RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRTM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166159

Ensembl transcript IDs: ENST00000299194.6, ENST00000535041.5, ENST00000539859.1, ENST00000540378.1, ENST00000542529.5, ENST00000543694.1, ENST00000543730.1, ENST00000543818.5, ENST00000544489.5, ENST00000545157.1, ENST00000546157.1, ENST00000546167.5, ENST00000642521.1, ENST00000642918.1, ENST00000643163.1, ENST00000643383.1, ENST00000643791.1, ENST00000643914.1, ENST00000644226.1, ENST00000646030.2, ENST00000646885.1, ENST00000646982.1, ENST00000647164.1, ENST00000647440.1

Found 1081 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGGGGAGGCAGTGGCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGT +
Preference number: 1 (lower is better)
Translates to: SGRQWPAPGQGGSCG*AMPCALPALPTWPG
Trigger: ACCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGCCACTGCCTCCCCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp GGCAGTGGCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTGGGGATG +
Preference number: 1 (lower is better)
Translates to: GSGQRRVKVGAVAEQ*RVLSPPFLPGRVGM
Trigger: CATCCCCACCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGCCACTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GGACTCGGGGAGGCAGTGGCCAGCGCCGGGTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCC +
Preference number: 1 (lower is better)
Translates to: GLGEAVASAGSRWEL*LSNAVCSPRPSYLA
Trigger: GGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp ACCAGTGGTGTGTGGCTGGGTCCTCAGGAGGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTGGGTGGTATCCCGGGAAAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: TSGVWLGPQEAAMHT*SRSRPLGGIPGKPS
Trigger: GCTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAGGACCCAGCCACACACCACTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GCCCACCTCACCCACCCACTGCCGCATGAGCAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCTGCCAACTCCCTCTGCTCAGACCCT +
Preference number: 1 (lower is better)
Translates to: AHLTHPLPHEQGGSE*GTGARPANSLCSDP
Trigger: AGGGTCTGAGCAGAGGGAGTTGGCAGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTGCTCATGCGGCAGTGGGTGGGTGAGGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp GAGGCAACACCAGTGGTGTGTGGCTGGGTCCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCAGGCCCCTGGGTGGTATCCCGGGAA +
Preference number: 1 (lower is better)
Translates to: EATPVVCGWVLRRPP*THAAAPGPWVVSRE
Trigger: TTCCCGGGATACCACCCAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAGGACCCAGCCACACACCACTGGTGTTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GTGAGATGCGTGGGCAGGACCGAGGCAACACCAGTGGTGTGTGGCTaGGTCCTCAGGAGGCCGCCATGCACACATGCAGCCGCTCCAGGC +
Preference number: 1 (lower is better)
Translates to: VRCVGRTEATPVVCG*VLRRPPCTHAAAPG
Trigger: GCCTGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAGGACCCAGCCACACACCACTGGTGTTGCCTCGGTCCTGCCCACGCATCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp CAGGCTGTGGAGGAATCAGTGGGGGCCCCACAGGGCCTGGTGCTGTaGGATGCGTGGGCAGGACCGAGGCAACACCAGTGGTGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: QAVEESVGAPQGLVL*DAWAGPRQHQWCVA
Trigger: AGCCACACACCACTGGTGTTGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACAGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp TGTGGAGGAATCAGTGGGGGCCCCACAGGGCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCAACACCAGTGGTGTGTGGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: CGGISGGPTGPGAVR*VGRTEATPVVCGWV
Trigger: GACCCAGCCACACACCACTGGTGTTGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp GTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAGTGGGGGCCCCACAGGGCCTGGTGC +
Preference number: 1 (lower is better)
Translates to: VLKMEGERHRVTVPG*RLWRNQWGPHRAWC
Trigger: GCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp ATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCTGCAGGCTGTaGAGGAATCAGTGGGGGCCCCACAGGGCCTGGTGCTGTGAGATG +
Preference number: 1 (lower is better)
Translates to: MEGERHRVTVPGCRL*RNQWGPHRAWCCEM
Trigger: CATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCCTCTCGCCCTCCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp CTCTGGGCAGCACGTGGCCACCCGCTCCTGCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAATGAGCCTCAGGGGAGCCACCGTGTT +
Preference number: 1 (lower is better)
Translates to: LWAARGHPLLLLGSV*NKLAGNEPQGSHRV
Trigger: AACACGGTGGCTCCCCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATaGCCAGGGCCGCCTGGGGTCCCAGTAAGCAGCCCATGCCAGGCG +
Preference number: 1 (lower is better)
Translates to: DLVPAHTPKEGRLWP*PGPPGVPVSSPCQA
Trigger: CGCCTGGCATGGGCTGCTTACTGGGACCCCAGGCGGCCCTGGCCATGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp AGCTGGCAGGCAATGAGCCTCAGGGGAGCCACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAGGGTGCCACCAATGGCAAAGCACCA +
Preference number: 1 (lower is better)
Translates to: SWQAMSLRGATVFSA*HLLSPEGATNGKAP
Trigger: TGGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCTCCCCTGAGGCTCATTGCCTGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp CCCAGAGGGTGCCACCAATGGCAAAGCACCACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCAC +
Preference number: 1 (lower is better)
Translates to: PRGCHQWQSTTKSQP*SHRPGVLKMEGERH
Trigger: GTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp AGGCCTGCCAACTCCCTCTGCTCAGACCCTTGGCTTCAGGGTTCTTaGTGGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCC +
Preference number: 1 (lower is better)
Translates to: RPANSLCSDPWLQGS*WPLPEPPSRFHPRA
Trigger: GGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGGGAGTTGGCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp ACCTTCATCCCTCAGATCCCTCCCTCCCCGTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTAGGAAGAGTCACCAGCTATGGCCAC +
Preference number: 1 (lower is better)
Translates to: TFIPQIPPSPSPQCR*GGTSKVGRVTSYGH
Trigger: GTGGCCATAGCTGGTGACTCTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGACGGGGAGGGAGGGATCTGAGGGATGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp AAAGCACCACCAAGTCCCAGCCCTGAAGTCACAGGCCAGGAGTACTaGAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCTGCA +
Preference number: 1 (lower is better)
Translates to: KAPPSPSPEVTGQEY*RWRARGTESRCQAA
Trigger: TGCAGCCTGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGTGGTGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp AATAAGCTGGCAGGCAATGAGCCTCAGGGGAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCCAGAGGGTGCCACCAATGGCAAAGC +
Preference number: 1 (lower is better)
Translates to: NKLAGNEPQGSHRVL*LPPAFPRGCHQWQS
Trigger: GCTTTGCCATTGGTGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCTCCCCTGAGGCTCATTGCCTGCCAGCTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp ATTGCAGTGAGCACGCGAGAGGCTCTGTGGTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGT +
Preference number: 1 (lower is better)
Translates to: IAVSTREALWSQGDP*GRACLCCSSAHSLG
Trigger: ACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGTGCTCACTGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp TCCAGGAGCATGTGGTCAGTGTGGCCTATAGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTGTATGGTGTTTCTGAGTGCTGGGTC +
Preference number: 1 (lower is better)
Translates to: SRSMWSVWPIADPGA*WRRPGVYGVSECWV
Trigger: GACCCAGCACTCAGAAACACCATACACCCCTGGCCGACGCCATCATGCCCCTGGATCTGCTATAGGCCACACTGACCACATGCTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GGCGTCGGCCAGGGGTGTATGGTGTTTCTGAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGTTGTAGAG +
Preference number: 1 (lower is better)
Translates to: GVGQGCMVFLSAGSR*QGWCVCTLVPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAACACCATACACCCCTGGCCGACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp GAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGGAGATCCCCCACATGTTCCAAAGAT +
Preference number: 1 (lower is better)
Translates to: ECPVRKPPLAHTSLL*CGQSLGRSPTCSKD
Trigger: ATCTTTGGAACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp GAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTaGCCCACTTTAGAGGATCTCAAAGGATCCTGGTGTTACTGGTTG +
Preference number: 1 (lower is better)
Translates to: EGYHGDRRAPPGAPL*PTLEDLKGSWCYWL
Trigger: CAACCAGTAACACCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp CCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATCCCCCACATGTTCCAAAGATTTACT +
Preference number: 1 (lower is better)
Translates to: PSPEASSCTHLLALL*PELREIPHMFQRFT
Trigger: AGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp CAGGGGTGTATGGTGTTTCTGAGTGCTGGGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAG +
Preference number: 1 (lower is better)
