Pregenerated sensors for LSM5 (Homo sapiens)
Ensembl gene IDs: ENSG00000106355Ensembl transcript IDs: ENST00000223084.7, ENST00000410044.5, ENST00000450169.7, ENST00000480956.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTGAGAGTGGACTGAGAAAGTCTACGAAGACATACAGCAAAGCATaGTCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: TESGLRKSTKTYSKA*STFSFLLTYNSTMC Trigger: GCACATCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATGTCTTCGTAGACTTTCTCAGTCCACTCTCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTTTCCTTGATTTGACCTaGGTCCTGGAGTTCTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: NLGGGGRVDIATRHTSLTFLDLT*VLEFLA Trigger: AGCTAAGAACTCCAGGACTCAGGTCAAATCAAGGAA...AGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCCCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR TCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGGTACTGAGAGTGGACTaGGAAAGTCTACGAAGACAT | + |
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Preference number: 2 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLVLRVD*ESLRRH Trigger: ATGTCTTCGTAGACTTTCTCAGTCCACTCTCAGTAC...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR GCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGCAACCTTCTCCTTTTTaGTTACCTACAATTCTACGA | + |
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Preference number: 2 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLQPSPF*LPTILR Trigger: TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTG...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGTTTCCAGTGAAGGTCTaGTTTGAGAAGTCAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVFPVKV*FEKSKS Trigger: GGACTTTGACTTCTCAAACCAGACCTTCACTGGAAA...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCGTGGACCTTTTCCAGTaGAGGTCTGGTTTGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HLSTSSITLQRRAHNKVGVDLFQ*RSGLRS Trigger: ACTTCTCAAACCAGACCTTCACTGGAAAAGGTCCAC...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| 3UTR-3UTR CCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGGCACAAACTTTTTCTTaGCAACACAATATATACCCT | + |
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Preference number: 2 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLAQTFS*QHNIYP Trigger: AGGGTATATATTGTGTTGCCAAGAAAAAGTTTGTGC...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR TCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGTGAAGGTCTGGTTTaGGAAGTCAAAGTCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSSEGLV*EVKVLA Trigger: GGCAAGGACTTTGACTTCTCAAACCAGACCTTCACT...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| 3UTR-3UTR TCA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAATCAGTTCCTTGATTTaGCCTGAGTCCTGGAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HTAKHDQPSPFCLPTILRISSLI*PESWSS Trigger: AGAACTCCAGGACTCAGGTCAAATCAAGGAACTGAT...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGACTGAGAAAGTCTACGAAGACATACAGCAAAGCATGATCAACCTTCTCTGTTCCACTGGCTACTaGAGTAGAATAAACAAAATG | + |
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Preference number: 2 (lower is better) Translates to: EWTEKVYEDIQQSMINLLCSTGY*SRINKM Trigger: CATTTTGTTTATTCTACTGCAGTAGCCAGTGGAACA...GAGAAGGTTGATCATGCTTTGCTGTATGTCTTCGTAGACTTTCTCAGTCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR TCA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAGGAACAACTTTTGTTTaGGAATCAAATGGTCACGTA | + |
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Preference number: 2 (lower is better) Translates to: HTAKHDQPSPFCLPTILRGTTFV*ESNGHV Trigger: TACGTGACCATTTGATTCTCAAACAAAAGTTGTTCC...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR CCA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGATCTCCACTCATTTCCTaGCAATTCAGTAATAACTAC | + |
