RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LSM8 (Homo sapiens)

Ensembl gene IDs: ENSG00000128534

Ensembl transcript IDs: ENST00000249299.7, ENST00000411938.1, ENST00000422760.1, ENST00000424702.1

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCACAGACAGCACCTAGTTCAGCAACGGTGTTTACCAACACATaGAAAGTATTGCTAATAAGCTCTCTTGAGCCTTGGTGTTCAGGG +
Preference number: 1 (lower is better)
Translates to: AAQTAPSSATVFTNT*KVLLISSLEPWCSG
Trigger: CCCTGAACACCAAGGCTCAAGAGAGCTTATTAGCAATACTTTGCATGTGTTGGTAAACACCGTTGCTGAACTAGGTGCTGTCTGTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 90 bp TATGCACAGCTCCAATATAAACAGTGTTGTTCTGATCCAGAGACCTaGGCCCTATCTGCTCTGTCTCTCTCTCATTACTTACAGCTCACC +
Preference number: 1 (lower is better)
Translates to: YAQLQYKQCCSDPET*ALSALSLSHYLQLT
Trigger: GGTGAGCTGTAAGTAATGAGAGAGAGACAGAGCAGATAGGGCCCAGGTCTCTGGATCAGAACAACACTGTTTATATTGGAGCTGTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR TCA 90 bp AAATCCCTCACCTTCCTAGCCTCCCTTGTAGTTAGGGTAACCATATaGCAAAGATCTGGCCAATGGCATTCAAGCAGTATATTTTGCCAG +
Preference number: 1 (lower is better)
Translates to: KSLTFLASLVVRVTI*QRSGQWHSSSIFCQ
Trigger: CTGGCAAAATATACTGCTTGAATGCCATTGGCCAGATCTTTGTCATATGGTTACCCTAACTACAAGGGAGGCTAGGAAGGTGAGGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp ATGCTGTGTAGGGCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTaGATCATTAATAGTCTTCAAATTCAGCAAGTTCTGCCTCTAGAG +
Preference number: 1 (lower is better)
Translates to: MLCRAERFFTCTSES*IINSLQIQQVLPLE
Trigger: CTCTAGAGGCAGAACTTGCTGAATTTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGCCCTACACAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 90 bp TTTCCTGAGTTGGTATCAACTAGGAGACTCTCTCTACATGCTCCATaGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTTCTCCT +
Preference number: 1 (lower is better)
Translates to: FPELVSTRRLSLHAP*QLQAHTYLVLRFSP
Trigger: AGGAGAAAATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTCCTAGTTGATACCAACTCAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 90 bp AGTGCTAGGGAGCAACTTTTAGAAGCACTAGCAAACTACCACCAGTaGAATCGGATAAATGCCAATGATTCAGATAACTCCAGCAAAGAT +
Preference number: 1 (lower is better)
Translates to: SAREQLLEALANYHQ*NRINANDSDNSSKD
Trigger: ATCTTTGCTGGAGTTATCTGAATCATTGGCATTTATCCGATTCCACTGGTGGTAGTTTGCTAGTGCTTCTAAAAGTTGCTCCCTAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 90 bp AAATCCTTACTATCCTTAGGGTCAAGCACAAGTCATCCATTTCCATaGAGATTCTCCTCCAATCTCTCCCATATTGCTATGCATAGAGGA +
Preference number: 1 (lower is better)
Translates to: KSLLSLGSSTSHPFP*RFSSNLSHIAMHRG
Trigger: TCCTCTATGCATAGCAATATGGGAGAGATTGGAGGAGAATCTTCATGGAAATGGATGACTTGTGCTTGACCCTAAGGATAGTAAGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 90 bp TGCATGGGGTCACTTAAAGCTATTGACTATATTTTCATTCTCTGTTaGCACTTAGGGAAGGCATTTCCAGATAAATGTCTTCGGTATGGC +
Preference number: 1 (lower is better)
Translates to: CMGSLKAIDYIFILC*HLGKAFPDKCLRYG
Trigger: GCCATACCGAAGACATTTATCTGGAAATGCCTTCCCTAAGTGCCAACAGAGAATGAAAATATAGTCAATAGCTTTAAGTGACCCCATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp ATCTCTCCCATATTGCTATGCATAGAGGAAAATGCATCTTTGCCATaGATGGGAAGCTTTTATATATTGCCTTCAAACACCAGTTTACCG +
Preference number: 1 (lower is better)
Translates to: ISPILLCIEENASLP*MGSFYILPSNTSLP
Trigger: CGGTAAACTGGTGTTTGAAGGCAATATATAAAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp ATCCATTTCCATGAAGATTCTCCTCCAATCTCTCCCATATTGCTATaGATAGAGGAAAATGCATCTTTGCCATGCATGGGAAGCTTTTAT +
Preference number: 1 (lower is better)
Translates to: IHFHEDSPPISPILL*IEENASLPCMGSFY
Trigger: ATAAAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGATTGGAGGAGAATCTTCATGGAAATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 90 bp TTCACAGGGCATTTGTTTATAAAATTTGTGCTGGAAGATTACTTGTaGACTAGGGCCAAACCCTTAATTATGACTAGGGAAACCCAGAAG +
Preference number: 1 (lower is better)
Translates to: FTGHLFIKFVLEDYL*TRAKPLIMTRETQK
Trigger: CTTCTGGGTTTCCCTAGTCATAATTAAGGGTTTGGCCCTAGTTCACAAGTAATCTTCCAGCACAAATTTTATAAACAAATGCCCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp AAGATGAAGGCCCAGAATATACTAACTATATTGTCAGTTAAGAGTTaGCTTACAACCCTGGCTACTAAATTGTCTGGTTCACATGCCATT +
Preference number: 1 (lower is better)
Translates to: KMKAQNILTILSVKS*LTTLATKLSGSHAI
Trigger: AATGGCATGTGAACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAATATAGTTAGTATATTCTGGGCCTTCATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp AGATTCTCCTCCAATCTCTCCCATATTGCTATGCATAGAGGAAAATaGATCTTTGCCATGCATGGGAAGCTTTTATATATTGCCTTCAAA +
Preference number: 1 (lower is better)
Translates to: RFSSNLSHIAMHRGK*IFAMHGKLLYIAFK
Trigger: TTTGAAGGCAATATATAAAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGATTGGAGGAGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp CTCCTTATTACTCAACCACATCTTACTCCTTCTTGCCTTCCTGTCTaGCAATTTGAAGTTTTCCTAACCATCTATGGAAATCCTTACTAT +
Preference number: 1 (lower is better)
Translates to: LLITQPHLTPSCLPV*QFEVFLTIYGNPYY
Trigger: ATAGTAAGGATTTCCATAGATGGTTAGGAAAACTTCAAATTGGCAGACAGGAAGGCAAGAAGGAGTAAGATGTGGTTGAGTAATAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 90 bp TTTAAGTCTTTGGTTACATCTAAGTTCCCAGCACTTAGCAGTGTCTaGCATTTGGTAACTCTCATTGTTGAACAGATTGTTGCAAAGTTA +
Preference number: 1 (lower is better)
Translates to: FKSLVTSKFPALSSV*HLVTLIVEQIVAKL
Trigger: TAACTTTGCAACAATCTGTTCAACAATGAGAGTTACCAAATGCCAGACACTGCTAAGTGCTGGGAACTTAGATGTAACCAAAGACTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 90 bp ACTGCGTTAGATCATCTGAATATTTCTCATCAGGCTTCTGATAGATaGTTGATAGCAGATTTTAAGACTATACTTTCTGATAACAGGCAG +
Preference number: 1 (lower is better)
Translates to: TALDHLNISHQASDR*LIADFKTILSDNRQ
Trigger: CTGCCTGTTATCAGAAAGTATAGTCTTAAAATCTGCTATCAAGCATCTATCAGAAGCCTGATGAGAAATATTCAGATGATCTAACGCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGTTGTCAGTTAAGAGTTaGCTTACAACCCTGGCTACT +
Preference number: 2 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQLSVKS*LTTLAT
Trigger: AGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAA...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTGAAAACGGCCCACAATaGAGGTTTGGGAACTGCGTT +
Preference number: 2 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIENGPQ*RFGNCV
Trigger: AACGCAGTTCCCAAACCTGCATTGTGGGCCGTTTTC...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCTAAATTTGCCTGTTTaGCTTACCCACTTTCCATCA +
Preference number: 2 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQLNLPV*LTHFPS
Trigger: TGATGGAAAGTGGGTAAGGCAAACAGGCAAATTTAG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTGCCTTTCACTGCCATaGTACACTGGACTAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKICLSLP*YTGLAQ
Trigger: TTGGGCTAGTCCAGTGTAGCATGGCAGTGAAAGGCA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTACTCAGCACCAGGCCTaGCACATGATATGCACTCAA +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKITQHQA*HMICTQ
Trigger: TTGAGTGCATATCATGTGCCAGGCCTGGTGCTGAGT...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTAATGTATTGTGTCCCTaGAGTTGTCTCCCCACCCAC +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKINVLCP*SCLPTH
Trigger: GTGGGTGGGGAGACAACTCCAGGGACACAATACATT...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAGAAACCCATTATCATaGGGGACAGGACTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIRNPLS*GTGLVF
Trigger: AAAAACCAGTCCTGTCCCTCATGATAATGGGTTTCT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGAAAACTGTCAGCATGTaGGGCCAAGTTACCAAAGTG +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLKTVSM*GQVTKV
Trigger: CACTTTGGTAACTTGGCCTCACATGCTGACAGTTTT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAAGGACTCAGAAAAGCTaGTATGCTCCCAGTTGCAGA +
Preference number: 2 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSRTQKS*YAPSCR
Trigger: TCTGCAACTGGGAGCATAGCAGCTTTTCTGAGTCCT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAACACTGCACTCCAGCCTaGCGAAAGAGCAAGAAGTGT +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQHCTPA*RKSKKC
Trigger: ACACTTCTTGCTCTTTCGCCAGGCTGGAGTGCAGTG...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp CAGCAAGTTCTGCCTCTAGAGAGCACCAGAGCAGCTACTTATGATTaGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACA +
Preference number: 2 (lower is better)
Translates to: QQVLPLESTRAATYD*FHDSETITPSNGST
Trigger: TGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATAAGTAGCTGCTCTGGTGCTCTCTAGAGGCAGAACTTGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAACTGACCTTAGCTCCTaGATCTCGTTTCCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQTDLSS*ISFPRA
Trigger: AGCTCTGGGAAACGAGATTCAGGAGCTAAGGTCAGT...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAACAGTCCACCATGTaGTTGTATCCAGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIKQSTM*LYPGIK
Trigger: CTTTATTCCTGGATACAAGCACATGGTGGACTGTTT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTGTCCCTCATGGCTACTaGACAATGCTTAGGTTGTTT +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIVPHGY*TMLRLF
Trigger: AAACAACCTAAGCATTGTGCAGTAGCCATGAGGGAC...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGGCAAACTACCACCAGTaGAATCGGATAAATGCCAAT +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLANYHQ*NRINAN
Trigger: ATTGGCATTTATCCGATTCCACTGGTGGTAGTTTGC...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp CAAGTCATCCATTTCCATGAAGATTCTCCTCCAATCTCTCCCATATaGCTATGCATAGAGGAAAATGCATCTTTGCCATGCATGGGAAGC +
Preference number: 2 (lower is better)
Translates to: QVIHFHEDSPPISPI*LCIEENASLPCMGS
Trigger: GCTTCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGATTGGAGGAGAATCTTCATGGAAATGGATGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAAGTCATCCATTTCCATaGAGATTCTCCTCCAATCTC +
Preference number: 2 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSSHPFP*RFSSNL
Trigger: GAGATTGGAGGAGAATCTTCATGGAAATGGATGACT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATCTTCCAGGAACTGGTaGAGGACAGGTCCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQSSRNW*RTGPFF
Trigger: AAAGAAAGGACCTGTCCTTCACCAGTTCCTGGAAGA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTCTCCCATATTGCTATaGATAGAGGAAAATGCATCT +
Preference number: 2 (lower is better)
Translates to: ETLSTCSMAAPGSHILSISPILL*IEENAS
Trigger: AGATGCATTTTCCTCTATGCATAGCAATATGGGAGA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAGTTGCCTTACAACCCTaGCTACTAAATTGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSVALQP*LLNCLV
