Pregenerated sensors for LSINCT5 (Homo sapiens)
Ensembl gene IDs: ENSG00000281560Ensembl transcript IDs: ENST00000626215.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCTGTCTCCTCCAGCTCCAAAGCCAAGCCTGGGTGGGCTCTCCTaGTCGGGGCTCCAGTCCGCAATAGCCCAGGGTGGGGTCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PLSPPAPKPSLGGLS*SGLQSAIAQGGVLP Trigger: AGGCAGGACCCCACCCTGGGCTATTGCGGACTGGAGCCCCGAGCAGGAGAGCCCACCCAGGCTTGGCTTTGGAGCTGGAGGAGACAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | AGCCCGGGCCCTCCTGAGAGACAGCTTGATGCATCCCAGCAGGGGTaGGTGGAAGGTGCCCAGCTCTCTGCGCCAGGCAGGGCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPGPPERQLDASQQG*VEGAQLSAPGRAEQ Trigger: CTGCTCAGCCCTGCCTGGCGCAGAGAGCTGGGCACCTTCCACCCACCCCTGCTGGGATGCATCAAGCTGTCTCTCAGGAGGGCCCGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | CTGTCACCCCATGATGAGGTAGGGTTTCCCACCCTGGACAGGTGTTaGCCCTGCTGCTGGTCTTCTGGGTCCACAGTGGTCCTGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSPHDEVGFPTLDRC*PCCWSSGSTVVLWP Trigger: TGGCCACAGGACCACTGTGGACCCAGAAGACCAGCAGCAGGGCCAACACCTGTCCAGGGTGGGAAACCCTACCTCATCATGGGGTGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | CAGGCAGAGAGAGTGTTCAAAGCCCAGTCAGACCAAAGACCCAGCTaGGGCAGCAGCTCCCCCGAGAGCGGGGGAGACATTTCTGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: QAERVFKAQSDQRPS*GSSSPESGGDISEA Trigger: GGCTTCAGAAATGTCTCCCCCGCTCTCGGGGGAGCTGCTGCCCCAGCTGGGTCTTTGGTCTGACTGGGCTTTGAACACTCTCTCTGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | GTTCCAGTGGAGGCTGAGCTTGCCTTTCCGGGAGAGGCTACATTGTaGGGCAAGGCAGGCAGGGACCTTCGGCAAGCTCCTTTTCTACCC | + |
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Preference number: 5 (lower is better) Translates to: VPVEAELAFPGEATL*GKAGRDLRQAPFLP Trigger: GGGTAGAAAAGGAGCTTGCCGAAGGTCCCTGCCTGCCTTGCCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTCCACTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS GCA 90 bp | TGGGGCAAGGCAGGCAGGGACCTTCGGCAAGCTCCTTTTCTACCCTaGAGTTCAGAGGTTTGTAGCTGGCAGGCTGAGTGGGTGGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: WGKAGRDLRQAPFLP*SSEVCSWQAEWVEV Trigger: AACCTCCACCCACTCAGCCTGCCAGCTACAAACCTCTGAACTGCAGGGTAGAAAAGGAGCTTGCCGAAGGTCCCTGCCTGCCTTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | GGGTGGGCTCTCCTGCTCGGGGCTCCAGTCCGCAATAGCCCAGGGTaGGGTCCTGCCTATGGGTACTTTGCAGGTCCATATTTCAGTATT | + |
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Preference number: 5 (lower is better) Translates to: GWALLLGAPVRNSPG*GPAYGYFAGPYFSI Trigger: AATACTGAAATATGGACCTGCAAAGTACCCATAGGCAGGACCCCACCCTGGGCTATTGCGGACTGGAGCCCCGAGCAGGAGAGCCCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 90 bp | GCCAACTATAGGACACAGATGTCAGATGTGGGTTCCAGTGGAGGCTaGGCTTGCCTTTCCGGGAGAGGCTACATTGTGGGGCAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: ANYRTQMSDVGSSGG*ACLSGRGYIVGQGR Trigger: CCTGCCTTGCCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTCCACTGGAACCCACATCTGACATCTGTGTCCTATAGTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 90 bp | TCCACTCAGCAGGCAAGAGCCTCAAGACCAGACACCCCTTGCCGGTaGCAGAGCATCGGTTGGGTACCACAGCAGACCTATGATGCTATT | + |
