Pregenerated sensors for LSM7 (Homo sapiens)
Ensembl gene IDs: ENSG00000130332Ensembl transcript IDs: ENST00000252622.15, ENST00000585395.6, ENST00000585409.2, ENST00000587502.2, ENST00000589532.5, ENST00000591515.6, ENST00000591745.1
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGC | + |
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Preference number: 1 (lower is better) Translates to: QISTTDVPRHTTRPS*RVSSVSLYWSSGSR Trigger: GCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR TCA 90 bp | ACGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTaGGCTTGTACTGGTCGTCAGGGTCTCGCATGTACTCAATGGTGC | + |
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Preference number: 1 (lower is better) Translates to: TCPGTPRGPAAGCPP*ACTGRQGLACTQWC Trigger: GCACCATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR CCA 90 bp | TATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: YTKRKMLPFQEAVLR*EQQPSPRETELLGP Trigger: AGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| 3UTR TCA 90 bp | CGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCTTCAGGATTCCACTATAAGATGGGG | + |
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Preference number: 1 (lower is better) Translates to: RQGLACTQWCRPAQG*GVGRSPSGFHYKMG Trigger: CCCCATCTTATAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| 3UTR CCA 90 bp | GTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTATAAGATGGGGTCAGATG | + |
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Preference number: 1 (lower is better) Translates to: VSHVLNGAVQHKVEE*VEALQDSTIRWGQM Trigger: CATCTGACCCCATCTTATAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| 3UTR-3UTR GCA 90 bp | GGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: GTAVGAAAKSAGNRAARASRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...GGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VPRHTTRPSCRVSSVSLYRPAQG*GVGRSP Trigger: AGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACG...GTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTGCCTCCATGCCGTCCTaGGGGCAGATTAGCACCACG | + |
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Preference number: 2 (lower is better) Translates to: GGGTAVGAAAKSAGNRAAASMPS*GQISTT Trigger: CGTGGTGCTAATCTGCCCGCAGGACGGCATGGAGGC...AGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCTAGGCGTCCTGCTGCTGGATGAAGGGGTTGGGGATGGCCTCCATGCCGTCGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: RLGVLLLDEGVGDGLHAVEAVLR*EQQPSP Trigger: CGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC...GACGGCATGGAGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACGCCTAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR CCA 90 bp | GCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATG | + |
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Preference number: 2 (lower is better) Translates to: AVGAAAKSAGNRAARACPSVSLY*SSGSRM Trigger: CATGCGAGACCCTGACGACCAGTACAAGCTCACGGA...AGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCCTCGCATGTACTCAATaGTGCCGTCCAGCACAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GTAVGAAAKSAGNRAARALACTQ*CRPAQG Trigger: ACCTTGTGCTGGACGGCACCATTGAGTACATGCGAG...GGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: GRLAPRTCPGTPRGPAAGIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...CCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR GCA 90 bp | GCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: AVGAAAKSAGNRAARACPIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...AGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| 3UTR-3UTR GCA 90 bp | GTACTGGTCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VLVVRVSHVLNGAVQHKVSRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...AACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGACCAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR GCA 72 bp | CCATGCCGTCCTGCGGGCAGATTAGCACCACGGACGTaGCCCGGCACACCACGAGGCCCAGCTGCCGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: PCRPAGRLAPRT*PGTPRGPAAGC Trigger: ACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCCCGCAGGACGGCATGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR GCA 72 bp | ACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCA | + |
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Preference number: 3 (lower is better) Translates to: TTDVPRHTTRPS*RVSSVSLYWSS Trigger: TGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GGGTAVGAAAKSAGNRAAPSSTR*RSGSKP Trigger: GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGG...AGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR TCA 72 bp | GGCACACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTaGGCTTGTACTGGTCGTCAGGGTCTCGCATGTACT | + |