Trigger: AACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAAC...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGAATATAATGTGCACTTaGATACCTAGTCCCTCATGG +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLNIMCT*IPSPSW
Trigger: CCATGAGGGACTAGGTATCCAAGTGCACATTATATT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp CAGGAACTGGTGAAGGACAGGTCCTTTCTTTGCAATAAAAAGGATTaGAGCCTTTACTGTACAGAGAGGTCAGTCTACTCCTTATTACTC +
Preference number: 2 (lower is better)
Translates to: QELVKDRSFLCNKKD*SLYCTERSVYSLLL
Trigger: GAGTAATAAGGAGTAGACTGACCTCTCTGTACAGTAAAGGCTCAAATCCTTTTTATTGCAAAGAAAGGACCTGTCCTTCACCAGTTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTCACTATACAGAGGAATaGAGATCACATCAAAGCATC +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIHYTEE*RSHQSI
Trigger: GATGCTTTGATGTGATCTTCATTCCTCTGTATAGTG...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCATCCTGTCTGCCAATTTaGAGTTTTCCTAACCATCTA +
Preference number: 2 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSSCLPI*SFPNHL
Trigger: TAGATGGTTAGGAAAACTTCAAATTGGCAGACAGGA...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCAACCTAGCACAAGTTaGAGTATCACAAATTTCAAG +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLQPSTS*SITNFK
Trigger: CTTGAAATTTGTGATACTTCAACTTGTGCTAGGTTG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCAGGCTTCTGATAGATaGTTGATAGCAGATTTTAAG +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLQASDR*LIADFK
Trigger: CTTAAAATCTGCTATCAAGCATCTATCAGAAGCCTG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTGTGTTTACCAACACATaGAAAGTATTGCTAATAAGC +
Preference number: 2 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIVFTNT*KVLLIS
Trigger: GCTTATTAGCAATACTTTGCATGTGTTGGTAAACAC...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGATTTTCATTCTCTGTTaGCACTTAGGGAAGGCATTT +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLIFILC*HLGKAF
Trigger: AAATGCCTTCCCTAAGTGCCAACAGAGAATGAAAAT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp CCTCCAATCTCTCCCATATTGCTATGCATAGAGGAAAATGCATCTTaGCCATGCATGGGAAGCTTTTATATATTGCCTTCAAACACCAGT +
Preference number: 2 (lower is better)
Translates to: PPISPILLCIEENAS*PCMGSFYILPSNTS
Trigger: ACTGGTGTTTGAAGGCAATATATAAAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGATTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTGTTCAGGGTTTTTATaGGGGTTCAGTCACATAAAT +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKICSGFL*GFSHIN
Trigger: ATTTATGTGACTGAACCCTCATAAAAACCCTGAACA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAACACTTTGACTCTGGTTaGTCCTTTCTGTACTTTCTC +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQHFDSG*SFLYFL
Trigger: GAGAAAGTACAGAAAGGAGCAACCAGAGTCAAAGTG...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGATGGCTACTGCACAATaGTTAGGTTGTTTATATTTG +
Preference number: 2 (lower is better)
Translates to: PASEILASILAQWQHCWLMATAQ*LGCLYL
Trigger: CAAATATAAACAACCTAAGCATTGTGCAGTAGCCAT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTTATGTTACTACTCATaGTTGTGGCTCCCTTACAAT +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKILCYYS*LWLPYN
Trigger: ATTGTAAGGGAGCCACAACCATGAGTAGTAACATAA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp AGCTGTCCTAAATTACTGCCTCCTCTGTGTTTAGGGAGTCTGCTCTaGGTCTTACAAGTCCAAAAGCAGAATATTACAAATTCACATAGA +
Preference number: 2 (lower is better)
Translates to: SCPKLLPPLCLGSLL*VLQVQKQNITNSHR
Trigger: TCTATGTGAATTTGTAATATTCTGCTTTTGGACTTGTAAGACCAAGAGCAGACTCCCTAAACACAGAGGAGGCAGTAATTTAGGACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTCTCTGTTACTGTCATaGAGTAAATACTCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: LSTCSMAAPGSHILSIKISLLLS*SKYSGN
Trigger: ATTTCCTGAGTATTTACTGCATGACAGTAACAGAGA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGGGTCGGAAAGGTATCTaGAAGAACAATTCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: YDLFHDSETITPSNGSTKGRKGI*KNNSQL
Trigger: GAGCTGAGAATTGTTCTTCCAGATACCTTTCCGACC...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp ACTATATTGTCAGTTAAGAGTTGCCTTACAACCCTGGCTACTAAATaGTCTGGTTCACATGCCATTACAAAGGGCCTTTACTTTCTCATT +
Preference number: 2 (lower is better)
Translates to: TILSVKSCLTTLATK*SGSHAITKGLYFLI
Trigger: AATGAGAAAGTAAAGGCCCTTTGTAATGGCATGTGAACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAATATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp TCTTTGGTTACATCTAAGTTCCCAGCACTTAGCAGTGTCTGGCATTaGGTAACTCTCATTGTTGAACAGATTGTTGCAAAGTTACTTGTT +
Preference number: 2 (lower is better)
Translates to: SLVTSKFPALSSVWH*VTLIVEQIVAKLLV
Trigger: AACAAGTAACTTTGCAACAATCTGTTCAACAATGAGAGTTACCAAATGCCAGACACTGCTAAGTGCTGGGAACTTAGATGTAACCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAACTTATAAGGCTGATTTaGGTGAAGATATTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQLIRLI*VKIFSS
Trigger: GGAGGAAAATATCTTCACTCAAATCAGCCTTATAAG...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR TCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAAATTTTAATCGGTTGTaGGAAAACAGTCCACCATGT +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQNFNRL*ENSPPC
Trigger: ACATGGTGGACTGTTTTCTCACAACCGATTAAAATT...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATCATACCTAACCAATTaGGCATCAAGAGACTTTACT +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQSYLTN*ASRDFT
Trigger: AGTAAAGTCTCTTGATGCCCAATTGGTTAGGTATGA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAACATCTTTGCCATGCATaGGAAGCTTTTATATATTGC +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQHLCHA*EAFIYC
Trigger: GCAATATATAAAAGCTTCCCATGCATGGCAAAGATG...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATATTACTCCCTCCAATaGCTCTACAAAGCCAATATA +
Preference number: 2 (lower is better)
Translates to: AERFFTCTSESCIINSLQYYSLQ*LYKANI
Trigger: TATATTGGCTTTGTAGAGCCATTGGAGGGAGTAATA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGTGCAGGTTTGGGAACTaGGTTAGATCATCTGAATAT +
Preference number: 2 (lower is better)
Translates to: YDLFHDSETITPSNGSTKCRFGN*VRSSEY
Trigger: ATATTCAGATGATCTAACGCAGTTCCCAAACCTGCA...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR GCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGGACAGGTCCTTTCTTTaGAATAAAAAGGATTTGAGC +
Preference number: 2 (lower is better)
Translates to: YDLFHDSETITPSNGSTKDRSFL*NKKDLS
Trigger: GCTCAAATCCTTTTTATTGCAAAGAAAGGACCTGTC...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp TACCTACTAATTTTGAAGATGAAGGCCCAGAATATACTAACTATATaGTCAGTTAAGAGTTGCCTTACAACCCTGGCTACTAAATTGTCT +
Preference number: 2 (lower is better)
Translates to: YLLILKMKAQNILTI*SVKSCLTTLATKLS
Trigger: AGACAATTTAGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAATATAGTTAGTATATTCTGGGCCTTCATCTTCAAAATTAGTAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 90 bp GCGTTAGATCATCTGAATATTTCTCATCAGGCTTCTGATAGATGCTaGATAGCAGATTTTAAGACTATACTTTCTGATAACAGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: ALDHLNISHQASDRC*IADFKTILSDNRQY
Trigger: ATACTGCCTGTTATCAGAAAGTATAGTCTTAAAATCTGCTATCAAGCATCTATCAGAAGCCTGATGAGAAATATTCAGATGATCTAACGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp AGAGACAGTGTTTTGCCATGTTGGCGAGGCCGGTCTTaGACTCCTGACCTGATCCACTTGCCTCAGACTCCC +
Preference number: 3 (lower is better)
Translates to: RDSVLPCWRGRS*TPDLIHLPQTP
Trigger: GGGAGTCTGAGGCAAGTGGATCAGGTCAGGAGTTCAAGACCGGCCTCGCCAACATGGCAAAACACTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAGGCAGGGGAATCGCTaGAACCCAGGATGCGGAGGT +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIRQGNR*NPGCGG
Trigger: ACCTCCGCATCCTGGGTTCAAGCGATTCCCCTGCCT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTCATGTCAGTATTTACTaGCTGGGGAGGTGGCCTTAC +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIHVSIY*LGRWPY
Trigger: GTAAGGCCACCTCCCCAGCAAGTAAATACTGACATG...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGGACATTGATGGGAATTaGATACCAGTTGTAGCAATG +
Preference number: 3 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQDIDGN*IPVVAM
Trigger: CATTGCTACAACTGGTATCAAATTCCCATCAATGTC...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGGCTTCTGATAGATGCTaGATAGCAGATTTTAAGACT +
Preference number: 3 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQASDRC*IADFKT
Trigger: AGTCTTAAAATCTGCTATCAAGCATCTATCAGAAGC...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGGGCCTTACCCTACACTaGAATTTCTCAAAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: PASEILASILAQWQHCWLGLTLH*NFSKPV
Trigger: GACAGGCTTTGAGAAATTCAAGTGTAGGGTAAGGCC...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp TACTCCCTCCAATGGCTCTACAAAGCCAATATAATGTaGACTTGGATACCTAGTCCCTCATGGCTACTGCAC +
Preference number: 3 (lower is better)
Translates to: YSLQWLYKANIM*TWIPSPSWLLH
Trigger: GTGCAGTAGCCATGAGGGACTAGGTATCCAAGTGCACATTATATTGGCTTTGTAGAGCCATTGGAGGGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTGTTACTACTCATGGTaGTGGCTCCCTTACAATTCT +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSICYYSW*WLPYNS
Trigger: AGAATTGTAAGGGAGCCACAACCATGAGTAGTAACA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCACCCTGGCTACTAAATaGTCTGGTTCACATGCCATT +
Preference number: 3 (lower is better)
Translates to: STLGNCNENGPQCRFGNCTLATK*SGSHAI
Trigger: AATGGCATGTGAACCAGACAATTTAGTAGCCAGGGT...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAACTTTGCACTAGTATaGAAGGCCATCTCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSINFALV*KAISSL
Trigger: AAGGGAAGAGATGGCCTTCAATACTAGTGCAAAGTT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp GGAGTCACATCTTTAGGCATCGCTGGATCCAGGTGCTaGAATGATGTCATCAGGCCCAAAATGTCTCTTTAT +
Preference number: 3 (lower is better)
Translates to: GVTSLGIAGSRC*NDVIRPKMSLY
Trigger: ATAAAGAGACATTTTGGGCCTGATGACATCATTTCAGCACCTGGATCCAGCGATGCCTAAAGATGTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp CTAGTTTTTAATACAAGACACAATGTATTGTGTCCCTaGAGTTGTCTCCCCACCCACCCTGACTCCTGGATT +
Preference number: 3 (lower is better)
Translates to: LVFNTRHNVLCP*SCLPTHPDSWI
Trigger: AATCCAGGAGTCAGGGTGGGTGGGGAGACAACTCCAGGGACACAATACATTGTGTCTTGTATTAAAAACTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp CTCCAATGGCTCTACAAAGCCAATATAATGTGCACTTaGATACCTAGTCCCTCATGGCTACTGCACAATGCT +