Translates to: QGCMVFLSAGSRWQG*CVCTLVPTVVELDQ
Trigger: CTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAACACCATACACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp AAAGGATCCTGGTGTTACTGGTTGAGTTCCTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCACGCGAGAGGCTCTGTGGTCTCAGGG +
Preference number: 1 (lower is better)
Translates to: KGSWCYWLSSFLLLT*EDCSEHARGSVVSG
Trigger: CCCTGAGACCACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAACTCAACCAGTAACACCAGGATCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 90 bp ATGGTGTTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACAC +
Preference number: 1 (lower is better)
Translates to: MVFLSAGSRWQGWCV*TLVPTVVELDQLSH
Trigger: GTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp GAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGTGTGTGTGTGTGTATTAATTCTTTC +
Preference number: 1 (lower is better)
Translates to: EHVSAVRALIASVSV*PCECVCVCVCINSF
Trigger: GAAAGAATTAATACACACACACACACACACACACTCACACGGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 90 bp CTTTCAATCCATGTGACCGCACTGGTGATGCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGCATGTGGTCAGTGTGGCCTATAGCA +
Preference number: 1 (lower is better)
Translates to: LSIHVTALVMQWVCE*ISESRSMWSVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTCGCTAATTCACTCACACACCCATTGCATCACCAGTGCGGTCACATGGATTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 90 bp AGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATC +
Preference number: 1 (lower is better)
Translates to: SWTSFHTAGVLRTSF*LRRESQKSTFIPQI
Trigger: GATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCA +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPGAVR*VGRTEA
Trigger: TGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 2 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 2 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: SGSLESAGREPGVACLLEAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATC +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHLLALL*PELREI
Trigger: GATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 2 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: RWLSGSLESAGREPGVACSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCACCCACTCTCTGGTTTaGCCCCGGCTGGGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSTHSLV*PRLGAL
Trigger: TAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 2 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR CAA 90 bp ACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTaGCTTTGCTGTGGCCAGAGCTTAGGGAGATCCCCCACATGTTCC +
Preference number: 2 (lower is better)
Translates to: TGECPVRKPPLAHTS*LCCGQSLGRSPTCS
Trigger: GGAACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 2 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CAA 90 bp GGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTaGCTGTGGCCAGAGCTTAGGGAGATCCCCCACATGTTCCAAAGA +
Preference number: 2 (lower is better)
Translates to: GMPSPEASSCTHLLA*LWPELREIPHMFQR
Trigger: TCTTTGGAACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 2 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 2 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLLALL*PELREI
Trigger: GATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACTCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR CAA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: FLSAGSRWQGWCVCT*VPTVVELDQLSHCR
Trigger: CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 2 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: PGKLALPWQQVALSQTGSLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CAA 90 bp TATGGTGTTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACA +
Preference number: 2 (lower is better)
Translates to: YGVSECWVQMAGLVC*HIGTNSCRAGPAFT
Trigger: TGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAACACCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 2 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 2 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp CAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGG +
Preference number: 3 (lower is better)
Translates to: QRRVKVGAVAEQ*RVLSPPFLPGR
Trigger: CCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp GAGGCAGTGGCCAGCGCCGGGTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCC +
Preference number: 3 (lower is better)
Translates to: EAVASAGSRWEL*LSNAVCSPRPS
Trigger: GGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGCCACTGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp CAGTGGCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACC +
Preference number: 3 (lower is better)
Translates to: QWPAPGQGGSCG*AMPCALPALPT
Trigger: GGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGCCACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp GGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTaGTCTCCCCGCCCTTCCTACCTGGCCGGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: GSRWELWLSNAV*SPRPSYLAGWG
Trigger: TCCCCACCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp ACCCACCCACTGCCGCATGAGCAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCTGCCAACTCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: THPLPHEQGGSE*GTGARPANSLC
Trigger: GCAGAGGGAGTTGGCAGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTGCTCATGCGGCAGTGGGTGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp CTGTGGAGGAATCAGTGGGGGCCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAGGACCGAGGCAACACC +
Preference number: 3 (lower is better)
Translates to: LWRNQWGPHRAW*CEMRGQDRGNT
Trigger: GGTGTTGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp ATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAGTGGGGGCCCCACAGG +
Preference number: 3 (lower is better)
Translates to: MEGERHRVTVPG*RLWRNQWGPHR
Trigger: CCTGTGGGGCCCCCACTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCCTCTCGCCCTCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp CAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCGGGGAGGAGGGTGGAC +
Preference number: 3 (lower is better)
Translates to: QGASKVQGENPV*LVCWRAGRRVD
Trigger: GTCCACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp GTGGGCAGGACCGAGGCAACACCAGTGGTGTGTGGCTaGGTCCTCAGGAGGCCGCCATGCACACATGCAGCC +
Preference number: 3 (lower is better)
Translates to: VGRTEATPVVCG*VLRRPPCTHAA
Trigger: GGCTGCATGTGTGCATGGCGGCCTCCTGAGGACCCAGCCACACACCACTGGTGTTGCCTCGGTCCTGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp AGGCTGTGGAGGAATCAGTGGGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGGCAGGACCGAGGCAAC +
Preference number: 3 (lower is better)
Translates to: RLWRNQWGPHRA*CCEMRGQDRGN
Trigger: GTTGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGATTCCTCCACAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp ATCAGTGGGGGCCCCACAGGGCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCAACACCAGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: ISGGPTGPGAVR*VGRTEATPVVC
Trigger: ACACACCACTGGTGTTGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCCCCACTGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: PGKLALPWQQVALSQTGSRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 3 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGKLALPWQQVALSQTGSHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp CCTCAGATCCCTCCCTCCCCGTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTAGGAAGAGTCACCAGC +
Preference number: 3 (lower is better)
Translates to: PQIPPSPSPQCR*GGTSKVGRVTS
Trigger: GCTGGTGACTCTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGACGGGGAGGGAGGGATCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp AAGCCCAGCAGGAGAGGTGTGAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGGGGCACCACTTTGGCC +
Preference number: 3 (lower is better)
Translates to: KPSRRGVRGLPW*QEGSSRGTTLA
Trigger: GGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTCACACCTCTCCTGCTGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp CGTGTTCTCTGCCTGCCACCTGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACCACCAAGTCCCAGCCC +
Preference number: 3 (lower is better)
Translates to: RVLCLPPAFPRG*HQWQSTTKSQP
Trigger: GGGCTGGGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 3 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 3 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp GTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGGAGATCCCCCACATGT +
Preference number: 3 (lower is better)
Translates to: VRKPPLAHTSLL*CGQSLGRSPTC