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Preference number: 3 (lower is better) Translates to: GTPRGPAAGCPP*ACTGRQGLACT Trigger: AGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR CCA 72 bp | AGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: RKMLPFQEAVLR*EQQPSPRETEL Trigger: CAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| 3UTR CCA 72 bp | AGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATGTACTCAATGGTGCCG | + |
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Preference number: 3 (lower is better) Translates to: RPSCRVSSVSLY*SSGSRMYSMVP Trigger: CGGCACCATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR CCA 72 bp | GTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTATAAGATGG | + |
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Preference number: 3 (lower is better) Translates to: VLNGAVQHKVEE*VEALQDSTIRW Trigger: CCATCTTATAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR TCA 90 bp | GTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGCAGGAAAGCAGAGCGCATaGGACCTGGAGCGCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: VGAAAKSAGNRAARACPAGKQSA*DLERGP Trigger: CGGGCCGCGCTCCAGGTCTCATGCGCTCTGCTTTCC...TGCAGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TGCCGTCCTGCGGGCAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CRPAGRLAPRTCPGTPRGTTRPS*RVSSVS Trigger: GCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT...GCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCCCGCAGGACGGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGCATTAGCACCACGGACGTaGCCCGGCACACCACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VGAAAKSAGNRAARACPALAPRT*PGTPRG Trigger: GCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAA...TGCAGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | CGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RWEQQPSPRETELLGPALSRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...CAGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | ACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCTCTTGTCGCGCCGTGTaGCTCTTCGCAGGCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: TAVGAAAKSAGNRAARACSCRAV*LFAGTA Trigger: GGCGGTGCCTGCGAAGAGCCACACGGCGCGACAAGA...GCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS-3UTR TCA 90 bp | TGCCGTCCTGCGGGCAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCGTCCTGCTGCTGGATaGAGGGGTTGGGGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: CRPAGRLAPRTCPGTPRGRPAAG*RGWGWP Trigger: AGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACG...GCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCCCGCAGGACGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | CAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGGCCTCCATGCCGTCCTaGGGGCAGATTAGCACCACG | + |
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Preference number: 4 (lower is better) Translates to: QISTTDVPRHTTRPSCRVASMPS*GQISTT Trigger: CGTGGTGCTAATCTGCCCGCAGGACGGCATGGAGGC...CACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR TCA 90 bp | GTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGCACGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VGAAAKSAGNRAARACPARPAQG*GVGRSP Trigger: AGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACG...TGCAGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR TCA 90 bp | AGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGCGTCCTGCTGCTGGATaGAGGGGTTGGGGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RRYCGGSSSQVRGKPSCSRPAAG*RGWGWP Trigger: AGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACG...CGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR TCA 90 bp | CGGCACACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGCGTCCTGCTGCTGGATaGAGGGGTTGGGGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHTTRPSCRVSSVSLYWSRPAAG*RGWGWP Trigger: AGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACG...CGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | ACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TRPSCRVSSVSLYWSSGSTTRPS*RVSSVS Trigger: GCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT...AGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | CGTCCTGCGGGCAGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCATGGGGATGGCCTCCATaGCGTCCTGCGGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: RPAGRLAPRTCPGTPRGPWGWPP*RPAGRL Trigger: TAATCTGCCCGCAGGACGGCATGGAGGCCATCCCCA...TGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCCCGCAGGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | GTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTGCATGGGGATGGCCTCCATaGCGTCCTGCGGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: VGAAAKSAGNRAARACPAWGWPP*RPAGRL Trigger: TAATCTGCCCGCAGGACGGCATGGAGGCCATCCCCA...TGCAGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | AGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RRYCGGSSSQVRGKPSCSSRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...CGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR TCA 90 bp | AGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGTCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RLAPRTCPGTPRGPAAGCRPAQG*GVGRSP