RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LSM11 (Homo sapiens)

Ensembl gene IDs: ENSG00000155858

Ensembl transcript IDs: ENST00000286307.6

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGACAAGAAGCCACCACACAAGCATCTTAGAGTCCCATCTGGTATaGCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGG +
Preference number: 1 (lower is better)
Translates to: RTRSHHTSILESHLV*HLQRLPLVRGRLKR
Trigger: CCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGATGGGACTCTAAGATGCTTGTGTGGTGGCTTCTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp TTCATGCACAACTCTTTGAAGCTGGACATGAAGGTCACAGTCTCCTaGCATAAAGCTCACAGGACAGTTCACACTACGGACAGAGGGGCA +
Preference number: 1 (lower is better)
Translates to: FMHNSLKLDMKVTVS*HKAHRTVHTTDRGA
Trigger: TGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCTTTATGTCAGGAGACTGTGACCTTCATGTCCAGCTTCAAAGAGTTGTGCATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp TTCTACCTTATTGGGAAAGTAGAGTACATCATTCTAGCCGAGGGATaGGAGGGCAGGCAGATGAGGATAGCCACACAGGTATACGCAGTG +
Preference number: 1 (lower is better)
Translates to: FYLIGKVEYIILAEG*EGRQMRIATQVYAV
Trigger: CACTGCGTATACCTGTGTGGCTATCCTCATCTGCCTGCCCTCTCATCCCTCGGCTAGAATGATGTACTCTACTTTCCCAATAAGGTAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 90 bp CTGACAGGAACCCCAAAGGCTTATCTTAAATCCATCAACTCAATTTaGCAGAAAGTGCTGACAGACCACCCACCTTTGCAACACAGGGCT +
Preference number: 1 (lower is better)
Translates to: LTGTPKAYLKSINSI*QKVLTDHPPLQHRA
Trigger: AGCCCTGTGTTGCAAAGGTGGGTGGTCTGTCAGCACTTTCTGGCAAATTGAGTTGATGGATTTAAGATAAGCCTTTGGGGTTCCTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp TTTGTAAGGCTTCTGAGGATTAAGGGCAGCTCATCGCTCAGGACTTaGCAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATA +
Preference number: 1 (lower is better)
Translates to: FVRLLRIKGSSSLRT*QSLKELLDSFTTRI
Trigger: TATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTGAGCGATGAGCTGCCCTTAATCCTCAGAAGCCTTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp ACTGAGAGTAAAGGAGGCCCAACCCTTCCTCAGGGCCCAGAAAACTaGCAGGAACCCCAAAGGCTTATCTTAAATCCATCAACTCAATTT +
Preference number: 1 (lower is better)
Translates to: TESKGGPTLPQGPEN*QEPQRLILNPSTQF
Trigger: AAATTGAGTTGATGGATTTAAGATAAGCCTTTGGGGTTCCTGTCAGTTTTCTGGGCCCTGAGGAAGGGTTGGGCCTCCTTTACTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 90 bp GTGAAACCATATTCTGAAAGATATTCTACACATGCTGGCCCTGCCTaGAAAGGGGACTCTCAGCCGTGTGATGTGTATTACCGAGTTCAT +
Preference number: 1 (lower is better)
Translates to: VKPYSERYSTHAGPA*KGDSQPCDVYYRVH
Trigger: ATGAACTCGGTAATACACATCACACGGCTGAGAGTCCCCTTTCCAGGCAGGGCCAGCATGTGTAGAATATCTTTCAGAATATGGTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp AAGGGAATAAATCTACCACCCCTGTTTCATGGTGAAACCATATTCTaGAAGATATTCTACACATGCTGGCCCTGCCTGGAAAGGGGACTC +
Preference number: 1 (lower is better)
Translates to: KGINLPPLFHGETIF*KIFYTCWPCLERGL
Trigger: GAGTCCCCTTTCCAGGCAGGGCCAGCATGTGTAGAATATCTTTCAGAATATGGTTTCACCATGAAACAGGGGTGGTAGATTTATTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp GTATTTGTGGGTGCTATGGTGTTCCTGTTGACTCAAGCCAGGCTGTaGGTAAAGTGTCGCTTTAGACACTACCCACTGTACTTTGTAAGA +
Preference number: 1 (lower is better)
Translates to: VFVGAMVFLLTQARL*VKCRFRHYPLYFVR
Trigger: TCTTACAAAGTACAGTGGGTAGTGTCTAAAGCGACACTTTACTCACAGCCTGGCTTGAGTCAACAGGAACACCATAGCACCCACAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 90 bp ACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATaGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCAT +
Preference number: 1 (lower is better)
Translates to: TISKGAPGLFHHKDR*SHSYPQLIARISMH
Trigger: ATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCATCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp CGCTTTAGACACTACCCACTGTACTTTGTAAGAACTTCTTTGGCCTaGCACAAGGGAATAAATCTACCACCCCTGTTTCATGGTGAAACC +
Preference number: 1 (lower is better)
Translates to: RFRHYPLYFVRTSLA*HKGINLPPLFHGET
Trigger: GGTTTCACCATGAAACAGGGGTGGTAGATTTATTCCCTTGTGTCAGGCCAAAGAAGTTCTTACAAAGTACAGTGGGTAGTGTCTAAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 90 bp ACAGTTTTCAGACTCCCATTACGACACATATCTAAAGCTGAACATTaGAAACTGACCTTACTAGCAGCAATTCTCCCTAGACAGGAAGGG +
Preference number: 1 (lower is better)
Translates to: TVFRLPLRHISKAEH*KLTLLAAILPRQEG
Trigger: CCCTTCCTGTCTAGGGAGAATTGCTGCTAGTAAGGTCAGTTTGCAATGTTCAGCTTTAGATATGTGTCGTAATGGGAGTCTGAAAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 90 bp TGCATATGCAGGACCAGAGGGAATCATTCCAACTCAGAGTTTCACTaGGATACTAGGATACAGCATAGCAGCAATTCATGCACTTTATTT +
Preference number: 1 (lower is better)
Translates to: CICRTRGNHSNSEFH*DTRIQHSSNSCTLF
Trigger: AAATAAAGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTTGGAATGATTCCCTCTGGTCCTGCATATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 90 bp AGAGAGAATCATGTCAGGCAAAATTCAAAAGTTAGTTACAAGACGTaGATGCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATC +
Preference number: 1 (lower is better)
Translates to: RENHVRQNSKVSYKT*MQGSKAIYTTTLGI
Trigger: GATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGCATCCACGTCTTGTAACTAACTTTTGAATTTTGCCTGACATGATTCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp AGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATaGGTACTCAGGGCACTAGCTTTTAGACATGCAATACTTCTTTTT +
Preference number: 1 (lower is better)
Translates to: RAPRQFTPLLLESNS*VLRALAFRHAILLF
Trigger: AAAAAGAAGTATTGCATGTCTAAAAGCTAGTGCCCTGAGTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 90 bp AGAATCATGTCAGGCAAAATTCAAAAGTTAGTTACAAGACGTGGATaGAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAAT +
Preference number: 1 (lower is better)
Translates to: RIMSGKIQKLVTRRG*RAPRQFTPLLLESN
Trigger: ATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGCATCCACGTCTTGTAACTAACTTTTGAATTTTGCCTGACATGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 90 bp CATGGCTTACTATTTGCTTTACTGTCAGGACAACAGAAAAAGAAGTaGACAGCTACCCTAGATTCTAGCTCACACATAATTCAGCCAGAT +
Preference number: 1 (lower is better)
Translates to: HGLLFALLSGQQKKK*TATLDSSSHIIQPD
Trigger: ATCTGGCTGAATTATGTGTGAGCTAGAATCTAGGGTAGCTGTCCACTTCTTTTTCTGTTGTCCTGACAGTAAAGCAAATAGTAAGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 90 bp TGCCTAACAGTCTGTGTCAAATGCAGCCTATTCTGCACTAGTGATTaGAAAAGCACAGAATATGATTCAAGTAGAAGTATTTGTGGGTGC +
Preference number: 1 (lower is better)
Translates to: CLTVCVKCSLFCTSD*KSTEYDSSRSICGC
Trigger: GCACCCACAAATACTTCTACTTGAATCATATTCTGTGCTTTTTCAATCACTAGTGCAGAATAGGCTGCATTTGACACAGACTGTTAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAAGCCACCCACGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRSHPRS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACGTGGGTGGCT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCGGCCTGTCCTCCCCTTaGGCTCATCTTCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSGLSSP*AHLPGG
Trigger: GCCCCCTGGAAGATGAGCTCAAGGGGAGGACAGGCC...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACGAGTCCCATCTGGTATaGCATTTGCAGAGGCTACCT +
Preference number: 2 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHESHLV*HLQRLP
Trigger: AGGTAGCCTCTGCAAATGGCATACCAGATGGGACTC...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTGCCTGCTCCGTCCTCTaGATATGCAGGACCAGAGGG +