Preference number: 3 (lower is better)
Translates to: LQWLYKANIMCT*IPSPSWLLHNA
Trigger: AGCATTGTGCAGTAGCCATGAGGGACTAGGTATCCAAGTGCACATTATATTGGCTTTGTAGAGCCATTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTTCATACCTAACCAATaGGGCATCAAGAGACTTTAC +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIFIPNQ*GIKRLY
Trigger: GTAAAGTCTCTTGATGCCCAATTGGTTAGGTATGAA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTCCTAAATTTGCCTGTTaGCCTTACCCACTTTCCATC +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIPKFAC*PYPLSI
Trigger: GATGGAAAGTGGGTAAGGCAAACAGGCAAATTTAGG...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTGAGGAAAATGCATCTTaGCCATGCATGGGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIEENAS*PCMGSF
Trigger: AAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTC...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp CACATCTTTAGGCATCGCTGGATCCAGGTGCTGAAATaGTGTCATCAGGCCCAAAATGTCTCTTTATTGCTT +
Preference number: 3 (lower is better)
Translates to: HIFRHRWIQVLK*CHQAQNVSLLL
Trigger: AAGCAATAAAGAGACATTTTGGGCCTGATGACATCATTTCAGCACCTGGATCCAGCGATGCCTAAAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp ACAGCACCTAGTTCAGCAACGGTGTTTACCAACACATaGAAAGTATTGCTAATAAGCTCTCTTGAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: TAPSSATVFTNT*KVLLISSLEPW
Trigger: CCAAGGCTCAAGAGAGCTTATTAGCAATACTTTGCATGTGTTGGTAAACACCGTTGCTGAACTAGGTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp TATCTTCACCATGTCAGTATTTACTTGCTGGGGAGGTaGCCTTACCCTACACTTGAATTTCTCAAAGCCTGT +
Preference number: 3 (lower is better)
Translates to: YLHHVSIYLLGR*PYPTLEFLKAC
Trigger: ACAGGCTTTGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACATGGTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp CTCCAATATAAACAGTGTTGTTCTGATCCAGAGACCTaGGCCCTATCTGCTCTGTCTCTCTCTCATTACTTA +
Preference number: 3 (lower is better)
Translates to: LQYKQCCSDPET*ALSALSLSHYL
Trigger: TAAGTAATGAGAGAGAGACAGAGCAGATAGGGCCCAGGTCTCTGGATCAGAACAACACTGTTTATATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATCACAGTCCCTAAATTaGCCTGTTTGCCTTACCCAC +
Preference number: 3 (lower is better)
Translates to: AERFFTCTSESCIINSLQSQSLN*PVCLTH
Trigger: GTGGGTAAGGCAAACAGGCAAATTTAGGGACTGTGA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTAGTGACTATTCCTTTTaGCTCCATTACACAGCTGCT +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKISDYSF*LHYTAA
Trigger: AGCAGCTGTGTAATGGAGCAAAAAGGAATAGTCACT...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAACACATGCAAAGTATaGCTAATAAGCTCTCTTGAG +
Preference number: 3 (lower is better)
Translates to: ETLSTCSMAAPGSHILSINTCKV*LISSLE
Trigger: CTCAAGAGAGCTTATTAGCAATACTTTGCATGTGTT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTTGTTGCAAAGTTACTaGTTTTCCTTCCATGGCACC +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKILLQSY*FSFHGT
Trigger: GGTGCCATGGAAGGAAAACAAGTAACTTTGCAACAA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp CTATCCTTAGGGTCAAGCACAAGTCATCCATTTCCATaGAGATTCTCCTCCAATCTCTCCCATATTGCTATG +
Preference number: 3 (lower is better)
Translates to: LSLGSSTSHPFP*RFSSNLSHIAM
Trigger: CATAGCAATATGGGAGAGATTGGAGGAGAATCTTCATGGAAATGGATGACTTGTGCTTGACCCTAAGGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp TTCTGTTTGGGCATAGAAGTTGTTTTCACCTGCCTCTaGGATACTTGCTTCTATACTAGCACAATGGCAGCA +
Preference number: 3 (lower is better)
Translates to: FCLGIEVVFTCL*DTCFYTSTMAA
Trigger: TGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGGTGAAAACAACTTCTATGCCCAAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp CATGAAGATTCTCCTCCAATCTCTCCCATATTGCTATaGATAGAGGAAAATGCATCTTTGCCATGCATGGGA +
Preference number: 3 (lower is better)
Translates to: HEDSPPISPILL*IEENASLPCMG
Trigger: TCCCATGCATGGCAAAGATGCATTTTCCTCTATGCATAGCAATATGGGAGAGATTGGAGGAGAATCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCACGGCTGAGGAAAATGTaGACATCGTTATTCTGTATT +
Preference number: 3 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSRLRKM*TSLFCI
Trigger: AATACAGAATAACGATGTCAACATTTTCCTCAGCCG...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAACAAGACACAATGTATaGTGTCCCTGGAGTTGTCTC +
Preference number: 3 (lower is better)
Translates to: AERFFTCTSESCIINSLQTRHNV*CPWSCL
Trigger: GAGACAACTCCAGGGACACAATACATTGTGTCTTGT...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGTGCAATAAAAAGGATTaGAGCCTTTACTGTACAGAG +
Preference number: 3 (lower is better)
Translates to: PASEILASILAQWQHCWLCNKKD*SLYCTE
Trigger: CTCTGTACAGTAAAGGCTCAAATCCTTTTTATTGCA...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCAAAATGTCTCTTTATaGCTTGATTCTGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PASEILASILAQWQHCWLQNVSL*LDSAFL
Trigger: CAGGAAAGCAGAATCAAGCAATAAAGAGACATTTTG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp TCCCAAGGACTCAAGAGATTTTCTTCCAGGAACTGGTaGAGGACAGGTCCTTTCTTTGCAATAAAAAGGATT +
Preference number: 3 (lower is better)
Translates to: SQGLKRFSSRNW*RTGPFFAIKRI
Trigger: AATCCTTTTTATTGCAAAGAAAGGACCTGTCCTTCACCAGTTCCTGGAAGAAAATCTCTTGAGTCCTTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATaGAGGTTTGGGAACTGCGTTAGATCATCTGAATAT +
Preference number: 3 (lower is better)
Translates to: STLGNCNENGPQ*RFGNCVRSSEY
Trigger: ATATTCAGATGATCTAACGCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp GAGCAACTTTTAGAAGCACTAGCAAACTACCACCAGTaGAATCGGATAAATGCCAATGATTCAGATAACTCC +
Preference number: 3 (lower is better)
Translates to: EQLLEALANYHQ*NRINANDSDNS
Trigger: GGAGTTATCTGAATCATTGGCATTTATCCGATTCCACTGGTGGTAGTTTGCTAGTGCTTCTAAAAGTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTCCTTATAAGGCTGATTaGAGTGAAGATATTTTCCTC +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIPYKAD*SEDIFL
Trigger: GAGGAAAATATCTTCACTCAAATCAGCCTTATAAGG...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTAATAAGATCCTGTGTTaGAAATCAATTCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKINKILC*KSILWG
Trigger: ACCCCACAGAATTGATTTCAAACACAGGATCTTATT...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTGCAGCTACTTATGATTaGTTTCATGACTCTGAAACT +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIAATYD*FHDSET
Trigger: AGTTTCAGAGTCATGAAACAAATCATAAGTAGCTGC...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTCGTTCCATTAAAATGTaGATTGCCTTGGGAATAGAT +
Preference number: 3 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIRSIKM*IALGID
Trigger: ATCTATTCCCAAGGCAATCAACATTTTAATGGAACG...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAGGGCCTATACATGAGTaGATCAGAAATTTTATGGAC +
Preference number: 3 (lower is better)
Translates to: AERFFTCTSESCIINSLQGPIHE*IRNFMD
Trigger: GTCCATAAAATTTCTGATCAACTCATGTATAGGCCC...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp ATAAGCTCTCTTGAGCCTTGGTGTTCAGGGTTTTTATaGGGGTTCAGTCACATAAATATTCAGTTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: ISSLEPWCSGFL*GFSHINIQFPH
Trigger: ATGAGGGAACTGAATATTTATGTGACTGAACCCTCATAAAAACCCTGAACACCAAGGCTCAAGAGAGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp CTCTTGAACTTTTATATCTGTCTGTCCCAAGTAAACTaGGGCCACAGGGACATCTTAAGTGTGTCAATGATA +
Preference number: 3 (lower is better)
Translates to: LLNFYICLSQVN*GHRDILSVSMI
Trigger: TATCATTGACACACTTAAGATGTCCCTGTGGCCTCAGTTTACTTGGGACAGACAGATATAAAAGTTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR GCA 72 bp ACCAGTTTACCGGGCATGTCATCTCTGTTACTGTCATaGAGTAAATACTCAGGAAATGAAGGATTACTAATG +
Preference number: 3 (lower is better)
Translates to: TSLPGMSSLLLS*SKYSGNEGLLM
Trigger: CATTAGTAATCCTTCATTTCCTGAGTATTTACTGCATGACAGTAACAGAGATGACATGCCCGGTAAACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp ACTCAACCACATCTTACTCCTTCTTGCCTTCCTGTCTaGCAATTTGAAGTTTTCCTAACCATCTATGGAAAT +
Preference number: 3 (lower is better)
Translates to: TQPHLTPSCLPV*QFEVFLTIYGN
Trigger: ATTTCCATAGATGGTTAGGAAAACTTCAAATTGGCAGACAGGAAGGCAAGAAGGAGTAAGATGTGGTTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CCA 72 bp TTGGTTACATCTAAGTTCCCAGCACTTAGCAGTGTCTaGCATTTGGTAACTCTCATTGTTGAACAGATTGTT +
Preference number: 3 (lower is better)
Translates to: LVTSKFPALSSV*HLVTLIVEQIV
Trigger: AACAATCTGTTCAACAATGAGAGTTACCAAATGCCAGACACTGCTAAGTGCTGGGAACTTAGATGTAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCTGAGTCAAGATGATTaGGTTGAGGTAGATACAGAC +
Preference number: 3 (lower is better)
Translates to: YDLFHDSETITPSNGSTKLSQDD*VEVDTD
Trigger: GTCTGTATCTACCTCAACCAAATCATCTTGACTCAG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCTGCTTATCTTAATCTaGACAGTACAAGGAAGCAGG +
Preference number: 3 (lower is better)
Translates to: YDLFHDSETITPSNGSTKLLILI*TVQGSR
Trigger: CCTGCTTCCTTGTACTGTCAAGATTAAGATAAGCAG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGAACATCACATTACCTTaGCACCAGGGAAGCATACTT +
Preference number: 3 (lower is better)
Translates to: YDLFHDSETITPSNGSTKNITLP*HQGSIL
Trigger: AAGTATGCTTCCCTGGTGCAAAGGTAATGTGATGTT...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR GCA 72 bp GCCCAGAATATACTAACTATATTGTCAGTTAAGAGTTaGCTTACAACCCTGGCTACTAAATTGTCTGGTTCA +
Preference number: 3 (lower is better)
Translates to: AQNILTILSVKS*LTTLATKLSGS
Trigger: TGAACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAATATAGTTAGTATATTCTGGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp GAATGGAGAGGTTCCTCTTTACATGTGAAAGACCTTTaGGTTTACACTTTCAAACTCCTTGAGTCAAGAATA +
Preference number: 3 (lower is better)
Translates to: EWRGSSLHVKDL*VYTFKLLESRI
Trigger: TATTCTTGACTCAAGGAGTTTGAAAGTGTAAACTCAAAGGTCTTTCACATGTAAAGAGGAACCTCTCCATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp ATACAAGTACAGAATGGAGAGGTTCCTCTTTACATGTaGAAGACCTTTGAGTTTACACTTTCAAACTCCTTG +
Preference number: 3 (lower is better)
Translates to: IQVQNGEVPLYM*KTFEFTLSNSL
Trigger: CAAGGAGTTTGAAAGTGTAAACTCAAAGGTCTTTCACATGTAAAGAGGAACCTCTCCATTCTGTACTTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp ACAAATTCACATAGAAGTGATCAGGATCTAGAGACTTaGTTTATGCCATGCAGATTCACAGGGCATTTGTTT +
Preference number: 3 (lower is better)
Translates to: TNSHRSDQDLET*FMPCRFTGHLF
Trigger: AAACAAATGCCCTGTGAATCTGCATGGCATAAATCAAGTCTCTAGATCCTGATCACTTCTATGTGAATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp GTTGTTTATATTTGGAAGTCAGAAAAACATGTTGCTTaGAAGGCATTAAGATGCATGGGGTCACTTAAAGCT +
Preference number: 3 (lower is better)