Trigger: AGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACG...ACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR TCA 90 bp | GTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VLRWEQQPSPRETELLGPRPAQG*GVGRSP Trigger: AGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACG...AGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | AGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGTGGGGATGGCCTCCATaGCGTCCTGCGGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: RRYCGGSSSQVRGKPSCSWGWPP*RPAGRL Trigger: TAATCTGCCCGCAGGACGGCATGGAGGCCATCCCCA...CGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | GAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EAQLPGVLRELVLVVRVSSRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...CGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | GTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTCCTTCAGGATTCCACTaGCTTCGCGGCCTCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VLRWEQQPSPRETELLGPPSGFH*LRGLPG Trigger: TCCAGGGAGGCCGCGAAGCCAGTGGAATCCTGAAGG...AGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | GCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCTCTCGCATGTACTCAATaGTGCCGTCCAGCACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: AVGAAAKSAGNRAARACPLACTQ*CRPAQG Trigger: ACCTTGTGCTGGACGGCACCATTGAGTACATGCGAG...AGGGCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | GGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: GTAVGAAAKSAGNRAARAHKVEE*VEALQD Trigger: ATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTG...GGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATG | + |
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Preference number: 4 (lower is better) Translates to: EAVLRWEQQPSPRETELLSVSLY*SSGSRM Trigger: CATGCGAGACCCTGACGACCAGTACAAGCTCACGGA...GAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | ACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGACTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTC | + |
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Preference number: 4 (lower is better) Translates to: TTRPSCRVSSVSLYWSSGTSRPP*NFTRIV Trigger: GACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGT...CCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCTCGCATGTACTCAATaGTGCCGTCCAGCACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGGTAVGAAAKSAGNRAALACTQ*CRPAQG Trigger: ACCTTGTGCTGGACGGCACCATTGAGTACATGCGAG...AGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | ACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TTRPSCRVSSVSLYWSSGSVSLY*SSGSRM Trigger: CATGCGAGACCCTGACGACCAGTACAAGCTCACGGA...CCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | ACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGGGTAGGTCTCTAACATaGAGCCAAGGTGCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTRPSCRVSSVSLYWSSGGRSLT*SQGAPP Trigger: AGGAGGGGCACCTTGGCTCCATGTTAGAGACCTACC...CCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGCATGTACTCAATGGTGCCGGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSLYWSSGSRMYSMVPEAVLR*EQQPSP Trigger: CGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC...CGGCACCATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| 3UTR CAA 72 bp | ACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTaGTACTGGTCGTCAGGGTCTCGCATGTACTCAATG | + |
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Preference number: 4 (lower is better) Translates to: TTRPSCRVSSVS*YWSSGSRMYSM Trigger: CATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR TCA 90 bp | CGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTGGGTCGAAGCCCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMYSMVPSSTRLRSGSKPRPAQG*GVGRSP Trigger: AGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACG...GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR TCA 90 bp | TATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCACCAGCCTGACCAGTaGGCCCGCCCTCCTCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTKRKMLPFQEAVLRWEQHQPDQ*ARPPHG Trigger: CCCGTGAGGAGGGCGGGCTCACTGGTCAGGCTGGTG...CTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR GCA 90 bp | GCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AVLRWEQQPSPRETELLGIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...CCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | AGGCTAGGCGTCCTGCTGCTGGATGAAGGGGTTGGGGATGGCCTCCATGCCGTCCTCGCATGTACTCAATaGTGCCGTCCAGCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLGVLLLDEGVGDGLHAVLACTQ*CRPAQG Trigger: ACCTTGTGCTGGACGGCACCATTGAGTACATGCGAG...GACGGCATGGAGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACGCCTAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | TATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTKRKMLPFQEAVLRWEQTTRPS*RVSSVS Trigger: GCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT...CTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | GTACTGGTCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGCCTCCATGCCGTCCTaGGGGCAGATTAGCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLVVRVSHVLNGAVQHKVASMPS*GQISTT Trigger: CGTGGTGCTAATCTGCCCGCAGGACGGCATGGAGGC...AACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGACCAGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | TACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCAAGAGCGCATGAGACCTaGAGCGCGGCCCGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKKENASVPGGGTAVGAARAHET*SAARAP Trigger: TGGAGCTCGGGCCGCGCTCCAGGTCTCATGCGCTCT...TGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000587502.2 |