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Preference number: 5 (lower is better) Translates to: STQQARASRPDTPCR*QSIGWVPQQTYDAI Trigger: AATAGCATCATAGGTCTGCTGTGGTACCCAACCGATGCTCTGTCACCGGCAAGGGGTGTCTGGTCTTGAGGCTCTTGCCTGCTGAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 90 bp | TTCTACCCTGCAGTTCAGAGGTTTGTAGCTGGCAGGCTGAGTGGGTaGAGGTTGAGGCAGCACCTGCAGTGTGAGAACTTTTGGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: FYPAVQRFVAGRLSG*RLRQHLQCENFWDL Trigger: CAAGTCCCAAAAGTTCTCACACTGCAGGTGCTGCCTCAACCTCCACCCACTCAGCCTGCCAGCTACAAACCTCTGAACTGCAGGGTAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 90 bp | AGCTTCCAAATGCTTTCCAAAGGCTCCCAGGTGGACTTGACCAGCTaGAAAGCAGTTCTTGATCTTCGGCAGGAAGCATGCTATCATAAA | + |
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Preference number: 5 (lower is better) Translates to: SFQMLSKGSQVDLTS*KAVLDLRQEACYHK Trigger: TTTATGATAGCATGCTTCCTGCCGAAGATCAAGAACTGCTTTTCAGCTGGTCAAGTCCACCTGGGAGCCTTTGGAAAGCATTTGGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 90 bp | AACGGAACCGAGTATCCACTTGGAAAAGCAACAATAACATACAATTaGAGTCACATCCCACTCCAAACAACAGAACAAACCCCAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: NGTEYPLGKATITYN*SHIPLQTTEQTPRT Trigger: TGTCCTTGGGGTTTGTTCTGTTGTTTGGAGTGGGATGTGACTTCAATTGTATGTTATTGTTGCTTTTCCAAGTGGATACTCGGTTCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 90 bp | TATTTACTTAAGAATGTAATATATACTTACTTAGCTCAATGCCCCTaGACAATCGCCTTGCTATTTCTGTACCTGCCTTGCTATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YLLKNVIYTYLAQCP*TIALLFLYLPCYVF Trigger: GAAGACATAGCAAGGCAGGTACAGAAATAGCAAGGCGATTGTTCAGGGGCATTGAGCTAAGTAAGTATATATTACATTCTTAAGTAAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS GCA 72 bp | CCTCCAGCTCCAAAGCCAAGCCTGGGTGGGCTCTCCTaGTCGGGGCTCCAGTCCGCAATAGCCCAGGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PPAPKPSLGGLS*SGLQSAIAQGG Trigger: CCCACCCTGGGCTATTGCGGACTGGAGCCCCGAGCAGGAGAGCCCACCCAGGCTTGGCTTTGGAGCTGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | CTGAGAGACAGCTTGATGCATCCCAGCAGGGGTGGGTaGAAGGTGCCCAGCTCTCTGCGCCAGGCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRDSLMHPSRGG*KVPSSLRQAGL Trigger: CAGCCCTGCCTGGCGCAGAGAGCTGGGCACCTTCCACCCACCCCTGCTGGGATGCATCAAGCTGTCTCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | ATTCACCGCTGTCTCCTCCAGCTCCAAAGCCAAGCCTaGGTGGGCTCTCCTGCTCGGGGCTCCAGTCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: IHRCLLQLQSQA*VGSPARGSSPQ Trigger: TTGCGGACTGGAGCCCCGAGCAGGAGAGCCCACCCAGGCTTGGCTTTGGAGCTGGAGGAGACAGCGGTGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 72 bp | GGGCAGCAGCTCCCCCGAGAGCGGGGGAGACATTTCTaGAGCCAAGGTCCCATCAAGGTCTCCCGAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: GQQLPRERGRHF*SQGPIKVSRKT Trigger: CGTCTTTCGGGAGACCTTGATGGGACCTTGGCTTCAGAAATGTCTCCCCCGCTCTCGGGGGAGCTGCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | CACCCTGGACAGGTGTTGGCCCTGCTGCTGGTCTTCTaGGTCCACAGTGGTCCTGTGGCCACAGCACTGATC | + |
