Pregenerated sensors for LSM10 (Homo sapiens)
Ensembl gene IDs: ENSG00000181817Ensembl transcript IDs: ENST00000315732.3, ENST00000476041.1, ENST00000489912.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGAAAGGCAGCTTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTaGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: VKGSFDRWCLLDTSF*PGPAFFSGTRQGVR Trigger: CCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAAGCTGCCTTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTTGGAGGACTCCGAGTTaGGGCCAGGGCTTGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: WPCFLLGYQTGCEGRELAWRTPS*GQGLLR Trigger: CCTCAGCAAGCCCTGGCCCCAACTCGGAGTCCTCCA...AGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR-3UTR CCA 90 bp | TTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCAGCTCCGGAGATCACTaGAGGACTCCGAGTTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: FDRWCLLDTSFWPGPAFFSSGDH*RTPSWG Trigger: GCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCT...GAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR TCA 72 bp | CTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTaGGGGCAGGGAACTAGCTCCGGAGATCACTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LALLSSRVPDRV*GQGTSSGDHWR Trigger: CCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR GCA 72 bp | GTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTaGTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: VVSVGHQLLAWP*FLLGYQTGCEG Trigger: GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR-3UTR CAA 90 bp | TTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCTCTGGAGGACTCCGAGTaGGGGCCAGGGCTTGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LTGGVCWTPASGLALLSSLEDSE*GPGLAE Trigger: CTCAGCAAGCCCTGGCCCCAACTCGGAGTCCTCCAG...AGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR CCA 72 bp | AGCTTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTaGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAG | + |
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Preference number: 3 (lower is better) Translates to: SFDRWCLLDTSF*PGPAFFSGTRQ Trigger: CTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCTCCGCTTTCCCCGTCTaGGTCGCCGCCGAAGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGSAFPV*VAAEAS Trigger: GCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGA...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTCCGGAGATCACTGGAGGAAGGACGGAGAAACCATaGCGGCGACCGGGCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GYQTGCEGRELAPEITGGRTEKP*RRPGRS Trigger: AGAGCGGCCCGGTCGCCGGCATGGTTTCTCCGTCCT...TCCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTACTGCCTCCCGCCGGCTaGAGCAGGACGGAGAAACCA | + |
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Preference number: 4 (lower is better) Translates to: AWPCFLLGYQTGCEGRELLPPAG*SRTEKP Trigger: TGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAG...TAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | AGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGGCTTGCCGGCCCTGGAGGCCCTaGAGTAGGATGATCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RELAPEITGGLRVGARACRPWRP*SRMIRL Trigger: CAGCCTGATCATCCTACTGCAGGGCCTCCAGGGCCG...GCAAGCCCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCGTGGTTACCCGGCCCTaGAGGCCCTGCAGTAGGATG | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGVVTRP*RPCSRM Trigger: CATCCTACTGCAGGGCCTCCAGGGCCGGGTAACCAC...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCTGGAGGACTCCGAGTTaGGGCCAGGGCTTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGWRTPS*GQGLLR Trigger: CCTCAGCAAGCCCTGGCCCCAACTCGGAGTCCTCCA...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCTCATCCAGCTTGACCTaGTGCCCCCAACGGTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGSSSLT*CPQRSV Trigger: CACGGACCGTTGGGGGCATCAGGTCAAGCTGGATGA...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | AGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGGCTTGCAACGGTCCGTGTAGGTaGCTTTGGCCAGGCGGATGT | + |
