RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LSG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000041802

Ensembl transcript IDs: ENST00000265245.10, ENST00000427461.1, ENST00000437613.1, ENST00000460584.1, ENST00000461343.1, ENST00000466391.1, ENST00000475763.5, ENST00000480853.1

Found 222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGCTCTaGAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGT +
Preference number: 1 (lower is better)
Translates to: RPLVLTWRLLGAAVL*KSRARSTVLVSWDG
Trigger: ACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCAGAGCACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR TCA 90 bp CAATATCAGGAGAACAGCACTGAGCGGGTGGTGCTAAACCGTTCGTaGGGACTCTGCCCCATAATCCCATCGCCTCCCACCAGGGGGCTT +
Preference number: 1 (lower is better)
Translates to: QYQENSTERVVLNRS*GLCPIIPSPPTRGL
Trigger: AAGCCCCCTGGTGGGAGGCGATGGGATTATGGGGCAGAGTCCTCACGAACGGTTTAGCACCACCCGCTCAGTGCTGTTCTCCTGATATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 90 bp GCCGTGCTCTGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTaGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATC +
Preference number: 1 (lower is better)
Translates to: AVLCKSRARSTVLVS*DGSTGNRQLLLFSI
Trigger: GATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCAGAGCACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 90 bp AGATGGGGGCTAGGTAGTAAATACCGCAGCTTCCCTGTCACCCGGTaGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGT +
Preference number: 1 (lower is better)
Translates to: RWGLGSKYRSFPVTR*LHSTCSLVDVSPRC
Trigger: ACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTGACAGGGAAGCTGCGGTATTTACTACCTAGCCCCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 90 bp GGAGTAGGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTaGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGG +
Preference number: 1 (lower is better)
Translates to: GVGFSGSQMTPFCQS*CFQEALGLDMETVG
Trigger: CCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCCTACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR GCA 90 bp CTTCTTCCATCACGTATAAGAAAGTACAGCAATAAGATAACTTTCTaGAGCTGGTGGCAAGCCCCTCAAATCCCTCACAAATATAGTGGG +
Preference number: 1 (lower is better)
Translates to: LLPSRIRKYSNKITF*SWWQAPQIPHKYSG
Trigger: CCCACTATATTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCTTATACGTGATGGAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR CCA 90 bp CATTTCTTTCACATAACATTCCAAATCCTCACATCTAAACAGGAGTaGGTTTCGAGCATCTACTATCTGGACCACAATATCATTAGGTTG +
Preference number: 1 (lower is better)
Translates to: HFFHITFQILTSKQE*VSSIYYLDHNIIRL
Trigger: CAACCTAATGATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTGAAAGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR CAA 90 bp AGCCGTGCTCTGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTaGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCAT +
Preference number: 2 (lower is better)
Translates to: SRALQEQGPFYSASV*GRFHRQQAASALFH
Trigger: ATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCAGAGCACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR GCA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGTGTTGGGTGCAGCCGTaGTCTGCAAGAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQECWVQP*SARAGP
Trigger: GGGCCCTGCTCTTGCAGAGCACGGCTGCACCCAACA...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR TCA 90 bp CTAGGACACTCAGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCCTCCATGTTGGTGCGTaGGCCACTGTGCCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: LGHSEWGISLSPSSQMCLLHVGA*ATVPGQ
Trigger: CTGGCCGGGCACAGTGGCTCACGCACCAACATGGAG...GAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR GCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCGGTGCAGCCGTGCTCTaGAAGAGCAGGGCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSGAAVL*KSRARS
Trigger: AGAACGGGCCCTGCTCTTGCAGAGCACGGCTGCACC...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CAA 90 bp ATATGGCCAGAGCAGGAGGGAGACAGAGGGGAGGCACCACACACTTaGAAGCAACCAGATGTGATGAGGACTCAATATCAGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: IWPEQEGDRGEAPHT*KQPDVMRTQYQENS
Trigger: GCTGTTCTCCTGATATTGAGTCCTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCCTGCTCTGGCCATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGCCTTTTTGTCAGAGTTaGTGTTTCCAGGAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEPFCQS*CFQEAL
Trigger: AAGGGCCTCCTGGAAACACCAACTCTGACAAAAAGG...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR TCA 90 bp CTAGGACACTCAGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGGAGGCCCTTGGTCTTaGCATGGAGACTGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: LGHSEWGISLSPSSQMCLGGPWS*HGDCWV
Trigger: CACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCC...GAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR TCA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACCCCAAATGTGTCTCGTaGACCATCCCTTGCAAATTT +
Preference number: 2 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYPKCVS*TIPCKF
Trigger: AAATTTGCAAGGGATGGTTCACGAGACACATTTGGG...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR GCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGATTCACTGCAAACTCTaGCTCCCTGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEIHCKL*LPGSSD
Trigger: ATCACTTGAACCAGGGAGGCAGAGTTTGCAGTGAAT...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCACAGTGCTAGTGTCTTaGGACGGTTCCACAGGCAAC +
Preference number: 2 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSTVLVS*DGSTGN
Trigger: GTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGT...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CCA 90 bp CGAGCATCTACTATCTGGACCACAATATCATTAGGTTGCCCGGCTGAAGCAGGAATAACTTTCTGCAGCTaGTGGCAAGCCCCTCAAATC +
Preference number: 2 (lower is better)
Translates to: RASTIWTTISLGCPAEAGITFCS*WQAPQI
Trigger: GATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTAT...TCCTGCTTCAGCCGGGCAACCTAATGATATTGTGGTCCAGATAGTAGATGCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR-3UTR TCA 90 bp CTAGGACACTCAGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCTCTGCACAATGCAGATaGCATTTCTGTTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LGHSEWGISLSPSSQMCLSAQCR*HFCCSP
Trigger: TGGGCTGCAACAGAAATGTCATCTGCATTGTGCAGA...GAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR TCA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGTCTCGGGCTCCCAGATaGCTCCTTTTTGTCAGAGTT +
Preference number: 2 (lower is better)
Translates to: HPEATTNLLPLYGDLLILSRAPR*LLFVRV
Trigger: AACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGA...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CCA 90 bp TTTCACATAACATTCCAAATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCCGGCTGAAGCAGGAATaGCAAGTCCAACTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: FHITFQILTSKQEWVSSIRLKQE*QVQLLP
Trigger: TGGAAGAAGTTGGACTTGCCATTCCTGCTTCAGCCG...GATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR-3UTR GCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAAGCAATCTCCATTCACTaGAAACTCTGCCTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQAISIH*KLCLPG
Trigger: ACCAGGGAGGCAGAGTTTGCAGTGAATGGAGATTGC...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CCA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACCCTTGGTCTTGACATaGAGACTGTTGGGTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSPLVLT*RLLGAA
Trigger: GGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGG...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR TCA 72 bp GAGAACAGCACTGAGCGGGTGGTGCTAAACCGTTCGTaGGGACTCTGCCCCATAATCCCATCGCCTCCCACC +
Preference number: 3 (lower is better)
Translates to: ENSTERVVLNRS*GLCPIIPSPPT
Trigger: GGTGGGAGGCGATGGGATTATGGGGCAGAGTCCTCACGAACGGTTTAGCACCACCCGCTCAGTGCTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 72 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTaGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTC +
Preference number: 3 (lower is better)
Translates to: CKSRARSTVLVS*DGSTGNRQLLL