Preference number: 2 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFACSVL*ICRTRG
Trigger: CCCTCTGGTCCTGCATATGCAGAGGACGGAGCAGGC...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACACAGTCTGTGTCAAATaGAGCCTATTCTGCACTAGT +
Preference number: 2 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHTVCVK*SLFCTS
Trigger: ACTAGTGCAGAATAGGCTGCATTTGACACAGACTGT...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACATGGTCTTGATCTCCTaGCCTTGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYMVLIS*PCDPPA
Trigger: GGCGGGTGGATCACAAGGTCAGGAGATCAAGACCAT...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGACTTGGCTTCCTGACTTaGCATGCACCATGCACAAAG +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRLGFLT*HAPCTK
Trigger: CTTTGTGCATGGTGCATGTCAAGTCAGGAAGCCAAG...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACTCCGTCCTCTGCATATaGAGGACCAGAGGGAATCAT +
Preference number: 2 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYSVLCI*RTRGNH
Trigger: ATGATTCCCTCTGGTCCTGCATATGCAGAGGACGGA...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACAACTCAGAGTTTCACTaGGATACTAGGATACAGCAT +
Preference number: 2 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHNSEFH*DTRIQH
Trigger: ATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAATATTCTACACATGCTaGCCCTGCCTGGAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRIFYTC*PCLERG
Trigger: TCCCCTTTCCAGGCAGGGCCAGCATGTGTAGAATAT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACAGATTACTGTTCACTTaGGTTTGTAAACTGGAACCT +
Preference number: 2 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHRLLFT*VCKLEP
Trigger: AGGTTCCAGTTTACAAACTCAAGTGAACAGTAATCT...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCATTAATGCAAACGCCTaGCCTCCCAAGGCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSINANA*PPKACP
Trigger: AGGACAGGCCTTGGGAGGGCAGGCGTTTGCATTAAT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATGCTCACCTTTTCATTaGATGATGAGCCAGTGGTCC +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRCSPFH*MMSQWS
Trigger: GGACCACTGGCTCATCATGCAATGAAAAGGTGAGCA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAGGCGTGAGCCACCGTaGCTGGCTGAGATTACTTTT +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSRREPP*LAEITF
Trigger: AAAAGTAATCTCAGCCAGGCACGGTGGCTCACGCCT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTTTGGTTTCAGGGTCTaGAGTAAATCACAATACCAA +
Preference number: 2 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVFGFRV*SKSQYQ
Trigger: TTGGTATTGTGATTTACTTCAGACCCTGAAACCAAA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACGCACTCATTGCTGGCTaGTTTGAGCATACCGCCTAT +
Preference number: 2 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYALIAG*FEHTAY
Trigger: ATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGC...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCATACCACAGGGTACATaGACTAGCACCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSIPQGT*TSTMPQ
Trigger: CTGTGGCATGGTGCTAGTGCATGTACCCTGTGGTAT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCGTTAGTTACAAGACGTaGATGCAGGGCTCCAAGGCA +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSVSYKT*MQGSKA
Trigger: TGCCTTGGAGCCCTGCATCCACGTCTTGTAACTAAC...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTACTCAAGCCAGGCTGTaGGTAAAGTGTCGCTTTAGA +
Preference number: 2 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFTQARL*VKCRFR
Trigger: TCTAAAGCGACACTTTACTCACAGCCTGGCTTGAGT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAGAGCAAGGTACTGACTaGTCTAAAGCCACTCTCCCC +
Preference number: 2 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSEQGTD*SKATLP
Trigger: GGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTC...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CAA 90 bp GTACTCCTTTCCATAATAAGAAGAAGGATCAAAACAGAGCACTCATaGCTGGCTGCTTTGAGCATACCGCCTATCCAAATTTCACCCCTA +
Preference number: 2 (lower is better)
Translates to: VLLSIIRRRIKTEHS*LAALSIPPIQISPL
Trigger: TAGGGGTGAAATTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTTGATCCTTCTTCTTATTATGGAAAGGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAATTCCACTCATATCATaGCCCCTAAGTCTAATGGAA +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRIPLIS*PLSLME
Trigger: TTCCATTAGACTTAGGGGTCATGATATGAGTGGAAT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAAGAACTTCTTTGGCCTaGCACAAGGGAATAAATCTA +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRRTSLA*HKGINL
Trigger: TAGATTTATTCCCTTGTGTCAGGCCAAAGAAGTTCT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAGGTTTCTTGGCTTCCTaGCTTGACATGCACCATGCA +
Preference number: 2 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSGFLAS*LDMHHA
Trigger: TGCATGGTGCATGTCAAGTCAGGAAGCCAAGAAACC...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCCAAGCCCAAATCCCTaGAGAATTCTAGAAACCAGT +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSPSPNP*RILETS
Trigger: ACTGGTTTCTAGAATTCTCCAGGGATTTGGGCTTGG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCCATTGCTGGCTGCTTTaGGCATACCGCCTATCCAAA +
Preference number: 2 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFHCWLL*AYRLSK
Trigger: TTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATG...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAAAGGTCACAGTCTCCTaGCATAAAGCTCACAGGACA +
Preference number: 2 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSKVTVS*HKAHRT
Trigger: TGTCCTGTGAGCTTTATGTCAGGAGACTGTGACCTT...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCATCATCGCTCAGGACTTaGCAATCTCTAAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSSSLRT*QSLKEL
Trigger: GAGCTCCTTTAGAGATTGTCAAGTCCTGAGCGATGA...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCTCCAGAAGATACTGCTaGCTTCCGAAGATAGTTACA +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSSRRYC*LPKIVT
Trigger: TGTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGA...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATTACACCACTACTCTTaGAATCGAATTCATGAGTAC +
Preference number: 2 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRLHHYS*NRIHEY
Trigger: GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAAAGATTGGAAAGCTTTaGGGTAGCACCAGTGACAGC +
Preference number: 2 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSKIGKL*GSTSDS
Trigger: GCTGTCACTGGTGCTACCCCAAAGCTTTCCAATCTT...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CAA 90 bp ATAATAAGAAGAAGGATCAAAACAGAGCACTCATTGCTGGCTGCTTaGAGCATACCGCCTATCCAAATTTCACCCCTACATAAGTTGGTA +
Preference number: 2 (lower is better)
Translates to: IIRRRIKTEHSLLAA*SIPPIQISPLHKLV
Trigger: TACCAACTTATGTAGGGGTGAAATTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTTGATCCTTCTTCTTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAAAGGTAGATACTTTTaGGAAGACCTCACCAACTAC +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSKGRYF*EDLTNY
Trigger: GTAGTTGGTGAGGTCTTCTCAAAAGTATCTACCTTT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCTTGGAATCGAATTCATaGGTACTCAGGGCACTAGCT +
Preference number: 2 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFLESNS*VLRALA
Trigger: AGCTAGTGCCCTGAGTACTCATGAATTCGATTCCAA...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAGGCACTGGAATGAATaGAAACTGATTATATTCCGT +
