGAAGACTCAATTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SQSNPGVKQSWL*DTYAGWKTQLN Trigger: ATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCTGGGTTACTTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS TCA 72 bp | GGTTGTGGGATACCTATGCTGGGTGGAAGACTCAATTaGATGCTCTGGGATATTTCCCTGGAAACTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GCGIPMLGGRLN*MLWDISLETSF Trigger: AAAAGAAGTTTCCAGGGAAATATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CCA 72 bp | AGGAGTAAAACAGAGCTGGTTGTGGGATACCTATGCTaGGTGGAAGACTCAATTGAATGCTCTGGGATATTT | + |
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Preference number: 6 (lower is better) Translates to: RSKTELVVGYLC*VEDSIECSGIF Trigger: AAATATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCACAACCAGCTCTGTTTTACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS GCA 72 bp | GTGGGATACCTATGCTGGGTGGAAGACTCAATTGAATaGTCTGGGATATTTCCCTGGAAACTTCTTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: VGYLCWVEDSIE*SGIFPWKLLLL Trigger: TAATAAAAGAAGTTTCCAGGGAAATATCCCAGAGCATTCAATTGAGTCTTCCACCCAGCATAGGTATCCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486022.1 |
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| CDS CAA 90 bp | AGGTGCTTTCAGAAAATCATTCCTTTAGTTTTGTTCAGAGTCCAGTaGGTTGAGTTGGTTGAGTCGCTTTACGATCATGTTATTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: RCFQKIIPLVLFRVQ*VELVESLYDHVIDS Trigger: AGAATCAATAACATGATCGTAAAGCGACTCAACCAACTCAACCAACTGGACTCTGAACAAAACTAAAGGAATGATTTTCTGAAAGCACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000312849.4 ENST00000439068.6 ENST00000471030.1 |
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| CDS TCA 72 bp | CATCTATTTGCTTACATCTTTGATTTCCCGATAGACTaGAAACTCCTTAGAGTAGGGACGAATCCTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: HLFAYIFDFPID*KLLRVGTNPIL Trigger: AAGAATAGGATTCGTCCCTACTCTAAGGAGTTTTCAGTCTATCGGGAAATCAAAGATGTAAGCAAATAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000455302.5 |
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