Trigger: GAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR GCA 72 bp GTCTTGACATGGAGACTGTTGGGTGCAGCCGTGCTCTaGAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCT +
Preference number: 3 (lower is better)
Translates to: VLTWRLLGAAVL*KSRARSTVLVS
Trigger: AGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCAGAGCACGGCTGCACCCAACAGTCTCCATGTCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR TCA 72 bp TTCCTTAGTGGACGTGAGCCCCCGCTGTACACTAACTaGACCCAAGTCCCTTGTTTAGAGTCGGAGGAACCC +
Preference number: 3 (lower is better)
Translates to: FLSGREPPLYTN*TQVPCLESEEP
Trigger: GGGTTCCTCCGACTCTAAACAAGGGACTTGGGTTCAGTTAGTGTACAGCGGGGGCTCACGTCCACTAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 72 bp CTAGGTAGTAAATACCGCAGCTTCCCTGTCACCCGGTaGTTACATTCTACATGTTCCTTAGTGGACGTGAGC +
Preference number: 3 (lower is better)
Translates to: LGSKYRSFPVTR*LHSTCSLVDVS
Trigger: GCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTGACAGGGAAGCTGCGGTATTTACTACCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR-3UTR CAA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCTACAGTGCTAGTGTCTaGGGACGGTTCCACAGGCAA +
Preference number: 3 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSYSASV*GRFHRQ
Trigger: TTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTA...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR TCA 72 bp TACTATCTGGACCACAATATCATTAGGTTGCCCGGCTaGAGCAGGAATGGCAAGTCCAACTTCTTCCATCAC +
Preference number: 3 (lower is better)
Translates to: YYLDHNIIRLPG*SRNGKSNFFHH
Trigger: GTGATGGAAGAAGTTGGACTTGCCATTCCTGCTTCAGCCGGGCAACCTAATGATATTGTGGTCCAGATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR-3UTR CAA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCCCAGATGACTCCTTTTaGTCAGAGTTGGTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSPDDSF*SELVFP
Trigger: TGGAAACACCAACTCTGACAAAAAGGAGTCATCTGG...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CCA 72 bp AGAAAGTACAGCAATAAGATAACTTTCTGCAGCTGGTaGCAAGCCCCTCAAATCCCTCACAAATATAGTGGG +
Preference number: 3 (lower is better)
Translates to: RKYSNKITFCSW*QAPQIPHKYSG
Trigger: CCCACTATATTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR GCA 72 bp TCACGTATAAGAAAGTACAGCAATAAGATAACTTTCTaGAGCTGGTGGCAAGCCCCTCAAATCCCTCACAAA +
Preference number: 3 (lower is better)
Translates to: SRIRKYSNKITF*SWWQAPQIPHK
Trigger: TTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCTTATACGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR CCA 72 bp CACATAACATTCCAAATCCTCACATCTAAACAGGAGTaGGTTTCGAGCATCTACTATCTGGACCACAATATC +
Preference number: 3 (lower is better)
Translates to: HITFQILTSKQE*VSSIYYLDHNI
Trigger: GATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
3UTR CCA 72 bp ATAAGAAAGTACAGCAATAAGATAACTTTCTGCAGCTaGTGGCAAGCCCCTCAAATCCCTCACAAATATAGT +
Preference number: 3 (lower is better)
Translates to: IRKYSNKITFCS*WQAPQIPHKYS
Trigger: ACTATATTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR GCA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCGGTGCAGCCGTGCTCTaGAAGAGCAGGGCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGGAAVL*KSRARS
Trigger: AGAACGGGCCCTGCTCTTGCAGAGCACGGCTGCACC...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCTGTTGGGTGCAGCCGTaGTCTGCAAGAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICCWVQP*SARAGP
Trigger: GGGCCCTGCTCTTGCAGAGCACGGCTGCACCCAACA...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACAACCAGGAGTCAGTGTaGCGATGGCTTCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYNQESV*RWLRLR
Trigger: GCGGAGCCGAAGCCATCGTCACACTGACTCCTGGTT...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CAA 72 bp CTGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTaGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LQEQGPFYSASV*GRFHRQQAASA
Trigger: AGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCGGAGGCCCTTGGTCTTaGCATGGAGACTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICGGPWS*HGDCWV
Trigger: CACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCC...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCTCTAGCCGGACAAGCTaGCGTCTCCATTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGSSRTS*RLHSRK
Trigger: CTTTCTAGAATGGAGACGTCAGCTTGTCCGGCTAGA...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGTCTCGGGCTCCCAGATaGCTCCTTTTTGTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVSRAPR*LLFVRV
Trigger: AACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGA...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGTGGTCTGGCTGTCCATaGGCTGTCATGAATCCTCGC +
Preference number: 4 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEWSGCP*AVMNPR
Trigger: GCGAGGATTCATGACAGCGCATGGACAGCCAGACCA...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CAA 72 bp TTTGTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTaGACATGGAGACTGTTGGGTGCAGCCGTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FVRVGVSRRPLV*TWRLLGAAVLC
Trigger: GCAGAGCACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp CGAGCATCTACTATCTGGACCACAATATCATTAGGTTGCCCGGCTGAAGCAGGAAACCAGGAGTCAGTGTaGCGATGGCTTCGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RASTIWTTISLGCPAEAGNQESV*RWLRLR
Trigger: GCGGAGCCGAAGCCATCGTCACACTGACTCCTGGTT...TCCTGCTTCAGCCGGGCAACCTAATGATATTGTGGTCCAGATAGTAGATGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR TCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACTCCATGTTGGTGCGTaGGCCACTGTGCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARALHVGA*ATVPGQ
Trigger: CTGGCCGGGCACAGTGGCTCACGCACCAACATGGAG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCCTTTTTCGAAGTACATaGCCCAGGCACTCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICLFRST*PRHSAA
Trigger: AGCAGCGGAGTGCCTGGGCCATGTACTTCGAAAAAG...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACTCTCAGAGCTCGCAGTaGATGCAGTCACTACACCAC +
Preference number: 4 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYSQSSQ*MQSLHH
Trigger: GTGGTGTAGTGACTGCATCCACTGCGAGCTCTGAGA...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGTTCCCTGTCACCCGGTaGTTACATTCTACATGTTCC +
Preference number: 4 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVFPVTR*LHSTCS
Trigger: GGAACATGTAGAATGTAACCACCGGGTGACAGGGAA...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCTGTTCAGTCACTGACTaGAGATTAAGACGACCCCAA +
Preference number: 4 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGCSVTD*RLRRPQ
Trigger: TTGGGGTCGTCTTAATCTTCAGTCAGTGACTGAACA...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGGTCTTCCTCCTCCTCTaGACAGTCCTCATACTCACT +
Preference number: 4 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEVFLLL*TVLILT
Trigger: AGTGAGTATGAGGACTGTCCAGAGGAGGAGGAAGAC...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGAGATCGAGGCTGGTCTaGCTGTCCATGCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQERSRLV*LSMRCH
Trigger: ATGACAGCGCATGGACAGCCAGACCAGCCTCGATCT...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
3UTR CAA 72 bp AGGAGTAGGATTCTCGGGCTCCCAGATGACTCCTTTTaGTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RSRILGLPDDSF*SELVFPGGPWS
Trigger: AGACCAAGGGCCTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCCTACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCAACCACTAATGGGACCGTCTTCTTCTaGGCACGTCTGCCAGTCGTC +
Preference number: 4 (lower is better)
Translates to: AKERPQSSHSSHPEATTNGTVFF*ARLPVV
Trigger: GACGACTGGCAGACGTGCTCAGAAGAAGACGGTCCC...ATTAGTGGTTGCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTTTGGGAGGATTCCGCTaGAAGTCATTTCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGLGGFR*KSFLPW
Trigger: CCAAGGCAGAAATGACTTGCAGCGGAATCCTCCCAA...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGACAGTGCTAGTGTCTTaGGACGGTTCCACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQETVLVS*DGSTGN
Trigger: GTTGCCTGTGGAACCGTCCCAAGACACTAGCACTGT...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCTCTGTTCAGTCACTaGCTGAAGATTAAGACGACC +
Preference number: 4 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGALFSH*LKIKTT