Preference number: 2 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSRHWNE*KLIIFR
Trigger: ACGGAATATAATCAGTTTTCATTCATTCCAGTGCCT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp CACACTACGGACAGAGGGGCAATACCACAGGGTACATaGACTAGCACCATGCCACAGAAGTCAAAGAGAAGG +
Preference number: 3 (lower is better)
Translates to: HTTDRGAIPQGT*TSTMPQKSKRR
Trigger: CCTTCTCTTTGACTTCTGTGGCATGGTGCTAGTGCATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp AGCCACCACACAAGCATCTTAGAGTCCCATCTGGTATaGCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGA +
Preference number: 3 (lower is better)
Translates to: SHHTSILESHLV*HLQRLPLVRGR
Trigger: TCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGATGGGACTCTAAGATGCTTGTGTGGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACTTCATGCACAACTCTTaGAAGCTGGACATGAAGGTC +
Preference number: 3 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHFMHNS*KLDMKV
Trigger: GACCTTCATGTCCAGCTTCAAAGAGTTGTGCATGAA...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp ATTGGGAAAGTAGAGTACATCATTCTAGCCGAGGGATaGGAGGGCAGGCAGATGAGGATAGCCACACAGGTA +
Preference number: 3 (lower is better)
Translates to: IGKVEYIILAEG*EGRQMRIATQV
Trigger: TACCTGTGTGGCTATCCTCATCTGCCTGCCCTCTCATCCCTCGGCTAGAATGATGTACTCTACTTTCCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp CTTCTGAGGATTAAGGGCAGCTCATCGCTCAGGACTTaGCAATCTCTAAAGGAGCTCCTGGACTCTTTCACC +
Preference number: 3 (lower is better)
Translates to: LLRIKGSSSLRT*QSLKELLDSFT
Trigger: GGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTGAGCGATGAGCTGCCCTTAATCCTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 72 bp AAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATaGAGCCACTCCTATCCACAACTCATAGCAAGGATC +
Preference number: 3 (lower is better)
Translates to: KGAPGLFHHKDR*SHSYPQLIARI
Trigger: GATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCATCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCACAGACCACCCACCTTaGCAACACAGGGCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSTDHPP*QHRAQD
Trigger: ATCCTGAGCCCTGTGTTGCAAAGGTGGGTGGTCTGT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp AACTCTTTGAAGCTGGACATGAAGGTCACAGTCTCCTaGCATAAAGCTCACAGGACAGTTCACACTACGGAC +
Preference number: 3 (lower is better)
Translates to: NSLKLDMKVTVS*HKAHRTVHTTD
Trigger: GTCCGTAGTGTGAACTGTCCTGTGAGCTTTATGTCAGGAGACTGTGACCTTCATGTCCAGCTTCAAAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp TTAATGCCAACGGTTTCTTGGCTTCCTGACTTGACATaGACCATGCACAAAGAGCAAGGTACTGACTGGTCT +
Preference number: 3 (lower is better)
Translates to: LMPTVSWLPDLT*TMHKEQGTDWS
Trigger: AGACCAGTCAGTACCTTGCTCTTTGTGCATGGTGCATGTCAAGTCAGGAAGCCAAGAAACCGTTGGCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 72 bp TATTCTGAAAGATATTCTACACATGCTGGCCCTGCCTaGAAAGGGGACTCTCAGCCGTGTGATGTGTATTAC +
Preference number: 3 (lower is better)
Translates to: YSERYSTHAGPA*KGDSQPCDVYY
Trigger: GTAATACACATCACACGGCTGAGAGTCCCCTTTCCAGGCAGGGCCAGCATGTGTAGAATATCTTTCAGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp GAAGGATCAAAACAGAGCACTCATTGCTGGCTGCTTTaGGCATACCGCCTATCCAAATTTCACCCCTACATA +
Preference number: 3 (lower is better)
Translates to: EGSKQSTHCWLL*AYRLSKFHPYI
Trigger: TATGTAGGGGTGAAATTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTTGATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp AAGAAGAAGGATCAAAACAGAGCACTCATTGCTGGCTaGTTTGAGCATACCGCCTATCCAAATTTCACCCCT +
Preference number: 3 (lower is better)
Translates to: KKKDQNRALIAG*FEHTAYPNFTP
Trigger: AGGGGTGAAATTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTTGATCCTTCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 72 bp AGGACCAGAGGGAATCATTCCAACTCAGAGTTTCACTaGGATACTAGGATACAGCATAGCAGCAATTCATGC +
Preference number: 3 (lower is better)
Translates to: RTRGNHSNSEFH*DTRIQHSSNSC
Trigger: GCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTTGGAATGATTCCCTCTGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTTCTTGGCTTCCTGACTaGACATGCACCATGCACAAA +
Preference number: 3 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFSWLPD*TCTMHK
Trigger: TTTGTGCATGGTGCATGTCAAGTCAGGAAGCCAAGA...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp AATCTACCACCCCTGTTTCATGGTGAAACCATATTCTaGAAGATATTCTACACATGCTGGCCCTGCCTGGAA +
Preference number: 3 (lower is better)
Translates to: NLPPLFHGETIF*KIFYTCWPCLE
Trigger: TTCCAGGCAGGGCCAGCATGTGTAGAATATCTTTCAGAATATGGTTTCACCATGAAACAGGGGTGGTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp CATCTAGATTTTAATGCCAACGGTTTCTTGGCTTCCTaGCTTGACATGCACCATGCACAAAGAGCAAGGTAC +
Preference number: 3 (lower is better)
Translates to: HLDFNANGFLAS*LDMHHAQRARY
Trigger: GTACCTTGCTCTTTGTGCATGGTGCATGTCAAGTCAGGAAGCCAAGAAACCGTTGGCATTAAAATCTAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp ACCCCAAAGGCTTATCTTAAATCCATCAACTCAATTTaGCAGAAAGTGCTGACAGACCACCCACCTTTGCAA +
Preference number: 3 (lower is better)
Translates to: TPKAYLKSINSI*QKVLTDHPPLQ
Trigger: TTGCAAAGGTGGGTGGTCTGTCAGCACTTTCTGGCAAATTGAGTTGATGGATTTAAGATAAGCCTTTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATGGAAGATCAGATATTaGGTTTCAGGGTCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRWKIRY*VSGSEV
Trigger: TACTTCAGACCCTGAAACCAAATATCTGATCTTCCA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTAAAACAGAGCACTCATaGCTGGCTGCTTTGAGCATA +
Preference number: 3 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFKTEHS*LAALSI
Trigger: TATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp TCAGGCAAAATTCAAAAGTTAGTTACAAGACGTGGATaGAGGGCTCCAAGGCAATTTACACCACTACTCTTG +
Preference number: 3 (lower is better)
Translates to: SGKIQKLVTRRG*RAPRQFTPLLL
Trigger: CAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGCATCCACGTCTTGTAACTAACTTTTGAATTTTGCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp GACCAGGTGTCCCAGCTCCCTAAACTTTATTCACCCTaGTTCTCAGAAGGCTTATTTATGTTACACAACAAA +
Preference number: 3 (lower is better)
Translates to: DQVSQLPKLYSP*FSEGLFMLHNK
Trigger: TTTGTTGTGTAACATAAATAAGCCTTCTGAGAAGCAGGGTGAATAAAGTTTAGGGAGCTGGGACACCTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CCA 72 bp CATGTCAGGCAAAATTCAAAAGTTAGTTACAAGACGTaGATGCAGGGCTCCAAGGCAATTTACACCACTACT +
Preference number: 3 (lower is better)
Translates to: HVRQNSKVSYKT*MQGSKAIYTTT
Trigger: AGTAGTGGTGTAAATTGCCTTGGAGCCCTGCATCCACGTCTTGTAACTAACTTTTGAATTTTGCCTGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCATCCATCAACTCAATTaGCCAGAAAGTGCTGACAGA +
Preference number: 3 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSIHQLN*PESADR
Trigger: TCTGTCAGCACTTTCTGGCAAATTGAGTTGATGGAT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp CACTGGGATACTAGGATACAGCATAGCAGCAATTCATaGACTTTATTTCTAAAAACCAAAGCTCAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: HWDTRIQHSSNS*TLFLKTKAQAE
Trigger: CTCAGCCTGAGCTTTGGTTTTTAGAAATAAAGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp AGACTCCCATTACGACACATATCTAAAGCTGAACATTaGAAACTGACCTTACTAGCAGCAATTCTCCCTAGA +
Preference number: 3 (lower is better)
Translates to: RLPLRHISKAEH*KLTLLAAILPR
Trigger: TCTAGGGAGAATTGCTGCTAGTAAGGTCAGTTTGCAATGTTCAGCTTTAGATATGTGTCGTAATGGGAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp AGGCAATTTACACCACTACTCTTGGAATCGAATTCATaGGTACTCAGGGCACTAGCTTTTAGACATGCAATA +