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| CDS-3UTR TCA 90 bp | TACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCAGCCGGGTGTCCTCCGTaGGCTTGTACTGGTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YKKENASVPGGGTAVGAAAGCPP*ACTGRQ Trigger: CTGACGACCAGTACAAGCTCACGGAGGACACCCGGC...TGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | AGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGTCTTGTCGATGTACTTaGACAAGTCCAAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRYCGGSSSQVRGKPSCSSCRCT*TSPRCS Trigger: AGAGCATCTTGGACTTGTCCAAGTACATCGACAAGA...CGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | CCTCCATGCCGTCCTGCGGGCAGATTAGCACCACGGACGTGCCCCGGCACACCATCTTGTCGATGTACTTaGACAAGTCCAAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPCRPAGRLAPRTCPGTPSCRCT*TSPRCS Trigger: AGAGCATCTTGGACTTGTCCAAGTACATCGACAAGA...TGGTGTGCCGGGGCACGTCCGTGGTGCTAATCTGCCCGCAGGACGGCATGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | GTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTTCTTGTCGATGTACTTaGACAAGTCCAAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRWEQQPSPRETELLGPSCRCT*TSPRCS Trigger: AGAGCATCTTGGACTTGTCCAAGTACATCGACAAGA...AGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | CTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LYKKENASVPGGGTAVGAEAVLR*EQQPSP Trigger: CGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC...TGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | CGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGCATGTACTCAATGTCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVSSVSLYWSSGSRMYSMSSRPP*NFTRIV Trigger: GACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGA...CATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR CCA 90 bp | AGATTAGCACCACGGACGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGTGATTCCACTATAAGATaGGGTCAGATGCAGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAPRTCPGTPRGPAAGCDSTIR*GQMQMF Trigger: GAACATCTGCATCTGACCCCATCTTATAGTGGAATC...ACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACGTCCGTGGTGCTAATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR TCA 90 bp | CAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGCGTCCTGCTGCTGGATaGAGGGGTTGGGGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPIQKGKCFRSRRRYCGGRPAAG*RGWGWP Trigger: AGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACG...CCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGGCCTCCATGCCGTCCTaGGGGCAGATTAGCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: YTKRKMLPFQEAVLRWEQASMPS*GQISTT Trigger: CGTGGTGCTAATCTGCCCGCAGGACGGCATGGAGGC...CTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | CAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGTCCAGGAGGCGGTACTaGGGTGGGAGCAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPIQKGKCFRSRRRYCGGSRRRY*GGSSSQ Trigger: TTGGCTGCTGCTCCCACCGCAGTACCGCCTCCTGGA...CCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | ATTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTACCACGAGGCCCAGCTaGCGGGTGTCCTCCGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQPIQKGKCFRSRRRYCGTTRPS*RVSSVS Trigger: GCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGT...ACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | CTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LYKKENASVPGGGTAVGAASRPP*NFTRIV Trigger: GACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGC...TGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | GTCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVRVSHVLNGAVQHKVEEHKVEE*VEALQD Trigger: ATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTG...CTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR CCA 90 bp | CTTGTACTGGTCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVVRVSHVLNGAVQHKSVSLY*SSGSRM Trigger: CATGCGAGACCCTGACGACCAGTACAAGCTCACGGA...CTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGACCAGTACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS-3UTR GCA 90 bp | TCAGATGCAGATGTTCAGGTCCTTGGCACCAGCCTGACCAGTGAGCCCGCCCTCATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDADVQVLGTSLTSEPALIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...GAGGGCGGGCTCACTGGTCAGGCTGGTGCCAAGGACCTGAACATCTGCATCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR CCA 90 bp | ATTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQPIQKGKCFRSRRRYCGEAVLR*EQQPSP Trigger: CGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC...ACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | AATTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGGAGGCGGTACTGCGGTaGGAGCAGCAGCCAAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NSTYTKRKMLPFQEAVLREAVLR*EQQPSP Trigger: CGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTC...CCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGTGGGGATGGCCTCCATaGCGTCCTGCGGGCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: FNLYKKENASVPGGGTAVWGWPP*RPAGRL Trigger: TAATCTGCCCGCAGGACGGCATGGAGGCCATCCCCA...CACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | TTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGCCTTCAGGATTCCACTaGCTTCGCGGCCTCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNLYKKENASVPGGGTAVPSGFH*LRGLPG Trigger: TCCAGGGAGGCCGCGAAGCCAGTGGAATCCTGAAGG...CACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | ATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IQKGKCFRSRRRYCGGSSHKVEE*VEALQD Trigger: ATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTG...GCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCATTCTTCTCCTTATCCTaGGGGGAAAGCAGAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKKENASVPGGGTAVGAAFFSLS*GESRAH Trigger: ATGCGCTCTGCTTTCCCCGCAGGATAAGGAGAAGAA...TGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | TCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGCTCGCATGTACTCAATaGTGCCGTCCAGCACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STYTKRKMLPFQEAVLRWLACTQ*CRPAQG Trigger: ACCTTGTGCTGGACGGCACCATTGAGTACATGCGAG...CCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | TTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGTCCGTGAGCTTGTACTaGTCGTCAGGGTCTCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FNLYKKENASVPGGGTAVSVSLY*SSGSRM Trigger: CATGCGAGACCCTGACGACCAGTACAAGCTCACGGA...CACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCAATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YKKENASVPGGGTAVGAAIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...TGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CCA 90 bp | ACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCAGTCTTGTCGATGTACTTaGACAAGTCCAAGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRKMLPFQEAVLRWEQQSCRCT*TSPRCS Trigger: AGAGCATCTTGGACTTGTCCAAGTACATCGACAAGA...CTGCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR GCA 90 bp | TCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGATACAAAAAGGAAAATaGTTCCGTTCCAGGAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: STYTKRKMLPFQEAVLRWIQKGK*FRSRRR Trigger: CCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT...CCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | ACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCTGCCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TAVGAAAKSAGNRAARACPSSTR*RSGSKP Trigger: GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGG...GCAGGCCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | GCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVLRWEQQPSPRETELLGPSSTR*RSGSKP Trigger: GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGG...CCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | GCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTCGGGGTGTCCTCCGTGAGCTaGTACTGGTCGTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVLRWEQQPSPRETELLGVSSVS*YWSSGS Trigger: AGACCCTGACGACCAGTACAAGCTCACGGAGGACAC...CCCGAGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | CGTGCCCCGGCACACCACGAGGCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTATCCTTATCCGCCATCTaGTCGCGCCGTGTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RAPAHHEAQLPGVLRELVSLSAI*SRRVAL Trigger: AAGAGCCACACGGCGCGACAAGATGGCGGATAAGGA...TACAAGCTCACGGAGGACACCCGGCAGCTGGGCCTCGTGGTGTGCCGGGGCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CCA 90 bp | GTGTGGGCCACAGGGTGCCGGTCACAGCTGCTGGCTCGGGCTGCCTaGGTGGAGGCAGCTTCGGTAATGAGTCCATGTGTGGCTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VWATGCRSQLLARAA*VEAASVMSPCVAEL Trigger: CAGTTCAGCCACACATGGACTCATTACCGAAGCTGCCTCCACCCAGGCAGCCCGAGCCAGCAGCTGTGACCGGCACCCTGTGGCCCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS CCA 90 bp | GAGGGGGTACCGACAGCGGGAGCCTCCTCACCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTCTTGTCGATGTACTTGGACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVPTAGASSPSRPP*NFTRIVLSMYLDKS Trigger: GGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGGTGAGGAGGCTCCCGCTGTCGGTACCCCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591745.1 |