Trigger: GGTCGTCTTAATCTTCAGTCAGTGACTGAACAGAGC...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCTCTATCATCTCTGTTTaGCTCTTCCTCAGAGTCACC +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICSIISV*LFLRVT
Trigger: GGTGACTCTGAGGAAGAGGCAAACAGAGATGATAGA...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp CTAGGACACTCAGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCCCTTCCAGTCCTGGCTaGAGTCCTCTTCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LGHSEWGISLSPSSQMCLPSSPG*SPLPWD
Trigger: GTCCCAAGGAAGAGGACTGCAGCCAGGACTGGAAGG...GAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGTCTGGGGTAGTATTTTaGTTCCAGTTTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGRQRGGTTHFEATRCDESGVVF*FQFGLL
Trigger: GAGGAGACCAAACTGGAACCAAAATACTACCCCAGA...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCACATCTAAACAGGAGTaGGTTTCGAGCATCTACTAT +
Preference number: 4 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGTSKQE*VSSIYY
Trigger: ATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGT...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTAGGAGAATCCCTAGCTaGGAGATGTTCGGATTCACT +
Preference number: 4 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGRRIPS*EMFGFT
Trigger: AGTGAATCCGAACATCTCCCAGCTAGGGATTCTCCT...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCTCTCATCTGATCAATTaGGAGGATTCCGCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICSHLIN*EDSAAS
Trigger: ACTTGCAGCGGAATCCTCCCAATTGATCAGATGAGA...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGAATCATAGCCATCATTaGGTTCACTTGTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: GGRQRGGTTHFEATRCDENHSHH*VHLCAT
Trigger: GGTTGCACACAAGTGAACTCAATGATGGCTATGATT...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCTACAAACTCTGTTCCTaGAAGTTCTGCAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICYKLCS*KFCSSK
Trigger: CTTGCTACTGCAGAACTTGCAGGAACAGAGTTTGTA...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTAGCAGTCAGCAAGTCTaGCTTGTTGATCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGSSQQV*LVDQND
Trigger: GTCATTCTGATCAACAAGGCAGACTTGCTGACTGCT...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCAAGAGCTCGCAGTGGATaGAGTCACTACACCACTCCC +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARARARSG*SHYTTP
Trigger: GGGAGTGGTGTAGTGACTGCATCCACTGCGAGCTCT...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAACTCTCCTCCGGCCCATaGCAACACGACCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQLSSGP*QHDRWT
Trigger: CGTCCAGCGGTCGTGTTGCCATGGGCCGGAGGAGAG...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCTGGAATGTCCAAACTTaGTTGTGTTGCTTTGTCTAT +
Preference number: 4 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGWNVQT*LCCFVY
Trigger: ATAGACAAAGCAACACAACCAAGTTTGGACATTCCA...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGCGCGCAGATCGAGGCTaGTCTGGCTGTCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: HPEATTNLLPLYGDLLILRADRG*SGCPCA
Trigger: AGCGCATGGACAGCCAGACCAGCCTCGATCTGCGCG...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp CGAGCATCTACTATCTGGACCACAATATCATTAGGTTGCCCGGCTGAAGCAGGAGCTCTGTTCAGTCACTaGCTGAAGATTAAGACGACC +
Preference number: 4 (lower is better)
Translates to: RASTIWTTISLGCPAEAGALFSH*LKIKTT
Trigger: GGTCGTCTTAATCTTCAGTCAGTGACTGAACAGAGC...TCCTGCTTCAGCCGGGCAACCTAATGATATTGTGGTCCAGATAGTAGATGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR TCA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGGATGGTGTTGATTGTTaGACTCTTACCAACATTAGG +
Preference number: 4 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEDGVDC*TLTNIR
Trigger: CCTAATGTTGGTAAGAGTTCAACAATCAACACCATC...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp CTAGGGAGGCCTCAGGAAACTTACAATCATGTTAGAAGGCGAAGGAGAAGCAGGAGTCCGACCGTAAGTTaGCCATCTTTCACCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LGRPQETYNHVRRRRRSRSPTVS*PSFTFL
Trigger: GAGAAAGGTGAAAGATGGGCAACTTACGGTCGGACT...CCTGCTTCTCCTTCGCCTTCTAACATGATTGTAAGTTTCCTGAGGCCTCCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGCAAATTTCGTTCAAATaGAGTCAATATCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVQISFK*SQYQLL
Trigger: CAGAAGCTGATATTGACTCCATTTGAACGAAATTTG...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CTAGGACACTCAGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCTGCAGTCCTCTTCCTTaGGACCGTCTTCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGHSEWGISLSPSSQMCLCSPLP*DRLLLS
Trigger: GCTCAGAAGAAGACGGTCCCAAGGAAGAGGACTGCA...GAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACTTTCCTTCCAGTCCTaGCTGCAGTCCTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARALSFQS*LQSSSL
Trigger: CAAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACTTCCAGGAGGAGGATaGCAGTACAGCAGCTTACCA +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARALPGGG*QYSSLP
Trigger: TGGTAAGCTGCTGTACTGCCATCCTCCTCCTGGAAG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCGTCCATGCGCTGTCATaGATCCTCGCATGTATCCAT +
Preference number: 4 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSVHALS*ILACIH
Trigger: ATGGATACATGCGAGGATTCATGACAGCGCATGGAC...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp AAGCAGGAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATCAGCACTTCTCTCAATaGCTCTCCAGAGCTGGCGCC +
Preference number: 4 (lower is better)
Translates to: KQEWQVQLLPSRIRKYSNQHFSQ*LSRAGA
Trigger: GGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGCTG...ATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTCCTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR GCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAAGCCCAGGCACTCCGCTaGTCAGCAGTCAGCAAGTCT +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQAQALR*SAVSKS
Trigger: AGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGC...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACCGAGCCTCAGAATCTaGAGTAGAGCTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAPSLRI*SRAFLP
Trigger: TGGAAGGAAAGCTCTACTGCAGATTCTGAGGCTCGG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCTCTGTGGGGTTTTCCTaGTCCGAGCCTCAGAATCTG +
Preference number: 4 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSSVGFS*SEPQNL
Trigger: CAGATTCTGAGGCTCGGAGCAGGAAAACCCCACAGA...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCCAGTTCTTCCGATGTTaGAGGTCGGTGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSQFFRC*RSVGIF
Trigger: GAAGATCCCCACCGACCTCCAACATCGGAAGAACTG...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCCAACATGAGACTCGGTaGGGACACAGATCCAAACCA +
Preference number: 4 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSQHETR*GHRSKP
Trigger: TGGTTTGGATCTGTGTCCTCACCGAGTCTCATGTTG...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp AAGCAGGAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATATTAGGTTGCCCGGCTaGAGCAGGAATGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KQEWQVQLLPSRIRKYSNIRLPG*SRNGKS
Trigger: GGACTTGCCATTCCTGCTTCAGCCGGGCAACCTAAT...ATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTCCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR GCA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCGCAATCTCCATTCACTaGAAACTCTGCCTCCCTGGT +
Preference number: 4 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSAISIH*KLCLPG
Trigger: ACCAGGGAGGCAGAGTTTGCAGTGAATGGAGATTGC...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp TCTACTATCTGGACCACAATATCATTAGGTTGCCCGGCTGAAGCAGGAATGGCATCTGGGGTAGTATTTTaGTTCCAGTTTGGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: STIWTTISLGCPAEAGMASGVVF*FQFGLL
Trigger: GAGGAGACCAAACTGGAACCAAAATACTACCCCAGA...TGCCATTCCTGCTTCAGCCGGGCAACCTAATGATATTGTGGTCCAGATAGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACAGCCTGGTCGAAACTaGAATGTCCAAACTTGGTTG +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAQPGRN*NVQTWL
Trigger: CAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCCCTTTTTGTCAGAGTTaGTGTTTCCAGGAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSPFCQS*CFQEAL