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Preference number: 4 (lower is better) Translates to: RELAPEITGGLRVGARACNGPCR*LWPGGC Trigger: ACATCCGCCTGGCCAAAGTCACCTACACGGACCGTT...GCAAGCCCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | TTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCCCCGCAGGTCCACAGTaGTTACCCGGCCCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FDRWCLLDTSFWPGPAFFPAGPQ*LPGPGG Trigger: GCCTCCAGGGCCGGGTAACCACTGTGGACCTGCGGG...GAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | CCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTCCGAGCTCCGGAGATCACTaGAGGACTCCGAGTTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PCFLLGYQTGCEGRELAPSSGDH*RTPSWG Trigger: GCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCT...CGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGAGTGAGTCTGGGAGGTaGAACCCTGTGAAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EGRELAPEITGGLRVGARSESGR*NPVKGS Trigger: GCTGCCTTTCACAGGGTTCCACCTCCCAGACTCACT...CCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCGGCCCTGCAGTAGGATaGTCAGGCTGTTCTCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGGPAVG*SGCSQR Trigger: TCTCTGAGAACAGCCTGATCATCCTACTGCAGGGCC...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | TGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTACCGGCCTTGGCCCTTaGCACCAAAGTTTCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: WPCFLLGYQTGCEGRELATGLGP*HQSFAP Trigger: GGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCGGT...AGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTCTGGCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCGGCAGCTTTGACAGGTaGTGTCTGTTGGACACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QLLAWPCFLLGYQTGCEGGSFDR*CLLDTS Trigger: GCTGGTGTCCAACAGACACCACCTGTCAAAGCTGCC...GCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | AGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGGCTTGCTTCTTCCACACCAGCTaGCTGCTTGCACGCGACATT | + |
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Preference number: 4 (lower is better) Translates to: RELAPEITGGLRVGARACFFHTS*LLARDI Trigger: AATGTCGCGTGCAAGCAGGCAGCTGGTGTGGAAGAA...GCAAGCCCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GCCTGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTACATCGACATTGTCTATaGGTCCGTGGGCCACGCTCT | + |
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Preference number: 4 (lower is better) Translates to: AWPCFLLGYQTGCEGRELHRHCL*VRGPRS Trigger: AGAGCGTGGCCCACGGACGCATAGACAATGTCGATG...TAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | AGCTTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCGGTCCGCTCCTTCACTaGATGGCTCACCGCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SFDRWCLLDTSFWPGPAFGPLLH*MAHRHS Trigger: AGAATGGCGGTGAGCCATTCAGTGAAGGAGCGGACC...GAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | CCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTCCGGCTCAATGGTCGAGGTaGTGTTCACGTCATCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PCFLLGYQTGCEGRELAPAQWSR*CSRHLG Trigger: TCCCAGATGACGTGAACATCACCTCGACCATTGAGC...CGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | ACCTACCCCAAGGCCACATATAGGATTCTGGGTCCCAGAGTGAGTCTGGGAGGTTTCTGGGTCCCAGAGTaGGTCTGGGAGGTGGAACCC | + |
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Preference number: 4 (lower is better) Translates to: TYPKATYRILGPRVSLGGFWVPE*VWEVEP Trigger: GGGTTCCACCTCCCAGACTCACTCTGGGACCCAGAA...ACCTCCCAGACTCACTCTGGGACCCAGAATCCTATATGTGGCCTTGGGGTAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GGGTGTGAGGGCAGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGACCCGATGGATAATCTaGAGCTGCTGCTCAATGGTC | + |