Preference number: 3 (lower is better)
Translates to: RQFTPLLLESNS*VLRALAFRHAI
Trigger: TATTGCATGTCTAAAAGCTAGTGCCCTGAGTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR GCA 72 bp ATACCAAATCAGATGCATGTATCTATGAATGCTTTTTaGCTTGATATTAATGCAAACGCCTGCCCTCCCAAG +
Preference number: 3 (lower is better)
Translates to: IPNQMHVSMNAF*LDINANACPPK
Trigger: CTTGGGAGGGCAGGCGTTTGCATTAATATCAAGGCAAAAAGCATTCATAGATACATGCATCTGATTTGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp GTCTGTGTCAAATGCAGCCTATTCTGCACTAGTGATTaGAAAAGCACAGAATATGATTCAAGTAGAAGTATT +
Preference number: 3 (lower is better)
Translates to: VCVKCSLFCTSD*KSTEYDSSRSI
Trigger: AATACTTCTACTTGAATCATATTCTGTGCTTTTTCAATCACTAGTGCAGAATAGGCTGCATTTGACACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp GTGAAACCATTATATTTACACCACGATACTCTTACATaGACCTTGACTTTCCTACAGCAACAGTTTCATTCA +
Preference number: 3 (lower is better)
Translates to: VKPLYLHHDTLT*TLTFLQQQFHS
Trigger: TGAATGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAATATAATGGTTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR TCA 72 bp AGTCTAATGGAAGATCAGATATTTGGTTTCAGGGTCTaGAGTAAATCACAATACCAAATCAGATGCATGTAT +
Preference number: 3 (lower is better)
Translates to: SLMEDQIFGFRV*SKSQYQIRCMY
Trigger: ATACATGCATCTGATTTGGTATTGTGATTTACTTCAGACCCTGAAACCAAATATCTGATCTTCCATTAGACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGGGCCTGTCCTCCCCTTaGGCTCATCTTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMGLSSP*AHLPGG
Trigger: GCCCCCTGGAAGATGAGCTCAAGGGGAGGACAGGCC...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGCATTGGGGTAGGGAATaGGAGGCAGGCGGGGCGCGT +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMHWGRE*EAGGAR
Trigger: ACGCGCCCCGCCTGCCTCCCATTCCCTACCCCAATG...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCCTCTTTGGCCACCATaGGACGGCGGAGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVPLWPP*DGGGAG
Trigger: TCCAGCGCCTCCGCCGTCTCATGGTGGCCAAAGAGG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCGCAAGGGCATTCGCGTaGGCACGTTGCGTGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVARAFA*ARCVAP
Trigger: AGGCGCCACGCAACGTGCTCACGCGAATGCCCTTGC...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCGTGAGCACGTTGCGTaGCGCCTTCCTGCTCCGACC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVREHVA*RLPAPT
Trigger: GGTCGGAGCAGGAAGGCGCCACGCAACGTGCTCACG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGATTCTAGCCGAGGGATaGGAGGGCAGGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMILAEG*EGRQMR
Trigger: CCTCATCTGCCTGCCCTCTCATCCCTCGGCTAGAAT...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAGACGGCGGAGGCGCTaGATGCGCTCGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSRRRRR*MRSGSG
Trigger: CCCGGACCCCGAGCGCATCCAGCGCCTCCGCCGTCT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACTGCGTGGCGCCTTCCTaGTCCGACCCGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYCVAPS*SDPDPS
Trigger: GGAGGGGTCCGGGTCGGAGCAGGAAGGCGCCACGCA...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCGCCCCGAAGTCCCTTaGAAGTGCGGATGTGAACAT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVRPEVP*KCGCEH
Trigger: ATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTGCGGGAACGCTTGTGTaGGCCCCGGCCAGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFAGTLV*APASVC
Trigger: GCAGACACTGGCCGGGGCTCACACAAGCGTTCCCGC...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACTTTGCCAGAAAGTGCTaGCAGACCACCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHFARKC*QTTHLC
Trigger: GCAAAGGTGGGTGGTCTGTCAGCACTTTCTGGCAAA...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACCTGAGCTGGTCACTGTaGAAGATGAACCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHLSWSL*KMNQQD
Trigger: GTCCTGCTGGTTCATCTTGCACAGTGACCAGCTCAG...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAACTCCGCCACGTTGTTaGAGCAGGGGGCATTGGGGT +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRTPPRC*SRGHWG
Trigger: ACCCCAATGCCCCCTGCTTCAACAACGTGGCGGAGT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACGGACTCTCAGCCGTGTaGTGTGTATTACCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHGLSAV*CVLPSS
Trigger: TGAACTCGGTAATACACATCACACGGCTGAGAGTCC...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGGAGTCCCATCTGGTATaGCATTTGCAGAGGCTACCT +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMESHLV*HLQRLP
Trigger: AGGTAGCCTCTGCAAATGGCATACCAGATGGGACTC...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACAAGCTCAGGCTGAGCTaGTCACTGTGCAAGATGAAC +
Preference number: 4 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHKLRLS*SLCKMN
Trigger: GTTCATCTTGCACAGTGACCAGCTCAGCCTGAGCTT...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACAGCCACCCACGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYSHPRS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACGTGGGTGGCT...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGAAAATGAGTCAGCCATaGTGGCTGACCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMKMSQP*WLTQLL
Trigger: GAGTAGCTGGGTCAGCCACCATGGCTGACTCATTTT...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCGCACTCATTGCTGGCTaGTTTGAGCATACCGCCTAT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVALIAG*FEHTAY
Trigger: ATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGC...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGACTGACAGCTCTGACCTaGACTCCTCCCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRLTALT*TPPLQR
Trigger: CCTCTGCAAGGGAGGAGTCCAGGTCAGAGCTGTCAG...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTCATGCTGGCCCTGCCTaGAAAGGGGACTCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTHAGPA*KGDSQP
Trigger: CGGCTGAGAGTCCCCTTTCCAGGCAGGGCCAGCATG...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCACCCGGACTCCGGTCCTaGGGAAGCTCTCGTACTCCG +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSPGLRS*GSSRTP
Trigger: CGGAGTACGAGAGCTTCCTCAGGACCGGAGTCCGGG...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCCAAGTGGATGTCTGTaGGTATCTAGACAGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVPSGCL*VSRQSG
Trigger: TCCACTCTGTCTAGATACTCACAGACATCCACTTGG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTCATCGCTCAGGACTTaGCAATCTCTAAAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVSSLRT*QSLKEL
Trigger: GAGCTCCTTTAGAGATTGTCAAGTCCTGAGCGATGA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTCCTGGACTCCTCCCTTaGAGAGGCCTGCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTPGLLP*RGLQGR
Trigger: TCTTCCCTGCAGGCCTCTGCAAGGGAGGAGTCCAGG...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACGCCTGCTCCGTCCTCTaGATATGCAGGACCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYACSVL*ICRTRG
Trigger: CCCTCTGGTCCTGCATATGCAGAGGACGGAGCAGGC...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCGCAATCTTGGCTCACTaGAAGCTCCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSAILAH*KLRLPG
Trigger: ACCCGGGAGGCGGAGCTTGCAGTGAGCCAAGATTGC...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGCAAACTTCCACAGATTaGCCTTTCGGGATGTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMQTSTD*PFGMCH