Trigger: AAGGGCCTCCTGGAAACACCAACTCTGACAAAAAGG...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GCTGAAGCAGGAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCGGCTGAAGCAGGAATaGCAAGTCCAACTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: AEAGMASPTSSITYKKVQRLKQE*QVQLLP
Trigger: TGGAAGAAGTTGGACTTGCCATTCCTGCTTCAGCCG...CTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTCCTGCTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR TCA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCACAGCAGCTTACCACTaGCATAGTCCTTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSTAAYH*HSPSGC
Trigger: ACATCCTGAAGGACTATGTCAGTGGTAAGCTGCTGT...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACCCAAATGTGTCTCGTaGACCATCCCTTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAPKCVS*TIPCKF
Trigger: AAATTTGCAAGGGATGGTTCACGAGACACATTTGGG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAATCTTCTGAGCACGTCTaGCAGTCGTCTTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQSSEHV*QSSSSS
Trigger: GGAGGAGGAAGACGACTGGCAGACGTGCTCAGAAGA...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCAATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAMTLQS*RQKSKF
Trigger: AAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCAT...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCTGGGAAATTTCAGCCTaGTCGAAACTGGAATGTCCA +
Preference number: 4 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSWEISA*SKLECP
Trigger: TGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCA...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGTGTCTTGGAATATTCTaGCAAACTAGTGATACAGGA +
Preference number: 4 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQECLGIF*QTSDTG
Trigger: TCCTGTATCACTAGTTTGCCAGAATATTCCAAGACA...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAACCCTTGGTCTTGACATaGAGACTGTTGGGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQPLVLT*RLLGAA
Trigger: GGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGG...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp CTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATCTGGACCACAATATCACAATATCATTAGGTTaGCCGGCTGAAGCAGGAATG +
Preference number: 4 (lower is better)
Translates to: LTSKQEWVSSIYYLDHNITISLG*PAEAGM
Trigger: CATTCCTGCTTCAGCCGGGCAACCTAATGATATTGT...GATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCAAGCTTCTTAATTCTCTaGCTCTCCTCGAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARASFLIL*LSSKDS
Trigger: ACTGTCTTTCGAGGAGAGCCAGAGAATTAAGAAGCT...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATCTGGACCACAATATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTT +
Preference number: 4 (lower is better)
Translates to: ILTSKQEWVSSIYYLDHNMTLQS*RQKSKF
Trigger: AAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCAT...ATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACGAGCATCTACTATCTaGACCACAATATCACTTCTC +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARARASTI*TTISLL
Trigger: GAGAAGTGATATTGTGGTCCAGATAGTAGATGCTCG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGTCTACTTCCTCTATATaGAGATTTGCTTATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQESTSSI*RFAYSG
Trigger: TCCAGAATAAGCAAATCTCCATATAGAGGAAGTAGA...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GCTGAAGCAGGAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGAATCATAGCCATCATTaGGTTCACTTGTGTGCAACC +
Preference number: 4 (lower is better)
Translates to: AEAGMASPTSSITYKKVQNHSHH*VHLCAT
Trigger: GGTTGCACACAAGTGAACTCAATGATGGCTATGATT...CTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTCCTGCTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR GCA 90 bp CTAGGGAGGCCTCAGGAAACTTACAATCATGTTAGAAGGCGAAGGAGAAGCAGGGGACATTTTTATCACTaGAAAAGAAAGACCTCAATC +
Preference number: 4 (lower is better)
Translates to: LGRPQETYNHVRRRRRSRGHFYH*KRKTSI
Trigger: GATTGAGGTCTTTCTTTTGCAGTGATAAAAATGTCC...CCTGCTTCTCCTTCGCCTTCTAACATGATTGTAAGTTTCCTGAGGCCTCCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATCTGGACCACAATATCAGCTTCTTAATTCTCTaGCTCTCCTCGAAAGACAGT +
Preference number: 4 (lower is better)
Translates to: LTSKQEWVSSIYYLDHNISFLIL*LSSKDS
Trigger: ACTGTCTTTCGAGGAGAGCCAGAGAATTAAGAAGCT...GATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGTGTTCGGATTCACTGTaGGAAATTTCAGCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: HPEATTNLLPLYGDLLILCSDSL*EISAWS
Trigger: CGACCAGGCTGAAATTTCCCACAGTGAATCCGAACA...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp GAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATAAGATATCTAGCCGGACAAGCTaGCGTCTCCATTCTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EWQVQLLPSRIRKYSNKISSRTS*RLHSRK
Trigger: CTTTCTAGAATGGAGACGTCAGCTTGTCCGGCTAGA...TATCTTATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR TCA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCAGGCTCCGGCCAAAGCTaGCCAGAAAATAACCTTCAC +
Preference number: 4 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSGSGQS*PENNLH
Trigger: GTGAAGGTTATTTTCTGGTCAGCTTTGGCCGGAGCC...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAATCTGCACAATGCAGATaGCATTTCTGTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQSAQCR*HFCCSP
Trigger: TGGGCTGCAACAGAAATGTCATCTGCATTGTGCAGA...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR TCA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAACCGCTGTACACTAACTaGACCCAAGTCCCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQPLYTN*TQVPCL
Trigger: TAAACAAGGGACTTGGGTTCAGTTAGTGTACAGCGG...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp GCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCAACCACTAATCAAACTTGGTTGTGTTaGTTTGTCTATCATCTCTGT +
Preference number: 4 (lower is better)
Translates to: AKERPQSSHSSHPEATTNQTWLC*FVYHLC
Trigger: ACAGAGATGATAGACAAAGCAACACAACCAAGTTTG...ATTAGTGGTTGCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCATTGTTTGAGTTCTTCTaGGGTAGTATTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TIMLEGEGEAGTSYMARALFEFF*GSILVP
Trigger: TGGAACCAAAATACTACCCCAGAAGAACTCAAACAA...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp ATAACATTCCAAATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATAATAAGATAACTTTCTaGAGCTGGTGGCAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: ITFQILTSKQEWVSSIYYNKITF*SWWQAP
Trigger: AGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATT...ATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp AGAATGGGGAATTTCTCTTTCACCTTCGTCCCAAATGTGTCTCGTGAACCATCCTGTTTGTTTTCTTCATaGAGCTTCTTAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: RMGNFSFTFVPNVSREPSCLFSS*SFLILW
Trigger: CCAGAGAATTAAGAAGCTCCATGAAGAAAACAAACA...GGATGGTTCACGAGACACATTTGGGACGAAGGTGAAAGAGAAATTCCCCATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACAGCCTGGACTCCTTTaGTCAAAGCCCTCACATTCT +
Preference number: 4 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSQPGLL*SKPSHS
Trigger: AGAATGTGAGGGCTTTGACCAAAGGAGTCCAGGCTG...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGCTAGGACACTCAGAATaGGGAATTTCTCTTTCACCT +
Preference number: 4 (lower is better)
Translates to: HPEATTNLLPLYGDLLILLGHSE*GISLSP
Trigger: AGGTGAAAGAGAAATTCCCCATTCTGAGTGTCCTAG...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR GCA 90 bp CATTTCTTTCACATAACATTCCAAATCCTCACATCTAAACAGGAGTGGGTTTCGTACAAACTCTGTTCCTaGAAGTTCTGCAGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HFFHITFQILTSKQEWVSYKLCS*KFCSSK
Trigger: CTTGCTACTGCAGAACTTGCAGGAACAGAGTTTGTA...CGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTGAAAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp ATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATCTGGACCACAATCAAATTTCGTTCAAATaGAGTCAATATCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILTSKQEWVSSIYYLDHNQISFK*SQYQLL
Trigger: CAGAAGCTGATATTGACTCCATTTGAACGAAATTTG...ATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCAGGTAGACACAAAAGATaGCATCACCAAGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSGRHKR*HHQART
Trigger: TGTCCTGGCTTGGTGATGCCATCTTTTGTGTCTACC...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp CAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATAAGATAACTTTCATAACTTTCTGCAGCTaGTGGCAAGCCCCTCAAATC +