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| CDS TCA 90 bp | CGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQGLACTQWCRPAQG*GVGRSPSGFHWLRG Trigger: GCCGCGAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS TCA 90 bp | CGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCTTCAGGATTCCACTTCGCGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQGLACTQWCRPAQG*GVGRSPSGFHFAAS Trigger: GGAGGCCGCGAAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CCA 90 bp | GTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTGGCTTCGCGGCCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSHVLNGAVQHKVEE*VEALQDSTGFAASL Trigger: CAGGGAGGCCGCGAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS CCA 90 bp | CTCACGGGGAGAGATGTGAGCACTGAGGTAGGTAGGTCTCTAACATaGAGCCAAGGTGCCCCTCCTCTGGAGTGTGGGCTAGGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGRDVSTEVGRSLT*SQGAPPLECGLGPV Trigger: CACAGGCCCTAGCCCACACTCCAGAGGAGGGGCACCTTGGCTCCATGTTAGAGACCTACCTACCTCAGTGCTCACATCTCTCCCCGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS-3UTR CAA 90 bp | GGAGGCGGTACTGCGGTGGGAGCAGCAGCCAAGTCCGCGGGAAACCGAGCTGCTTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGTAVGAAAKSAGNRAAFTRIV*SMYLDK Trigger: CTTGTCCAAGTACATCGACAAGACGATCCGGGTAAA...AGCAGCTCGGTTTCCCGCGGACTTGGCTGCTGCTCCCACCGCAGTACCGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | CGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGCATGTACTCAATGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVSSVSLYWSSGSRMYSMPSSTR*RSGSKP Trigger: GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGG...CATTGAGTACATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
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| CDS TCA 90 bp | CGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: RQGLACTQWCRPAQG*GVGRSPSGFHWLRT Trigger: CGTCCTCAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589532.5 |
||
| CDS CCA 90 bp | GTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTTCGCGGCCTCCCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSHVLNGAVQHKVEE*VEALQDSTSRPPWN Trigger: GTTCCAGGGAGGCCGCGAAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CCA 90 bp | TCCTCTGGAGTGTGGGCTAGGGCCTGTGACTCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTCTTGTCGATGTACTTGGACAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGVWARACDSSRPP*NFTRIVLSMYLDKS Trigger: GGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGAGTCACAGGCCCTAGCCCACACTCCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
||
| CDS-3UTR CAA 90 bp | GCCCAGCTGCCGGGTGTCCTCCGTGAGCTTGTACTGGTCGTCAGGGTCTCGCATGTCTTGTCGATGTACTaGGACAAGTCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQLPGVLRELVLVVRVSHVLSMY*DKSKML Trigger: GAGCATCTTGGACTTGTCCAAGTACATCGACAAGAC...ATGCGAGACCCTGACGACCAGTACAAGCTCACGGAGGACACCCGGCAGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
||
| CDS TCA 90 bp | CGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTaGGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQGLACTQWCRPAQG*GVGRSPSGFHWLGE Trigger: TTCTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
||
| CDS-3UTR CAA 90 bp | TCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTGGGTCGAAGCCCTTCAGGATTGTGTCCTCCGTGAGCTaGTACTGGTCGTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMVPSSTRLRSGSKPFRIVSSVS*YWSSGS Trigger: AGACCCTGACGACCAGTACAAGCTCACGGAGGACAC...AATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
||
| CDS CCA 90 bp | GTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTGGCTTGGAGAAATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VSHVLNGAVQHKVEE*VEALQDSTGLEKSP Trigger: CGGTGATTTCTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
||
| CDS-3UTR CAA 90 bp | ATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCGTGTCCTCCGTGAGCTaGTACTGGTCGTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IQKGKCFRSRRRYCGGSSVSSVS*YWSSGS Trigger: AGACCCTGACGACCAGTACAAGCTCACGGAGGACAC...GCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | CTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGTGTCCTCCGTGAGCTaGTACTGGTCGTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LYKKENASVPGGGTAVGAVSSVS*YWSSGS Trigger: AGACCCTGACGACCAGTACAAGCTCACGGAGGACAC...TGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS TCA 90 bp | AGACGCCAGACACAGAAGGCTGCGCACCGTGAGATCCCATTTCTATaGAATGTCCAGGACAGGCCAATCCACAAAGACAGGGAAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RRQTQKAAHREIPFL*NVQDRPIHKDREGM Trigger: CATCCCTTCCCTGTCTTTGTGGATTGGCCTGTCCTGGACATTTCATAGAAATGGGATCTCACGGTGCGCAGCCTTCTGTGTCTGGCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589532.5 |
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| CDS CCA 90 bp | ACAAGGTTGAGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTaGAGAAATCACCGGGGGAGAGAAAAGAGAAGGCATGAGATCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TRLRSGSKPFRIPLA*RNHRGREKRRHEIR Trigger: ACGGATCTCATGCCTTCTCTTTTCTCTCCCCCGGTGATTTCTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS-3UTR CAA 90 bp | AGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTGGGTCGTCTTGTCGATGTACTaGGACAAGTCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVSHVLNGAVQHKVEEWVVLSMY*DKSKML Trigger: GAGCATCTTGGACTTGTCCAAGTACATCGACAAGAC...GACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000585395.6 ENST00000585409.2 |