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Preference number: 2 (lower is better) Translates to: HTAKHDQPSPFCLPTILRSPLIS*QFSNNY Trigger: GTAGTTATTACTGAATTGCCAGGAAATGAGTGGAGA...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR TCA 72 bp | GAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTaGCTGGAGGTTGCAGGGAGCCAAGATCATGCCACT | + |
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Preference number: 3 (lower is better) Translates to: EVALISRQGTPA*LEVAGSQDHAT Trigger: AGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTAGTGATCATTTCCGGTaGTTTAAATGCACCTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: GGGGRVDIATRHTSLTGGSDHFR*FKCTCS Trigger: TGAACAGGTGCATTTAAACAACCGGAAATGATCACT...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR CAA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGGGCACAAACTTTTTCTaGGCAACACAATATATACCC | + |
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Preference number: 3 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLGTNFF*ATQYIP Trigger: GGGTATATATTGTGTTGCCAAGAAAAAGTTTGTGCC...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR-3UTR CAA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTGAGAAGTCAAAGTCCTaGCCTGGAGGAGCCCGACCA | + |
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Preference number: 3 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSEKSKS*PGGARP Trigger: TGGTCGGGCTCCTCCAGGCAAGGACTTTGACTTCTC...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGACTGAGAAAGTCTACGAAGACATACAGCAAAGCATGATCAACCTTCTCTGGAACAACTTTTGTTaGAGAATCAAATGGTCACGT | + |
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Preference number: 3 (lower is better) Translates to: EWTEKVYEDIQQSMINLLWNNFC*RIKWSR Trigger: ACGTGACCATTTGATTCTCAAACAAAAGTTGTTCCA...GAGAAGGTTGATCATGCTTTGCTGTATGTCTTCGTAGACTTTCTCAGTCCACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | AACCTGGGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGCAGGACAATCACTTaGACCTGGGAGGCGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NLGGGGRVDIATRHTSLTGRTIT*TWEAEV Trigger: GACCTCCGCCTCCCAGGTTCAAGTGATTGTCCTGCC...AGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCCCAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR GCA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTTCTAAGGGCAGCAGCTaGGACGGGTTGGTAGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: GGGGRVDIATRHTSLTGGSKGSS*DGLVVA Trigger: CGCTACTACCAACCCGTCGCAGCTGCTGCCCTTAGA...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR GCA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTAGCCTGACTGGAGGTTaGAGGGAGCCAAGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: GGGGRVDIATRHTSLTGGSLTGG*REPRSC Trigger: GCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCT...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR GCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCCACTCGGCCAGGGCCTaGCTCGGAACAGCCCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: HLSTSSITLQRRAHNKVGHSARA*LGTAPR Trigger: CCGAGGGGCTGTTCCGAGGCAGGCCCTGGCCGAGTG...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGCAGGCTCGACCAATCTaGGGCCGAGCGCACGATCTA | + |
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Preference number: 4 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVQARPI*GRAHDL Trigger: TAGATCGTGCGCTCGGCCTCAGATTGGTCGAGCCTG...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGCACGATCTAGTCAGCTaGGTGGGTCGCGTTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVHDLVS*VGRVHW Trigger: CCAGTGAACGCGACCCACGCAGCTGACTAGATCGTG...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | AACCTGGGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTAGGGAGCCAAGATCATaGCACTGCATTCCAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: NLGGGGRVDIATRHTSLTREPRS*HCIPVR Trigger: TCTCACTGGAATGCAGTGGCATGATCTTGGCTCCCT...AGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCCCAGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGCTGTCGCGAAGACTTaGAGCTCAGAGTCGAACCGC | + |