Preference number: 4 (lower is better)
Translates to: QVQLLPSRIRKYSNKITFITFCS*WQAPQI
Trigger: GATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTAT...GAAAGTTATCTTATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR GCA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCAATTCACTGCAAACTCTaGCTCCCTGGTTCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSIHCKL*LPGSSD
Trigger: ATCACTTGAACCAGGGAGGCAGAGTTTGCAGTGAAT...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CCA 90 bp ATAACATTCCAAATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATACATCTAAACAGGAGTaGGTTTCGAGCATCTACTAT +
Preference number: 4 (lower is better)
Translates to: ITFQILTSKQEWVSSIYYTSKQE*VSSIYY
Trigger: ATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGT...ATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp ATAACATTCCAAATCCTCACATCTAAACAGGAGTGGGTTTCGAGCATCTACTATTTGTTTGAGTTCTTCTaGGGTAGTATTTTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: ITFQILTSKQEWVSSIYYLFEFF*GSILVP
Trigger: TGGAACCAAAATACTACCCCAGAAGAACTCAAACAA...ATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CCA 90 bp TGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATAAGATAACTTGTTTGTTTTCTTCATaGAGCTTCTTAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: WQVQLLPSRIRKYSNKITCLFSS*SFLILW
Trigger: CCAGAGAATTAAGAAGCTCCATGAAGAAAACAAACA...AGTTATCTTATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS CCA 90 bp CTCAGGCGGCCGGGGCTCTCCTCCGGCCCATGGCAACACGACCGCTaGACGAAGCTTCCCGGCTCGGCGCGTGCAGTTTCCGGGATTCAC +
Preference number: 5 (lower is better)
Translates to: LRRPGLSSGPWQHDR*TKLPGSARAVSGIH
Trigger: GTGAATCCCGGAAACTGCACGCGCCGAGCCGGGAAGCTTCGTCCAGCGGTCGTGTTGCCATGGGCCGGAGGAGAGCCCCGGCCGCCTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS CCA 90 bp CCGAATTTTGCAGCACTCAGGCGGCCGGGGCTCTCCTCCGGCCCATaGCAACACGACCGCTGGACGAAGCTTCCCGGCTCGGCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: PNFAALRRPGLSSGP*QHDRWTKLPGSARA
Trigger: TGCACGCGCCGAGCCGGGAAGCTTCGTCCAGCGGTCGTGTTGCCATGGGCCGGAGGAGAGCCCCGGCCGCCTGAGTGCTGCAAAATTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS-3UTR CAA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGGAAGCACAGCAGCTTTaGCTTCTAGGGAGGCCTCAG +
Preference number: 5 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVEAQQL*LLGRPQ
Trigger: CTGAGGCCTCCCTAGAAGCAAAAGCTGCTGTGCTTC...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 90 bp TGGCTGCAGTCCTCTTCCTTGGGACCGTCTTCTTCTGAGCACGTCTaGCAGTCGTCTTCCTCCTCCTCTGGACAGTCCTCATACTCACTG +
Preference number: 5 (lower is better)
Translates to: WLQSSSLGPSSSEHV*QSSSSSSGQSSYSL
Trigger: CAGTGAGTATGAGGACTGTCCAGAGGAGGAGGAAGACGACTGGCAGACGTGCTCAGAAGAAGACGGTCCCAAGGAAGAGGACTGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 90 bp CTGCTCCGAGCCTCAGAATCTGCAGTAGAGCTTTCCTTCCAGTCCTaGCTGCAGTCCTCTTCCTTGGGACCGTCTTCTTCTGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: LLRASESAVELSFQS*LQSSSLGPSSSEHV
Trigger: GACGTGCTCAGAAGAAGACGGTCCCAAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAGCTCTACTGCAGATTCTGAGGCTCGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 90 bp ATCCCCTTGTTCCCAGCCTTCCCTCACTGCCCCATCTACAGACAGTaGTTTCCATCGCATCTTCCACACTGGGTGAGGCTGATCGGATGG +
Preference number: 5 (lower is better)
Translates to: IPLFPAFPHCPIYRQ*FPSHLPHWVRLIGW
Trigger: CCATCCGATCAGCCTCACCCAGTGTGGAAGATGCGATGGAAACCACTGTCTGTAGATGGGGCAGTGAGGGAAGGCTGGGAACAAGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466391.1
CDS-3UTR CAA 90 bp TGCAAGAGCAGGGCCCGTTCTACAGTGCTAGTGTCTTGGGACGGTTCCACAGGCCTCTCATCTGATCAATaGGGAGGATTCCGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: CKSRARSTVLVSWDGSTGLSSDQ*GGFRCK
Trigger: CTTGCAGCGGAATCCTCCCAATTGATCAGATGAGAG...GCCTGTGGAACCGTCCCAAGACACTAGCACTGTAGAACGGGCCCTGCTCTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACAGGAGGCCCTTGGTCTaGACATGGAGACTGTTGGGT +
Preference number: 5 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYRRPLV*TWRLLG
Trigger: ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCT...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 90 bp TATCTGCCTCTTCTGTGGGGTTTTCCTGCTCCGAGCCTCAGAATCTaGAGTAGAGCTTTCCTTCCAGTCCTGGCTGCAGTCCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: YLPLLWGFPAPSLRI*SRAFLPVLAAVLFL
Trigger: AAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAGCTCTACTGCAGATTCTGAGGCTCGGAGCAGGAAAACCCCACAGAAGAGGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 90 bp ACTGACATAGTCCTTCAGGATGTAGCGCGCAGATCGAGGCTGGTCTaGCTGTCCATGCGCTGTCATGAATCCTCGCATGTATCCATAAGC +
Preference number: 5 (lower is better)
Translates to: TDIVLQDVARRSRLV*LSMRCHESSHVSIS
Trigger: GCTTATGGATACATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTGCGCGCTACATCCTGAAGGACTATGTCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000460584.1
CDS-3UTR CAA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTCTGAACCCAAGTCCCTaGTTTAGAGTCGGAGGAACC +
Preference number: 5 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGLNPSP*FRVGGT
Trigger: GGTTCCTCCGACTCTAAACAAGGGACTTGGGTTCAG...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCGAGGCACCACACACTTaGAAGCAACCAGATGTGATG +
Preference number: 5 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICEAPHT*KQPDVM
Trigger: CATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTC...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp GGACTCCCTCCTCCCCATGGCATACAAATCGTGCCTCAAAGAACATaGCACTTCATTCCGCGTGTGACAAACACTCTCTCCTCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: GLPPPHGIQIVPQRT*HFIPRVTNTLSSPK
Trigger: CTTTGGAGAGGAGAGAGTGTTTGTCACACGCGGAATGAAGTGCCATGTTCTTTGAGGCACGATTTGTATGCCATGGGGAGGAGGGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS CCA 90 bp GCTTGTCAGGGAATCCATTCTCTTGAACGGACTCCCTCCTCCCCATaGCATACAAATCGTGCCTCAAAGAACATGGCACTTCATTCCGCG +
Preference number: 5 (lower is better)
Translates to: ACQGIHSLERTPSSP*HTNRASKNMALHSA
Trigger: CGCGGAATGAAGTGCCATGTTCTTTGAGGCACGATTTGTATGCCATGGGGAGGAGGGAGTCCGTTCAAGAGAATGGATTCCCTGACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS-3UTR CAA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGCTTGGTTGTGTTGCTTaGTCTATCATCTCTGTTTGC +
Preference number: 5 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVLGCVA*SIISVC
Trigger: GCAAACAGAGATGATAGACAAAGCAACACAACCAAG...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 90 bp GAAGTACATGGCCCAGGCACTCCGCTGCTCAGCAGTCAGCAAGTCTaGCTTGTTGATCAGAATGACGTTCTCCTTATTGGCATCCATTTC +
Preference number: 5 (lower is better)
Translates to: EVHGPGTPLLSSQQV*LVDQNDVLLIGIHF
Trigger: GAAATGGATGCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCATGTACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 90 bp GATGCTACAGAAAATTTCATCCCCTTGTTCCCAGCCTTCCCTCACTaGCCCATCTACAGACAGTGGTTTCCATCGCATCTTCCACACTGG +
Preference number: 5 (lower is better)
Translates to: DATENFIPLFPAFPH*PIYRQWFPSHLPHW
Trigger: CCAGTGTGGAAGATGCGATGGAAACCACTGTCTGTAGATGGGGCAGTGAGGGAAGGCTGGGAACAAGGGGATGAAATTTTCTGTAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466391.1
CDS-3UTR CAA 90 bp GTGTCTTGGGACGGTTCCACAGGCAACAGGCAGCTTCTGCTCTTTTCCATCTGCTCCAGTAACTCCTGCTaGGATACCAGATGGCTAAAA +
Preference number: 5 (lower is better)
Translates to: VSWDGSTGNRQLLLFSICSSNSC*DTRWLK
Trigger: TTTTAGCCATCTGGTATCCAAGCAGGAGTTACTGGA...GCAGATGGAAAAGAGCAGAAGCTGCCTGTTGCCTGTGGAACCGTCCCAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACGACACAGATACTTTCTaGTTGCCCATGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYDTDTF*LPMMVL
Trigger: CAACACCATCATGGGCAACAAGAAAGTATCTGTGTC...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACCAAGTCATTTCTGCCTaGGTAGACACAAAAGATGGC +
Preference number: 5 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYQVISA*VDTKDG
Trigger: GCCATCTTTTGTGTCTACCAAGGCAGAAATGACTTG...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 90 bp ACCTTCACATCTTCTTTTTCGAAGTACATGGCCCAGGCACTCCGCTaGTCAGCAGTCAGCAAGTCTGCCTTGTTGATCAGAATGACGTTC +