Trigger: ATGACACATCCCGAAAGGGCAATCTGTGGAAGTTTG...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGCTTCCTGACTTGACATaGACCATGCACAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMLPDLT*TMHKEQ
Trigger: TTGCTCTTTGTGCATGGTGCATGTCAAGTCAGGAAG...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACGAAAAGGGTGAGGCCTaGGATATAGCGGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYEKGEA*DIAGAA
Trigger: TGCTGCTCCCGCTATATCCCAGGCCTCACCCTTTTC...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCACCGCTCCTCCATGTTTaGAAGGCCCGCAAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSPLLHV*KARKPR
Trigger: CCTCGGCTTGCGGGCCTTTCAAACATGGAGGAGCGG...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACGATTTATGTGTCGAGTaGATACCTGCTGGTAATCCA +
Preference number: 4 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHDLCVE*IPAGNP
Trigger: TGGATTACCAGCAGGTATTCACTCGACACATAAATC...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACAACCAAAGCTCAGGCTaGGCTGGTCACTGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYNQSSG*AGHCAR
Trigger: TCTTGCACAGTGACCAGCTCAGCCTGAGCTTTGGTT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAATGATCAGAAAAGGGTaGGGCCTGGGATATAGCGGG +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRMIRKG*GLGYSG
Trigger: CCCGCTATATCCCAGGCCTCACCCTTTTCTGATCAT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGCACGATACTCTTACATaGACCTTGACTTTCCTACAG +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMHDTLT*TLTFLQ
Trigger: CTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTG...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTGTTCACCCAGAGGGCTaGCTTCGTGCAAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTVHPEG*LRARAF
Trigger: GAATGCCCTTGCACGAAGGCAGCCCTCTGGGTGAAC...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTTCCCTTGCAGAGGCCTaGAGGGAAGAAGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFSLAEA*REEGTE
Trigger: CTCTGTCCCTTCTTCCCTGCAGGCCTCTGCAAGGGA...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACATTAATGCAAACGCCTaGCCTCCCAAGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYINANA*PPKACP
Trigger: AGGACAGGCCTTGGGAGGGCAGGCGTTTGCATTAAT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCATGCACTAGCACCATaGCACAGAAGTCAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVHALAP*HRSQRE
Trigger: TTCTCTTTGACTTCTGTGGCATGGTGCTAGTGCATG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAAGGCGTGAGCCACCGTaGCTGGCTGAGATTACTTTT +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRRREPP*LAEITF
Trigger: AAAAGTAATCTCAGCCAGGCACGGTGGCTCACGCCT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTTTGCCTTTGTCAGCTaGTATGGAAATGGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVFAFVS*YGNGAS
Trigger: GCTTGCACCATTTCCATAGCAGCTGACAAAGGCAAA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAGAGCAAGGTACTGACTaGTCTAAAGCCACTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDREQGTD*SKATLP
Trigger: GGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTC...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCTTCTCAATGCCCCTGTaGGGTAGGTGTCTGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSFSMPL*GRCLWG
Trigger: TCCCCACAGACACCTACCTCACAGGGGCATTGAGAA...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTATGGTCTTGATCTCCTaGCCTTGTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFMVLIS*PCDPPA
Trigger: GGCGGGTGGATCACAAGGTCAGGAGATCAAGACCAT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCAGGGCCCAGAAAACTaGCAGGAACCCCAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSQGPEN*QEPQRL
Trigger: AAGCCTTTGGGGTTCCTGTCAGTTTTCTGGGCCCTG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACATACCACAGGGTACATaGACTAGCACCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYIPQGT*TSTMPQ
Trigger: CTGTGGCATGGTGCTAGTGCATGTACCCTGTGGTAT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTTACACATGCTGGCCCTaGCTGGAAAGGGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFYTCWP*LERGLS
Trigger: TGAGAGTCCCCTTTCCAGGCAGGGCCAGCATGTGTA...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCAGTTCCAGAAGATACTaGTGCCTTCCGAAGATAGTT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVSSRRY*CLPKIV
Trigger: AACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACT...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGTCATTCTCCATTTGGTaGTACCATATAAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMSFSIW*YHINPL
Trigger: CAAGGGGTTTATATGGTAGCACCAAATGGAGAATGA...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCAGGTATACGCAGTGTTaGCTGATGATTAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVRYTQC*LMIKPD
Trigger: GTCAGGTTTAATCATCAGGCAACACTGCGTATACCT...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCACTGGGAGGCAGAAGTTaGAGGGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSLGGRS*RELRSR
Trigger: GCGCGATCTCAGCTCCCTGCAACTTCTGCCTCCCAG...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCTTTGTCAGCTGCTATaGAAATGGTGCAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVLCQLL*KWCKQK
Trigger: TTTCTGCTTGCACCATTTCCATAGCAGCTGACAAAG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACAAGGTCACAGTCTCCTaGCATAAAGCTCACAGGACA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYKVTVS*HKAHRT
Trigger: TGTCCTGTGAGCTTTATGTCAGGAGACTGTGACCTT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACACTCAAGCCAGGCTGTaGGTAAAGTGTCGCTTTAGA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYTQARL*VKCRFR
Trigger: TCTAAAGCGACACTTTACTCACAGCCTGGCTTGAGT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTCTATGGTGTTCCTGTTaGCTCAAGCCAGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFLWCSC*LKPGCE
Trigger: CTCACAGCCTGGCTTGAGTCAACAGGAACACCATAG...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCGAAGTTGCAGGGAGCTaGGATCGCGCCACTGCACTG +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFEVAGS*DRATAL
Trigger: CAGTGCAGTGGCGCGATCTCAGCTCCCTGCAACTTC...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCAAAGGTAGATACTTTTaGGAAGACCTCACCAACTAC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVKGRYF*EDLTNY
Trigger: GTAGTTGGTGAGGTCTTCTCAAAAGTATCTACCTTT...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTTACTGAAAAAGGGTTaGCTGCATTCTATATCTGGC +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVLLKKG*LHSISG
Trigger: GCCAGATATAGAATGCAGTCAACCCTTTTTCAGTAA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCTGGTATATGAGCAGTaGAACTATAGATACGTAGAG +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVLVYEQ*NYRYVE
Trigger: CTCTACGTATCTATAGTTTCACTGCTCATATACCAG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACCACCACAAGGATAGATaGAGCCACTCCTATCCACAA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYHHKDR*SHSYPQ
Trigger: TTGTGGATAGGAGTGGCTCCATCTATCCTTGTGGTG...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGAACATTAATAAGTTATaGTGCAGAGGAGTATCCCCA +
Preference number: 4 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMNINKL*CRGVSP
Trigger: TGGGGATACTCCTCTGCACCATAACTTATTAATGTT...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CAA 72 bp TCAATTTGCCAGAAAGTGCTGACAGACCACCCACCTTaGCAACACAGGGCTCAGGATTCTTGCATTTACAAC +
Preference number: 4 (lower is better)
Translates to: SICQKVLTDHPP*QHRAQDSCIYN