Translates to: VVYIWKSEKHVA*KALRCMGSLKA
Trigger: AGCTTTAAGTGACCCCATGCATCTTAATGCCTTTCAAGCAACATGTTTTTCTGACTTCCAAATATAAACAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp GTTGTACATTATAAAATGCATCACAGAGCGATTTATTaGTGCAAAGGAACCGTTTTGGCTCATGTAAGTGAA +
Preference number: 3 (lower is better)
Translates to: VVHYKMHHRAIY*CKGTVLAHVSE
Trigger: TTCACTTACATGAGCCAAAACGGTTCCTTTGCATCAATAAATCGCTCTGTGATGCATTTTATAATGTACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR TCA 72 bp CATTTGTTTATAAAATTTGTGCTGGAAGATTACTTGTaGACTAGGGCCAAACCCTTAATTATGACTAGGGAA +
Preference number: 3 (lower is better)
Translates to: HLFIKFVLEDYL*TRAKPLIMTRE
Trigger: TTCCCTAGTCATAATTAAGGGTTTGGCCCTAGTTCACAAGTAATCTTCCAGCACAAATTTTATAAACAAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCCCAAAGCGGACGTCATaGTGTTCGGCCCGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCPKRTS*CSARRF
Trigger: GAACCGCCGGGCCGAACAGCATGACGTCCGCTTTGG...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGAAAAGGTGTGCAGGGTaGAAATCAGGAGAAACCAGG +
Preference number: 4 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQKRCAG*KSGETR
Trigger: CCTGGTTTCTCCTGATTTTCACCCTGCACACCTTTT...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAGCCGCCGGCGAACTCTaGGTCGTTCCGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRAAGEL*VVPGPS
Trigger: TGAGGGCCCCGGAACGACCCAGAGTTCGCCGGCGGC...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR GCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCCCAAGATTGCACCACTaGACTCCAGCCTGGCGAAAG +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCPRLHH*TPAWRK
Trigger: CTTTCGCCAGGCTGGAGTGCAGTGGTGCAATCTTGG...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAACGGGTAACGCAGCGGTaGCGACAGCAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: AERFFTCTSESCIINSLQRVTQR*RQQAEL
Trigger: CAGTTCTGCTTGCTGTCGGCACCGCTGCGTTACCCG...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTGTAGGTGCCCCAGTCTaGACTGCCTTGCTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIVGAPV*TALLFT
Trigger: AGTGAAAAGCAAGGCAGTTCAGACTGGGGCACCTAC...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAACTCCTGGGCTCAGGTaGTCCACCCACCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRTPGLR*STHLGL
Trigger: GAGGCCAAGGTGGGTGGATCACCTGAGCCCAGGAGT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTGCCTTTCACTGCCATaGTACACTGGACTAGCCCAA +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCCLSLP*YTGLAQ
Trigger: TTGGGCTAGTCCAGTGTAGCATGGCAGTGAAAGGCA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCAATGGCAGCATTGTTaGTTGTTCACCCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PASEILASILAQWQHCWLQWQHC*LFTPSP
Trigger: TGGGGATGGGGTGAACAACCAACAATGCTGCCATTG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCGCTAATAAGCTCTCTTaGGCCTTGGTGTTCAGGGTT +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCANKLS*ALVFRV
Trigger: AACCCTGAACACCAAGGCTCAAGAGAGCTTATTAGC...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGATAATTAAATGGTCCTaGATGGTTAGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQIIKWS*MVSHVL
Trigger: GAGAACATGGCTAACCATTCAGGACCATTTAATTAT...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATGGCGAGGCCGGTCTTaGACTCCTGACCTGATCCAC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRWRGRS*TPDLIH
Trigger: GTGGATCAGGTCAGGAGTTCAAGACCGGCCTCGCCA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAACTCCTGACCTCAAGTaGTCCACCCGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRTPDLK*STRLHL
Trigger: GAGGTGGAGGCGGGTGGATCACTTGAGGTCAGGAGT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACGGGTAACGCAGCGGTaGCGACAGCAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRRVTQR*RQQAEL
Trigger: CAGTTCTGCTTGCTGTCGGCACCGCTGCGTTACCCG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACCAAAGCGGACGTCATaGTGTTCGGCCCGGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIPKRTS*CSARRF
Trigger: GAACCGCCGGGCCGAACAGCATGACGTCCGCTTTGG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR GCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAGAAAACGGCCCACAATaGAGGTTTGGGAACTGCGTT +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSENGPQ*RFGNCV
Trigger: AACGCAGTTCCCAAACCTGCATTGTGGGCCGTTTTC...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGAGGACTCAGAAAAGCTaGTATGCTCCCAGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: PASEILASILAQWQHCWLRTQKS*YAPSCR
Trigger: TCTGCAACTGGGAGCATAGCAGCTTTTCTGAGTCCT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTGTCCCTCATGGCTACTaGACAATGCTTAGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIVPHGY*TMLRLF
Trigger: AAACAACCTAAGCATTGTGCAGTAGCCATGAGGGAC...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTGGTACACTTCCCTTTaGCTTTTGGAGACATCACTG +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIWYTSL*LLETSL
Trigger: CAGTGATGTCTCCAAAAGGCAAAGGGAAGTGTACCA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTAACTCAGCACCAGGCCTaGCACATGATATGCACTCAA +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALTQHQA*HMICTQ
Trigger: TTGAGTGCATATCATGTGCCAGGCCTGGTGCTGAGT...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCATCTTTGCCATGCATaGGAAGCTTTTATATATTGC +
Preference number: 4 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQHLCHA*EAFIYC
Trigger: GCAATATATAAAAGCTTCCCATGCATGGCAAAGATG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGATTTTCATTCTCTGTTaGCACTTAGGGAAGGCATTT +
Preference number: 4 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQIFILC*HLGKAF
Trigger: AAATGCCTTCCCTAAGTGCCAACAGAGAATGAAAAT...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCAATGGAAAGGACCCCTaGGCCCGCAGCAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFNGKDP*ARSSGK
Trigger: CTTCCCGCTGCTGCGGGCCCAGGGGTCCTTTCCATT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGACAGCAAGCAGAACTaGAAGGGCGCGCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFDSKQN*KGAPEP
Trigger: GGGTTCTGGCGCGCCCTTTCAGTTCTGCTTGCTGTC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATCACCCAGGCTGGAGTaGAGTAGGGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRSPRLE*SRVISA
Trigger: AGCCGAGATCACCCTACTGCACTCCAGCCTGGGTGA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGCGATCTCGGCTCACTaGAACTTCCACCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIAISAH*NFHLPG
Trigger: GCCTGGGAGGTGGAAGTTGCAGTGAGCCGAGATCGC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTATCAGTATTTACTTGCTaGGGAGGTGGCCTTACCCTA +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALSVFTC*GGGLTL
Trigger: TAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGA...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATCTCTACATGCTCCATaGCAGCTCCAGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: AERFFTCTSESCIINSLQSLHAP*QLQAHT
Trigger: TGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAGCCTCCCGAGTAGCTaGGATTACAGGCTTGCGCCA +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRSLPSS*DYRLAP
Trigger: TGGCGCAAGCCTGTAATCCCAGCTACTCGGGAGGCT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp CAACACACACTAGTTTTTAATACAAGACACAATGTATaGTGTCCCTGGAGTTGTCTCCCCACCCACCCTGAC +
Preference number: 4 (lower is better)
Translates to: QHTLVFNTRHNV*CPWSCLPTHPD
Trigger: GTCAGGGTGGGTGGGGAGACAACTCCAGGGACACAATACATTGTGTCTTGTATTAAAAACTAGTGTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCAGTCATCCATTTCCATaGAGATTCTCCTCCAATCTC +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCSHPFP*RFSSNL
Trigger: GAGATTGGAGGAGAATCTTCATGGAAATGGATGACT...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTACTGGAAGATTACTTGTaGACTAGGGCCAAACCCTTA +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALLEDYL*TRAKPL
Trigger: TAAGGGTTTGGCCCTAGTTCACAAGTAATCTTCCAG...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCCTCCTGGGTTCAAGTaGTTCTCCCACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFPPGFK*FSHLSL
Trigger: GAGGCTGAGGTGGGAGAATCACTTGAACCCAGGAGG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTGGAGTGCAGTAGGGTaGTCTCGGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFWSAVG*SRLTAT
Trigger: GGTTGCAGTGAGCCGAGATCACCCTACTGCACTCCA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTCTAAATTTGCCTGTTTaGCTTACCCACTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSILNLPV*LTHFPS
Trigger: TGATGGAAAGTGGGTAAGGCAAACAGGCAAATTTAG...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTTGTCAGTTAAGAGTTaGCTTACAACCCTGGCTACT +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCLSVKS*LTTLAT
Trigger: AGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCAGGCTGGAATGCAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFQAGMQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCAGCACTGCATTCCAGCCTG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTTGCCCAGGCTGGAGTaGAAAGGCGCAACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFLPRLE*KGATLA
Trigger: AGCCAAGGTTGCGCCTTTGCACTCCAGCCTGGGCAA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCGCAAACTACCACCAGTaGAATCGGATAAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCANYHQ*NRINAN
Trigger: ATTGGCATTTATCCGATTCCACTGGTGGTAGTTTGC...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTTAAATGGTCCTGAATaGTTAGCCATGTTCTCCGCA +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCLNGPE*LAMFSA
Trigger: TGCGGAGAACATGGCTAACCATTCAGGACCATTTAA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACAGGCTGGAGTGCAGTaGCACGATCTTGACTCACTC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRQAGVQ*HDLDSL
Trigger: GAGTGAGTCAAGATCGTGCCACTGCACTCCAGCCTG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp CACCACTTTCCTTCGCTGTTTAGTGACTATTCCTTTTaGCTCCATTACACAGCTGCTGAACCACAACGAGTA +
Preference number: 4 (lower is better)
Translates to: HHFPSLFSDYSF*LHYTAAEPQRV
Trigger: TACTCGTTGTGGTTCAGCAGCTGTGTAATGGAGCAAAAAGGAATAGTCACTAAACAGCGAAGGAAAGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 72 bp AGTTCAGCAACGGTGTTTACCAACACATGCAAAGTATaGCTAATAAGCTCTCTTGAGCCTTGGTGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SSATVFTNTCKV*LISSLEPWCSG
Trigger: CCCTGAACACCAAGGCTCAAGAGAGCTTATTAGCAATACTTTGCATGTGTTGGTAAACACCGTTGCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTAGGAGTCAAAATCCAGTaGCACACTCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALGVKIQ*HTHKNS