Preference number: 5 (lower is better)
Translates to: TFTSSFSKYMAQALR*SAVSKSALLIRMTF
Trigger: GAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCATGTACTTCGAAAAAGAAGATGTGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGAGCAAGTCTGCCTTGTaGATCAGAATGACGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQESKSAL*IRMTFS
Trigger: GGAGAACGTCATTCTGATCAACAAGGCAGACTTGCT...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGCCAAACTTGGTTGTGTaGCTTTGTCTATCATCTCTG +
Preference number: 5 (lower is better)
Translates to: GGRQRGGTTHFEATRCDEPNLVV*LCLSSL
Trigger: CAGAGATGATAGACAAAGCAACACAACCAAGTTTGG...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTGCAGCCGTGAATGTCCAAACTTGGTaGTGTTGCTTTGTCTATCAT +
Preference number: 5 (lower is better)
Translates to: GVSRRPLVLTWRLLGAAVNVQTW*CCFVYH
Trigger: ATGATAGACAAAGCAACACAACCAAGTTTGGACATT...CACGGCTGCACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CACCCGGTGGTTACATTCTACATGTTCCTTAGTGGACGTGAGCCCCCGCTGTACCTGGAATGTCCAAACTaGGTTGTGTTGCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: HPVVTFYMFLSGREPPLYLECPN*VVLLCL
Trigger: TAGACAAAGCAACACAACCAAGTTTGGACATTCCAG...GTACAGCGGGGGCTCACGTCCACTAAGGAACATGTAGAATGTAACCACCGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp GGGGACTACAGGTGTCCAGCACTTCTCTCAATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTTCGTTCAAATGGAGTCAATATCAGC +
Preference number: 5 (lower is better)
Translates to: GDYRCPALLSMTLQS*RQKSKFRSNGVNIS
Trigger: GCTGATATTGACTCCATTTGAACGAAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGCTGGACACCTGTAGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CAA 90 bp GGAGGGAGACAGAGGGGAGGCACCACACACTTTGAAGCAACCAGATGTGATGAGACAGATACTTTCTTGTaGCCCATGATGGTGTTGATT +
Preference number: 5 (lower is better)
Translates to: GGRQRGGTTHFEATRCDETDTFL*PMMVLI
Trigger: AATCAACACCATCATGGGCAACAAGAAAGTATCTGT...CTCATCACATCTGGTTGCTTCAAAGTGTGTGGTGCCTCCCCTCTGTCTCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCAGAGTCTGAAAGTGCTTaGTGTGACCAGGTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAESESA*CDQVWQ
Trigger: CTGCCACACCTGGTCACACAAAGCACTTTCAGACTC...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCAACCACTAATACAGTTCTTCCGATGTaGGAGGTCGGTGGGGATCTT +
Preference number: 5 (lower is better)
Translates to: AKERPQSSHSSHPEATTNTVLPM*EVGGDL
Trigger: AAGATCCCCACCGACCTCCAACATCGGAAGAACTGT...ATTAGTGGTTGCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCAACCACTAATACAGCCTGGACTCCTTaGGTCAAAGCCCTCACATTC +
Preference number: 5 (lower is better)
Translates to: AKERPQSSHSSHPEATTNTAWTP*VKALTF
Trigger: GAATGTGAGGGCTTTGACCAAAGGAGTCCAGGCTGT...ATTAGTGGTTGCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 90 bp GGCAGACACAGATACTTTCTTGTTGCCCATGATGGTGTTGATTGTTaGACTCTTACCAACATTAGGGTAGCCCACCAGTCCGACCGTAAG +
Preference number: 5 (lower is better)
Translates to: GRHRYFLVAHDGVDC*TLTNIRVAHQSDRK
Trigger: CTTACGGTCGGACTGGTGGGCTACCCTAATGTTGGTAAGAGTTCAACAATCAACACCATCATGGGCAACAAGAAAGTATCTGTGTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000461343.1
CDS TCA 90 bp TTGGAATATTCTGGCAAACGTAGCTTGTCAGGGAATCCATTCTCTTaGACGGACTCCCTCCTCCCCATGGCATACAAATCGTGCCTCAAA +
Preference number: 5 (lower is better)
Translates to: LEYSGKRSLSGNPFS*TDSLLPMAYKSCLK
Trigger: TTTGAGGCACGATTTGTATGCCATGGGGAGGAGGGAGTCCGTTCAAGAGAATGGATTCCCTGACAAGCTACGTTTGCCAGAATATTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS CCA 90 bp GAATCCTCGCATGTATCCATAAGCTGTCAACAGTTCTTCCGATGTTaGAGGTCGGTGGGGATCTTCATCCTCTCTAGGCGTTATGATGTT +
Preference number: 5 (lower is better)
Translates to: ESSHVSISCQQFFRC*RSVGIFILSRRYDV
Trigger: AACATCATAACGCCTAGAGAGGATGAAGATCCCCACCGACCTCCAACATCGGAAGAACTGTTGACAGCTTATGGATACATGCGAGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000460584.1
CDS-3UTR CAA 90 bp TTTTATCACTGCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCTACAGTGCTAGTGTCTaGGGACGGTTCCACAGGCAA +
Preference number: 5 (lower is better)
Translates to: FYHCKRKTSIFPFLPSRSYSASV*GRFHRQ
Trigger: TTGCCTGTGGAACCGTCCCAAGACACTAGCACTGTA...GCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGCAGTGATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GCAAAAGAAAGACCTCAATCTTCCCATTCCTCCCATCCCGAAGCAACCACTAATTCCTTTTTGTCAGAGTaGGTGTTTCCAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: AKERPQSSHSSHPEATTNSFLSE*VFPGGP
Trigger: AGGGCCTCCTGGAAACACCAACTCTGACAAAAAGGA...ATTAGTGGTTGCTTCGGGATGGGAGGAATGGGAAGATTGAGGTCTTTCTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 90 bp CTCATACTCACTGTCATCTTCATCCGTTGTGGGATTTTCACTAAGTaGAGGAGAATCCCTAGCTGGGAGATGTTCGGATTCACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LILTVIFIRCGIFTK*RRIPSWEMFGFTVG
Trigger: TCCCACAGTGAATCCGAACATCTCCCAGCTAGGGATTCTCCTTCACTTAGTGAAAATCCCACAACGGATGAAGATGACAGTGAGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 90 bp TCCCTAGCTGGGAGATGTTCGGATTCACTGTGGGAAATTTCAGCCTaGTCGAAACTGGAATGTCCAAACTTGGTTGTGTTGCTTTGTCTA +
Preference number: 5 (lower is better)
Translates to: SLAGRCSDSLWEISA*SKLECPNLVVLLCL
Trigger: TAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCGAACATCTCCCAGCTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp CTAAGTGAAGGAGAATCCCTAGCTGGGAGATGTTCGGATTCACTGTaGGAAATTTCAGCCTGGTCGAAACTGGAATGTCCAAACTTGGTT +
Preference number: 5 (lower is better)
Translates to: LSEGESLAGRCSDSL*EISAWSKLECPNLV
Trigger: AACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCGAACATCTCCCAGCTAGGGATTCTCCTTCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GTCAGAGTTGGTGTTTCCAGGAGGCCCTTGGTCTTGACATGGAGACTGTTGGGTATACACAAGAACTGTTaGTTTTCTTCATGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: VRVGVSRRPLVLTWRLLGIHKNC*FSSWSF
Trigger: GAAGCTCCATGAAGAAAACAAACAGTTCTTGTGTAT...ACCCAACAGTCTCCATGTCAAGACCAAGGGCCTCCTGGAAACACCAACTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp GGATTCTCGGGCTCCCAGATGACTCCTTTTTGTCAGAGTTGGTGTTTCCAGGAGATGACGTTCTCCTTATaGGCATCCATTTCTTTCACA +
Preference number: 5 (lower is better)
Translates to: GFSGSQMTPFCQSWCFQEMTFSL*ASISFT
Trigger: TGTGAAAGAAATGGATGCCAATAAGGAGAACGTCAT...CTCCTGGAAACACCAACTCTGACAAAAAGGAGTCATCTGGGAGCCCGAGAATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CTAGGGAGGCCTCAGGAAACTTACAATCATGTTAGAAGGCGAAGGAGAAGCAGGACCAGATGGCTAAAATaGTGTATCTGCCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LGRPQETYNHVRRRRRSRTRWLK*CICLFC
Trigger: ACAGAAGAGGCAGATACACAATTTTAGCCATCTGGT...CCTGCTTCTCCTTCGCCTTCTAACATGATTGTAAGTTTCCTGAGGCCTCCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 90 bp GGCAGACACAGATACTTTCTTGTTGCCCATGATGGTGTTGATTGTTaGACTCTTACCAACATTAGGGTAGCCCACCTAGAAGAGACTCAG +
Preference number: 5 (lower is better)
Translates to: GRHRYFLVAHDGVDC*TLTNIRVAHLEETQ
Trigger: CTGAGTCTCTTCTAGGTGGGCTACCCTAATGTTGGTAAGAGTTCAACAATCAACACCATCATGGGCAACAAGAAAGTATCTGTGTCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466391.1
CDS GCA 90 bp ACCTTTCTCCCAGTGTGTAGCTCCTTAAAGAGCTCCAGTAACTCCTaGTTGGATACCAGATGGCTAAAATTGTGTATCTGCCTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TFLPVCSSLKSSSNS*LDTRWLKLCICLFC
Trigger: ACAGAAGAGGCAGATACACAATTTTAGCCATCTGGTATCCAAGCAGGAGTTACTGGAGCTCTTTAAGGAGCTACACACTGGGAGAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 90 bp CACTGTGGGAAATTTCAGCCTGGTCGAAACTGGAATGTCCAAACTTaGTTGTGTTGCTTTGTCTATCATCTCTGTTTGCCTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HCGKFQPGRNWNVQT*LCCFVYHLCLPLPQ
Trigger: CTGAGGAAGAGGCAAACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCACAGATGACATTTCTGTaGCAGCCCAACCTCACATAT +
Preference number: 5 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAQMTFL*QPNLTY
Trigger: ATATGTGAGGTTGGGCTGCAACAGAAATGTCATCTG...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp GGAGATGTTCGGATTCACTGTGGGAAATTTCAGCCTGGTCGAAACTaGAATGTCCAAACTTGGTTGTGTTGCTTTGTCTATCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: GDVRIHCGKFQPGRN*NVQTWLCCFVYHLC
Trigger: ACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCGAACATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp TCACGTATAAGAAAGTACAGCAATAAGATAACTTTCTGCAGCTGGTaGCAAGCCCCTCAAATCCCTCACAAATATAGTGGGGACTACAGG +