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Preference number: 4 (lower is better) Translates to: GCEGRELAPEITGGLRVGTRWII*SCCSMV Trigger: GACCATTGAGCAGCAGCTGCAGATTATCCATCGGGT...CCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTCACACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | AGGGGGATTGTCACCTACCCCAAGGCCACATATAGGATTCTGGGTCCCAGAGTGTTGTCTATGCGTCCGTaGGCCACGCTCTCATCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RGIVTYPKATYRILGPRVLSMRP*ATLSSR Trigger: GCGGGATGAGAGCGTGGCCCACGGACGCATAGACAA...CACTCTGGGACCCAGAATCCTATATGTGGCCTTGGGGTAGGTGACAATCCCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | ACCTACCCCAAGGCCACATATAGGATTCTGGGTCCCAGAGTGAGTCTGGGAGGTAGAGGTCATCCAGCTTaGCCTGATGCCCCCAACGGT | + |
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Preference number: 4 (lower is better) Translates to: TYPKATYRILGPRVSLGGRGHPA*PDAPNG Trigger: ACCGTTGGGGGCATCAGGTCAAGCTGGATGACCTCT...ACCTCCCAGACTCACTCTGGGACCCAGAATCCTATATGTGGCCTTGGGGTAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTCCGGAGATCACTGGAGGATGGATAATCTGCAGCTaGTGCTCAATGGTCGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GYQTGCEGRELAPEITGGWIICS*CSMVEV Trigger: CACCTCGACCATTGAGCAGCAGCTGCAGATTATCCA...TCCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | ACCTACCCCAAGGCCACATATAGGATTCTGGGTCCCAGAGTGAGTCTGGGAGGTCTTCTGGCCTGGCCCTaGTTTCTTCTCGGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: TYPKATYRILGPRVSLGGLLAWP*FLLGYQ Trigger: CTGGTACCCGAGAAGAAAGCAGGGCCAGGCCAGAAG...ACCTCCCAGACTCACTCTGGGACCCAGAATCCTATATGTGGCCTTGGGGTAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | CCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTCCGCCAGGCGGATGTTCATaGAAGCATCGACATTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: PCFLLGYQTGCEGRELAPPGGCS*KHRHCL Trigger: TAGACAATGTCGATGCTTTCATGAACATCCGCCTGG...CGGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | TTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCGGAGGTGGAACCCTGTaGAAGGCAGCTTTGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: FDRWCLLDTSFWPGPAFFGGGTL*KAALTG Trigger: ACCTGTCAAAGCTGCCTTTCACAGGGTTCCACCTCC...GAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | TTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCGGACGTAGCGGACATTaGGGCCTGTCACAAAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: FDRWCLLDTSFWPGPAFFGRSGH*GLSQRG Trigger: ACCTCTTTGTGACAGGCCGCAATGTCCGCTACGTCC...GAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | TGGCCCTGCTTTCTTCTCGGGTACCAGACAGGGTGTGAGGGCAGGGAACTAGCTGGCTGTTCTCAGAGATaGTCCGCTCCTTCACTGAAT | + |
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Preference number: 4 (lower is better) Translates to: WPCFLLGYQTGCEGRELAGCSQR*SAPSLN Trigger: ATTCAGTGAAGGAGCGGACCATCTCTGAGAACAGCC...AGCTAGTTCCCTGCCCTCACACCCTGTCTGGTACCCGAGAAGAAAGCAGGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | AGCTTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCAATTCCCACCGGCCTTaGCCCTTGCCACCAAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: SFDRWCLLDTSFWPGPAFNSHRP*PLPPKF Trigger: AAACTTTGGTGGCAAGGGCCAAGGCCGGTGGGAATT...GAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | TTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCTGATGTTCACGTCATCTaGGATGTGGACGTAGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: LTGGVCWTPASGLALLSSDVHVI*DVDVAD Trigger: GTCCGCTACGTCCACATCCCAGATGACGTGAACATC...AGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | AGGGGGATTGTCACCTACCCCAAGGCCACATATAGGATTCTGGGTCCCAGAGTGTGTGAAAGGCAGCTTTaGCAGGTGGTGTCTGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGIVTYPKATYRILGPRVCERQL*QVVSVG Trigger: TCCAACAGACACCACCTGTCAAAGCTGCCTTTCACA...CACTCTGGGACCCAGAATCCTATATGTGGCCTTGGGGTAGGTGACAATCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CCA 90 bp | TTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCTTCTAAGTTTCGCACCCGATaGATAATCTGCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LTGGVCWTPASGLALLSSKFRTR*IICSCC Trigger: GCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTT...AGAAGAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | GGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTCACGTACCAGACAGGGTGTaGGGGCAGGGAACTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GSIINKSEIQIIKKGDCHVPDRV*GQGTSS Trigger: GGAGCTAGTTCCCTGCCCTCACACCCTGTCTGGTAC...GTGACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR TCA 90 bp | ACAGGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTGGGGCCAGGGCTTGCTaGGGGCCTCACTTACAGTTT | + |