Trigger: GGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCC...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACCATTACACAGCTGCTaGACCACAACGAGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIPLHSC*TTTSRA
Trigger: GGCCCTACTCGTTGTGGTTCAGCAGCTGTGTAATGG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTGTTCAGGGTTTTTATaGGGGTTCAGTCACATAAAT +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSICSGFL*GFSHIN
Trigger: ATTTATGTGACTGAACCCTCATAAAAACCCTGAACA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTCAACCTAGCACAAGTTaGAGTATCACAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIQPSTS*SITNFK
Trigger: CTTGAAATTTGTGATACTTCAACTTGTGCTAGGTTG...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTACAGGATCTAGAGACTTaGTTTATGCCATGCAGATTC +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALQDLET*FMPCRF
Trigger: GAATCTGCATGGCATAAATCAAGTCTCTAGATCCTG...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTGTTTTCACCTGCCTCTaGGATACTTGCTTCTATACT +
Preference number: 4 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIVFTCL*DTCFYT
Trigger: AGTATAGAAGCAAGTATCTCAGAGGCAGGTGAAAAC...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAGCTGGGTTTAGATTGTaGCTGAGTCACAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: AERFFTCTSESCIINSLQAGFRL*LSHKAQ
Trigger: CTGTGCTTTGTGACTCAGGCACAATCTAAACCCAGC...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGATTGTCTGGTTCACATaGCATTACAAAGGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PASEILASILAQWQHCWLIVWFT*HYKGPL
Trigger: TAAAGGCCCTTTGTAATGGCATGTGAACCAGACAAT...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGTGCAGGTTTGGGAACTaGGTTAGATCATCTGAATAT +
Preference number: 4 (lower is better)
Translates to: PASEILASILAQWQHCWLCRFGN*VRSSEY
Trigger: ATATTCAGATGATCTAACGCAGTTCCCAAACCTGCA...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTAGTGACTATTCCTTTTTaGTCCATTACACAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALVTIPF*SITQLL
Trigger: CAGCAGCTGTGTAATGGAGCAAAAAGGAATAGTCAC...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTCATCTTACTCCTTCTTaGCTTCCTGTCTGCCAATTT +
Preference number: 4 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIHLTPS*LPVCQF
Trigger: AAATTGGCAGACAGGAAGGCAAGAAGGAGTAAGATG...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTGTACCAGTGAGAGCTaGATCATTAATAGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: ETLSTCSMAAPGSHILSICTSES*IINSLQ
Trigger: TTGAAGACTATTAATGATGCAGCTCTCACTGGTACA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGTGATCTCGGCTCACTaGAACCTCTACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFVISAH*NLYLLG
Trigger: ACCCAGGAGGTAGAGGTTGCAGTGAGCCGAGATCAC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCACTGCACTCCAGCCTaGCGAAAGAGCAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKHCTPA*RKSKKC
Trigger: ACACTTCTTGCTCTTTCGCCAGGCTGGAGTGCAGTG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCACATATGACAAAGATCTaGCCAATGGCATTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSHMTKI*PMAFKQ
Trigger: CTGCTTGAATGCCATTGGCCAGATCTTTGTCATATG...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAGGCAGAGCCCTTTCTaGACTCTACCCAGGCTACTT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRRQSPF*TLPRLL
Trigger: AAGTAGCCTGGGTAGAGTCCAGAAAGGGCTCTGCCT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp TCAGTTAAGAGTTGCCTTACAACCCTGGCTACTAAATaGTCTGGTTCACATGCCATTACAAAGGGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: SVKSCLTTLATK*SGSHAITKGLY
Trigger: GTAAAGGCCCTTTGTAATGGCATGTGAACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAACTCTTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACGGCAACAGTTCGGTTaGTGTAGTTCTCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIRQQFG*CSSPKR
Trigger: CCGCTTTGGAGAACTACATCAACCGAACTGTTGCCG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249299.7
ENST00000424702.1
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACCCCCTGTGAAGAGCTaGATACTCGTTCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRPPVKS*ILVHGF
Trigger: AAAGCCATGAACGAGTATTCAGCTCTTCACAGGGGG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAAAAACTGTCAGCATGTaGGGCCAAGTTACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: AERFFTCTSESCIINSLQKTVSM*GQVTKV
Trigger: CACTTTGGTAACTTGGCCTCACATGCTGACAGTTTT...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTACACTATACAGAGGAATaGAGATCACATCAAAGCATC +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALHYTEE*RSHQSI
Trigger: GATGCTTTGATGTGATCTTCATTCCTCTGTATAGTG...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAACTGACCTTAGCTCCTaGATCTCGTTTCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRTDLSS*ISFPRA
Trigger: AGCTCTGGGAAACGAGATTCAGGAGCTAAGGTCAGT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTGTCTCTTTATTGCTTaGTTCTGCTTTCCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LSTCSMAAPGSHILSIKICLFIA*FCFPEL
Trigger: CAACTCAGGAAAGCAGAATCAAGCAATAAAGAGACA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCATTACCCTGGCCTGGTaGCCTATAGTCCCAGCTACT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFITLAW*PIVPAT
Trigger: AGTAGCTGGGACTATAGGTCACCAGGCCAGGGTAAT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACTGTCCCAAGTAAACTaGGGCCACAGGGACATCTTA +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRLSQVN*GHRDIL
Trigger: TAAGATGTCCCTGTGGCCTCAGTTTACTTGGGACAG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGCAGTGGCACGATCTTaGCTCACTCCAACCTCTACT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIAVARS*LTPTST
Trigger: AGTAGAGGTTGGAGTGAGTCAAGATCGTGCCACTGC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTCAGAAAAGCTGCTATaGTCCCAGTTGCAGATTATA +
Preference number: 4 (lower is better)
Translates to: LSTCSMAAPGSHILSIKISEKLL*SQLQII
Trigger: TATAATCTGCAACTGGGAGCATAGCAGCTTTTCTGA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCAGAGGCAGGAGGATTaGTTGGGCTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFQRQED*LGSGVQ
Trigger: TTGAACTCCTGAGCCCAAGCAATCCTCCTGCCTCTG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGCAACCTTGGCTCACTaGAACCTCCATCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIATLAH*NLHLPG
Trigger: ACCTGGTAGATGGAGGTTGCAGTGAGCCAAGGTTGC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTTGCACAGGCTGGAGTaGAGTGGCACGATCTTGACT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFLHRLE*SGTILT
Trigger: AGTCAAGATCGTGCCACTGCACTCCAGCCTGTGCAA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCATACTACTCATGGTTGTaGCTCCCTTACAATTCTCAT +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSYYSWL*LPYNSH
Trigger: ATGAGAATTGTAAGGGAGCCACAACCATGAGTAGTA...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTATTACTCCCTCCAATaGCTCTACAAAGCCAATATA +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCYYSLQ*LYKANI
Trigger: TATATTGGCTTTGTAGAGCCATTGGAGGGAGTAATA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCCACATTGGCCAAGTTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFPHWPS*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCAACTTGGCCAATGTGG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAGCGGTTTCACCACATTaGCCAAGTTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRAVSPH*PSWSRT
Trigger: AGTTCGAGACCAACTTGGCCAATGTGGTGAAACCGC...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATCTGATCCAGAGACCTaGGCCCTATCTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRISDPET*ALSALS
Trigger: AGACAGAGCAGATAGGGCCCAGGTCTCTGGATCAGA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp AGCGTATCATATCCTTGTAGGGACATTGATGGGAATTaGATACCAGTTGTAGCAATGCTTGATCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVSYPCRDIDGN*IPVVAMLDLCH
Trigger: ATGGCACAGATCAAGCATTGCTACAACTGGTATCAAATTCCCATCAATGTCCCTACAAGGATATGATACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 72 bp AATGCATCTTTGCCATGCATGGGAAGCTTTTATATATaGCCTTCAAACACCAGTTTACCGGGCATGTCATCT +
Preference number: 4 (lower is better)
Translates to: NASLPCMGSFYI*PSNTSLPGMSS
Trigger: AGATGACATGCCCGGTAAACTGGTGTTTGAAGGCAATATATAAAAGCTTCCCATGCATGGCAAAGATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
3UTR CAA 72 bp ACATCTAAGTTCCCAGCACTTAGCAGTGTCTGGCATTaGGTAACTCTCATTGTTGAACAGATTGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TSKFPALSSVWH*VTLIVEQIVAK
Trigger: CTTTGCAACAATCTGTTCAACAATGAGAGTTACCAAATGCCAGACACTGCTAAGTGCTGGGAACTTAGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGTTGTTCTACCCCCTGTaGAGAGCTGAATACTCGTTC +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKLFYPL*RAEYSF
Trigger: GAACGAGTATTCAGCTCTTCACAGGGGGTAGAACAA...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAAATTTTAATCGGTTGTaGGAAAACAGTCCACCATGT +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSNFNRL*ENSPPC
Trigger: ACATGGTGGACTGTTTTCTCACAACCGATTAAAATT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATCTTCCAGGAACTGGTaGAGGACAGGTCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRSSRNW*RTGPFF
Trigger: AAAGAAAGGACCTGTCCTTCACCAGTTCCTGGAAGA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCGTGTTTACCAACACATaGAAAGTATTGCTAATAAGC +
Preference number: 4 (lower is better)
Translates to: STLGNCNENGPQCRFGNCVFTNT*KVLLIS
Trigger: GCTTATTAGCAATACTTTGCATGTGTTGGTAAACAC...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCCCCTAAAATCAACTTaGTGCTCTAAGAATAAAGTA +
Preference number: 4 (lower is better)
Translates to: PASEILASILAQWQHCWLPLKST*CSKNKV
Trigger: TACTTTATTCTTAGAGCAGCAAGTTGATTTTAGGGG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGACCTGGGCCCTATCTaGTCTGTCTCTCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFDLGPI*SVSLSL
Trigger: TAATGAGAGAGAGACAGAGCAGATAGGGCCCAGGTC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATTCAAGCGATTCTCATaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIFKRFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCATGAGAATCGCTTGAA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAAGTTGCCTTACAACCCTaGCTACTAAATTGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AERFFTCTSESCIINSLQVALQP*LLNCLV
Trigger: AACCAGACAATTTAGTAGCCAGGGTTGTAAGGCAAC...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATACTTGCTGGGGAGGTaGCCTTACCCTACACTTGAA +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIYLLGR*PYPTLE