Preference number: 5 (lower is better)
Translates to: SRIRKYSNKITFCSW*QAPQIPHKYSGDYR
Trigger: CCTGTAGTCCCCACTATATTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCTTATACGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS CCA 90 bp CCATCACGTATAAGAAAGTACAGCAATAAGATAACTTTCTGCAGCTaGTGGCAAGCCCCTCAAATCCCTCACAAATATAGTGGGGACTAC +
Preference number: 5 (lower is better)
Translates to: PSRIRKYSNKITFCS*WQAPQIPHKYSGDY
Trigger: GTAGTCCCCACTATATTTGTGAGGGATTTGAGGGGCTTGCCACCAGCTGCAGAAAGTTATCTTATTGCTGTACTTTCTTATACGTGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CAA 90 bp ACAATCATGTTAGAAGGCGAAGGAGAAGCAGGCACATCTTATATGGCCAGAGCATATTTTGGTTCCAGTTaGGTCTCCTCGGTATACACA +
Preference number: 5 (lower is better)
Translates to: TIMLEGEGEAGTSYMARAYFGSS*VSSVYT
Trigger: TGTGTATACCGAGGAGACCAAACTGGAACCAAAATA...TGCTCTGGCCATATAAGATGTGCCTGCTTCTCCTTCGCCTTCTAACATGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp ACTATCTGGACCACAATATCACTTCTCTCAATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTTCGTTCAAATGGAGTCAATATCAGC +
Preference number: 5 (lower is better)
Translates to: TIWTTISLLSMTLQS*RQKSKFRSNGVNIS
Trigger: GCTGATATTGACTCCATTTGAACGAAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGATATTGTGGTCCAGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGGTCAGCAAGTCTGCCTaGTTGATCAGAATGACGTTC +
Preference number: 5 (lower is better)
Translates to: HPEATTNLLPLYGDLLILVSKSA*LIRMTF
Trigger: GAACGTCATTCTGATCAACAAGGCAGACTTGCTGAC...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAACAGTCCGACCGTAAGTaGCCCATCTTTCACCTTTCT +
Preference number: 5 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQQSDRK*PIFHLS
Trigger: AGAAAGGTGAAAGATGGGCAACTTACGGTCGGACTG...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAAGTCTATCATCTCTGTTaGCCTCTTCCTCAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQVYHLC*PLPQSH
Trigger: GTGACTCTGAGGAAGAGGCAAACAGAGATGATAGAC...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CATCCCGAAGCAACCACTAATCTACTTCCTCTATATGGAGATTTGCTTATTCTGCCAGATGACTCCTTTTaGTCAGAGTTGGTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: HPEATTNLLPLYGDLLILPDDSF*SELVFP
Trigger: TGGAAACACCAACTCTGACAAAAAGGAGTCATCTGG...CAGAATAAGCAAATCTCCATATAGAGGAAGTAGATTAGTGGTTGCTTCGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 90 bp CATTTCTTTCACATAACATTCCAAATCCTCACATCTAAACAGGAGTaGGTTTCGAGCATCTACTATCTGGACCACAATATCACTTCTCTC +
Preference number: 5 (lower is better)
Translates to: HFFHITFQILTSKQE*VSSIYYLDHNITSL
Trigger: GAGAGAAGTGATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATGTGAGGATTTGGAATGTTATGTGAAAGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCACTGCAATTGCCCATGATGGTGTaGATTGTTGAACTCTTACCA +
Preference number: 5 (lower is better)
Translates to: QSCVTIATVNFRTFLSLQLPMMV*IVELLP
Trigger: TGGTAAGAGTTCAACAATCAACACCATCATGGGCAA...TTGCAGTGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp AAGCAGGAATGGCAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATATACACAAGAACTGTTaGTTTTCTTCATGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KQEWQVQLLPSRIRKYSNIHKNC*FSSWSF
Trigger: GAAGCTCCATGAAGAAAACAAACAGTTCTTGTGTAT...ATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTGCCATTCCTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS-3UTR CAA 90 bp CATATTCAGAGTTGTGTGACCATCGCTACAGTCAATTTTAGGACATTTTTATCATCATCACTGTTCATTTaGTTCTCTAGGAGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: HIQSCVTIATVNFRTFLSSSLFI*FSRSRW
Trigger: CCAGCGACTCCTAGAGAACAAAATGAACAGTGATGA...TGATAAAAATGTCCTAAAATTGACTGTAGCGATGGTCACACAACTCTGAATATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS-3UTR CAA 90 bp CAAGTCCAACTTCTTCCATCACGTATAAGAAAGTACAGCAATAAGATAACTTTCTATTTTGGTTCCAGTTaGGTCTCCTCGGTATACACA +
Preference number: 5 (lower is better)
Translates to: QVQLLPSRIRKYSNKITFYFGSS*VSSVYT
Trigger: TGTGTATACCGAGGAGACCAAACTGGAACCAAAATA...GAAAGTTATCTTATTGCTGTACTTTCTTATACGTGATGGAAGAAGTTGGACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS CCA 72 bp GCAGCACTCAGGCGGCCGGGGCTCTCCTCCGGCCCATaGCAACACGACCGCTGGACGAAGCTTCCCGGCTCG +
Preference number: 6 (lower is better)
Translates to: AALRRPGLSSGP*QHDRWTKLPGS
Trigger: CGAGCCGGGAAGCTTCGTCCAGCGGTCGTGTTGCCATGGGCCGGAGGAGAGCCCCGGCCGCCTGAGTGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS CCA 72 bp CCGGGGCTCTCCTCCGGCCCATGGCAACACGACCGCTaGACGAAGCTTCCCGGCTCGGCGCGTGCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: PGLSSGPWQHDR*TKLPGSARAVS
Trigger: GGAAACTGCACGCGCCGAGCCGGGAAGCTTCGTCCAGCGGTCGTGTTGCCATGGGCCGGAGGAGAGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS GCA 72 bp ACACGACCGCTGGACGAAGCTTCCCGGCTCGGCGCGTaGAGTTTCCGGGATTCACAGTTCGATCCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: TRPLDEASRLGA*SFRDSQFDPRK
Trigger: CTTCCGGGGATCGAACTGTGAATCCCGGAAACTGCACGCGCCGAGCCGGGAAGCTTCGTCCAGCGGTCGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS GCA 72 bp GGGCTTCCCCGCCCCGTTCTCAGAGCTCGCAGTGGATaGAGTCACTACACCACTCCCGGGCTTGTAACCCAT +
Preference number: 6 (lower is better)
Translates to: GLPRPVLRARSG*SHYTTPGLVTH
Trigger: ATGGGTTACAAGCCCGGGAGTGGTGTAGTGACTGCATCCACTGCGAGCTCTGAGAACGGGGCGGGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000475763.5
CDS CCA 72 bp TCCAGGGCTTCCCCGCCCCGTTCTCAGAGCTCGCAGTaGATGCAGTCACTACACCACTCCCGGGCTTGTAAC +
Preference number: 6 (lower is better)
Translates to: SRASPPRSQSSQ*MQSLHHSRACN
Trigger: GTTACAAGCCCGGGAGTGGTGTAGTGACTGCATCCACTGCGAGCTCTGAGAACGGGGCGGGGAAGCCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000475763.5
CDS CCA 72 bp GTCCTTCAGGATGTAGCGCGCAGATCGAGGCTGGTCTaGCTGTCCATGCGCTGTCATGAATCCTCGCATGTC +
Preference number: 6 (lower is better)
Translates to: VLQDVARRSRLV*LSMRCHESSHV
Trigger: GACATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTGCGCGCTACATCCTGAAGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475763.5
CDS CAA 90 bp TCTGCAGTAGAGCTTTCCTTCCAGTCCTGGCTGCAGTCCTCTTCCTaGGGACCGTCTTCTTCTGAGCACGTCTGCCAGTCGTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: SAVELSFQSWLQSSS*GPSSSEHVCQSSSS
Trigger: GGAGGAAGACGACTGGCAGACGTGCTCAGAAGAAGACGGTCCCAAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAGCTCTACTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 72 bp GTCCTTCAGGATGTAGCGCGCAGATCGAGGCTGGTCTaGCTGTCCATGCGCTGTCATGAATCCTCGCATGTA +
Preference number: 6 (lower is better)
Translates to: VLQDVARRSRLV*LSMRCHESSHV
Trigger: TACATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTGCGCGCTACATCCTGAAGGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000460584.1
CDS GCA 72 bp GGCCCAGGCACTCCGCTGCTCAGCAGTCAGCAAGTCTaGCTTGTTGATCAGAATGACGTTCTCCTTATTGGC +
Preference number: 6 (lower is better)
Translates to: GPGTPLLSSQQV*LVDQNDVLLIG
Trigger: GCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS GCA 72 bp CAACTTTGTGTTCTGGGCCTTGCCAGGAGGAGGGCCTaGTACTCAGCTTGGCAGAAACTCCAACTCATCCTT +
Preference number: 6 (lower is better)
Translates to: QLCVLGLARRRA*YSAWQKLQLIL
Trigger: AAGGATGAGTTGGAGTTTCTGCCAAGCTGAGTAGCAGGCCCTCCTCCTGGCAAGGCCCAGAACACAAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480853.1
CDS CCA 72 bp GCCTCAGAATCTGCAGTAGAGCTTTCCTTCCAGTCCTaGCTGCAGTCCTCTTCCTTGGGACCGTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: ASESAVELSFQS*LQSSSLGPSSS
Trigger: AGAAGAAGACGGTCCCAAGGAAGAGGACTGCAGCCAGGACTGGAAGGAAAGCTCTACTGCAGATTCTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CAA 72 bp CAGGCACTCCGCTGCTCAGCAGTCAGCAAGTCTGCCTaGTTGATCAGAATGACGTTCTCCTTATTGGCATCC +
Preference number: 6 (lower is better)
Translates to: QALRCSAVSKSA*LIRMTFSLLAS
Trigger: GGATGCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 72 bp CAGATCGAGGCTGGTCTGGCTGTCCATGCGCTGTCATaGATCCTCGCATGTATCCATAAGCTGTCAACAGTT +
Preference number: 6 (lower is better)
Translates to: QIEAGLAVHALS*ILACIHKLSTV
Trigger: AACTGTTGACAGCTTATGGATACATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000460584.1
CDS TCA 72 bp TCTGGCAAACGTAGCTTGTCAGGGAATCCATTCTCTTaGACGGACTCCCTCCTCCCCATGGCATACAAATCG +