Trigger: GTTGTAAATGCAAGAATCCTGAGCCCTGTGTTGCAAAGGTGGGTGGTCTGTCAGCACTTTCTGGCAAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCCCTCGAATGAAAATCTaGTTTATGTGTCGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVPRMKI*FMCRVN
Trigger: ATTCACTCGACACATAAATCAGATTTTCATTCGAGG...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCATTGCTGGCTGCTTTaGGCATACCGCCTATCCAAA +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSHCWLL*AYRLSK
Trigger: TTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCTTGGCTTCCTGACTTaGCATGCACCATGCACAAAG +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSLGFLT*HAPCTK
Trigger: CTTTGTGCATGGTGCATGTCAAGTCAGGAAGCCAAG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTGGTTTCTTGGCTTCCTaGCTTGACATGCACCATGCA +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTGFLAS*LDMHHA
Trigger: TGCATGGTGCATGTCAAGTCAGGAAGCCAAGAAACC...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCTCCGTCCTCTGCATATaGAGGACCAGAGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSSVLCI*RTRGNH
Trigger: ATGATTCCCTCTGGTCCTGCATATGCAGAGGACGGA...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTTTTTATGTAGCACCTaGCTTGCTTCTGTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVFLCST*LASVSY
Trigger: ATAAGACACAGAAGCAAGGCAGGTGCTACATAAAAA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACATATTCTACACATGCTaGCCCTGCCTGGAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYIFYTC*PCLERG
Trigger: TCCCCTTTCCAGGCAGGGCCAGCATGTGTAGAATAT...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
3UTR CAA 72 bp AGAAGGATCAAAACAGAGCACTCATTGCTGGCTGCTTaGAGCATACCGCCTATCCAAATTTCACCCCTACAT +
Preference number: 4 (lower is better)
Translates to: RRIKTEHSLLAA*SIPPIQISPLH
Trigger: ATGTAGGGGTGAAATTTGGATAGGCGGTATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTTGATCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCATGCTCTTCCCCACACTaGAGCCAACTTCCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSCSSPH*SQLPSG
Trigger: TCCACTTGGAAGTTGGCTTCAGTGTGGGGAAGAGCA...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTCCCGTTCATATGCTTTaGCTAGGACAGGTTTTCGGT +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFPVHML*LGQVFG
Trigger: ACCGAAAACCTGTCCTAGGCAAAGCATATGAACGGG...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCGTTACAAGACGTGGATaGAGGGCTCCAAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSVTRRG*RAPRQF
Trigger: AAATTGCCTTGGAGCCCTGCATCCACGTCTTGTAAC...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACACAGTCTGTGTCAAATaGAGCCTATTCTGCACTAGT +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYTVCVK*SLFCTS
Trigger: ACTAGTGCAGAATAGGCTGCATTTGACACAGACTGT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTTGCTCACCTTTTCATTaGATGATGAGCCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTCSPFH*MMSQWS
Trigger: GGACCACTGGCTCATCATGCAATGAAAAGGTGAGCA...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACTCCAGAAGATACTGCTaGCTTCCGAAGATAGTTACA +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYSRRYC*LPKIVT
Trigger: TGTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGA...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATCCATCAACTCAATTTaGCAGAAAGTGCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRSINSI*QKVLTD
Trigger: GTCTGTCAGCACTTTCTGGCAAATTGAGTTGATGGA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCTCACGGATACAGCGATaGAGTTCACCCAGAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFSRIQR*SSPRGL
Trigger: CAGCCCTCTGGGTGAACTCCATCGCTGTATCCGTGA...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTTTTTTCTTACGGGACTaGCCTCTGGAAAGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFFFLRD*PLERVV
Trigger: TACCACCCTTTCCAGAGGCCAGTCCCGTAAGAAAAA...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTATGCCAACGGTTTCTTaGCTTCCTGACTTGACATGC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTMPTVS*LPDLTC
Trigger: GCATGTCAAGTCAGGAAGCCAAGAAACCGTTGGCAT...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAAGATTGGAAAGCTTTaGGGTAGCACCAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSKIGKL*GSTSDS
Trigger: GCTGTCACTGGTGCTACCCCAAAGCTTTCCAATCTT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACTTCTTGGAGGAATCTTaGAGTTTCAGCCGATCAAAT +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYFLEES*SFSRSN
Trigger: ATTTGATCGGCTGAAACTTCAAGATTCCTCCAAGAA...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCGGTCACTGTGCAAGATaGACCAGCAGGACATTCTCG +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFGHCAR*TSRTFS
Trigger: CGAGAATGTCCTGCTGGTTCATCTTGCACAGTGACC...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAACCCCTGTTTCATGGTaGAACCATATTCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRTPVSW*NHILKD
Trigger: ATCTTTCAGAATATGGTTTCACCATGAAACAGGGGT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACCCAGAACTTGTCGAATaGAACAAGGAAGCCTGTACA +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYPELVE*NKEACT
Trigger: TGTACAGGCTTCCTTGTTGCATTCGACAAGTTCTGG...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACATCCACATCAGTAAGTaGCATATTCCAGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYIHISK*HIPELV
Trigger: GACAAGTTCTGGAATATGGCACTTACTGATGTGGAT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACCCTCTGATCATAAGATaGTCCCTGGAAGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYPLIIR*SLEGSI
Trigger: TATGCTTCCTTCCAGGGACCATCTTATGATCAGAGG...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCTTGAAAGTGCGGATGTaGACATTCACCTTCACCCCC +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFLKVRM*TFTFTP
Trigger: GGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAA...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATTTGGTTTCAGGGTCTaGAGTAAATCACAATACCAA +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRFGFRV*SKSQYQ
Trigger: TTGGTATTGTGATTTACTTCAGACCCTGAAACCAAA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAGGTGAAACCATATTCTaGAAGATATTCTACACATGC +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRGETIF*KIFYTC
Trigger: GCATGTGTAGAATATCTTTCAGAATATGGTTTCACC...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTCTGAAGATACTCTTCTaGGAACTTCCATTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTLKILF*ELPLSL
Trigger: AAGGGACAATGGAAGTTCTCAGAAGAGTATCTTCAG...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAACATGGCTTACTATTTaGTTTACTGTCAGGACAACA +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRTWLTI*FTVRTT
Trigger: TGTTGTCCTGACAGTAAAGCAAATAGTAAGCCATGT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTATTAATAAGTTATGGTaGAGAGGAGTATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFINKLW*RGVSPG
Trigger: CCCTGGGGATACTCCTCTGCACCATAACTTATTAAT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATCTAAAGCTGAACATTaGAAACTGACCTTACTAGCA +
Preference number: 4 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRSKAEH*KLTLLA
Trigger: TGCTAGTAAGGTCAGTTTGCAATGTTCAGCTTTAGA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTGCTGGTAATCCACTTTaGGCTTTCGCTTTTTCTTAC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTAGNPL*AFAFSY
Trigger: GTAAGAAAAAGCGAAAGCCCAAAGTGGATTACCAGC...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCCCTAGTGAGAGTCAGTaGAGAATCCCGTTCATATGC +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFPSESQ*RIPFIC