Trigger: TTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGCAACCTCTACCTCCTaGGTTCAAGTGATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFATSTS*VQVILP
Trigger: TGGGAGAATCACTTGAACCCAGGAGGTAGAGGTTGC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATTGTTCTACCCCCTGTaGAGAGCTGAATACTCGTTC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRILFYPL*RAEYSF
Trigger: GAACGAGTATTCAGCTCTTCACAGGGGGTAGAACAA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR GCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGAACATATTAGTTTCCTaGCTGTTCCCCACCCCAACA +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKNILVS*LFPTPT
Trigger: TGTTGGGGTGGGGAACAGGCAGGAAACTAATATGTT...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCATGTCAGTATTTACTTaGTGGGGAGGTGGCCTTACC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFMSVFT*WGGGLT
Trigger: GGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAGTCAGAAAAACATGTTaGTTGAAAGGCATTAAGATG +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSVRKTC*LKGIKM
Trigger: CATCTTAATGCCTTTCAAGCAACATGTTTTTCTGAC...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAATGGCTACTGCACAATaGTTAGGTTGTTTATATTTG +
Preference number: 4 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSMATAQ*LGCLYL
Trigger: CAAATATAAACAACCTAAGCATTGTGCAGTAGCCAT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCTCCACCTCCCAAAGTaGTGGGATTACATGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFLHLPK*WDYMLE
Trigger: TTCAAGCATGTAATCCCAGCACTTTGGGAGGTGGAG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTAGAAACATACAAAAGATaGCCTTACAGGGAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: HFYLPTPLSAREQLLEALETYKR*PYREKV
Trigger: AACTTTTTCCCTGTAAGGCCATCTTTTGTATGTTTC...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAGAGAAAATAGTGGCCTaGGTACTGGGTCACTTCTTT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILREKIVA*VLGHFF
Trigger: AAAGAAGTGACCCAGTACCCAGGCCACTATTTTCTC...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGCCTTACCCTACACTTaGATTTCTCAAAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIALPYT*ISQSLS
Trigger: AGACAGGCTTTGAGAAATTCAAGTGTAGGGTAAGGC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGTTAGGGTAACCATATaGCAAAGATCTGGCCAATGG +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIVRVTI*QRSGQW
Trigger: CCATTGGCCAGATCTTTGTCATATGGTTACCCTAAC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATTAGGGAATGCAAATTaGAAACAGACTCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRLGNAN*KQTLAR
Trigger: CCTTGCCAGAGTCTGTTTTCAATTTGCATTCCCTAA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACACTTTGACTCTGGTTaGTCCTTTCTGTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRHFDSG*SFLYFL
Trigger: GAGAAAGTACAGAAAGGAGCAACCAGAGTCAAAGTG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATGCATAGAGGAAAATaGATCTTTGCCATGCATGGG +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRMHRGK*IFAMHG
Trigger: CCCATGCATGGCAAAGATGCATTTTCCTCTATGCAT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAGATATGGTAGTCAGTaGGACAGACGCTTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRRYGSQ*DRRLKS
Trigger: GCTTTTTAAGCGTCTGTCCCACTGACTACCATATCT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTACAGGCACCATGCCTaGCCAATTACTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFYRHHA*PITLEL
Trigger: AAGTTCAAGAGTAATTGGCCAGGCATGGTGCCTGTA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp AAATTACTGCCTCCTCTGTGTTTAGGGAGTCTGCTCTaGGTCTTACAAGTCCAAAAGCAGAATATTACAAAT +
Preference number: 4 (lower is better)
Translates to: KLLPPLCLGSLL*VLQVQKQNITN
Trigger: ATTTGTAATATTCTGCTTTTGGACTTGTAAGACCAAGAGCAGACTCCCTAAACACAGAGGAGGCAGTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAATCATTCTCCCATCTaGTGTAATAACGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRNHSPI*CNNGNS
Trigger: ACTGTTGCCGTTATTACATCAGATGGGAGAATGATT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGGAGTCAAAATCCAGTaGCACACTCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIGVKIQ*HTHKNS
Trigger: GGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGGAGTCAAAATCCAGTaGCACACTCATAAAAACTCC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFGVKIQ*HTHKNS
Trigger: GGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATACTCACTAGAAAACTaGTTTGGCATTCTTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRYSLEN*FGILLA
Trigger: GGCTAGAAGAATGCCAAATCAGTTTTCTAGTGAGTA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATTGGCGTGAGTCAGTaGACTGCATATTTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIIGVSQ*TAYLSH
Trigger: GTGACTTAAATATGCAGTTCACTGACTCACGCCAAT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACAAACAACATTGGCGTaGGTCAGTGAACTGCATATT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIQTTLA*VSELHI
Trigger: AATATGCAGTTCACTGACTCACGCCAATGTTGTTTG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGATTTCTCCAATGACTaGAACGTTGTCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIDFSND*NVVTSY
Trigger: GTAAGAGGTGACAACGTTGCAGTCATTGGAGAAATC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249299.7
ENST00000422760.1
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAAAGCCAATATAATGTaGACTTGGATACCTAGTCCC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRKANIM*TWIPSP
Trigger: GGGACTAGGTATCCAAGTGCACATTATATTGGCTTT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAACAAGTACAAAGATTTaGAAAACTGTTGTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRITSTKI*KTVVAA
Trigger: GGCGGCGACAACAGTTTTGCAAATCTTTGTACTTGT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAACCCACCCTGACTCCTaGATTCTTTTTAACGTATTT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRTHPDS*ILFNVF
Trigger: AAATACGTTAAAAAGAATCCAGGAGTCAGGGTGGGT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAATATAATGTGCACTTaGATACCTAGTCCCTCATGG +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRNIMCT*IPSPSW
Trigger: CCATGAGGGACTAGGTATCCAAGTGCACATTATATT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGTCTATACTAGCACAATaGCAGCATTGTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKSILAQ*QHCWLF
Trigger: GAACAACCAACAATGCTGCCATTGTGCTAGTATAGA...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTACAGTAGGGTATTTTaGGGAAAGCCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFYSRVF*GKPLLH
Trigger: ATGGAGAAGAGGCTTTCCCCAAAATACCCTACTGTA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAAAAGCAAACAACATTaGCGTGAGTCAGTGAACTGC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIKSKQH*RESVNC
Trigger: GCAGTTCACTGACTCACGCCAATGTTGTTTGCTTTT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp ATTTTGAAGATGAAGGCCCAGAATATACTAACTATATaGTCAGTTAAGAGTTGCCTTACAACCCTGGCTACT +
Preference number: 4 (lower is better)
Translates to: ILKMKAQNILTI*SVKSCLTTLAT
Trigger: AGTAGCCAGGGTTGTAAGGCAACTCTTAACTGACAATATAGTTAGTATATTCTGGGCCTTCATCTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCAATCATTCTCCCATCTaGTGTAATAACGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFNHSPI*CNNGNS
Trigger: ACTGTTGCCGTTATTACATCAGATGGGAGAATGATT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAATCATTCTCCCATCTaGTGTAATAACGGCAACAGT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRINHSPI*CNNGNS
Trigger: ACTGTTGCCGTTATTACATCAGATGGGAGAATGATT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249299.7
ENST00000422760.1
ENST00000424702.1
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACTTATAAGGCTGATTTaGGTGAAGATATTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRLIRLI*VKIFSS
Trigger: GGAGGAAAATATCTTCACTCAAATCAGCCTTATAAG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACATGTGAAAGACCTTTaGGTTTACACTTTCAAACTC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRHVKDL*VYTFKL
Trigger: GAGTTTGAAAGTGTAAACTCAAAGGTCTTTCACATG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATCCTGTCTGCCAATTTaGAGTTTTCCTAACCATCTA +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRISCLPI*SFPNHL
Trigger: TAGATGGTTAGGAAAACTTCAAATTGGCAGACAGGA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCACCTCTTTCTGTATGTaGTCGGTGTATCTTATCTCA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFTSFCM*SVYLIS
Trigger: TGAGATAAGATACACCGATCACATACAGAAAGAGGT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAAACAGTCCACCATGTaGTTGTATCCAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIKQSTM*LYPGIK
Trigger: CTTTATTCCTGGATACAAGCACATGGTGGACTGTTT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCAGGCTTCTGATAGATaGTTGATAGCAGATTTTAAG +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKQASDR*LIADFK
Trigger: CTTAAAATCTGCTATCAAGCATCTATCAGAAGCCTG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCACATCACATTACCTTTaGACCAGGGAAGCATACTTT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFTSHYL*TREAYF
Trigger: AAAGTATGCTTCCCTGGTGCAAAGGTAATGTGATGT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAACCAATTCTGTTCAATaGATCCAAATTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRTNSVQ*IQIHVP
Trigger: GGGAACATGAATTTGGATGCATTGAACAGAATTGGT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCAGTCTGAACTGCCTTaGTTTTCACTTTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFQSELP*FSLFCS
Trigger: AGAACAGAAAAGTGAAAAGCAAGGCAGTTCAGACTG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACGTGAGTCAGTGAACTaGATATTTAAGTCACAAAAC +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRRESVN*IFKSQN
Trigger: GTTTTGTGACTTAAATATGCAGTTCACTGACTCACG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CCA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGATCATACCTAACCAATTaGGCATCAAGAGACTTTACT +
Preference number: 4 (lower is better)
Translates to: KESKSSDTLIKTPYIILRSYLTN*ASRDFT
Trigger: AGTAAAGTCTCTTGATGCCCAATTGGTTAGGTATGA...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCATGAGGGACAGGACTaGTTTTTATTTGTTTATGTG +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKHEGQD*FLFVYV
Trigger: CACATAAACAAATAAAAACCAGTCCTGTCCCTCATG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGGCAGTTAGGTCAAGATaGATGAAAGTATTGTTCATG +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKAVRSR*MKVLFM