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Preference number: 6 (lower is better) Translates to: HPGQVLALLLVF*VHSGPVATALI Trigger: GATCAGTGCTGTGGCCACAGGACCACTGTGGACCCAGAAGACCAGCAGCAGGGCCAACACCTGTCCAGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | GAGGCTGAGCTTGCCTTTCCGGGAGAGGCTACATTGTaGGGCAAGGCAGGCAGGGACCTTCGGCAAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: EAELAFPGEATL*GKAGRDLRQAP Trigger: AGGAGCTTGCCGAAGGTCCCTGCCTGCCTTGCCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 72 bp | GTGGAGGCTGAGCTTGCCTTTCCGGGAGAGGCTACATaGTGGGGCAAGGCAGGCAGGGACCTTCGGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VEAELAFPGEAT*WGKAGRDLRQA Trigger: AGCTTGCCGAAGGTCCCTGCCTGCCTTGCCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | CTCCTGCTCGGGGCTCCAGTCCGCAATAGCCCAGGGTaGGGTCCTGCCTATGGGTACTTTGCAGGTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: LLLGAPVRNSPG*GPAYGYFAGPY Trigger: ATATGGACCTGCAAAGTACCCATAGGCAGGACCCCACCCTGGGCTATTGCGGACTGGAGCCCCGAGCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | AGAGTGTTCAAAGCCCAGTCAGACCAAAGACCCAGCTaGGGCAGCAGCTCCCCCGAGAGCGGGGGAGACATT | + |
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Preference number: 6 (lower is better) Translates to: RVFKAQSDQRPS*GSSSPESGGDI Trigger: AATGTCTCCCCCGCTCTCGGGGGAGCTGCTGCCCCAGCTGGGTCTTTGGTCTGACTGGGCTTTGAACACTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | CATGATGAGGTAGGGTTTCCCACCCTGGACAGGTGTTaGCCCTGCTGCTGGTCTTCTGGGTCCACAGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HDEVGFPTLDRC*PCCWSSGSTVV Trigger: GACCACTGTGGACCCAGAAGACCAGCAGCAGGGCCAACACCTGTCCAGGGTGGGAAACCCTACCTCATCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 72 bp | CACTCAGCAGGCAAGAGCCTCAAGACCAGACACCCCTaGCCGGTGACAGAGCATCGGTTGGGTACCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSAGKSLKTRHP*PVTEHRLGTTA Trigger: TGCTGTGGTACCCAACCGATGCTCTGTCACCGGCAAGGGGTGTCTGGTCTTGAGGCTCTTGCCTGCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 90 bp | TGGGTTCCAGTGGAGGCTGAGCTTGCCTTTCCGGGAGAGGCTACATaGTGGGGCAAGGCAGGCAGGGACCTTCGGCAAGCTCCTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: WVPVEAELAFPGEAT*WGKAGRDLRQAPFL Trigger: TAGAAAAGGAGCTTGCCGAAGGTCCCTGCCTGCCTTGCCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTCCACTGGAACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS GCA 72 bp | GCAGGCAGGGACCTTCGGCAAGCTCCTTTTCTACCCTaGAGTTCAGAGGTTTGTAGCTGGCAGGCTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGRDLRQAPFLP*SSEVCSWQAEW Trigger: CCACTCAGCCTGCCAGCTACAAACCTCTGAACTGCAGGGTAGAAAAGGAGCTTGCCGAAGGTCCCTGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 72 bp | GTGACAGAGCATCGGTTGGGTACCACAGCAGACCTATaGTGCTATTGGACTCAGCTCCATGCCCAGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VTEHRLGTTADL*CYWTQLHAQPH Trigger: GTGGGGCTGGGCATGGAGCTGAGTCCAATAGCATCATAGGTCTGCTGTGGTACCCAACCGATGCTCTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 