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Preference number: 4 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVAVAKT*SSESNR Trigger: GCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGC...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGAGAGCAGGTGCGGCCTaGTGTCGCGAAGACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQRAGAA*CREDLE Trigger: CTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCT...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCCCTAAGGGCAGCAGCTaGGACGGGTTGGTAGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: HLSTSSITLQRRAHNKVGPKGSS*DGLVVA Trigger: CGCTACTACCAACCCGTCGCAGCTGCTGCCCTTAGG...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGTTCCTTGATTTGACCTaGGTCCTGGAGTTCTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLFLDLT*VLEFLA Trigger: AGCTAAGAACTCCAGGACTCAGGTCAAATCAAGGAA...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGATCAGTTCCTTGATTTaGCCTGAGTCCTGGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLISSLI*PESWSS Trigger: AGAACTCCAGGACTCAGGTCAAATCAAGGAACTGAT...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGTGGCTACGCCGGAAGTaGCCTGCCTTCATTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQWLRRK*PAFIDG Trigger: ACCATCAATGAAGGCAGGCCACTTCCGGCGTAGCCA...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGGTGGCCTGCCTTCATTaGTGGTGGGACGACTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQVACLH*WWDDFE Trigger: TTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCAC...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | GAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTGTGGACCTTTTCCAGTaGAGGTCTGGTTTGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: EAGSQQSRPTTRSLNVDLVDLFQ*RSGLRS Trigger: ACTTCTCAAACCAGACCTTCACTGGAAAAGGTCCAC...AAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTCTCTTCATCACGATGTaGATTCTTGATCCTATACAT | + |
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Preference number: 4 (lower is better) Translates to: GGGGRVDIATRHTSLTGGLFITM*ILDPIH Trigger: ATGTATAGGATCAAGAATTCACATCGTGATGAAGAG...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGAATATAAAAATTAGATaGGAGTGGTGGCGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLNIKIR*EWWRPP Trigger: AGGTGGGCGCCACCACTCCCATCTAATTTTTATATT...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTGTTTTCCAATCCACGTaGACCAAATACAAAAACCAT | + |
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Preference number: 4 (lower is better) Translates to: GGGGRVDIATRHTSLTGGVFQST*TKYKNH Trigger: ATGGTTTTTGTATTTGGTCCACGTGGATTGGAAAAC...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGGCAAGTGAGATCCGGTaGAATATTTCCTGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQASEIR*NISCPL Trigger: CAGTGGGCAGGAAATATTTCACCGGATCTCACTTGC...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCATGGTGGGACGACTTTaGAAAGCGCGCTTCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HLSTSSITLQRRAHNKVGMVGRL*KARFRF Trigger: AAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCAT...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGACATACAGCAAAGCATaGTCAACCTTCTCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLTYSKA*STFSFL Trigger: CAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATGT...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGGGAACAACTTTTGTTTaGGAATCAAATGGTCACGTA | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLGTTFV*ESNGHV Trigger: TACGTGACCATTTGATTCTCAAACAAAAGTTGTTCC...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR GCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTTCAGCTCCCTGTTCCTaGTCCCCAAAGGACGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSSAPCS*SPKDGD Trigger: ATCGCCGTCCTTTGGGGAGCAGGAACAGGGAGCTGA...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGTGTTCCACTGGCTACTaGAGTAGAATAAACAAAATG | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLCSTGY*SRINKM Trigger: CATTTTGTTTATTCTACTGCAGTAGCCAGTGGAACA...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGTCTCCACTCATTTCCTaGCAATTCAGTAATAACTAC | + |