Trigger: CATGAACAATACTTTCATCCATCTTGACCTAACTGC...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGTAGAGAGACAGCTTTaGTTGAAACCTAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIVERQL*LKPKEV
Trigger: CACTTCTTTAGGTTTCAACCAAAGCTGTCTCTCTAC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGACAGAAACAGTCTGTaGACCATCGTTAAACTTTTT +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFDRNSL*TIVKLF
Trigger: AAAAAGTTTAACGATGGTTCACAGACTGTTTCTGTC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR TCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACTGGCCAATTACTCTTaGACTTTTATATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRILANYS*TFISVC
Trigger: ACAGACAGATATAAAAGTTCAAGAGTAATTGGCCAG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR TCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCAAATCATTTTTGACGTaGTTGGCTCAGGTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFKSFLT*LAQVKS
Trigger: GCTTTTAACCTGAGCCAATCACGTCAAAAATGATTT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATCTCCCATATTGCTATaGATAGAGGAAAATGCATCT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRISPILL*IEENAS
Trigger: AGATGCATTTTCCTCTATGCATAGCAATATGGGAGA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGACAGGTCCTTTCTTTaGAATAAAAAGGATTTGAGC +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIDRSFL*NKKDLS
Trigger: GCTCAAATCCTTTTTATTGCAAAGAAAGGACCTGTC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGAATAACATTAGCAATTaGAAACCTCAGTTCGTTCCA +
Preference number: 4 (lower is better)
Translates to: YDLFHDSETITPSNGSTKNNISN*KPQFVP
Trigger: TGGAACGAACTGAGGTTTGCAATTGCTAATGTTATT...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCTTCTTAGAACATCTTaGTTTGGAGTTTGGGAGTTA +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFLLRTS*FGVWEL
Trigger: TAACTCCCAAACTCCAAAGCAAGATGTTCTAAGAAG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATTATGTTACTACTCATaGTTGTGGCTCCCTTACAAT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRILCYYS*LWLPYN
Trigger: ATTGTAAGGGAGCCACAACCATGAGTAGTAACATAA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTTCAAACTTTGGCCTTaGACTCTAGAAATATGTTCC +
Preference number: 4 (lower is better)
Translates to: SSDTLIKTPYIILRIISFFKLWP*TLEICS
Trigger: GGAACATATTTCTAGAGTCCAAGGCCAAAGTTTGAA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
3UTR CAA 72 bp CATGATGAATCTCAGGTTACACGGCTGAGGAAAATGTaGACATCGTTATTCTGTATTTGCATTAAATACCAT +
Preference number: 4 (lower is better)
Translates to: HDESQVTRLRKM*TSLFCICIKYH
Trigger: ATGGTATTTAATGCAAATACAGAATAACGATGTCAACATTTTCCTCAGCCGTGTAACCTGAGATTCATCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR GCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATCTCTGTTACTGTCATaGAGTAAATACTCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRISLLLS*SKYSGN
Trigger: ATTTCCTGAGTATTTACTGCATGACAGTAACAGAGA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CCA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAACTAGAAAACTGATTTaGCATTCTTCTAGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ESKSSDTLIKTPYIILRITRKLI*HSSSLY
Trigger: ATAGAGGCTAGAAGAATGCCAAATCAGTTTTCTAGT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS CCA 90 bp TGGGCCCGCAGCAGCGGGAAGGCTCGAGGCGCCGCCGGCGAACTCTaGGTCGTTCCGGGGCCCTCATCTCCTCGCCCGCCCCCAGGATCC +
Preference number: 5 (lower is better)
Translates to: WARSSGKARGAAGEL*VVPGPSSPRPPPGS
Trigger: GGATCCTGGGGGCGGGCGAGGAGATGAGGGCCCCGGAACGACCCAGAGTTCGCCGGCGGCGCCTCGAGCCTTCCCGCTGCTGCGGGCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS GCA 90 bp CGGACGTCATGCTGTTCGGCCCGGCGGTTCCGGGTAACGCAGCGGTaGCGACAGCAAGCAGAACTGAAAGGGCGCGCCAGAACCCGGCAG +
Preference number: 5 (lower is better)
Translates to: RTSCCSARRFRVTQR*RQQAELKGRARTRQ
Trigger: CTGCCGGGTTCTGGCGCGCCCTTTCAGTTCTGCTTGCTGTCGGCACCGCTGCGTTACCCGGAACCGCCGGGCCGAACAGCATGACGTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCTGCTATGCTCCCAGTaGCAGATTATAGTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQLLCSQ*QIIVRG
Trigger: TCCTCTCACTATAATCTGCAACTGGGAGCATAGCAG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTACTGGGTCACTTCTTaGAGTAGGTGCCCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIYWVTS*SRCPSL
Trigger: CAGACTGGGGCACCTACTCAAAGAAGTGACCCAGTA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCCAATGACTGCAACGTaGTCACCTCTTACAATGTAT +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQPMTAT*SPLTMY
Trigger: ATACATTGTAAGAGGTGACAACGTTGCAGTCATTGG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCGGCTGAGGAAAATGTaGACATCGTTATTCTGTATT +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQRLRKM*TSLFCI
Trigger: AATACAGAATAACGATGTCAACATTTTCCTCAGCCG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGTCAGGATCTAGAGACTaGATTTATGCCATGCAGATT +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQSGSRD*IYAMQI
Trigger: AATCTGCATGGCATAAATCAAGTCTCTAGATCCTGA...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCCTTATAAGGCTGATTaGAGTGAAGATATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQPYKAD*SEDIFL
Trigger: GAGGAAAATATCTTCACTCAAATCAGCCTTATAAGG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGCTGTTTCTAGTTGTTTaGAATGAATCCAGAACCCAT +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQLFLVV*NESRTH
Trigger: ATGGGTTCTGGATTCATTCAAAACAACTAGAAACAG...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCGGCCTTACCCTACACTaGAATTTCTCAAAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCGLTLH*NFSKPV
Trigger: GACAGGCTTTGAGAAATTCAAGTGTAGGGTAAGGCC...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTACATGTCAGTATTTACTaGCTGGGGAGGTGGCCTTAC +
Preference number: 5 (lower is better)
Translates to: HFYLPTPLSAREQLLEALHVSIY*LGRWPY
Trigger: GTAAGGCCACCTCCCCAGCAAGTAAATACTGACATG...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CAGGAGAAACCAGGCACAAACTTCAAGATGTCCTCTCCCAGTGGAGCTGCACAGGAGACATCACTGACTTaGATATTCAGAGTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: QEKPGTNFKMSSPSGAAQETSLT*IFRVVK
Trigger: TTTTACCACTCTGAATATCAAAGTCAGTGATGTCTC...CTGTGCAGCTCCACTGGGAGAGGACATCTTGAAGTTTGTGCCTGGTTTCTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCCCTAAATTTGCCTGTTaGCCTTACCCACTTTCCATC +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCPKFAC*PYPLSI
Trigger: GATGGAAAGTGGGTAAGGCAAACAGGCAAATTTAGG...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCAGGCAGGGGAATCGCTaGAACCCAGGATGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFRQGNR*NPGCGG
Trigger: ACCTCCGCATCCTGGGTTCAAGCGATTCCCCTGCCT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCACAAGACACAATGTATaGTGTCCCTGGAGTTGTCTC +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCTRHNV*CPWSCL
Trigger: GAGACAACTCCAGGGACACAATACATTGTGTCTTGT...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAACATCACATTACCTTaGCACCAGGGAAGCATACTT +
Preference number: 5 (lower is better)
Translates to: ETLSTCSMAAPGSHILSINITLP*HQGSIL
Trigger: AAGTATGCTTCCCTGGTGCAAAGGTAATGTGATGTT...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCAGTCCACCATGTGCTaGTATCCAGGAATAAAGAAT +
Preference number: 5 (lower is better)
Translates to: PASEILASILAQWQHCWLQSTMC*YPGIKN
Trigger: ATTCTTTATTCCTGGATACAAGCACATGGTGGACTG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTACCCTGGCTACTAAATaGTCTGGTTCACATGCCATT +
Preference number: 5 (lower is better)
Translates to: LSTCSMAAPGSHILSIKITLATK*SGSHAI
Trigger: AATGGCATGTGAACCAGACAATTTAGTAGCCAGGGT...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGCTGAGTCAAGATGATTaGGTTGAGGTAGATACAGAC +
Preference number: 5 (lower is better)
Translates to: PASEILASILAQWQHCWLLSQDD*VEVDTD
Trigger: GTCTGTATCTACCTCAACCAAATCATCTTGACTCAG...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAACATCTTACTCCTTCTaGCCTTCCTGTCTGCCAATT +
Preference number: 5 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSTSYSF*PSCLPI
Trigger: AATTGGCAGACAGGAAGGCAAGAAGGAGTAAGATGT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTTGTTGCAAAGTTACTaGTTTTCCTTCCATGGCACC +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCLLQSY*FSFHGT
Trigger: GGTGCCATGGAAGGAAAACAAGTAACTTTGCAACAA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGACTCTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTTATTTTCATTCTCTGTaGGCACTTAGGGAAGGCATT +
Preference number: 5 (lower is better)
Translates to: ETLSTCSMAAPGSHILSIYFHSL*ALREGI
Trigger: AATGCCTTCCCTAAGTGCCAACAGAGAATGAAAATA...AATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAGAGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCATTAGGGAGTCTGCTCTaGGTCTTACAAGTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSLGSLL*VLQVQK
Trigger: CTTTTGGACTTGTAAGACCAAGAGCAGACTCCCTAA...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAGGCAGGAGGATTGCTaGGGCTCAGGAGTTCAAGGT +
Preference number: 5 (lower is better)
Translates to: KESKSSDTLIKTPYIILRRQEDC*GSGVQG
Trigger: ACCTTGAACTCCTGAGCCCAAGCAATCCTCCTGCCT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp CCTGCCTCTGAGATACTTGCTTCTATACTAGCACAATGGCAGCATTGTTGGTTGGGGCCTATACATGAGTaGATCAGAAATTTTATGGAC +
Preference number: 5 (lower is better)
Translates to: PASEILASILAQWQHCWLGPIHE*IRNFMD
Trigger: GTCCATAAAATTTCTGATCAACTCATGTATAGGCCC...CAACCAACAATGCTGCCATTGTGCTAGTATAGAAGCAAGTATCTCAGAGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTGTTACTACTCATGGTaGTGGCTCCCTTACAATTCT +
Preference number: 5 (lower is better)
Translates to: LSTCSMAAPGSHILSIKICYYSW*WLPYNS
Trigger: AGAATTGTAAGGGAGCCACAACCATGAGTAGTAACA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CTCTCTACATGCTCCATGGCAGCTCCAGGCTCACACATACTTAGTATTAAGATTTATTTAGATAGTGAGTaGGGGGTCCCCAAGATCATA +
Preference number: 5 (lower is better)
Translates to: LSTCSMAAPGSHILSIKIYLDSE*GVPKII
Trigger: TATGATCTTGGGGACCCCCAACTCACTATCTAAATA...AATCTTAATACTAAGTATGTGTGAGCCTGGAGCTGCCATGGAGCATGTAGAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCAAGCAGTGTCTGGCATTaGGTAACTCTCATTGTTGAA +
Preference number: 5 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSSSVWH*VTLIVE
Trigger: TTCAACAATGAGAGTTACCAAATGCCAGACACTGCT...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCTCACAGAGCGATTTATaGATGCAAAGGAACCGTTTT +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCSQSDL*MQRNRF
