Pregenerated sensors for LSM12 (Homo sapiens)
Ensembl gene IDs: ENSG00000161654Ensembl transcript IDs: ENST00000293406.8, ENST00000591247.6
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGCTCGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATaGTTCTATGTATGTGACTACAGCCTTTTCCCCACACTCCACCTA | + |
|
Preference number: 1 (lower is better) Translates to: LSSPTICASKQSCNK*FYVCDYSLFPTLHL Trigger: TAGGTGGAGTGTGGGGAAAAGGCTGTAGTCACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCGAGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCTCCCCTGGGGCCTCTaGAGGACGCACAAACCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVLPWGL*RTHKPE Trigger: CTCAGGTTTGTGCGTCCTTCAGAGGCCCCAGGGGAG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGATGAGTCCTCGGGGGTaGAAAGAGAGGGTAAATAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVMSPRG*KERVNS Trigger: ACTATTTACCCTCTCTTTTCACCCCCGAGGACTCAT...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCATTATATTTCTGGATaGGTCCTCGGGGGTGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVHYISG*VLGGEK Trigger: CTTTTCACCCCCGAGGACTCATCCAGAAATATAATG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCACCACTCCAAACCCTaGACCCCCATCTTAAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVHHSKP*TPILNY Trigger: ATAATTTAAGATGGGGGTCCAGGGTTTGGAGTGGTG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR-3UTR CAA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGTCAGACAGACATACCTaGGATCCTCTCCCCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVSDRHT*DPLPWG Trigger: GCCCCAGGGGAGAGGATCCAAGGTATGTCTGTCTGA...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| 3UTR CCA 72 bp | TTTCCCCACACTCCACCTACACACCACTCCAAACCCTaGACCCCCATCTTAAATTATACCCTGCATTATATT | + |
|
Preference number: 3 (lower is better) Translates to: FPHTPPTHHSKP*TPILNYTLHYI Trigger: AATATAATGCAGGGTATAATTTAAGATGGGGGTCCAGGGTTTGGAGTGGTGTGTAGGTGGAGTGTGGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS-3UTR GCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGGCGCGCACGGAGCGTaGTTGCGTCACACGCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVGAHGA*LRHTPG Trigger: CCCCGGCGTGTGACGCAAGCACGCTCCGTGCGCGCC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGTCACACGCCGGGGCGTaGCCTGGCGCTGGTTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVSHAGA*PGAGWG Trigger: GCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGA...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR GCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCGCACGGAGCGTGCTTaGGTCACACGCCGGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVRTERA*VTRRGV Trigger: CACGCCCCGGCGTGTGACGCAAGCACGCTCCGTGCG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGAGGAGCCGCCATCTTaGGAGTGCAGCCGCGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVEEPPS*ECSRGR Trigger: CCGGCCGCGGCTGCACTCCCAAGATGGCGGCTCCTC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGGCGTGGCCTGGCGCTaGTTGGGGCGGGATCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVGVAWR*LGRDPD Trigger: ATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGTGGCCTGGCGCTGGTTaGGGCGGGATCCTGATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVWPGAG*GGILIL Trigger: CAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCA...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGTTGGGGCGGGATCCTaGTCCTGTTTCTTCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVVGAGS*SCFFIG Trigger: GCCTATGAAGAAACAGGATCAGGATCCCGCCCCAAC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGATGGTTCTATGTATGTaGCTACAGCCTTTTCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVMVLCM*LQPFPH Trigger: GTGGGGAAAAGGCTGTAGTCACATACATAGAACCAT...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS-3UTR TCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCATCTAACAGCCCTTTaGGGTAGGAATCAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVHLTAL*GRNQCP Trigger: AGGACATTGATTCCTACCTCAAAGGGCTGTTAGATG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR GCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCTAGCAAAAACAGTCTaGCTATTTCCAAGGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVLAKTV*LFPRTV Trigger: CACCGTCCTTGGAAATAGGCAGACTGTTTTTGCTAG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CCA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCAGTCCTGTAACAAATaGTTCTATGTATGTGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVQSCNK*FYVCDY Trigger: GTAGTCACATACATAGAACCATTTGTTACAGGACTG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS CCA 90 bp | ACGCGACGGCGCGCACGGAGCGTGCTTGCGTCACACGCCGGGGCGTaGCCTGGCGCTGGTTGGGGCGGGATCCTGATCCTGTTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRRRARSVLASHAGA*PGAGWGGILILFLH Trigger: ATGAAGAAACAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAGCACGCTCCGTGCGCGCCGTCGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS CCA 90 bp | CGGAGCGTGCTTGCGTCACACGCCGGGGCGTGGCCTGGCGCTGGTTaGGGCGGGATCCTGATCCTGTTTCTTCATAGGCATTTGTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSVLASHAGAWPGAG*GGILILFLHRHLYC Trigger: ACAATACAAATGCCTATGAAGAAACAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAGCACGCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CAA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGGAGGAGCCGCCATCTaGGGAGTGCAGCCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVGGAAI*GVQPRP Trigger: CGGCCGCGGCTGCACTCCCAAGATGGCGGCTCCTCC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS-3UTR CAA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGGCGCACGGAGCGTGCTaGCGTCACACGCCGGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVAHGAC*RHTPGR Trigger: ACGCCCCGGCGTGTGACGCAAGCACGCTCCGTGCGC...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS-3UTR CAA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGCAGCTCGCCGACCATTaGTGCCTCCAAACAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVQLADH*CLQTVL Trigger: CAGGACTGTTTGGAGGCACAAATGGTCGGCGAGCTG...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000293406.8 ENST00000591247.6 |
||
| CDS-3UTR CAA 90 bp | CGCCGACCATTTGTGCCTCCAAACAGTCCTGTAACAAATGGTTCTATGTATGTGTTTCTTCATAGGCATTaGTATTGTCACTTCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRPFVPPNSPVTNGSMYVFLHRH*YCHFLS Trigger: GCTCAAGAAGTGACAATACAAATGCCTATGAAGAAA...CACATACATAGAACCATTTGTTACAGGACTGTTTGGAGGCACAAATGGTCGGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS GCA 72 bp | GAGCGCCGCGACGCGACGGCGCGCACGGAGCGTGCTTaGGTCACACGCCGGGGCGTGGCCTGGCGCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ERRDATARTERA*VTRRGVAWRWL Trigger: CAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAGCACGCTCCGTGCGCGCCGTCGCGTCGCGGCGCTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS CCA 72 bp | CGCGCACGGAGCGTGCTTGCGTCACACGCCGGGGCGTaGCCTGGCGCTGGTTGGGGCGGGATCCTGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RARSVLASHAGA*PGAGWGGILIL Trigger: CAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAGCACGCTCCGTGCGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS CCA 72 bp | ACGGAGCGTGCTTGCGTCACACGCCGGGGCGTGGCCTaGCGCTGGTTGGGGCGGGATCCTGATCCTGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TERACVTRRGVA*RWLGRDPDPVS Trigger: AGAAACAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAGCACGCTCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||
| CDS CCA 72 bp | CTTGCGTCACACGCCGGGGCGTGGCCTGGCGCTGGTTaGGGCGGGATCCTGATCCTGTTTCTTCATAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LASHAGAWPGAG*GGILILFLHRH Trigger: ATGCCTATGAAGAAACAGGATCAGGATCCCGCCCCAACCAGCGCCAGGCCACGCCCCGGCGTGTGACGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591247.6 |
||