||
| CDS-3UTR CAA 90 bp | AATTCAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NSTYTKRKMLPFQEAVLRPSSTR*RSGSKP Trigger: GGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGG...CCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTGAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
||
| CDS-3UTR CAA 90 bp | ATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGAGCAGCGTCTTGTCGATGTACTaGGACAAGTCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IQKGKCFRSRRRYCGGSSVLSMY*DKSKML Trigger: GAGCATCTTGGACTTGTCCAAGTACATCGACAAGAC...GCTGCTCCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS-3UTR CAA 90 bp | CAACCTATACAAAAAGGAAAATGCTTCCGTTCCAGGAGGCGGTACTGCGGTGGGGTCTTGTCGATGTACTaGGACAAGTCCAAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPIQKGKCFRSRRRYCGGVLSMY*DKSKML Trigger: GAGCATCTTGGACTTGTCCAAGTACATCGACAAGAC...CCCACCGCAGTACCGCCTCCTGGAACGGAAGCATTTTCCTTTTTGTATAGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 |
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| CDS GCA 72 bp | TTCTGGCCGTGTGGGCCACAGGGTGCCGGTCACAGCTaGTGGCTCGGGCTGCCTGGGTGGAGGCAGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: FWPCGPQGAGHS*WLGLPGWRQLR Trigger: CCGAAGCTGCCTCCACCCAGGCAGCCCGAGCCAGCAGCTGTGACCGGCACCCTGTGGCCCACACGGCCAGAA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS GCA 72 bp | GGCCACAGGGTGCCGGTCACAGCTGCTGGCTCGGGCTaGCTGGGTGGAGGCAGCTTCGGTAATGAGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GHRVPVTAAGSG*LGGGSFGNESM Trigger: CATGGACTCATTACCGAAGCTGCCTCCACCCAGGCAGCCCGAGCCAGCAGCTGTGACCGGCACCCTGTGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS CCA 72 bp | ACAGGGTGCCGGTCACAGCTGCTGGCTCGGGCTGCCTaGGTGGAGGCAGCTTCGGTAATGAGTCCATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TGCRSQLLARAA*VEAASVMSPCV Trigger: CACACATGGACTCATTACCGAAGCTGCCTCCACCCAGGCAGCCCGAGCCAGCAGCTGTGACCGGCACCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS CCA 72 bp | TCTAACATGGAGCCAAGGTGCCCCTCCTCTGGAGTGTaGGCTAGGGCCTGTGACTCTTCGCGGCCTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SNMEPRCPSSGV*ARACDSSRPPW Trigger: CCAGGGAGGCCGCGAAGAGTCACAGGCCCTAGCCCACACTCCAGAGGAGGGGCACCTTGGCTCCATGTTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS TCA 72 bp | TGCAGATGTTCAGGTCCTTGGCACCAGCCTGACCAGTaGGCCCGCCCTCCTCACGGGGAGAGATGTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRCSGPWHQPDQ*ARPPHGERCEH Trigger: GTGCTCACATCTCTCCCCGTGAGGAGGGCGGGCTCACTGGTCAGGCTGGTGCCAAGGACCTGAACATCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS CCA 72 bp | GGACAGGCCAATCCACAAAGACAGGGAAGGGATGCGTaGGTGCCAGGGCCAGGGATGGGACAGGCAGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GQANPQRQGRDA*VPGPGMGQAVM Trigger: CATCACTGCCTGTCCCATCCCTGGCCCTGGCACCCACGCATCCCTTCCCTGTCTTTGTGGATTGGCCTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589532.5 |
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| CDS CCA 72 bp | CCGACAGCGGGAGCCTCCTCACCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTCTTGTCGATGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PTAGASSPSRPP*NFTRIVLSMYL Trigger: CAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGGTGAGGAGGCTCCCGCTGTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591745.1 |
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| CDS CAA 90 bp | TCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSRMYSMVPSSTR*RSGSKPFRIPLASR Trigger: CCGCGAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS CAA 90 bp | TCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCCTTCAGGATTCCACTTCGCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGSRMYSMVPSSTR*RSGSKPFRIPLRGL Trigger: GAGGCCGCGAAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CAA 90 bp | TCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSGSRMYSMVPSSTR*RSGSKPFRIPLAED Trigger: GTCCTCAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589532.5 |
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| CDS CCA 72 bp | GTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTGGCTTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLNGAVQHKVEE*VEALQDSTGFA Trigger: CGCGAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
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| CDS CCA 72 bp | GTGTGGGCTAGGGCCTGTGACTCTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTCTTGTCGATGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VWARACDSSRPP*NFTRIVLSMYL Trigger: CAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGAGTCACAGGCCCTAGCCCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS CCA 72 bp | GTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTTCGCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLNGAVQHKVEE*VEALQDSTSRP Trigger: AGGCCGCGAAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CAA 90 bp | TCGTCAGGGTCTCGCATGTACTCAATGGTGCCGTCCAGCACAAGGTaGAGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSGSRMYSMVPSSTR*RSGSKPFRIPLAWR Trigger: TCTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTACATGCGAGACCCTGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS CCA 72 bp | GTACTCAATGGTGCCGTCCAGCACAAGGTTGAGGAGTaGGTCGAAGCCCTTCAGGATTCCACTGGCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLNGAVQHKVEE*VEALQDSTGLE Trigger: CTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCTCAACCTTGTGCTGGACGGCACCATTGAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591515.6 |