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Preference number: 4 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLSPLIS*QFSNNY Trigger: GTAGTTATTACTGAATTGCCAGGAAATGAGTGGAGA...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCAGTGAAGGTCTGGTTTaGGAAGTCAAAGTCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: HLSTSSITLQRRAHNKVGSEGLV*EVKVLA Trigger: GGCAAGGACTTTGACTTCTCAAACCAGACCTTCACT...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR GCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTACGTTAAAGAGCAGGTaGGGCCTGCTGTCGCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSTLKSR*GLLSRR Trigger: TCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGT...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTGTCAAAGTCCTTGCCTaGAGGAGCCCGACCACGTTA | + |
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Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSVKVLA*RSPTTL Trigger: TAACGTGGTCGGGCTCCTCCAGGCAAGGACTTTGAC...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCTTTTTCCCCGGCAAGTaGGATCCGGTGAAATATTTC | + |
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Preference number: 4 (lower is better) Translates to: HLSTSSITLQRRAHNKVGFFPGK*DPVKYF Trigger: GAAATATTTCACCGGATCTCACTTGCCGGGGAAAAA...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CCA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGTTTCCAGTGAAGGTCTaGTTTGAGAAGTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQFPVKV*FEKSKS Trigger: GGACTTTGACTTCTCAAACCAGACCTTCACTGGAAA...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTTGTTCCTGTAACGTTTaGGTCTTCTTCCCCCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSCSCNV*VFFPRK Trigger: TTTACGGGGGAAGAAGACTCAAACGTTACAGGAACA...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTATATTTCCTGCCCACTaGACATTTTACCATCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSIFPAH*TFYHLG Trigger: GCCGAGATGGTAAAATGTCCAGTGGGCAGGAAATAT...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTGAGTCGAACCGCATTTaGTCTTATACATTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSESNRI*SYTFPH Trigger: GTGGGGAAATGTATAAGACCAAATGCGGTTCGACTC...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CCA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAAAAATTAGATGGGAGTaGTGGCGCCCACCTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: HTAKHDQPSPFCLPTILRKIRWE*WRPPVI Trigger: GATTACAGGTGGGCGCCACCACTCCCATCTAATTTT...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR TCA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTCTCTTCATCACGATGTaGATTCTTGATCCTATACAT | + |
|
Preference number: 4 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSLFITM*ILDPIH Trigger: ATGTATAGGATCAAGAATTCACATCGTGATGAAGAG...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR TCA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAGTACTGAGAGTGGACTaGGAAAGTCTACGAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HTAKHDQPSPFCLPTILRVLRVD*ESLRRH Trigger: ATGTCTTCGTAGACTTTCTCAGTCCACTCTCAGTAC...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR GCA 90 bp | GAGTGGACTGAGAAAGTCTACGAAGACATACAGCAAAGCATGATCAACCTTCTCCAACCTTCTCCTTTTTaGTTACCTACAATTCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: EWTEKVYEDIQQSMINLLQPSPF*LPTILR Trigger: TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTG...GAGAAGGTTGATCATGCTTTGCTGTATGTCTTCGTAGACTTTCTCAGTCCACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CCA 90 bp | GAGTGGACTGAGAAAGTCTACGAAGACATACAGCAAAGCATGATCAACCTTCTCGCACAAACTTTTTCTTaGCAACACAATATATACCCT | + |
|