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Preference number: 4 (lower is better) Translates to: TGSIINKSEIQIIKKGDCGARAC*GPHLQF Trigger: AAACTGTAAGTGAGGCCCTCAGCAAGCCCTGGCCCC...ACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR GCA 90 bp | GGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTCACATAATCTGCAGCTGCTaGTCAATGGTCGAGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: GSIINKSEIQIIKKGDCHIICSC*SMVEVM Trigger: CATCACCTCGACCATTGAGCAGCAGCTGCAGATTAT...GTGACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| 3UTR CAA 72 bp | TGTTTAATTATCCTCACTGGGAGAGTTGAAAACTACTaGACAGGTTCCATAATCAATAAGTCAGAGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: CLIILTGRVENY*TGSIINKSEIQ Trigger: CTGAATCTCTGACTTATTGATTATGGAACCTGTCAAGTAGTTTTCAACTCTCCCAGTGAGGATAATTAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS GCA 90 bp | GCCGCCGAAGCTAGCGGGCGCCTGGACTGGCTGCCTCCCGCCGGCTaGAGCAGGACGGAGAAACCATGCCGGCGACCGGGCCGCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: AAEASGRLDWLPPAG*SRTEKPCRRPGRSV Trigger: GACAGAGCGGCCCGGTCGCCGGCATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS GCA 90 bp | TCCCCGTCTGGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGGCTaGCTCCCGCCGGCTGCAGCAGGACGGAGAAACCATGCCGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SPSGSPPKLAGAWTG*LPPAAAGRRNHAGD Trigger: GTCGCCGGCATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315732.3 ENST00000476041.1 ENST00000489912.1 |
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| CDS CCA 90 bp | GCTTTCCCCGTCTGGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTaGCTGCCTCCCGCCGGCTGCAGCAGGACGGAGAAACCATGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AFPVWVAAEASGRLD*LPPAGCSRTEKPCR Trigger: CCGGCATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315732.3 ENST00000476041.1 ENST00000489912.1 |
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| CDS CCA 90 bp | GCCGACCCGGACCCACCACGCGACATTCCTTCCGCTTTCCCCGTCTaGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGGCTGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: ADPDPPRDIPSAFPV*VAAEASGRLDWLPP Trigger: GGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGAAGGAATGTCGCGTGGTGGGTCCGGGTCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489912.1 |
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| CDS CCA 90 bp | CTTCCGCTTTCCCCGTCTGGGTCGCCGCCGAAGCTAGCGGGCGCCTaGACTGGCTGCCTCCCGCCGGCTGCAGCAGGACGGAGAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: LPLSPSGSPPKLAGA*TGCLPPAAAGRRNH Trigger: ATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000315732.3 ENST00000476041.1 ENST00000489912.1 |
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| CDS CCA 90 bp | ACCAGCTGCCTGCTTGCACGCGACATTCCTTCCGCTTTCCCCGTCTaGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGGCTGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: TSCLLARDIPSAFPV*VAAEASGRLDWLPP Trigger: GGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGAAGGAATGTCGCGTGCAAGCAGGCAGCTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS-3UTR CAA 90 bp | GAGGGCAGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGCACCGGCCTTGGCCCTaGCCACCAAAGTTTCGCACC | + |