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| CDS CCA 72 bp | AGAGATGTGAGCACTGAGGTAGGTAGGTCTCTAACATaGAGCCAAGGTGCCCCTCCTCTGGAGTGTGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RDVSTEVGRSLT*SQGAPPLECGL Trigger: TAGCCCACACTCCAGAGGAGGGGCACCTTGGCTCCATGTTAGAGACCTACCTACCTCAGTGCTCACATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000585395.6 |
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| CDS CCA 72 bp | GTCGAAGCCCTTCAGGATTCCACTTCGCGGCCTCCCTaGAACTTTACCCGGATCGTCTTGTCGATGTACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VEALQDSTSRPP*NFTRIVLSMYL Trigger: CAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGTGGAATCCTGAAGGGCTTCGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
||
| CDS CAA 72 bp | GCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASRPPWNFTRIV*SMYLDKSKMLS Trigger: GGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
||
| CDS CAA 72 bp | CCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSRPPWNFTRIV*SMYLDKSKMLS Trigger: GGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591745.1 |
||
| CDS CCA 72 bp | AGGAGTGGGTCGAAGCCCTTCAGGATTCCACTGGCTTaGAGAAATCACCGGGGGAGAGAAAAGAGAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSGSKPFRIPLA*RNHRGREKRRH Trigger: ATGCCTTCTCTTTTCTCTCCCCCGGTGATTTCTCCAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000591515.6 |
||
| CDS CAA 72 bp | TCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRPPWNFTRIV*SMYLDKSKMLS Trigger: GGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585395.6 |
||
| CDS CAA 72 bp | ACTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSRPPWNFTRIV*SMYLDKSKMLS Trigger: GGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000585409.2 |
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| CDS CAA 90 bp | GCCTCCTCACCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASSPSRPPWNFTRIV*SMYLDKSKMLSFFF Trigger: GAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGGTGAGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591745.1 |
||
| CDS CAA 90 bp | GCCTGTGACTCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ACDSSRPPWNFTRIV*SMYLDKSKMLSFFF Trigger: GAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGAGTCACAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585395.6 |
||
| CDS CAA 90 bp | ATTCCACTGGCTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IPLASRPPWNFTRIV*SMYLDKSKMLSFFF Trigger: GAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGCCAGTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000252622.15 ENST00000587502.2 |
||
| CDS CAA 90 bp | CAGGATTCCACTTCGCGGCCTCCCTGGAACTTTACCCGGATCGTCTaGTCGATGTACTTGGACAAGTCCAAGATGCTCTCCTTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QDSTSRPPWNFTRIV*SMYLDKSKMLSFFF Trigger: GAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGGAGGCCGCGAAGTGGAATCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000585409.2 |
||
| CDS TCA 72 bp | ACACAGAAGGCTGCGCACCGTGAGATCCCATTTCTATaGAATGTCCAGGACAGGCCAATCCACAAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: TQKAAHREIPFL*NVQDRPIHKDR Trigger: CCTGTCTTTGTGGATTGGCCTGTCCTGGACATTTCATAGAAATGGGATCTCACGGTGCGCAGCCTTCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589532.5 |
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| CDS CAA 72 bp | CCCTGGAACTTTACCCGGATCGTCTTGTCGATGTACTaGGACAAGTCCAAGATGCTCTCCTTTTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PWNFTRIVLSMY*DKSKMLSFFFF Trigger: GAAGAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 ENST00000591745.1 |
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| CDS CCA 72 bp | CCTGGAACTTTACCCGGATCGTCTTGTCGATGTACTTaGACAAGTCCAAGATGCTCTCCTTTTTCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PGTLPGSSCRCT*TSPRCSPFSSS Trigger: AGAAGAAGAAAAAGGAGAGCATCTTGGACTTGTCCAAGTACATCGACAAGACGATCCGGGTAAAGTTCCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000252622.15 ENST00000585395.6 ENST00000585409.2 ENST00000587502.2 ENST00000591745.1 |
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| CDS CAA 72 bp | AAAGAGGTGCTTCCGCATGCGTCCTCATCATCTCTGTaGCTGGGTTTATTTGAAATTTTTAAAGAGGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: KEVLPHASSSSL*LGLFEIFKEGV Trigger: TACCCCCTCTTTAAAAATTTCAAATAAACCCAGCAACAGAGATGATGAGGACGCATGCGGAAGCACCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000591745.1 |
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