Preference number: 4 (lower is better) Translates to: EWTEKVYEDIQQSMINLLAQTFS*QHNIYP Trigger: AGGGTATATATTGTGTTGCCAAGAAAAAGTTTGTGC...GAGAAGGTTGATCATGCTTTGCTGTATGTCTTCGTAGACTTTCTCAGTCCACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| 3UTR CAA 72 bp | CTCCTGGCAAAAATATACATTGGCACAAACTTTTTCTaGGCAACACAATATATACCCTTTGATCTTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLAKIYIGTNFF*ATQYIPFDLTH Trigger: ATGTGTAAGATCAAAGGGTATATATTGTGTTGCCAAGAAAAAGTTTGTGCCAATGTATATTTTTGCCAGGAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS TCA 90 bp | AGCGCGCTTCCGCTTTTTCCGCAGCCCAAACAGGCTCGACCAATCTaGGGCCGAGCGCACGATCTAGTCAGCTGCGTGGGTCGCGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SALPLFPQPKQARPI*GRAHDLVSCVGRVH Trigger: GTGAACGCGACCCACGCAGCTGACTAGATCGTGCGCTCGGCCTCAGATTGGTCGAGCCTGTTTGGGCTGCGGAAAAAGCGGAAGCGCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 90 bp | CTGTTCCTGCTCCCCAAAGGACGGCGATTACCTAAGGGCAGCAGCTaGGACGGGTTGGTAGTAGCGTTAGCCGCCATGGCTACGCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLPKGRRLPKGSS*DGLVVALAAMATPE Trigger: TTCCGGCGTAGCCATGGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCTGCCCTTAGGTAATCGCCGTCCTTTGGGGAGCAGGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 90 bp | GTCAAAGTCCTTGCCTGGAGGAGCCCGACCACGTTAAAGAGCAGGTaGGGCCTGCTGTCGCGAAGACTTGGAGCTCAGAGTCGAACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VKVLAWRSPTTLKSR*GLLSRRLGAQSRTA Trigger: TGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGTGGTCGGGCTCCTCCAGGCAAGGACTTTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS TCA 90 bp | GGCTACGCCGGAAGTGGCCTGCCTTCATTGATGGTGGGACGACTTTaGAAAGCGCGCTTCCGCTTTTTCCGCAGCCCAAACAGGCTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GYAGSGLPSLMVGRL*KARFRFFRSPNRLD Trigger: GTCGAGCCTGTTTGGGCTGCGGAAAAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCCGGCGTAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 90 bp | TTTGTCCACAAGCTCTGGAGGAGCCCGACCACGTTAAAGAGCAGGTaGGGCCTGCTGTCGCGAAGACTTGGAGCTCAGAGTCGAACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVHKLWRSPTTLKSR*GLLSRRLGAQSRTA Trigger: TGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGTGGTCGGGCTCCTCCAGAGCTTGTGGACAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410044.5 |
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| CDS CCA 90 bp | CGGCCTGCTGTCGCGAAGACTTGGAGCTCAGAGTCGAACCGCATTTaGTCTTATACATTTCCCCACACTCGGCCAGGGCCTGCCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPAVAKTWSSESNRI*SYTFPHTRPGPASE Trigger: TTCCGAGGCAGGCCCTGGCCGAGTGTGGGGAAATGTATAAGACCAAATGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223084.7 ENST00000410044.5 |
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| CDS-3UTR CAA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGAGCAGCTGCGACGGGTaGGTAGTAGCGTTAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVSSCDG*VVALAA Trigger: GGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCT...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS TCA 90 bp | GTAGCGTTAGCCGCCATGGCTACGCCGGAAGTGGCCTGCCTTCATTaGTGGTGGGACGACTTTGAAAAGCGCGCTTCCGCTTTTTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VALAAMATPEVACLH*WWDDFEKRASAFSA Trigger: TGCGGAAAAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCCGGCGTAGCCATGGCGGCTAACGCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGTGCTGTCGCGAAGACTaGGAGCTCAGAGTCGAACCG | + |
|
Preference number: 5 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVCCRED*ELRVEP Trigger: CGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCA...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS CCA 90 bp | CCCGACCACGTTAAAGAGCAGGTGCGGCCTGCTGTCGCGAAGACTTaGAGCTCAGAGTCGAACCGCATTTGGTCTTATACATTTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PDHVKEQVRPAVAKT*SSESNRIWSYTFPH Trigger: GTGGGGAAATGTATAAGACCAAATGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGTGGTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223084.7 ENST00000410044.5 |