Trigger: AAAACGGTTCCTTTGCATCAATAAATCGCTCTGTGA...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGTGGCAGCATTGTTGGTaGTTCACCCCATCCCCATTC +
Preference number: 5 (lower is better)
Translates to: YDLFHDSETITPSNGSTKWQHCW*FTPSPF
Trigger: GAATGGGGATGGGGTGAACAACCAACAATGCTGCCA...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCCTGACCTGATCCACTaGCCTCAGACTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFPDLIH*PQTPKV
Trigger: CACTTTGGGAGTCTGAGGCAAGTGGATCAGGTCAGG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CAA 90 bp ATGTCAGTATTTACTTGCTGGGGAGGTGGCCTTACCCTACACTTGAATTTCTCATTCATACCTAACCAATaGGGCATCAAGAGACTTTAC +
Preference number: 5 (lower is better)
Translates to: MSVFTCWGGGLTLHLNFSFIPNQ*GIKRLY
Trigger: GTAAAGTCTCTTGATGCCCAATTGGTTAGGTATGAA...TGAGAAATTCAAGTGTAGGGTAAGGCCACCTCCCCAGCAAGTAAATACTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AGCACCTTAGGTAATTGTAATGAAAACGGCCCACAATGCAGGTTTGGGAACTGCCGTTCCATTAAAATGTaGATTGCCTTGGGAATAGAT +
Preference number: 5 (lower is better)
Translates to: STLGNCNENGPQCRFGNCRSIKM*IALGID
Trigger: ATCTATTCCCAAGGCAATCAACATTTTAATGGAACG...GCAGTTCCCAAACCTGCATTGTGGGCCGTTTTCATTACAATTACCTAAGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATTGGTACACTTCCCTTaGCCTTTTGGAGACATCACT +
Preference number: 5 (lower is better)
Translates to: AERFFTCTSESCIINSLQLVHFP*PFGDIT
Trigger: AGTGATGTCTCCAAAAGGCAAAGGGAAGTGTACCAA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAGATTTGCAAAACTGTaGTCGCCGCCAGGACGACTG +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIRFAKL*SPPGRL
Trigger: CAGTCGTCCTGGCGGCGACAACAGTTTTGCAAATCT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATGCAGTGGCACGATCTaGACTCACTCCAACCTCTAC +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRICSGTI*THSNLY
Trigger: GTAGAGGTTGGAGTGAGTCAAGATCGTGCCACTGCA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGTCACAGTCCCTAAATTaGCCTGTTTGCCTTACCCAC +
Preference number: 5 (lower is better)
Translates to: YDLFHDSETITPSNGSTKSQSLN*PVCLTH
Trigger: GTGGGTAAGGCAAACAGGCAAATTTAGGGACTGTGA...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGCCCACAATGCAGGTTaGGGAACTGCGTTAGATCAT +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFAHNAG*GTALDH
Trigger: ATGATCTAACGCAGTTCCCAAACCTGCATTGTGGGC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp CATTTTTACCTACCCACACCTCTCAGTGCTAGGGAGCAACTTTTAGAAGCACTATATAACTTAATCACTTaGACTCTGGTTGCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: HFYLPTPLSAREQLLEALYNLIT*TLVAPF
Trigger: GAAAGGAGCAACCAGAGTCAAAGTGATTAAGTTATA...TAGTGCTTCTAAAAGTTGCTCCCTAGCACTGAGAGGTGTGGGTAGGTAAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATGCAAAGGAACCGTTTaGGCTCATGTAAGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AERFFTCTSESCIINSLQCKGTV*AHVSEK
Trigger: CTTTTCACTTACATGAGCCAAAACGGTTCCTTTGCA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGGAGGAAAATGCATCTTaGCCATGCATGGGAAGCTTT +
Preference number: 5 (lower is better)
Translates to: YDLFHDSETITPSNGSTKEENAS*PCMGSF
Trigger: AAAGCTTCCCATGCATGGCAAAGATGCATTTTCCTC...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAGACTTCCCATGGGGTaGTTACTTGCTCCTCACTAT +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIRLPMG*LLAPHY
Trigger: ATAGTGAGGAGCAAGTAACAACCCCATGGGAAGTCT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGAACTTTGCACTAGTATaGAAGGCCATCTCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: YDLFHDSETITPSNGSTKNFALV*KAISSL
Trigger: AAGGGAAGAGATGGCCTTCAATACTAGTGCAAAGTT...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GCTGAGAGGTTTTTCACTTGTACCAGTGAGAGCTGCATCATTAATAGTCTTCAATGCACAATGCTTAGGTaGTTTATATTTGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: AERFFTCTSESCIINSLQCTMLR*FIFGSQ
Trigger: CTGACTTCCAAATATAAACAACCTAAGCATTGTGCA...TTGAAGACTATTAATGATGCAGCTCTCACTGGTACAAGTGAAAAACCTCTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCACTTCCCTTTGCCTTTaGGAGACATCACTGACTTTG +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFTSLCL*ETSLTL
Trigger: CAAAGTCAGTGATGTCTCCAAAAGGCAAAGGGAAGT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAACAAGTACAAAGATTaGCAAAACTGTTGTCGCCGC +
Preference number: 5 (lower is better)
Translates to: KESKSSDTLIKTPYIILRNKYKD*QNCCRR
Trigger: GCGGCGACAACAGTTTTGCAAATCTTTGTACTTGTT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACATTCTACCAACAAGTaGGGACTTCAAGTGGTAAAG +
Preference number: 5 (lower is better)
Translates to: KESKSSDTLIKTPYIILRHSTNK*GLQVVK
Trigger: CTTTACCACTTGAAGTCCCAACTTGTTGGTAGAATG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACCATGGGGTTGTTACTaGCTCCTCACTATAATCCAT +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIPWGCY*LLTIIH
Trigger: ATGGATTATAGTGAGGAGCAAGTAACAACCCCATGG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAGAGAGACAGCTTTGGTaGAAACCTAAAGAAGTGCTG +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIERQLW*KPKEVL
Trigger: CAGCACTTCTTTAGGTTTCAACCAAAGCTGTCTCTC...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACCAATGACTGCAACGTaGTCACCTCTTACAATGTAT +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIPMTAT*SPLTMY
Trigger: ATACATTGTAAGAGGTGACAACGTTGCAGTCATTGG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249299.7
ENST00000422760.1
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCAGTGACTATTCCTTTTaGCTCCATTACACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFSDYSF*LHYTAA
Trigger: AGCAGCTGTGTAATGGAGCAAAAAGGAATAGTCACT...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGACCAATCTCTCCCATATaGCTATGCATAGAGGAAAAT +
Preference number: 5 (lower is better)
Translates to: KESKSSDTLIKTPYIILRPISPI*LCIEEN
Trigger: ATTTTCCTCTATGCATAGCAATATGGGAGAGATTGG...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp AAGGAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAAAAATGTTGATTGCCTaGGGAATAGATGCTGTCACA +
Preference number: 5 (lower is better)
Translates to: KESKSSDTLIKTPYIILRKMLIA*GIDAVT
Trigger: TGTGACAGCATCTATTCCCAAGGCAATCAACATTTT...TCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCCATCGTTAAACTTTTaGCTATCCTCGAACGAGCAA +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFPSLNF*LSSNEQ
Trigger: TTGCTCGTTCGAGGATAGCAAAAAGTTTAACGATGG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGACATTGATGGGAATTaGATACCAGTTGTAGCAATG +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFDIDGN*IPVVAM
Trigger: CATTGCTACAACTGGTATCAAATTCCCATCAATGTC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATACAGTCCAGCCTAGTGTaGCTATTAAACTTTAGATGT +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIQSSLV*LLNFRC
Trigger: ACATCTAAAGTTTAATAGCAACACTAGGCTGGACTG...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TATGATTTGTTTCATGACTCTGAAACTATTACTCCCTCCAATGGCTCTACAAAGCAAAATGTCTCTTTATaGCTTGATTCTGCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: YDLFHDSETITPSNGSTKQNVSL*LDSAFL
Trigger: CAGGAAAGCAGAATCAAGCAATAAAGAGACATTTTG...CTTTGTAGAGCCATTGGAGGGAGTAATAGTTTCAGAGTCATGAAACAAATCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCCCTGGCCAATTACTCTaGAACTTTTATATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFPGQLL*NFYICL
Trigger: CAGACAGATATAAAAGTTCAAGAGTAATTGGCCAGG...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGCTTCTGATAGATGCTaGATAGCAGATTTTAAGACT +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFASDRC*IADFKT
Trigger: AGTCTTAAAATCTGCTATCAAGCATCTATCAGAAGC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCTGCAATAAAAAGGATTaGAGCCTTTACTGTACAGAG +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFCNKKD*SLYCTE
Trigger: CTCTGTACAGTAAAGGCTCAAATCCTTTTTATTGCA...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAAACACATGCAAAGTATaGCTAATAAGCTCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRINTCKV*LISSLE
Trigger: CTCAAGAGAGCTTATTAGCAATACTTTGCATGTGTT...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp TCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATAATCAGTTTCGCAGCTACTTATGATTaGTTTCATGACTCTGAAACT +
Preference number: 5 (lower is better)
Translates to: SSDTLIKTPYIILRIISFAATYD*FHDSET
Trigger: AGTTTCAGAGTCATGAAACAAATCATAAGTAGCTGC...GAAACTGATTATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249299.7
CDS-3UTR CAA 90 bp GAGTCAAAATCCAGTGACACACTCATAAAAACTCCATATATCATCCTCAGAATATTTCAAACTTTGGCCTaGGACTCTAGAAATATGTTC +
Preference number: 5 (lower is better)
Translates to: ESKSSDTLIKTPYIILRIFQTLA*DSRNMF
Trigger: GAACATATTTCTAGAGTCCAAGGCCAAAGTTTGAAA...TATTCTGAGGATGATATATGGAGTTTTTATGAGTGTGTCACTGGATTTTGACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS CCA 72 bp AGCAGCGGGAAGGCTCGAGGCGCCGCCGGCGAACTCTaGGTCGTTCCGGGGCCCTCATCTCCTCGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SSGKARGAAGEL*VVPGPSSPRPP
Trigger: GGGCGGGCGAGGAGATGAGGGCCCCGGAACGACCCAGAGTTCGCCGGCGGCGCCTCGAGCCTTCCCGCTGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422760.1
CDS GCA 72 bp TGCTGTTCGGCCCGGCGGTTCCGGGTAACGCAGCGGTaGCGACAGCAAGCAGAACTGAAAGGGCGCGCCAGA +
Preference number: 6 (lower is better)
Translates to: CCSARRFRVTQR*RQQAELKGRAR
Trigger: TCTGGCGCGCCCTTTCAGTTCTGCTTGCTGTCGGCACCGCTGCGTTACCCGGAACCGCCGGGCCGAACAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424702.1
CDS TCA 72 bp ATCCTAGTACCACTTGTTCTACCCCCTGTGAAGAGCTaGATACTCGTTCATGGCTTTCATCCAAAATCAAAT +
Preference number: 6 (lower is better)
Translates to: ILVPLVLPPVKS*ILVHGFHPKSN
Trigger: ATTTGATTTTGGATGAAAGCCATGAACGAGTATTCAGCTCTTCACAGGGGGTAGAACAAGTGGTACTAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000249299.7
ENST00000411938.1
ENST00000422760.1
ENST00000424702.1
CDS TCA 72 bp AAAACCTTTCAGTGTTCCCACAATCATTCTCCCATCTaGTGTAATAACGGCAACAGTTCGGTTGATGTAGTT +
Preference number: 6 (lower is better)
Translates to: KTFQCSHNHSPI*CNNGNSSVDVV
Trigger: AACTACATCAACCGAACTGTTGCCGTTATTACATCAGATGGGAGAATGATTGTGGGAACACTGAAAGGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249299.7
ENST00000424702.1
CDS CAA 72 bp ACACTTGTAAAGTCTATTTTAAGACTTCCCATGGGGTaGTTACTTGCTCCTCACTATAATCCATTACAACAG +
Preference number: 6 (lower is better)
Translates to: TLVKSILRLPMG*LLAPHYNPLQQ
Trigger: CTGTTGTAATGGATTATAGTGAGGAGCAAGTAACAACCCCATGGGAAGTCTTAAAATAGACTTTACAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422760.1