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Preference number: 5 (lower is better) Translates to: EGRELAPEITGGLRVGARHRPWP*PPKFRT Trigger: GGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCGGTG...CCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCTGCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS CCA 90 bp | GCCAGGCGGATGTTCATGAAAGCATCGACATTGTCTATGCGTCCGTaGGCCACGCTCTCATCCCGCAGGTCCACAGTGGTTACCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ARRMFMKASTLSMRP*ATLSSRRSTVVTRP Trigger: GGGCCGGGTAACCACTGTGGACCTGCGGGATGAGAGCGTGGCCCACGGACGCATAGACAATGTCGATGCTTTCATGAACATCCGCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS CCA 90 bp | ACACACGGGCACACATGTGGGAGAGGTCTGCAAGGGAAGCTGCTGTaGGACTCCCACCAGTTCCTCATCTCTCTCCCCACTTGCGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: THGHTCGRGLQGKLL*DSHQFLISLPTCEG Trigger: ACCCTCGCAAGTGGGGAGAGAGATGAGGAACTGGTGGGAGTCCCACAGCAGCTTCCCTTGCAGACCTCTCCCACATGTGTGCCCGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS-3UTR CAA 90 bp | AGGGAACTAGCTCCGGAGATCACTGGAGGACTCCGAGTTGGGGCCAGGGCTTGCAAATTCCCACCGGCCTaGGCCCTTGCCACCAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: RELAPEITGGLRVGARACKFPPA*ALATKV Trigger: AACTTTGGTGGCAAGGGCCAAGGCCGGTGGGAATTT...GCAAGCCCTGGCCCCAACTCGGAGTCCTCCAGTGATCTCCGGAGCTAGTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS GCA 90 bp | TTCTCACACACGGGCACACATGTGGGAGAGGTCTGCAAGGGAAGCTaGTGTGGGACTCCCACCAGTTCCTCATCTCTCTCCCCACTTGCG | + |
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Preference number: 5 (lower is better) Translates to: FSHTGTHVGEVCKGS*CGTPTSSSSLSPLA Trigger: CGCAAGTGGGGAGAGAGATGAGGAACTGGTGGGAGTCCCACAGCAGCTTCCCTTGCAGACCTCTCCCACATGTGTGCCCGTGTGTGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 90 bp | GCCCTCTTCCATTTCTCACACACGGGCACACATGTGGGAGAGGTCTaGAAGGGAAGCTGCTGTGGGACTCCCACCAGTTCCTCATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALFHFSHTGTHVGEV*KGSCCGTPTSSSSL Trigger: GAGAGATGAGGAACTGGTGGGAGTCCCACAGCAGCTTCCCTTGCAGACCTCTCCCACATGTGTGCCCGTGTGTGAGAAATGGAAGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 90 bp | CGGCCTTGGCCCTTGCCACCAAAGTTTCGCACCCGATGGATAATCTaGAGCTGCTGCTCAATGGTCGAGGTGATGTTCACGTCATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: RPWPLPPKFRTRWII*SCCSMVEVMFTSSG Trigger: CCCAGATGACGTGAACATCACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS GCA 90 bp | ACTTGCGAGGGTATGGTGACGTTCCCACAGCGAAGGCCTTCCCTCTaGACCTGCCCTCTGGTTTCTCTTTCCAGCAGTCACTTTGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TCEGMVTFPQRRPSL*TCPLVSLSSSHFVV Trigger: CACCACAAAGTGACTGCTGGAAAGAGAAACCAGAGGGCAGGTGCAGAGGGAAGGCCTTCGCTGTGGGAACGTCACCATACCCTCGCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 90 bp | AGAAGCCCTTGGTGTGCCATCACAGCCTCAGAGCTCGACCTTTCCTaGATCCCTAAGCCGAACCCCCAGCTAAGCCCTCTTCCATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: RSPWCAITASELDLS*IPKPNPQLSPLPFL Trigger: GAGAAATGGAAGAGGGCTTAGCTGGGGGTTCGGCTTAGGGATGCAGGAAAGGTCGAGCTCTGAGGCTGTGATGGCACACCAAGGGCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS CCA 90 bp | AATTCCCACCGGCCTTGGCCCTTGCCACCAAAGTTTCGCACCCGATaGATAATCTGCAGCTGCTGCTCAATGGTCGAGGTGATGTTCACG | + |
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Preference number: 5 (lower is better) Translates to: NSHRPWPLPPKFRTR*IICSCCSMVEVMFT Trigger: CGTGAACATCACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCGGTGGGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS-3UTR CAA 90 bp | AGCTTTGACAGGTGGTGTCTGTTGGACACCAGCTTCTGGCCTGGCCCTGCTTTCATGAAAGCATCGACATaGTCTATGCGTCCGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SFDRWCLLDTSFWPGPAFMKAST*SMRPWA Trigger: GGCCCACGGACGCATAGACAATGTCGATGCTTTCAT...GAAAGCAGGGCCAGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTCAAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTGAAAACTACTTGACAGGTTCCATAATCAATAAGTCAGAGATTCAGATCCTGGAGGACTCCGAGTaGGGGCCAGGGCTTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RVENYLTGSIINKSEIQILEDSE*GPGLAE Trigger: CTCAGCAAGCCCTGGCCCCAACTCGGAGTCCTCCAG...GATCTGAATCTCTGACTTATTGATTATGGAACCTGTCAAGTAGTTTTCAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CAA 90 bp | ACAGGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTAGTTGGGGCCAGGGCTaGCTGAGGGCCTCACTTACA | + |