Trigger: ACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp CTTGAGAAGATTGCAGTGAGCACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGGGGAAGAGCATGTCTC +
Preference number: 3 (lower is better)
Translates to: LEKIAVSTREAL*SQGDPWGRACL
Trigger: GAGACATGCTCTTCCCCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp ATGTGGTCAGTGTGGCCTATAGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTGTATGGTGTTTCTGAG +
Preference number: 3 (lower is better)
Translates to: MWSVWPIADPGA*WRRPGVYGVSE
Trigger: CTCAGAAACACCATACACCCCTGGCCGACGCCATCATGCCCCTGGATCTGCTATAGGCCACACTGACCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 3 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR GCA 72 bp CTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTTGTAGAGCTGGACCAG +
Preference number: 3 (lower is better)
Translates to: LSAGSRWQGWCV*TLVPTVVELDQ
Trigger: CTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp GAAGCCTCCTCTTGCACACACCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATCCCCCACATGTTCCAA +
Preference number: 3 (lower is better)
Translates to: EASSCTHLLALL*PELREIPHMFQ
Trigger: TTGGAACATGTGGGGGATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 3 (lower is better)
Translates to: PGKLALPWQQVALSQTGSWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp TCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGTGTGTGTGTGTGTATT +
Preference number: 3 (lower is better)
Translates to: SAVRALIASVSV*PCECVCVCVCI
Trigger: AATACACACACACACACACACACACTCACACGGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp CATGTGACCGCACTGGTGATGCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGCATGTGGTCAGTGTGG +
Preference number: 3 (lower is better)
Translates to: HVTALVMQWVCE*ISESRSMWSVW
Trigger: CCACACTGACCACATGCTCCTGGATTCGCTAATTCACTCACACACCCATTGCATCACCAGTGCGGTCACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR TCA 72 bp TGGTGTTACTGGTTGAGTTCCTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCACGCGAGAGGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: WCYWLSSFLLLT*EDCSEHARGSV
Trigger: CACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAACTCAACCAGTAACACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp ATGGTGTTTCTGAGTGCTGGGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTACCAACAGTTGTAGAG +
Preference number: 3 (lower is better)
Translates to: MVFLSAGSRWQG*CVCTLVPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAACACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp CCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCCTTCCTGCTGTTGACT +
Preference number: 3 (lower is better)
Translates to: PLWPTLEDLKGS*CYWLSSFLLLT
Trigger: AGTCAACAGCAGGAAGGAACTCAACCAGTAACACCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CCA 72 bp AGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATC +
Preference number: 3 (lower is better)
Translates to: SFHTAGVLRTSF*LRRESQKSTFI
Trigger: GATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAACACCCCTGCAGTGTGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGGCGHV*GHRGEA
Trigger: GGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCGGAGCAGCGGCGAGTaGCGCAGCAGGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRSSGE*RSRSLS
Trigger: GGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCGCCTGTCAGTCCATaGCCCGAGGGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPPVSP*PEGGRG
Trigger: GCCCCTGCCTCCCTCGGGCCATGGACTGACAGGCGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLGAPW*GQGHCS
Trigger: ACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGLGAPW*GQGHCS
Trigger: ACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGAGRCL*FCGQAV
Trigger: CACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPTLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTGCTTCTGGTCCTCGTaGTCGCCCTCGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPCFWSS*SPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGAGAGCGCACGCGTGTaGGCGAGCAGCGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGESARV*ASSEPE
Trigger: CTCTGGCTCGCTGCTCGCGCACACGCGTGCGCTCTC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRGAPG*AACQSW
Trigger: CCAGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRGAPG*AACQSW
Trigger: CCAGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCTGGCCGGGTGGGGATaGGCGCTCAGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGLAGWG*ALRPQK
Trigger: CTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACAGCCGCTGGATGGCCTaGTGCTTCCCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHSRWMA*CFPLHH
Trigger: GTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCGGCT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAGCCGCTGGATGGCCTaGTGCTTCCCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPSRWMA*CFPLHH
Trigger: GTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCGGCT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCAGGCCCTTGGCAGCTaGAGCCGCGTAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGQALGS*SRVGCE
Trigger: CTCACACCCTACGCGGCTGCAGCTGCCAAGGGCCTG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLRALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCGGAGCAGCGGCGAGTaGCGCAGCAGGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRSSGE*RSRSLS
Trigger: GGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPGAVR*VGRTEA
Trigger: TGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGCGGGAGCAGCGGCTaGCACGCAGCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSGSSG*HAAHST
Trigger: GGTGCTGTGTGCTGCGTGCCAGCCGCTGCTCCCGCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGCGHV*GHRGEA
Trigger: GGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCTCTGGACTGGCCTTaGTGCAGGGTGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGALDWP*CRVAQE
Trigger: TTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGATGGCCAGGGCCGCCTaGGGTCCCAGTAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLMARAA*GPSKQP
Trigger: GGGCTGCTTACTGGGACCCCAGGCGGCCCTGGCCAT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLLGAPW*GQGHCS
Trigger: ACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCACACGACCCCTGCAATaGTCACCGTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPTRPLQ*SPCPWL
Trigger: GAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACACACGACCCCTGCAATaGTCACCGTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHTRPLQ*SPCPWL
Trigger: GAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRGLPW*QEGSSR
Trigger: CCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTCCACCTGCCAGGACTaGCCTCCTCAAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGSTCQD*PPQRHS
Trigger: GGAGTGCCTTTGAGGAGGTCAGTCCTGGCAGGTGGA...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTCCACCTGCCAGGACTaGCCTCCTCAAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPSTCQD*PPQRHS
Trigger: GGAGTGCCTTTGAGGAGGTCAGTCCTGGCAGGTGGA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLRGAPG*AACQSM
Trigger: CATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGTGATCCAGGAGACTTaGCTCCACTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGVIQET*LHCRAS
Trigger: GCTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCAC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPAGRCL*FCGQAV
Trigger: CACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPTLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTTGCTTCTGGTCCTCGTaGTCGCCCTCGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPCFWSS*SPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCA...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGGGGACGGGGCTGCTaGGTCAGTCACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGGRGC*VSHKLR
Trigger: TCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGCGGGAGCAGCGGCTaGCACGCAGCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLSGSSG*HAAHST
Trigger: GGTGCTGTGTGCTGCGTGCCAGCCGCTGCTCCCGCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCCGCCTGTCAGTCCATaGCCCGAGGGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEPPVSP*PEGGRG
Trigger: GCCCCTGCCTCCCTCGGGCCATGGACTGACAGGCGG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLERALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGGAGAAAGGGCAGGTaGGGAGGGCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRRKGR*GGPPQH
Trigger: ATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTGGCCGGGTGGGGATaGGCGCTCAGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLAGWG*ALRPQK
Trigger: CTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACACCCACTCTCTGGTTTaGCCCCGGCTGGGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHTHSLV*PRLGAL