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| CDS-3UTR CAA 90 bp | GAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTGATGGTGGGACGACTTaGAAAAGCGCGCTTCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EAGSQQSRPTTRSLNVDLDGGTT*KSALPL Trigger: AAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATC...AAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | CATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGGCGAGAAGTCAAAGTCCTaGCCTGGAGGAGCCCGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HLSTSSITLQRRAHNKVGEKSKS*PGGARP Trigger: TGGTCGGGCTCCTCCAGGCAAGGACTTTGACTTCTC...GCCTACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | GACAAGGCACACCAGCCTGACTGGAGGTTGCAGGGAGCCAAGATCATGCCACTGCTTGATCCTATACATTaGTCCACAAGCTCTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DKAHQPDWRLQGAKIMPLLDPIH*STSSKG Trigger: GCCCTTAGAGCTTGTGGACAAATGTATAGGATCAAG...CAGTGGCATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTGGTGTGCCTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CAA 90 bp | GGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTGGAGGTGGCACAAACTTTTTCTaGGCAACACAATATATACCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGGRVDIATRHTSLTGGGTNFF*ATQYIP Trigger: GGGTATATATTGTGTTGCCAAGAAAAAGTTTGTGCC...ACCTCCAGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CAA 90 bp | GGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGGACCTTTTCCAGTCTTCCCCCGTAAAGTaGCATTTCCTCTCAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQQSRPTTRSLNVDLFQSSPVK*HFLSSQ Trigger: CTGGCTTGAGAGGAAATGCAACTTTACGGGGGAAGA...CTGGAAAAGGTCCACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | AACCTGGGAGGCGGAGGTCGCGTTGATATCGCGACAAGGCACACCAGCCTGACTTGGAACAACTTTTGTTaGAGAATCAAATGGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: NLGGGGRVDIATRHTSLTWNNFC*RIKWSR Trigger: ACGTGACCATTTGATTCTCAAACAAAAGTTGTTCCA...AGTCAGGCTGGTGTGCCTTGTCGCGATATCAACGCGACCTCCGCCTCCCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CAA 90 bp | ACTGCAGAGGCGGGCTCACAACAAAGTAGGCCGACGACGCGTTCACTAAATGTGATACCCATAATGCCCTaGAAGTTTTGGAGAGACGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAEAGSQQSRPTTRSLNVIPIMP*KFWRDV Trigger: AACGTCTCTCCAAAACTTCAAGGGCATTATGGGTAT...CACATTTAGTGAACGCGTCGTCGGCCTACTTTGTTGTGAGCCCGCCTCTGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAAGCAGCTGCGACGGGTaGGTAGTAGCGTTAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HTAKHDQPSPFCLPTILRSSCDG*VVALAA Trigger: GGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCT...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CAA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGACAGCCTGACTGGAGGTaGCAGGGAGCCAAGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: HTAKHDQPSPFCLPTILRQPDWR*QGAKIM Trigger: CATGATCTTGGCTCCCTGCAACCTCCAGTCAGGCTG...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS-3UTR CAA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTAGAGTCGAACCGCATTaGGTCTTATACATTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSRVEPH*VLYISP Trigger: TGGGGAAATGTATAAGACCAAATGCGGTTCGACTCT...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | TATACATTTGTCCACAAGCTCTATAACACTGCAGAGGCGGGCTCACAACAAAGTCTTGATCCTATACATTaGTCCACAAGCTCTATAACA | + |
|
Preference number: 5 (lower is better) Translates to: YTFVHKLYNTAEAGSQQSLDPIH*STSSIT Trigger: TGTTATAGAGCTTGTGGACAAATGTATAGGATCAAG...ACTTTGTTGTGAGCCCGCCTCTGCAGTGTTATAGAGCTTGTGGACAAATGTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS-3UTR CAA 90 bp | CATACAGCAAAGCATGATCAACCTTCTCCTTTTTGCTTACCTACAATTCTACGAAGTGATCATTTCCGGTaGTTTAAATGCACCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HTAKHDQPSPFCLPTILRSDHFR*FKCTCS Trigger: TGAACAGGTGCATTTAAACAACCGGAAATGATCACT...TCGTAGAATTGTAGGTAAGCAAAAAGGAGAAGGTTGATCATGCTTTGCTGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000450169.7 |