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Preference number: 5 (lower is better) Translates to: TGSIINKSEIQIIKKGDCSWGQG*LRASLT Trigger: TGTAAGTGAGGCCCTCAGCAAGCCCTGGCCCCAACT...ACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CAA 90 bp | GGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTCACGACAGGTGGTGTCTGTaGGACACCAGCTTCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: GSIINKSEIQIIKKGDCHDRWCL*DTSFWP Trigger: AGGCCAGAAGCTGGTGTCCAACAGACACCACCTGTC...GTGACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS-3UTR CAA 90 bp | ACAGGTTCCATAATCAATAAGTCAGAGATTCAGATCATCAAAAAGGGGGATTGTCTCACTTACAGTTTTTaGGGGGAAATTCCCACCGGC | + |
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Preference number: 5 (lower is better) Translates to: TGSIINKSEIQIIKKGDCLTYSF*GEIPTG Trigger: GCCGGTGGGAATTTCCCCCAAAAAACTGTAAGTGAG...ACAATCCCCCTTTTTGATGATCTGAATCTCTGACTTATTGATTATGGAACCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS GCA 72 bp | CTGCCTCCCGCCGGCTGCAGCAGGACGGAGAAACCATaGCGGCGACCGGGCCGCTCTGTCCTCCGGGCGCAG | + |
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Preference number: 6 (lower is better) Translates to: LPPAGCSRTEKP*RRPGRSVLRAQ Trigger: CTGCGCCCGGAGGACAGAGCGGCCCGGTCGCCGGCATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000315732.3 |
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| CDS GCA 72 bp | GCTAGCGGGCGCCTGGACTGGCTGCCTCCCGCCGGCTaGAGCAGGACGGAGAAACCATGCCGGCGACCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ASGRLDWLPPAG*SRTEKPCRRPG Trigger: GCCCGGTCGCCGGCATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS GCA 72 bp | GGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGGCTaGCTCCCGCCGGCTGCAGCAGGACGGAGAAACCAT | + |
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Preference number: 6 (lower is better) Translates to: GSPPKLAGAWTG*LPPAAAGRRNH Trigger: ATGGTTTCTCCGTCCTGCTGCAGCCGGCGGGAGGCAGCCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315732.3 ENST00000476041.1 ENST00000489912.1 |
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| CDS CCA 72 bp | GACCCACCACGCGACATTCCTTCCGCTTTCCCCGTCTaGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: DPPRDIPSAFPV*VAAEASGRLDW Trigger: CCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGAAGGAATGTCGCGTGGTGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489912.1 |
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| CDS CCA 72 bp | CTGCTTGCACGCGACATTCCTTCCGCTTTCCCCGTCTaGGTCGCCGCCGAAGCTAGCGGGCGCCTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LLARDIPSAFPV*VAAEASGRLDW Trigger: CCAGTCCAGGCGCCCGCTAGCTTCGGCGGCGACCCAGACGGGGAAAGCGGAAGGAATGTCGCGTGCAAGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS CAA 90 bp | GAAGCTGCTGTGGGACTCCCACCAGTTCCTCATCTCTCTCCCCACTaGCGAGGGTATGGTGACGTTCCCACAGCGAAGGCCTTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: EAAVGLPPVPHLSPH*RGYGDVPTAKAFPL Trigger: CAGAGGGAAGGCCTTCGCTGTGGGAACGTCACCATACCCTCGCAAGTGGGGAGAGAGATGAGGAACTGGTGGGAGTCCCACAGCAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 72 bp | ACGGGCACACATGTGGGAGAGGTCTGCAAGGGAAGCTaGTGTGGGACTCCCACCAGTTCCTCATCTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TGTHVGEVCKGS*CGTPTSSSSLS Trigger: GGAGAGAGATGAGGAACTGGTGGGAGTCCCACAGCAGCTTCCCTTGCAGACCTCTCCCACATGTGTGCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS CCA 72 bp | GGAGCGGGTCTGGGGAAAGGAGCTATACTCGGTAAATaGGGAAGAAAACGCTTCCTGGGCTCCGGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAGLGKGAILGK*GRKRFLGSGTS Trigger: GGAGGTGCCGGAGCCCAGGAAGCGTTTTCTTCCCCATTTACCGAGTATAGCTCCTTTCCCCAGACCCGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489912.1 |