Trigger: TAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGACCCACTCTCTGGTTTaGCCCCGGCTGGGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGTHSLV*PRLGAL
Trigger: TAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGAAGACTGTGGCCATaGCCAGGGCCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGRLWP*PGPPGV
Trigger: GACCCCAGGCGGCCCTGGCCATGGCCACAGTCTTCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCCAGCAGGAGAGGTGTaGGAGGGTTACCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGPAGEV*EGYHGD
Trigger: GTCACCATGGTAACCCTCTCACACCTCTCCTGCTGG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGACCATCTTCACACTCTaGGGAGGGGCAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGTIFTL*GGAELG
Trigger: CCCTAGCTCTGCCCCTCCTCAGAGTGTGAAGATGGT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACTTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCAGCTCAGGGGTTCATaGTGCGGCAGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPQLRGS*CGSRLY
Trigger: GTAAAGACGGCTGCCGCAGCATGAACCCCTGAGCTG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLRGAPG*AACQSM
Trigger: CATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGACAGGTCCAACCGCTaGAGGCTGGAGAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLDRSNR*RLERLA
Trigger: CGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTGTC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLAPWAG*RQAGPS
Trigger: GCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLESVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSTLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGTGCTTCTGGTCCTCGTaGTCGCCCTCGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLECFWSS*SPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCA...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGAGGTGGACTGCTTGTaGCAGACGGGGGACGGGGCT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPEVDCL*QTGDGA
Trigger: AGCCCCGTCCCCCGTCTGCCACAAGCAGTCCACCTC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGCGGGAGCAGCGGCTaGCACGCAGCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSGSSG*HAAHST
Trigger: GGTGCTGTGTGCTGCGTGCCAGCCGCTGCTCCCGCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAGCGGGAGCAGCGGCTaGCACGCAGCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLESGSSG*HAAHST
Trigger: GGTGCTGTGTGCTGCGTGCCAGCCGCTGCTCCCGCT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTRALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPDSADG*SEARGS
Trigger: GCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACTGGCCGGGTGGGGATaGGCGCTCAGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPLAGWG*ALRPQK
Trigger: CTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCTGGCCGGGTGGGGATaGGCGCTCAGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSLAGWG*ALRPQK
Trigger: CTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGLQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAATGGCCAGGGCCGCCTaGGGTCCCAGTAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPMARAA*GPSKQP
Trigger: GGGCTGCTTACTGGGACCCCAGGCGGCCCTGGCCAT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGATGGCCAGGGCCGCCTaGGGTCCCAGTAAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEMARAA*GPSKQP
Trigger: GGGCTGCTTACTGGGACCCCAGGCGGCCCTGGCCAT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGCCGCCTGTCAGTCCTaGGTCCCGGTTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPAACQS*VPVPLA
Trigger: GGCTAGAGGAACCGGGACCCAGGACTGACAGGCGGC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGACGGGGGACGGGGCTaGTGGGTCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPDGGRG*WVSHKL
Trigger: CAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCTCAGGGGTTCATGCTaGGGCAGCCGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHLRGSC*GSRLYS
Trigger: AGAGTAAAGACGGCTGCCGCAGCATGAACCCCTGAG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCGCTGGATGGCCTGCTaGTTCCCCCTGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLERWMAC*FPLHHR
Trigger: TCGGTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAGCCGCTGGATGGCCTaGTGCTTCCCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLESRWMA*CFPLHH
Trigger: GTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCGGCT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACAGGCCCTTGGCAGCTaGAGCCGCGTAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPQALGS*SRVGCE
Trigger: CTCACACCCTACGCGGCTGCAGCTGCCAAGGGCCTG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCAGGCCCTTGGCAGCTaGAGCCGCGTAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACQALGS*SRVGCE
Trigger: CTCACACCCTACGCGGCTGCAGCTGCCAAGGGCCTG...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLERGAPG*AACQSM
Trigger: CATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCTGGAAAACTTGCACTaGCTTGGCAGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLENLH*LGSRWL
Trigger: GAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEMDRSR*RSSGEC
Trigger: GCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCAT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACMDRSR*RSSGEC
Trigger: GCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCAT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCCCGCCCTTCCTACCTaGCCGGGTGGGGATGGGCGC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNPALPT*PGGDGR
Trigger: GCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGCCGCTCCAGGCCCCTaGGTGGTATCCCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTAAPGP*VVSRES
Trigger: GCTTTCCCGGGATACCACCCAGGGGCCTGGAGCGGC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGGAAAAAGGCGCCTGTaGATGAATCGCTGCCGACCA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGGKRRL*MNRCRP
Trigger: TGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGGGCAGCGCTCACCCTaGCCACGCTCACATTTCAGT +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLGQRSP*PRSHFS
Trigger: ACTGAAATGTGAGCGTGGCCAGGGTGAGCGCTGCCC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCCGCCTGTCAGTCCTaGGTCCCGGTTCCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEAACQS*VPVPLA
Trigger: GGCTAGAGGAACCGGGACCCAGGACTGACAGGCGGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSPAPAW*GPRLSG
Trigger: CCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPLGAPW*GQGHCS
Trigger: ACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGGTGGTACTTGGCCATaGGGGAGGCGTAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPGGTWP*GRRRCS
Trigger: GCTGCATCTACGCCTCCCTCATGGCCAAGTACCACC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPRGLPW*QEGSSR
Trigger: CCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAAAGGCGCCTGTGGATaGATCGCTGCCGACCACAGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPKGACG*IAADHR
Trigger: CCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGACGGGGGACGGGGCTaGTGGGTCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPDGGRG*WVSHKL
Trigger: CAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCACCAGGAGGTGGACTaGTTGTGGCAGACGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACHQEVD*LWQTGD
Trigger: GTCCCCCGTCTGCCACAAGCAGTCCACCTCCTGGTG...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCAGCTCAGGGGTTCATaGTGCGGCAGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLQLRGS*CGSRLY
Trigger: GTAAAGACGGCTGCCGCAGCATGAACCCCTGAGCTG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCGCTGGATGGCCTGCTaGTTCCCCCTGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTRWMAC*FPLHHR
Trigger: TCGGTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPSPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCGGAGCAGCGGCGAGTaGCGCAGCAGGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHRSSGE*RSRSLS
Trigger: GGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACAPWAG*RQAGPS
Trigger: GCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPTLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTGCTTCTGGTCCTCGTaGTCGCCCTCGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPCFWSS*SPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCCAGTAAGCAGCCCATaGCAGGCGTCCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPPVSSP*QASSVH
Trigger: GTGGACAGAGGACGCCTGGCATGGGCTGCTTACTGG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACAGCTCAGGGGTTCATaGTGCGGCAGCTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPQLRGS*CGSCRL
Trigger: AAGACGGCAGCTGCCGCAGCATGAACCCCTGAGCTG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535041.5
ENST00000643163.1
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGGGGACGGGGCTGCTaGGTCAGTCACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGGRGC*VSHKLR
Trigger: TCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCACAGCACCAGGAGGTaGACTGCTTGTGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLHSTRR*TACGRR