72 bp | AGGACACAGATGTCAGATGTGGGTTCCAGTGGAGGCTaGGCTTGCCTTTCCGGGAGAGGCTACATTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RTQMSDVGSSGG*ACLSGRGYIVG Trigger: CCCCACAATGTAGCCTCTCCCGGAAAGGCAAGCTCAGCCTCCACTGGAACCCACATCTGACATCTGTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | GCTCCTTTTCTACCCTGCAGTTCAGAGGTTTGTAGCTaGCAGGCTGAGTGGGTGGAGGTTGAGGCAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: APFLPCSSEVCS*QAEWVEVEAAP Trigger: AGGTGCTGCCTCAACCTCCACCCACTCAGCCTGCCAGCTACAAACCTCTGAACTGCAGGGTAGAAAAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CCA 72 bp | GCAGTTCAGAGGTTTGTAGCTGGCAGGCTGAGTGGGTaGAGGTTGAGGCAGCACCTGCAGTGTGAGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: AVQRFVAGRLSG*RLRQHLQCENF Trigger: AAAGTTCTCACACTGCAGGTGCTGCCTCAACCTCCACCCACTCAGCCTGCCAGCTACAAACCTCTGAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 90 bp | CTCCAGTCCGCAATAGCCCAGGGTGGGGTCCTGCCTATGGGTACTTaGCAGGTCCATATTTCAGTATTGAATGTGTCTGGGGTATTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LQSAIAQGGVLPMGT*QVHISVLNVSGVFL Trigger: CAGAAATACCCCAGACACATTCAATACTGAAATATGGACCTGCAAAGTACCCATAGGCAGGACCCCACCCTGGGCTATTGCGGACTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 72 bp | GCTTCCAAATGCTTTCCAAAGGCTCCCAGGTGGACTTaGCCAGCTGAAAAGCAGTTCTTGATCTTCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASKCFPKAPRWT*PAEKQFLIFGR Trigger: CCTGCCGAAGATCAAGAACTGCTTTTCAGCTGGTCAAGTCCACCTGGGAGCCTTTGGAAAGCATTTGGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 72 bp | GCAATAGCCCAGGGTGGGGTCCTGCCTATGGGTACTTaGCAGGTCCATATTTCAGTATTGAATGTGTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AIAQGGVLPMGT*QVHISVLNVSG Trigger: CCCAGACACATTCAATACTGAAATATGGACCTGCAAAGTACCCATAGGCAGGACCCCACCCTGGGCTATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 90 bp | CAACGGAACCGAGTATCCACTTGGAAAAGCAACAATAACATACAATaGAAGTCACATCCCACTCCAAACAACAGAACAAACCCCAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: QRNRVSTWKSNNNIQ*KSHPTPNNRTNPKD Trigger: GTCCTTGGGGTTTGTTCTGTTGTTTGGAGTGGGATGTGACTTCAATTGTATGTTATTGTTGCTTTTCCAAGTGGATACTCGGTTCCGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS TCA 72 bp | AAGAATGTAATATATACTTACTTAGCTCAATGCCCCTaGACAATCGCCTTGCTATTTCTGTACCTGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: KNVIYTYLAQCP*TIALLFLYLPC Trigger: GCAAGGCAGGTACAGAAATAGCAAGGCGATTGTTCAGGGGCATTGAGCTAAGTAAGTATATATTACATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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| CDS CAA 72 bp | CGAGTATCCACTTGGAAAAGCAACAATAACATACAATaGAAGTCACATCCCACTCCAAACAACAGAACAAAC | + |
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Preference number: 6 (lower is better) Translates to: RVSTWKSNNNIQ*KSHPTPNNRTN Trigger: GTTTGTTCTGTTGTTTGGAGTGGGATGTGACTTCAATTGTATGTTATTGTTGCTTTTCCAAGTGGATACTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626215.1 |
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