Trigger: GCATATGAACGGGATTCTTCACTGACTCTCACTAGG...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTATTCCACTCATATCATaGCCCCTAAGTCTAATGGAA +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFIPLIS*PLSLME
Trigger: TTCCATTAGACTTAGGGGTCATGATATGAGTGGAAT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACAGAACTTCTTTGGCCTaGCACAAGGGAATAAATCTA +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYRTSLA*HKGINL
Trigger: TAGATTTATTCCCTTGTGTCAGGCCAAAGAAGTTCT...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTTTACTCTCCTCTTACTaGAGATACTCTTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTLLSSY*RYSSEN
Trigger: GTTCTCAGAAGAGTATCTTCAGTAAGAGGAGAGTAA...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AACTCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATGCACTAGTGGAATCTTCAACTaGAGACTTAGAATCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NSEFHWDTRIQHSSNSCTSGIFN*RLRICF
Trigger: GAAGCAGATTCTAAGTCTGCAGTTGAAGATTCCACT...AGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCTTAGGAGGAAGGAATaGAATATGGAAGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSLRRKE*NMEVPE
Trigger: TTCTGGAACTTCCATATTCCATTCCTTCCTCCTAAG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTAGATTACTGTTCACTTaGGTTTGTAAACTGGAACCT +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFRLLFT*VCKLEP
Trigger: AGGTTCCAGTTTACAAACTCAAGTGAACAGTAATCT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAAGAAGTATTTGTGGGTaGTATGGTGTTCCTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSRSICG*YGVPVD
Trigger: GTCAACAGGAACACCATAGCACCCACAAATACTTCT...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTAATCTGCTTCCTTCTTaGAGGAATCTTGAAGTTTCA +
Preference number: 4 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFNLLPS*RNLEVS
Trigger: TGAAACTTCAAGATTCCTCCAAGAAGGAAGCAGATT...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACTTACACCACTACTCTTaGAATCGAATTCATGAGTAC +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYLHHYS*NRIHEY
Trigger: GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAA...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACTTTTCTTGTAGCAGCTaGTATATGAGCAGTGAAACT +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYFSCSS*YMSSET
Trigger: AGTTTCACTGCTCATATACCAGCTGCTACAAGAAAA...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR TCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCACATTCTCGCCTCGAATaGAAATCTGATTTATGTGTC +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSHSRLE*KSDLCV
Trigger: GACACATAAATCAGATTTTCATTCGAGGCGAGAATG...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR GCA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACAAACTTTATTCACCCTaGTTCTCAGAAGGCTTATTT +
Preference number: 4 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYKLYSP*FSEGLF
Trigger: AAATAAGCCTTCTGAGAAGCAGGGTGAATAAAGTTT...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAAACTCAGAGTTTCACTaGGATACTAGGATACAGCAT +
Preference number: 4 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSNSEFH*DTRIQH
Trigger: ATGCTGTATCCTAGTATCCCAGTGAAACTCTGAGTT...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CCA 90 bp CTTCTCAGAAGGCTTATTTATGTTACACAACAAATACAGCAGGGGAAAGTTTTCGGAAGGAATGGAATATaGAAGTTCCAGAAGATACTG +
Preference number: 4 (lower is better)
Translates to: LLRRLIYVTQQIQQGKVFGRNGI*KFQKIL
Trigger: CAGTATCTTCTGGAACTTCCATATTCCATTCCTTCC...GAAAACTTTCCCCTGCTGTATTTGTTGTGTAACATAAATAAGCCTTCTGAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS CCA 90 bp CAGAGGGCTGCCTTCGTGCAAGGGCATTCGCGTGAGCACGTTGCGTaGCGCCTTCCTGCTCCGACCCGGACCCCTCCGGCCCGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QRAAFVQGHSREHVA*RLPAPTRTPPARSC
Trigger: GCAGGAGCGGGCCGGAGGGGTCCGGGTCGGAGCAGGAAGGCGCCACGCAACGTGCTCACGCGAATGCCCTTGCACGAAGGCAGCCCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS GCA 90 bp GTCCTCCCTGACAGCTCTGACCTGGACTCCTCCCTTGCAGAGGCCTaGAGGGAAGAAGGGACAGAGCGGGAACGCTTGTGTGAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: VLPDSSDLDSSLAEA*REEGTERERLCEPR
Trigger: CCGGGGCTCACACAAGCGTTCCCGCTCTGTCCCTTCTTCCCTGCAGGCCTCTGCAAGGGAGGAGTCCAGGTCAGAGCTGTCAGGGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 90 bp AGGAAGCCTGTACAGACGCCCCGAAGTCCCTTGAAAGTGCGGATGTaGACATTCACCTTCACCCCCTCACGGATACAGCGATGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: RKPVQTPRSPLKVRM*TFTFTPSRIQRWSS
Trigger: TGAACTCCATCGCTGTATCCGTGAGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACCCGTCCCCTTCCTCTTaGGCCACCATGAGACGGCGG +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYPSPSS*ATMRRR
Trigger: CCGCCGTCTCATGGTGGCCAAAGAGGAAGGGGACGG...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACACAGAGCGGGAACGCTaGTGTGAGCCCCGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYTERER*CEPRPV
Trigger: CACTGGCCGGGGCTCACACAAGCGTTCCCGCTCTGT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 90 bp TGTCGAATGCAACAAGGAAGCCTGTACAGACGCCCCGAAGTCCCTTaGAAGTGCGGATGTGAACATTCACCTTCACCCCCTCACGGATAC +
Preference number: 5 (lower is better)
Translates to: CRMQQGSLYRRPEVP*KCGCEHSPSPPHGY
Trigger: GTATCCGTGAGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTTGTTGCATTCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGACCCGCTCCTCCATGTTaGAAAGGCCCGCAAGCCGAG +
Preference number: 5 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRPAPPC*KGPQAE
Trigger: CTCGGCTTGCGGGCCTTTCAAACATGGAGGAGCGGG...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAATTCGCGTGAGCACGTaGCGTGGCGCCTTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRIRVST*RGAFLL
Trigger: GAGCAGGAAGGCGCCACGCAACGTGCTCACGCGAAT...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACACCTGGACTCCTCCCTaGCAGAGGCCTGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYTWTPP*QRPAGK
Trigger: CTTCCCTGCAGGCCTCTGCAAGGGAGGAGTCCAGGT...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATCGTACTCCGCCACGTaGTTGAAGCAGGGGGCATTG +
Preference number: 5 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRSYSAT*LKQGAL
Trigger: CAATGCCCCCTGCTTCAACAACGTGGCGGAGTACGA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AGGAATGGAATATGGAAGTTCCAGAAGATACTGCTGCCTTCCGAAGATAGTTACCCTGGGAGGCAGAAGTaGCAGGGAGCTGAGATCGCG +
Preference number: 5 (lower is better)
Translates to: RNGIWKFQKILLPSEDSYPGRQK*QGAEIA
Trigger: CGCGATCTCAGCTCCCTGCAACTTCTGCCTCCCAGG...GTAACTATCTTCGGAAGGCAGCAGTATCTTCTGGAACTTCCATATTCCATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp ATGGAGCCACTCCTATCCACAACTCATAGCAAGGATCTCTATGCATCTAGATTTTACTCCGCCACGTTGTaGAAGCAGGGGGCATTGGGG +
Preference number: 5 (lower is better)
Translates to: MEPLLSTTHSKDLYASRFYSATL*KQGALG
Trigger: CCCCAATGCCCCCTGCTTCAACAACGTGGCGGAGTA...AAATCTAGATGCATAGAGATCCTTGCTATGAGTTGTGGATAGGAGTGGCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACGCCATATTCCAGAACTaGTCGAATGCAACAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHAIFQN*SNATRK
Trigger: CTTCCTTGTTGCATTCGACAAGTTCTGGAATATGGC...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACTACAGTGGTGCAATCTaGGCTCACTGCAAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYYSGAI*AHCKLR