Trigger: CCGTCTGCCACAAGCAGTCCACCTCCTGGTGCTGTG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCCGCCTGTCAGTCCATaGCCCGAGGGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNPPVSP*PEGGRG
Trigger: GCCCCTGCCTCCCTCGGGCCATGGACTGACAGGCGG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAGGAGAAAGGGCAGGTaGGGAGGGCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPRRKGR*GGPPQH
Trigger: ATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGCGHV*GHRGEA
Trigger: GGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCTCTGGACTGGCCTTaGTGCAGGGTGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPALDWP*CRVAQE
Trigger: TTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCACCCACTCTCTGGTTTaGCCCCGGCTGGGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLTHSLV*PRLGAL
Trigger: TAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGAAAATCCCCAGATCTaGTACCAGCCCACACGCCAA +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPENPQI*YQPTRQ
Trigger: TTGGCGTGTGGGCTGGTACCAGATCTGGGGATTTTC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGAAAATCCCCAGATCTaGTACCAGCCCACACGCCAA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGENPQI*YQPTRQ
Trigger: TTGGCGTGTGGGCTGGTACCAGATCTGGGGATTTTC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCAGCCGTCTTTACTCTaGCTGCAAACGCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPQPSLL*LQTPSI
Trigger: GATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCTG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCAGCCGCGTAGGGTGTaGGCCGCTGGATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHQPRRV*AAGWPA
Trigger: AGCAGGCCATCCAGCGGCTCACACCCTACGCGGCTG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCTGTTATTGCGCAGCTaGAGCTCAGTCAGATTCGTC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGLLLRS*SSVRFV
Trigger: GACGAATCTGACTGAGCTTCAGCTGCGCAATAACAG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAACACGACCCCTGCAATaGTCACCGTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPTRPLQ*SPCPWL
Trigger: GAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGTGGTACTTGGCCATaGGGGAGGCGTAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGGTWP*GRRRCS
Trigger: GCTGCATCTACGCCTCCCTCATGGCCAAGTACCACC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGTGGTACTTGGCCATaGGGGAGGCGTAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGGTWP*GRRRCS
Trigger: GCTGCATCTACGCCTCCCTCATGGCCAAGTACCACC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSRGLPW*QEGSSR
Trigger: CCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACCAGCAGGAGAGGTGTaGGAGGGTTACCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPPAGEV*EGYHGD
Trigger: GTCACCATGGTAACCCTCTCACACCTCTCCTGCTGG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTACCATCTTCACACTCTaGGGAGGGGCAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPTIFTL*GGAELG
Trigger: CCCTAGCTCTGCCCCTCCTCAGAGTGTGAAGATGGT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCGCTGGATGGCCTGCTaGTTCCCCCTGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWRWMAC*FPLHHR
Trigger: TCGGTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCAGGCCCTTGGCAGCTaGAGCCGCGTAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWQALGS*SRVGCE
Trigger: CTCACACCCTACGCGGCTGCAGCTGCCAAGGGCCTG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGTGATCCAGGAGACTTaGCTCCACTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLVIQET*LHCRAS
Trigger: GCTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCAC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACGGAGCAGCGGCGAGTaGCGCAGCAGGTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPRSSGE*RSRSLS
Trigger: GGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTPGAVR*VGRTEA
Trigger: TGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCCCCACAGGGCCTGGTaGTGTGAGATGCGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPPHRAW*CEMRGQ
Trigger: CTGCCCACGCATCTCACAGCACCAGGCCCTGTGGGG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLESHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCAGCTCAGGGGTTCATaGTGCGGCAGCTGCCGTCTT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSQLRGS*CGSCRL
Trigger: AAGACGGCAGCTGCCGCAGCATGAACCCCTGAGCTG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535041.5
ENST00000643163.1
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTGTGGATGAATCGCTaGCGACCACAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLWMNR*RPQGGG
Trigger: TCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGGGGACGGGGCTGCTaGGTCAGTCACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGGRGC*VSHKLR
Trigger: TCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCACAGCACCAGGAGGTaGACTGCTTGTGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLHSTRR*TACGRR
Trigger: CCGTCTGCCACAAGCAGTCCACCTCCTGGTGCTGTG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCACAGCACCAGGAGGTaGACTGCTTGTGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSHSTRR*TACGRR
Trigger: CCGTCTGCCACAAGCAGTCCACCTCCTGGTGCTGTG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACCGCCTGTCAGTCCATaGCCCGAGGGAGGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPPPVSP*PEGGRG
Trigger: GCCCCTGCCTCCCTCGGGCCATGGACTGACAGGCGG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIGCGHV*GHRGEA
Trigger: GGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSGCGHV*GHRGEA
Trigger: GGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPMDRSR*RSSGEC
Trigger: GCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCAT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWMDRSR*RSSGEC
Trigger: GCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCAT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPDSADG*SEARGS
Trigger: GCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCCTCTGGGCAGCACGTaGCCACCCGCTCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNPLGST*PPAPAP
Trigger: AGGAGCAGGAGCGGGTGGCCACGTGCTGCCCAGAGG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWQGGSE*GTGARP
Trigger: AGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPQGGSE*GTGARP
Trigger: AGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGGAAGACTGTGGCCATaGCCAGGGCCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNGRLWP*PGPPGV
Trigger: GACCCCAGGCGGCCCTGGCCATGGCCACAGTCTTCC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAAAGAAGGAAGACTGTaGCCATGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPKEGRL*PWPGPP
Trigger: AGGCGGCCCTGGCCATGGCCACAGTCTTCCTTCTTT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAAAGAAGGAAGACTGTaGCCATGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLKEGRL*PWPGPP
Trigger: AGGCGGCCCTGGCCATGGCCACAGTCTTCCTTCTTT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPLGAPW*GQGHCS
Trigger: ACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCAGCAGGAGAGGTGTaGGAGGGTTACCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPAGEV*EGYHGD
Trigger: GTCACCATGGTAACCCTCTCACACCTCTCCTGCTGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCTCCACCTGCCAGGACTaGCCTCCTCAAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTSTCQD*PPQRHS
Trigger: GGAGTGCCTTTGAGGAGGTCAGTCCTGGCAGGTGGA...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGACGGGGGACGGGGCTaGTGGGTCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPDGGRG*WVSHKL
Trigger: CAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCGCTGGATGGCCTGCTaGTTCCCCCTGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNRWMAC*FPLHHR
Trigger: TCGGTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCGCTGGATGGCCTGCTaGTTCCCCCTGCACCACCGA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHRWMAC*FPLHHR
Trigger: TCGGTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGCCGCTGGATGGCCTaGTGCTTCCCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSRWMA*CFPLHH
Trigger: GTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCGGCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLESRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAPWAG*RQAGPS
Trigger: GCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPAGRCL*FCGQAV
Trigger: CACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGCTGTGGCTGAGCAATaGCGTGTGCTCTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNAVAEQ*RVLSPP
Trigger: GGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPGAVR*VGRTEA
Trigger: TGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCTCAGGGGTTCATGCTaGGGCAGCTGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSLRGSC*GSCRLY
Trigger: GTAAAGACGGCAGCTGCCGCAGCATGAACCCCTGAG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535041.5