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| CDS TCA 72 bp | CCGCTTTTTCCGCAGCCCAAACAGGCTCGACCAATCTaGGGCCGAGCGCACGATCTAGTCAGCTGCGTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLFPQPKQARPI*GRAHDLVSCVG Trigger: ACCCACGCAGCTGACTAGATCGTGCGCTCGGCCTCAGATTGGTCGAGCCTGTTTGGGCTGCGGAAAAAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS TCA 72 bp | GCCGCCATGGCTACGCCGGAAGTGGCCTGCCTTCATTaGTGGTGGGACGACTTTGAAAAGCGCGCTTCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAMATPEVACLH*WWDDFEKRASA Trigger: AGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCCGGCGTAGCCATGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 72 bp | CTCCCCAAAGGACGGCGATTACCTAAGGGCAGCAGCTaGGACGGGTTGGTAGTAGCGTTAGCCGCCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPKGRRLPKGSS*DGLVVALAAMA Trigger: AGCCATGGCGGCTAACGCTACTACCAACCCGTCGCAGCTGCTGCCCTTAGGTAATCGCCGTCCTTTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 72 bp | CTTGCCTGGAGGAGCCCGACCACGTTAAAGAGCAGGTaGGGCCTGCTGTCGCGAAGACTTGGAGCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LAWRSPTTLKSR*GLLSRRLGAQS Trigger: ACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGTGGTCGGGCTCCTCCAGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS GCA 72 bp | AAGCTCTGGAGGAGCCCGACCACGTTAAAGAGCAGGTaGGGCCTGCTGTCGCGAAGACTTGGAGCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: KLWRSPTTLKSR*GLLSRRLGAQS Trigger: ACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAACGTGGTCGGGCTCCTCCAGAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000410044.5 |
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| CDS CAA 90 bp | TGGCTACGCCGGAAGTGGCCTGCCTTCATTGATGGTGGGACGACTTaGAAAAGCGCGCTTCCGCTTTTTCCGCAGCCCAAACAGGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WLRRKWPAFIDGGTT*KSALPLFPQPKQAR Trigger: TCGAGCCTGTTTGGGCTGCGGAAAAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCCGGCGTAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS TCA 72 bp | GGAAGTGGCCTGCCTTCATTGATGGTGGGACGACTTTaGAAAGCGCGCTTCCGCTTTTTCCGCAGCCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSGLPSLMVGRL*KARFRFFRSPN Trigger: GTTTGGGCTGCGGAAAAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS CCA 72 bp | GTCGCGAAGACTTGGAGCTCAGAGTCGAACCGCATTTaGTCTTATACATTTCCCCACACTCGGCCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VAKTWSSESNRI*SYTFPHTRPGP Trigger: AGGCCCTGGCCGAGTGTGGGGAAATGTATAAGACCAAATGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000223084.7 ENST00000410044.5 |
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| CDS CAA 72 bp | CGGAAGTGGCCTGCCTTCATTGATGGTGGGACGACTTaGAAAAGCGCGCTTCCGCTTTTTCCGCAGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RKWPAFIDGGTT*KSALPLFPQPK Trigger: TTTGGGCTGCGGAAAAAGCGGAAGCGCGCTTTTCAAAGTCGTCCCACCATCAATGAAGGCAGGCCACTTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223084.7 |
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| CDS CCA 72 bp | GTTAAAGAGCAGGTGCGGCCTGCTGTCGCGAAGACTTaGAGCTCAGAGTCGAACCGCATTTGGTCTTATACA | + |
|
Preference number: 6 (lower is better) Translates to: VKEQVRPAVAKT*SSESNRIWSYT Trigger: TGTATAAGACCAAATGCGGTTCGACTCTGAGCTCCAAGTCTTCGCGACAGCAGGCCGCACCTGCTCTTTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223084.7 ENST00000410044.5 |
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| CDS CAA 72 bp | CTGTCCCCTGCACTCCACGTTCCCATTTTCTCCAGATaGTCAGTATCTATTTACAATTCCCAACGTCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSPALHVPIFSR*SVSIYNSQRHQ Trigger: TTGATGACGTTGGGAATTGTAAATAGATACTGACAATCTGGAGAAAATGGGAACGTGGAGTGCAGGGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480956.1 |
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| CDS CAA 90 bp | CACCTTTGCCTGTCCCCTGCACTCCACGTTCCCATTTTCTCCAGATaGTCAGTATCTATTTACAATTCCCAACGTCATCAATTAATACTT | + |
|
Preference number: 6 (lower is better) Translates to: HLCLSPALHVPIFSR*SVSIYNSQRHQLIL Trigger: AAGTATTAATTGATGACGTTGGGAATTGTAAATAGATACTGACAATCTGGAGAAAATGGGAACGTGGAGTGCAGGGGACAGGCAAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480956.1 |
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