Preference number: 6 (lower is better)
Translates to: SGKRSLSGNPFS*TDSLLPMAYKS
Trigger: CGATTTGTATGCCATGGGGAGGAGGGAGTCCGTTCAAGAGAATGGATTCCCTGACAAGCTACGTTTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS GCA 72 bp TCTTCTTTTTCGAAGTACATGGCCCAGGCACTCCGCTaGTCAGCAGTCAGCAAGTCTGCCTTGTTGATCAGA +
Preference number: 6 (lower is better)
Translates to: SSFSKYMAQALR*SAVSKSALLIR
Trigger: TCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCATGTACTTCGAAAAAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 72 bp CCTCCCCATGGCATACAAATCGTGCCTCAAAGAACATaGCACTTCATTCCGCGTGTGACAAACACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: PPHGIQIVPQRT*HFIPRVTNTLS
Trigger: GGAGAGAGTGTTTGTCACACGCGGAATGAAGTGCCATGTTCTTTGAGGCACGATTTGTATGCCATGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS CAA 90 bp ATGGCCCAGGCACTCCGCTGCTCAGCAGTCAGCAAGTCTGCCTTGTaGATCAGAATGACGTTCTCCTTATTGGCATCCATTTCTTTCACA +
Preference number: 6 (lower is better)
Translates to: MAQALRCSAVSKSAL*IRMTFSLLASISFT
Trigger: TGTGAAAGAAATGGATGCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CAA 90 bp TACATGGCCCAGGCACTCCGCTGCTCAGCAGTCAGCAAGTCTGCCTaGTTGATCAGAATGACGTTCTCCTTATTGGCATCCATTTCTTTC +
Preference number: 6 (lower is better)
Translates to: YMAQALRCSAVSKSA*LIRMTFSLLASISF
Trigger: GAAAGAAATGGATGCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 72 bp CAGATCGAGGCTGGTCTGGCTGTCCATGCGCTGTCATaGATCCTCGCATGTCTGTGGAGAGAAAAGAATTTT +
Preference number: 6 (lower is better)
Translates to: QIEAGLAVHALS*ILACLWREKNF
Trigger: AAAATTCTTTTCTCTCCACAGACATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475763.5
CDS CCA 72 bp GGAGAATCCCTAGCTGGGAGATGTTCGGATTCACTGTaGGAAATTTCAGCCTGGTCGAAACTGGAATGTCCA +
Preference number: 6 (lower is better)
Translates to: GESLAGRCSDSL*EISAWSKLECP
Trigger: TGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCGAACATCTCCCAGCTAGGGATTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CAA 72 bp GCACTCCGCTGCTCAGCAGTCAGCAAGTCTGCCTTGTaGATCAGAATGACGTTCTCCTTATTGGCATCCATT +
Preference number: 6 (lower is better)
Translates to: ALRCSAVSKSAL*IRMTFSLLASI
Trigger: AATGGATGCCAATAAGGAGAACGTCATTCTGATCAACAAGGCAGACTTGCTGACTGCTGAGCAGCGGAGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 72 bp GGCAGCTTCTGCTCTTTTCCATCTGCACAATGCAGATaGCATTTCTGTTGCAGCCCAACCTCACATATCCAG +
Preference number: 6 (lower is better)
Translates to: GSFCSFPSAQCR*HFCCSPTSHIQ
Trigger: CTGGATATGTGAGGTTGGGCTGCAACAGAAATGTCATCTGCATTGTGCAGATGGAAAAGAGCAGAAGCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 72 bp TCGTGCCTCAAAGAACATGGCACTTCATTCCGCGTGTaGCAAACACTCTCTCCTCTCCAAAGGAAGAGGATA +
Preference number: 6 (lower is better)
Translates to: SCLKEHGTSFRV*QTLSPLQRKRI
Trigger: TATCCTCTTCCTTTGGAGAGGAGAGAGTGTTTGTCACACGCGGAATGAAGTGCCATGTTCTTTGAGGCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460584.1
CDS GCA 72 bp CTGATCAATTGGGAGGATTCCGCTGCAAGTCATTTCTaGCTTGGTAGACACAAAAGATGGCATCACCAAGCC +
Preference number: 6 (lower is better)
Translates to: LINWEDSAASHF*LGRHKRWHHQA
Trigger: GGCTTGGTGATGCCATCTTTTGTGTCTACCAAGGCAGAAATGACTTGCAGCGGAATCCTCCCAATTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000461343.1
ENST00000466391.1
CDS CCA 72 bp AGGTGTCCAGCACTTCTCTCAATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTTCGTTCAAATGGAGTC +
Preference number: 6 (lower is better)
Translates to: RCPALLSMTLQS*RQKSKFRSNGV
Trigger: GACTCCATTTGAACGAAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGCTGGACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427461.1
CDS CAA 72 bp TCAATTGGGAGGATTCCGCTGCAAGTCATTTCTGCCTaGGTAGACACAAAAGATGGCATCACCAAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SIGRIPLQVISA*VDTKDGITKPG
Trigger: TCCTGGCTTGGTGATGCCATCTTTTGTGTCTACCAAGGCAGAAATGACTTGCAGCGGAATCCTCCCAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000461343.1
ENST00000466391.1
CDS CAA 90 bp TTTCTCCCAGTGTGTAGCTCCTTAAAGAGCTCCAGTAACTCCTGCTaGGATACCAGATGGCTAAAATTGTGTATCTGCCTCTTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: FLPVCSSLKSSSNSC*DTRWLKLCICLFCG
Trigger: CCCACAGAAGAGGCAGATACACAATTTTAGCCATCTGGTATCCAAGCAGGAGTTACTGGAGCTCTTTAAGGAGCTACACACTGGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000437613.1
CDS CCA 72 bp GGGAGATGTTCGGATTCACTGTGGGAAATTTCAGCCTaGTCGAAACTGGAATGTCCAAACTTGGTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: GRCSDSLWEISA*SKLECPNLVVL
Trigger: CAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCGAACATCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CAA 72 bp GTGATACAGGAGGAACATGATCTCTCATCTGATCAATaGGGAGGATTCCGCTGCAAGTCATTTCTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: VIQEEHDLSSDQ*GGFRCKSFLPW
Trigger: CCAAGGCAGAAATGACTTGCAGCGGAATCCTCCCAATTGATCAGATGAGAGATCATGTTCCTCCTGTATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000461343.1
ENST00000466391.1
CDS CAA 90 bp TTCAGCCTGGTCGAAACTGGAATGTCCAAACTTGGTTGTGTTGCTTaGTCTATCATCTCTGTTTGCCTCTTCCTCAGAGTCACCATTCAG +
Preference number: 6 (lower is better)
Translates to: FSLVETGMSKLGCVA*SIISVCLFLRVTIQ
Trigger: CTGAATGGTGACTCTGAGGAAGAGGCAAACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CAA 90 bp TGTGGGAAATTTCAGCCTGGTCGAAACTGGAATGTCCAAACTTGGTaGTGTTGCTTTGTCTATCATCTCTGTTTGCCTCTTCCTCAGAGT +
Preference number: 6 (lower is better)
Translates to: CGKFQPGRNWNVQTW*CCFVYHLCLPLPQS
Trigger: ACTCTGAGGAAGAGGCAAACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS TCA 72 bp AGATACTTTCTTGTTGCCCATGATGGTGTTGATTGTTaGACTCTTACCAACATTAGGGTAGCCCACCAGTCC +
Preference number: 6 (lower is better)
Translates to: RYFLVAHDGVDC*TLTNIRVAHQS
Trigger: GGACTGGTGGGCTACCCTAATGTTGGTAAGAGTTCAACAATCAACACCATCATGGGCAACAAGAAAGTATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265245.10
ENST00000437613.1
ENST00000461343.1
CDS CCA 72 bp ACCACAATATCACTTCTCTCAATGACTCTCCAGAGCTaGCGCCAAAAGTCCAAATTTCGTTCAAATGGAGTC +
Preference number: 6 (lower is better)
Translates to: TTISLLSMTLQS*RQKSKFRSNGV
Trigger: GACTCCATTTGAACGAAATTTGGACTTTTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGATATTGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 72 bp CATCTAAACAGGAGTGGGTTTCGAGCATCTACTATCTaGACCACAATATCACTTCTCTCAATGACTCTCCAG +
Preference number: 6 (lower is better)
Translates to: HLNRSGFRASTI*TTISLLSMTLQ
Trigger: CTGGAGAGTCATTGAGAGAAGTGATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACTCCTGTTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 72 bp CGGATTCACTGTGGGAAATTTCAGCCTGGTCGAAACTaGAATGTCCAAACTTGGTTGTGTTGCTTTGTCTAT +
Preference number: 6 (lower is better)
Translates to: RIHCGKFQPGRN*NVQTWLCCFVY
Trigger: ATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGACCAGGCTGAAATTTCCCACAGTGAATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CAA 72 bp GTCGAAACTGGAATGTCCAAACTTGGTTGTGTTGCTTaGTCTATCATCTCTGTTTGCCTCTTCCTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: VETGMSKLGCVA*SIISVCLFLRV
Trigger: GACTCTGAGGAAGAGGCAAACAGAGATGATAGACAAAGCAACACAACCAAGTTTGGACATTCCAGTTTCGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265245.10
CDS CCA 72 bp TTCTCTGCTTGTTTGAGTTCTTCTGGGGTAGTATTTTaGTTCCAGTTTGGTCTCCTCGGTATACACAAGAAC +
Preference number: 6 (lower is better)
Translates to: FSACLSSSGVVF*FQFGLLGIHKN
Trigger: GTTCTTGTGTATACCGAGGAGACCAAACTGGAACCAAAATACTACCCCAGAAGAACTCAAACAAGCAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000427461.1
CDS TCA 72 bp AGATACTTTCTTGTTGCCCATGATGGTGTTGATTGTTaGACTCTTACCAACATTAGGGTAGCCCACCTAGAA +
Preference number: 6 (lower is better)
Translates to: RYFLVAHDGVDC*TLTNIRVAHLE
Trigger: TTCTAGGTGGGCTACCCTAATGTTGGTAAGAGTTCAACAATCAACACCATCATGGGCAACAAGAAAGTATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466391.1
CDS CAA 72 bp TTTCTCTGCTTGTTTGAGTTCTTCTGGGGTAGTATTTaGGTTCCAGTTTGGTCTCCTCGGTATACACAAGAA +
Preference number: 6 (lower is better)
Translates to: FLCLFEFFWGSI*VPVWSPRYTQE
Trigger: TTCTTGTGTATACCGAGGAGACCAAACTGGAACCAAAATACTACCCCAGAAGAACTCAAACAAGCAGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265245.10
ENST00000427461.1