ENST00000643163.1
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGGGGACGGGGCTGCTaGGTCAGTCACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGGRGC*VSHKLR
Trigger: TCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGCGGGAGCAGCGGCTaGCACGCAGCACACAGCACC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSGSSG*HAAHST
Trigger: GGTGCTGTGTGCTGCGTGCCAGCCGCTGCTCCCGCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCGGGCCCTGTCGCTCTaGGGAGAGAGGAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIRALSL*GERSPW
Trigger: CCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSDSADG*SEARGS
Trigger: GCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLDSADG*SEARGS
Trigger: GCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATC...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEDSADG*SEARGS
Trigger: GCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGGGTGCAGGCAAGCTaGTCCAAGCGTCCCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNRVQAS*SKRPPR
Trigger: CCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCCAGGGGCACCACTTTaGCCCACTTTAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPPGAPL*PTLEDL
Trigger: GAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGGGCCCCACAGGGCCTaGTGCTGTGAGATGCGTGGG +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPGPHRA*CCEMRG
Trigger: CCCACGCATCTCACAGCACCAGGCCCTGTGGGGCCC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLELQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGGAAGACTGTGGCCATaGCCAGGGCCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPGRLWP*PGPPGV
Trigger: GACCCCAGGCGGCCCTGGCCATGGCCACAGTCTTCC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAAAGAAGGAAGACTGTaGCCATGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSKEGRL*PWPGPP
Trigger: AGGCGGCCCTGGCCATGGCCACAGTCTTCCTTCTTT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGAAAATCCCCAGATCTaGTACCAGCCCACACGCCAA +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLENPQI*YQPTRQ
Trigger: TTGGCGTGTGGGCTGGTACCAGATCTGGGGATTTTC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACACGCTCACATTTCAGTaGAAAAAGGCGCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHTLTFQ*KKAPVD
Trigger: ATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGCGGGGAGTGACAGCTaGGGTGCATCTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEAGSDS*GASVMT
Trigger: TGTCATCACAGATGCACCCCAGCTGTCACTCCCCGC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCGGGGAGTGACAGCTaGGGTGCATCTGTGATGACA +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSAGSDS*GASVMT
Trigger: TGTCATCACAGATGCACCCCAGCTGTCACTCCCCGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAATATCCAGCCCAGCTaGGCTATTCTCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPNIQPS*AILVLQ
Trigger: CTGGAGGACGAGAATAGCTCAGCTGGGCTGGATATT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCACACGACCCCTGCAATaGTCACCGTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPTRPLQ*SPCPWL
Trigger: GAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGTGGTACTTGGCCATaGGGGAGGCGTAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGGTWP*GRRRCS
Trigger: GCTGCATCTACGCCTCCCTCATGGCCAAGTACCACC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGTCCACCTGCCAGGACTaGCCTCCTCAAAGGCACTCC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWSTCQD*PPQRHS
Trigger: GGAGTGCCTTTGAGGAGGTCAGTCCTGGCAGGTGGA...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGGGTCAGTCACAAACTaGGAAGGAAAGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLGSVTN*EGKRGM
Trigger: CATCCCTCTCTTTCCTTCTCAGTTTGTGACTGACCC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRLYSD*KRLQSG
Trigger: ACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACG...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCTCAGGGGTTCATGCTaGGGCAGCCGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLRGSC*GSRLYS
Trigger: AGAGTAAAGACGGCTGCCGCAGCATGAACCCCTGAG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCCTGCTGCTTCCCCCTaGACCACCGACGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSPAASP*TTDAHA
Trigger: TGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAGCAGG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCATG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPRGAPG*AACQSM
Trigger: CATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000643163.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGTGATCCAGGAGACTTaGCTCCACTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWVIQET*LHCRAS
Trigger: GCTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCAC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGTGATCCAGGAGACTTaGCTCCACTGCAGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPVIQET*LHCRAS
Trigger: GCTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCAC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNAPWAG*RQAGPS
Trigger: GCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSVGRL*WAPAPA
Trigger: AGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAGRCL*FCGQAV
Trigger: CACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSITLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVTLAGR*LCFCGQ
Trigger: CTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTGCTTCTGGTCCTCGTaGTCGCCCTCGGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVCFWSS*SPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCA...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCCGGTGTGGCTTGTCTaGTGGAGGGCGGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVPVWLV*WRAGRR
Trigger: CCTCCTCCCCGCCCTCCAGCAGACAAGCCACACCGG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGGGCGACAGGGGAATaGCCAGTCCGGAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNRATGE*PVRKPP
Trigger: AGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCCGCCATGCACACATaGAGCCGCTCCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAAMHT*SRSRPL
Trigger: CAGGGGCCTGGAGCGGCTGCATGTGTGCATGGCGGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGTGGCCACCCGCTCCTaGTCCTGGGCTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPVATRS*SWALSA
Trigger: TGCAGACAGAGCCCAGGAGCAGGAGCGGGTGGCCAC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCTGGAAAACTTGCACTaGCTTGGCAGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLENLH*LGSRWL
Trigger: GAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCAGTAAGCAGCCCATaGCAGGCGTCCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPVSSP*QASSVH
Trigger: GTGGACAGAGGACGCCTGGCATGGGCTGCTTACTGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGAGAGCGCACGCGTGTaGGCGAGCAGCGAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIESARV*ASSEPE
Trigger: CTCTGGCTCGCTGCTCGCGCACACGCGTGCGCTCTC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPVRPS*DSYRNP
Trigger: TGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGCAAGAGGGTTCGGGTaGCTGCGGGCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVARGFG*LRARLG
Trigger: CCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPMDRSR*RSSGEC
Trigger: GCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCAT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCTGGCCGGGTGGGGATaGGCGCTCAGGCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVLAGWG*ALRPQK
Trigger: CTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAGCGCCGGGTCAAGGTaGGAGCTGTGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWSAGSR*ELWLSN
Trigger: ATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHTREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGAGGGTGCCACCAATaGCAAAGCACCACCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLRGCHQ*QSTTKS
Trigger: GGACTTGGTGGTGCTTTGCCATTGGTGGCACCCTCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPQGGSE*GTGARP
Trigger: AGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGGGCAGCGCTCACCCTaGCCACGCTCACATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPGQRSP*PRSHFS
Trigger: ACTGAAATGTGAGCGTGGCCAGGGTGAGCGCTGCCC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCTGTTATTGCGCAGCTaGAGCTCAGTCAGATTCGTC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPLLLRS*SSVRFV
Trigger: GACGAATCTGACTGAGCTTCAGCTGCGCAATAACAG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACTGTTATTGCGCAGCTaGAGCTCAGTCAGATTCGTC +
Preference number: 4 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPLLLRS*SSVRFV
Trigger: GACGAATCTGACTGAGCTTCAGCTGCGCAATAACAG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACACACGACCCCTGCAATaGTCACCGTGCCCATGGCTC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHTRPLQ*SPCPWL