Trigger: GCGGAGCTTGCAGTGAGCCAAGATTGCACCACTGTA...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGATCCATCAACTCAATTaGCCAGAAAGTGCTGACAGA +
Preference number: 5 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMIHQLN*PESADR
Trigger: TCTGTCAGCACTTTCTGGCAAATTGAGTTGATGGAT...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp ACCATGCACAAAGAGCAAGGTACTGACTGGTCTAAAGCCACTCTCCCCGGACACGACATGGCTTACTATTaGCTTTACTGTCAGGACAAC +
Preference number: 5 (lower is better)
Translates to: TMHKEQGTDWSKATLPGHDMAYY*LYCQDN
Trigger: GTTGTCCTGACAGTAAAGCAAATAGTAAGCCATGTC...GTGTCCGGGGAGAGTGGCTTTAGACCAGTCAGTACCTTGCTCTTTGTGCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGATCCCGTTCATATGCTTaGCCTAGGACAGGTTTTCGG +
Preference number: 5 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRSRSYA*PRTGFR
Trigger: CCGAAAACCTGTCCTAGGCAAAGCATATGAACGGGA...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp TCTGGTATGCCATTTGCAGAGGCTACCTCTGGTAAGGGGAAGACTGAAGAGGTCTTCATGATTTTGCCTTaGTCAGCTGCTATGGAAATG +
Preference number: 5 (lower is better)
Translates to: SGMPFAEATSGKGKTEEVFMILP*SAAMEM
Trigger: CATTTCCATAGCAGCTGACAAAGGCAAAATCATGAA...GACCTCTTCAGTCTTCCCCTTACCAGAGGTAGCCTCTGCAAATGGCATACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AGCTCACAGGACAGTTCACACTACGGACAGAGGGGCAATACCACAGGGTACATGAGCAATTGCAAAGTATaGGGAATCACTTTTATGGCT +
Preference number: 5 (lower is better)
Translates to: SSQDSSHYGQRGNTTGYMSNCKV*GITFMA
Trigger: AGCCATAAAAGTGATTCCCAATACTTTGCAATTGCT...CATGTACCCTGTGGTATTGCCCCTCTGTCCGTAGTGTGAACTGTCCTGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACTTCATGCACAACTCTTaGAAGCTGGACATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYFMHNS*KLDMKV
Trigger: GACCTTCATGTCCAGCTTCAAAGAGTTGTGCATGAA...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCAGGAGTATCCCCAGGGTaGCCAAAGAGAAGGCTGATG +
Preference number: 5 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSGVSPG*PKRRLM
Trigger: CATCAGCCTTCTCTTTGGCAACCCTGGGGATACTCC...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp GCAGGGCTCCAAGGCAATTTACACCACTACTCTTGGAATCGAATTCATGAGTACCTTCTTGGAGGAATCTaGAAGTTTCAGCCGATCAAA +
Preference number: 5 (lower is better)
Translates to: AGLQGNLHHYSWNRIHEYLLGGI*KFQPIK
Trigger: TTTGATCGGCTGAAACTTCAAGATTCCTCCAAGAAG...GTACTCATGAATTCGATTCCAAGAGTAGTGGTGTAAATTGCCTTGGAGCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCAAAACAGAGCACTCATaGCTGGCTGCTTTGAGCATA +
Preference number: 5 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSKTEHS*LAALSI
Trigger: TATGCTCAAAGCAGCCAGCAATGAGTGCTCTGTTTT...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp TTTACACCACGATACTCTTACATGAACCTTGACTTTCCTACAGCAACAGTTTCACTGCTCACCTTTTCATaGCATGATGAGCCAGTGGTC +
Preference number: 5 (lower is better)
Translates to: FTPRYSYMNLDFPTATVSLLTFS*HDEPVV
Trigger: GACCACTGGCTCATCATGCAATGAAAAGGTGAGCAG...TGAAACTGTTGCTGTAGGAAAGTCAAGGTTCATGTAAGAGTATCGTGGTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp CAGGACTTGACAATCTCTAAAGGAGCTCCTGGACTCTTTCACCACAAGGATAGAGTTACTGAAAAAGGGTaGACTGCATTCTATATCTGG +
Preference number: 5 (lower is better)
Translates to: QDLTISKGAPGLFHHKDRVTEKG*TAFYIW
Trigger: CCAGATATAGAATGCAGTCAACCCTTTTTCAGTAAC...TCTATCCTTGTGGTGAAAGAGTCCAGGAGCTCCTTTAGAGATTGTCAAGTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCCAGGGCTCAGGATTCTaGCATTTACAACCACTAAGA +
Preference number: 5 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSQGSGF*HLQPLR
Trigger: TCTTAGTGGTTGTAAATGCAAGAATCCTGAGCCCTG...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 90 bp TCTTCAACTGCAGACTTAGAATCTGCTTCCTTCTTGGAGGAATCTTaGAGTTTCAGCCGATCAAATAGCCTAGTGAGAGTCAGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: SSTADLESASFLEES*SFSRSNSLVRVSEE
Trigger: TTCTTCACTGACTCTCACTAGGCTATTTGATCGGCTGAAACTTCAAGATTCCTCCAAGAAGGAAGCAGATTCTAAGTCTGCAGTTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS GCA 90 bp TCAGAGTTTCACTGGGATACTAGGATACAGCATAGCAGCAATTCATaGACTTTATTTCTAAAAACCAAAGCTCAGGCTGAGCTGGTCACT +
Preference number: 5 (lower is better)
Translates to: SEFHWDTRIQHSSNS*TLFLKTKAQAELVT
Trigger: AGTGACCAGCTCAGCCTGAGCTTTGGTTTTTAGAAATAAAGTGCATGAATTGCTGCTATGCTGTATCCTAGTATCCCAGTGAAACTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCTGGAAGATCAGATATTaGGTTTCAGGGTCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSWKIRY*VSGSEV
Trigger: TACTTCAGACCCTGAAACCAAATATCTGATCTTCCA...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS-3UTR CAA 90 bp AAAGTATTGGGAATCACTTTTATGGCTTTCCTAAGGGACAGTCCCCATCTTTCCTTCTATTTCATGATTTaGCCTTTGTCAGCTGCTATG +
Preference number: 5 (lower is better)
Translates to: KVLGITFMAFLRDSPHLSFYFMI*PLSAAM
Trigger: CATAGCAGCTGACAAAGGCAAAATCATGAAATAGAA...GGAAAGATGGGGACTGTCCCTTAGGAAAGCCATAAAAGTGATTCCCAATACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS CAA 72 bp CTCCGGCCCGCTCCTGCGGCCCCGTCCCCTTCCTCTTaGGCCACCATGAGACGGCGGAGGCGCTGGATGCGC +
Preference number: 6 (lower is better)
Translates to: LRPAPAAPSPSS*ATMRRRRRWMR
Trigger: GCGCATCCAGCGCCTCCGCCGTCTCATGGTGGCCAAAGAGGAAGGGGACGGGGCCGCAGGAGCGGGCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS CCA 72 bp GCCTTCGTGCAAGGGCATTCGCGTGAGCACGTTGCGTaGCGCCTTCCTGCTCCGACCCGGACCCCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: AFVQGHSREHVA*RLPAPTRTPPA
Trigger: GGCCGGAGGGGTCCGGGTCGGAGCAGGAAGGCGCCACGCAACGTGCTCACGCGAATGCCCTTGCACGAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS CAA 72 bp GGGCTGCCTTCGTGCAAGGGCATTCGCGTGAGCACGTaGCGTGGCGCCTTCCTGCTCCGACCCGGACCCCTC +
Preference number: 6 (lower is better)
Translates to: GLPSCKGIRVST*RGAFLLRPGPL
Trigger: GAGGGGTCCGGGTCGGAGCAGGAAGGCGCCACGCAACGTGCTCACGCGAATGCCCTTGCACGAAGGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 72 bp CACCCAGAGGGCTGCCTTCGTGCAAGGGCATTCGCGTaGGCACGTTGCGTGGCGCCTTCCTGCTCCGACCCG +
Preference number: 6 (lower is better)
Translates to: HPEGCLRARAFA*ARCVAPSCSDP
Trigger: CGGGTCGGAGCAGGAAGGCGCCACGCAACGTGCTCACGCGAATGCCCTTGCACGAAGGCAGCCCTCTGGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 72 bp GTACAGACGCCCCGAAGTCCCTTGAAAGTGCGGATGTaGACATTCACCTTCACCCCCTCACGGATACAGCGA +
Preference number: 6 (lower is better)
Translates to: VQTPRSPLKVRM*TFTFTPSRIQR
Trigger: TCGCTGTATCCGTGAGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS TCA 72 bp CAACAAGGAAGCCTGTACAGACGCCCCGAAGTCCCTTaGAAGTGCGGATGTGAACATTCACCTTCACCCCCT +
Preference number: 6 (lower is better)
Translates to: QQGSLYRRPEVP*KCGCEHSPSPP
Trigger: AGGGGGTGAAGGTGAATGTTCACATCCGCACTTTCAAGGGACTTCGGGGCGTCTGTACAGGCTTCCTTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS GCA 72 bp CACATCAGTAAGTGCCATATTCCAGAACTTGTCGAATaGAACAAGGAAGCCTGTACAGACGCCCCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: HISKCHIPELVE*NKEACTDAPKS
Trigger: GGACTTCGGGGCGTCTGTACAGGCTTCCTTGTTGCATTCGACAAGTTCTGGAATATGGCACTTACTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000286307.6
CDS CAA 72 bp GTCTCATCCACATCAGTAAGTGCCATATTCCAGAACTaGTCGAATGCAACAAGGAAGCCTGTACAGACGCCC +
Preference number: 6 (lower is better)
Translates to: VSSTSVSAIFQN*SNATRKPVQTP
Trigger: GGGCGTCTGTACAGGCTTCCTTGTTGCATTCGACAAGTTCTGGAATATGGCACTTACTGATGTGGATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000286307.6