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| CDS CAA 72 bp | GCTTCCCTTGCTGCTCTGCTGAGGACGGAGAAGCCCTaGGTGTGCCATCACAGCCTCAGAGCTCGACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLAALLRTEKP*VCHHSLRARPF Trigger: GAAAGGTCGAGCTCTGAGGCTGTGATGGCACACCAAGGGCTTCTCCGTCCTCAGCAGAGCAGCAAGGGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 72 bp | TGGTGTGCCATCACAGCCTCAGAGCTCGACCTTTCCTaGATCCCTAAGCCGAACCCCCAGCTAAGCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: WCAITASELDLS*IPKPNPQLSPL Trigger: AAGAGGGCTTAGCTGGGGGTTCGGCTTAGGGATGCAGGAAAGGTCGAGCTCTGAGGCTGTGATGGCACACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS GCA 72 bp | CTTGCTGCTCTGCTGAGGACGGAGAAGCCCTTGGTGTaGCATCACAGCCTCAGAGCTCGACCTTTCCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LAALLRTEKPLV*HHSLRARPFLH Trigger: ATGCAGGAAAGGTCGAGCTCTGAGGCTGTGATGGCACACCAAGGGCTTCTCCGTCCTCAGCAGAGCAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476041.1 |
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| CDS CCA 72 bp | CGGCCTTGGCCCTTGCCACCAAAGTTTCGCACCCGATaGATAATCTGCAGCTGCTGCTCAATGGTCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: RPWPLPPKFRTR*IICSCCSMVEV Trigger: CACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGGCAAGGGCCAAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS CCA 72 bp | GAGCTATACTCGGTAAATGGGGAAGAAAACGCTTCCTaGGCTCCGGCACCTCCTTCCGGAGGTCCTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: ELYSVNGEENAS*APAPPSGGPGI Trigger: GATGCCAGGACCTCCGGAAGGAGGTGCCGGAGCCCAGGAAGCGTTTTCTTCCCCATTTACCGAGTATAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489912.1 |
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| CDS CCA 72 bp | CCAGCTGCCTGCTTGTCAGAGCAGCGGGAGCGGGTCTaGGGAAAGGAGCTATACTCGGTAAATGGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PAACLSEQRERV*GKELYSVNGEE Trigger: TTCTTCCCCATTTACCGAGTATAGCTCCTTTCCCCAGACCCGCTCCCGCTGCTCTGACAAGCAGGCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489912.1 |
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| CDS TCA 72 bp | GATCAGGCTGTTCTCAGAGATGGTCCGCTCCTTCACTaGATGGCTCACCGCCATTCTTCCACACCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DQAVLRDGPLLH*MAHRHSSTPAA Trigger: GGCAGCTGGTGTGGAAGAATGGCGGTGAGCCATTCAGTGAAGGAGCGGACCATCTCTGAGAACAGCCTGATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000315732.3 ENST00000476041.1 ENST00000489912.1 |
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| CDS CCA 72 bp | CTGCTGCTCAATGGTCGAGGTGATGTTCACGTCATCTaGGATGTGGACGTAGCGGACATTGCGGCCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: LLLNGRGDVHVI*DVDVADIAACH Trigger: GTGACAGGCCGCAATGTCCGCTACGTCCACATCCCAGATGACGTGAACATCACCTCGACCATTGAGCAGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS CAA 72 bp | ACTTTGGCCAGGCGGATGTTCATGAAAGCATCGACATaGTCTATGCGTCCGTGGGCCACGCTCTCATCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TLARRMFMKAST*SMRPWATLSSR Trigger: GCGGGATGAGAGCGTGGCCCACGGACGCATAGACAATGTCGATGCTTTCATGAACATCCGCCTGGCCAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS GCA 72 bp | CCCTTGCCACCAAAGTTTCGCACCCGATGGATAATCTaGAGCTGCTGCTCAATGGTCGAGGTGATGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: PLPPKFRTRWII*SCCSMVEVMFT Trigger: CGTGAACATCACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGGCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS GCA 72 bp | CCAAAGTTTCGCACCCGATGGATAATCTGCAGCTGCTaGTCAATGGTCGAGGTGATGTTCACGTCATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PKFRTRWIICSC*SMVEVMFTSSG Trigger: CCCAGATGACGTGAACATCACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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| CDS GCA 72 bp | CCACCAAAGTTTCGCACCCGATGGATAATCTGCAGCTaGTGCTCAATGGTCGAGGTGATGTTCACGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: PPKFRTRWIICS*CSMVEVMFTSS Trigger: AGATGACGTGAACATCACCTCGACCATTGAGCAGCAGCTGCAGATTATCCATCGGGTGCGAAACTTTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000315732.3 ENST00000476041.1 |
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