Trigger: GAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACGGCCACCACCATCATaGTGCAGACGACGCCGCACA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPRPPPS*CRRRRT
Trigger: TGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGGGCTGGCGCTTTTTaGGCTCCCGGTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGAGAF*APGGTW
Trigger: CCAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGCAGATCCAGGGGCATaGTGGCGTCGGCCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRADPGA*WRRPGV
Trigger: CACCCCTGGCCGACGCCATCATGCCCCTGGATCTGC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCACCATCTTCACACTCTaGGGAGGGGCAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPTIFTL*GGAELG
Trigger: CCCTAGCTCTGCCCCTCCTCAGAGTGTGAAGATGGT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAAAGGCGCCTGTGGATaGATCGCTGCCGACCACAGG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHKGACG*IAADHR
Trigger: CCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCTCAGGGGTTCATGCTaGGGCAGCCGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLRGSC*GSRLYS
Trigger: AGAGTAAAGACGGCTGCCGCAGCATGAACCCCTGAG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCCGCTGGATGGCCTaGTGCTTCCCCCTGCACCAC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISRWMA*CFPLHH
Trigger: GTGGTGCAGGGGGAAGCAGCAGGCCATCCAGCGGCT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCAGGCCCTTGGCAGCTaGAGCCGCGTAGGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIQALGS*SRVGCE
Trigger: CTCACACCCTACGCGGCTGCAGCTGCCAAGGGCCTG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGACAGGTCCAACCGCTaGAGGCTGGAGAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPDRSNR*RLERLA
Trigger: CGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTGTC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRAGRCL*FCGQAV
Trigger: CACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCTGGTGCTGTGAGATaGGTGGGCAGGACCGAGGCA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPGAVR*VGRTEA
Trigger: TGCCTCGGTCCTGCCCACGCATCTCACAGCACCAGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCCTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCTGGAAAACTTGCACTaGCTTGGCAGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLENLH*LGSRWL
Trigger: GAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCCAGTAAGCAGCCCATaGCAGGCGTCCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNPVSSP*QASSVH
Trigger: GTGGACAGAGGACGCCTGGCATGGGCTGCTTACTGG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGGAGAAAGGGCAGGTaGGGAGGGCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNRRKGR*GGPPQH
Trigger: ATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGCTCTGGACTGGCCTTaGTGCAGGGTGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPALDWP*CRVAQE
Trigger: TTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCTCTGGACTGGCCTTaGTGCAGGGTGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPALDWP*CRVAQE
Trigger: TTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTCAAGGTGGGAGCTGTaGCTGAGCAATGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSRWEL*LSNAVC
Trigger: GCACACGGCATTGCTCAGCCACAGCTCCCACCTTGA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGACTCGGGGAGGCAGTaGCCAGCGCCGGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRDSGRQ*PAPGQG
Trigger: ACCTTGACCCGGCGCTGGCCACTGCCTCCCCGAGTC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGTGTGGCTTGTCTGCTaGAGGGCGGGGAGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIVWLVC*RAGRRV
Trigger: CACCCTCCTCCCCGCCCTCCAGCAGACAAGCCACAC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCCAGGGGCACCACTTTaGCCCACTTTAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTPGAPL*PTLEDL
Trigger: GAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSILQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLELSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCAGGGAGGGTCGGAGTaGGGCACAGGAGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIQGGSE*GTGARP
Trigger: AGGCCTAGCTCCTGTGCCCCACTCCGACCCTCCCTG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGAAGACTGTGGCCATaGCCAGGGCCGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRGRLWP*PGPPGV
Trigger: GACCCCAGGCGGCCCTGGCCATGGCCACAGTCTTCC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLTPSSV*THAGYS
Trigger: ACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAATATCCAGCCCAGCTaGGCTATTCTCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTNIQPS*AILVLQ
Trigger: CTGGAGGACGAGAATAGCTCAGCTGGGCTGGATATT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCCTCGGTCTCCGTGTaGCCGTGTGAGTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPASVSV*PCECVC
Trigger: ACACACACACTCACACGGTCACACGGAGACCGAGGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGAGCCTGATGCCTCCTaGGCCTGTGAGCATGACACC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPEPDAS*ACEHDT
Trigger: GGTGTCATGCTCACAGGCTCAGGAGGCATCAGGCTC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACTTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGGGTCAGTCACAAACTaGGAAGGAAAGAGAGGGATG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLEGSVTN*EGKRGM
Trigger: CATCCCTCTCTTTCCTTCTCAGTTTGTGACTGACCC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGACGGGGGACGGGGCTaGTGGGTCAGTCACAAACTG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSDGGRG*WVSHKL
Trigger: CAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLRLYSD*KRLQSG
Trigger: ACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCAGCTCAGGGGTTCATaGTGCGGCAGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNQLRGS*CGSRLY
Trigger: GTAAAGACGGCTGCCGCAGCATGAACCCCTGAGCTG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGAGACTTGCCTCCACTaGAGGGCGAGCCTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRETCLH*RASLPL
Trigger: GAGGGGCAGGCTCGCCCTGCAGTGGAGGCAAGTCTC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIAPWAG*RQAGPS
Trigger: GCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCTCAGGAGGCCGCCATaGACACATGCAGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVLRRPP*THAAAP
Trigger: TGGAGCGGCTGCATGTGTGCATGGCGGCCTCCTGAG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGTCACGGTGCCAGGCTaGAGGCTGTGGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPVTVPG*RLWRNQ
Trigger: CTGATTCCTCCACAGCCTGCAGCCTGGCACCGTGAC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGCACAGAGTCACGGTaGCAGGCTGCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGTESR*QAAGCG
Trigger: TCCACAGCCTGCAGCCTGGCACCGTGACTCTGTGCC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCTGGAAAACTTGCACTaGCTTGGCAGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPLENLH*LGSRWL
Trigger: GAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCAGTAAGCAGCCCATaGCAGGCGTCCTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPVSSP*QASSVH
Trigger: GTGGACAGAGGACGCCTGGCATGGGCTGCTTACTGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCTCAGGGGTTCATGCTaGGGCAGCTGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNLRGSC*GSCRLY
Trigger: GTAAAGACGGCAGCTGCCGCAGCATGAACCCCTGAG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535041.5
ENST00000643163.1
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACACAGCACCAGGAGGTaGACTGCTTGTGGCAGACGG +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPHSTRR*TACGRR
Trigger: CCGTCTGCCACAAGCAGTCCACCTCCTGGTGCTGTG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGCAGGCAGAGCGCAGTaGGCACTGGTGCCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIAGRAQ*ALVPES
Trigger: AGACTCTGGCACCAGTGCCCACTGCGCTCTGCCTGC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPAGWRG*RKPSLA
Trigger: TGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCCAACCGCTGCAGGCTaGAGAGGTTGGCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIPTAAG*RGWRKP
Trigger: GGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCAGACCAGGGGGCAACTaGGCCAGGCCGTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVRPGGN*ARPLMD
Trigger: GTCCATCAACGGCCTGGCCCAGTTGCCCCCTGGTCT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGCCTTGGTGCAGGGTaGCCCAGGAATATCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGLGAG*PRNIQP
Trigger: GGGCTGGATATTCCTGGGCCACCCTGCACCAAGGCC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGCTCTGGACTGGCCTTaGTGCAGGGTGGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIALDWP*CRVAQE
Trigger: TTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIGLSRL*TGLGAG
Trigger: CCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGAGAGAACCCGGTGTaGCTTGTCTGCTGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGENPV*LVCWRA
Trigger: CGCCCTCCAGCAGACAAGCCACACCGGGTTCTCTCC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCACGCGAGAGGCTCTGTaGTCTCAGGGAGACCCCTGG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSITREAL*SQGDPW
Trigger: CCAGGGGTCTCCCTGAGACCACAGAGCCTCTCGCGT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCCAGGGGCACCACTTTaGCCCACTTTAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPPGAPL*PTLEDL
Trigger: GAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGCTCCAGGCCCCTGGGTaGTATCCCGGGAAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRLQAPG*YPGKAQ
Trigger: CTGGGCTTTCCCGGGATACCACCCAGGGGCCTGGAG...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTLSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAAACTTGCACTGCCTTaGCAGCAGGTGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWKLALP*QQVALS
Trigger: GGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAAAGAAGGAAGACTGTaGCCATGGCCAGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNKEGRL*PWPGPP
Trigger: AGGCGGCCCTGGCCATGGCCACAGTCTTCCTTCTTT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCAGCCGTCTTTACTCTaGCTGCAAACGCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTQPSLL*LQTPSI
Trigger: GATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCTG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACACGCCCACGCAGAGGTaGATAGCAGCACTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHTPTQR*IAALCL
Trigger: AAGACAGAGTGCTGCTATTCACCTCTGCGTGGGCGT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAATATCCAGCCCAGCTaGGCTATTCTCGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWNIQPS*AILVLQ
Trigger: CTGGAGGACGAGAATAGCTCAGCTGGGCTGGATATT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGTGGTACTTGGCCATaGGGGAGGCGTAGATGCAGC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGGTWP*GRRRCS
Trigger: GCTGCATCTACGCCTCCCTCATGGCCAAGTACCACC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGGGAGCTGTGGCTaGGCAATGCCGTGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRGGSCG*AMPCAL
Trigger: GAGAGCACACGGCATTGCTCAGCCACAGCTCCCACC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCGTTCCTTCCTGCTGTTaGCTTGAGAAGATTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGKLALPWQQVALSQTGSVPSCC*LEKIAV
Trigger: CACTGCAATCTTCTCAAGTCAACAGCAGGAAGGAAC...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIRGLPW*QEGSSR
Trigger: CCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCAGAGGGTTACCATGGTaGCAGGAGGGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVRGLPW*QEGSSR
Trigger: CCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCAAGTCCCAGCCCTaGAGTCACAGGCCAGGAGTA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPTKSQP*SHRPGV
Trigger: TACTCCTGGCCTGTGACTTCAGGGCTGGGACTTGGT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCTCAGGGGTTCATGCTaGGGCAGCCGTCTTTACTCT +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNLRGSC*GSRLYS
Trigger: AGAGTAAAGACGGCTGCCGCAGCATGAACCCCTGAG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGTCCACCTCCAGGCTaGGGCTGTCACACTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISPPPG*GCHTCR
Trigger: CCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGACAGGTCCAACCGCTaGAGGCTGGAGAGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRDRSNR*RLERLA
Trigger: CGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTGTC...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACCGACCTGCAGCAGCTaGAGGTTTGCTAGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPPTCSS*RFARGS
Trigger: TGAACCCCTAGCAAACCTGCAGCTGCTGCAGGTCGG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGGTTATCCCCGACCTaGAGCAGCTGCAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGLSPT*SSCRFA
Trigger: AGCAAACCTGCAGCTGCTGCAGGTCGGGGATAACCC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCCGCACACGACCCCTaGAATGATCACCGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAAHDP*NDHRAH
Trigger: ATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHATEEI*FWSSCS
Trigger: CGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCACACCTCCTTGCTTTaGTGTGGCCAGAGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNHTSLL*CGQSLG
Trigger: CCCTAAGCTCTGGCCACAGCAAAGCAAGGAGGTGTG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTGGAAAACTTGCACTaGCTTGGCAGCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLENLH*LGSRWL
Trigger: GAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPPVRPS*DSYRNP
Trigger: TGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGG...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLPVRPS*DSYRNP
Trigger: TGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAGGAGAAAGGGCAGGTaGGGAGGGCCTCCACAGCAT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSRRKGR*GGPPQH
Trigger: ATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHGESPA*QGTQLI
Trigger: AATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: RWLSGSLESAGREPGVACVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATC +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPLLALL*PELREI
Trigger: GATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAACACCAGTGGTGTGTaGCTGGGTCCTCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSNTSGV*LGPQEA
Trigger: GGCCTCCTGAGGACCCAGCCACACACCACTGGTGTT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWLSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCACCCACTCTCTGGTTTaGCCCCGGCTGGGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSITHSLV*PRLGAL
Trigger: TAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTCTGCTCAGACCCTTaGCTTCAGGGTTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLCSDP*LQGSCW
Trigger: CCAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSPCPGS*CCYCAA
Trigger: AGCTGCGCAATAACAGCATCAGGACCCTGGACAGGG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTTPSSV*THAGYS
Trigger: ACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTTGAGAAGATTGCAGTaGGCACGCGAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLRRLQ*ARERLC
Trigger: ACAGAGCCTCTCGCGTGCTCACTGCAATCTTCTCAA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCACCATCTTCACACTCTaGGGAGGGGCAGAGCTAGGG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVTIFTL*GGAELG
Trigger: CCCTAGCTCTGCCCCTCCTCAGAGTGTGAAGATGGT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLRLYSD*KRLQSG
Trigger: ACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISRSRF*RRLERS
Trigger: GCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCT...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCAGGGAGCCTCGAAAGTaGAGGGAGAGAACCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVREPRK*RERTRC
Trigger: ACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGCTTTCCCCAGAGGGTaGCACCAATGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSAFPRG*HQWQST
Trigger: GGTGCTTTGCCATTGGTGGCACCCTCTGGGGAAAGC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTCTCTGCCTGCCACCTaGTTTCCCCAGAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRSLPAT*FPQRVP
Trigger: TGGCACCCTCTGGGGAAAGCAGGTGGCAGGCAGAGA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGAGCCACCGTGTTCTCTaGCTGCCACCTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRSHRVL*LPPAFP
Trigger: GGGGAAAGCAGGTGGCAGGCAGAGAACACGGTGGCT...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCTGTGGATGAATCGCTaGCGACCACAGGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVLWMNR*RPQGGG
Trigger: TCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPPVRPS*DSYRNP
Trigger: TGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAGTGCTGGGTCCAGATaGCAGGGCTGGTGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSAGSR*QGWCVC
Trigger: GCAAACACACCAGCCCTGCCATCTGGACCCAGCACT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACCAGGGGCACCACTTTaGCCCACTTTAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPPGAPL*PTLEDL
Trigger: GAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CAA 72 bp GCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGSRWQGWCVCT*VPTVVELDQLS
Trigger: TGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
3UTR CAA 72 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGTTGTAGAGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVC*HIGTNSCRAGP
Trigger: TGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACCAGCCGTCTTTACTCTaGCTGCAAACGCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNQPSLL*LQTPSI
Trigger: GATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCTG...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTCCCCTCAATGCAGGTaGGGTGGGACCAGCAAGGTA +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRSPQCR*GGTSKV
Trigger: TACCTTGCTGGTCCCACCTCACCTGCATTGAGGGGA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTTGCTGGCCTCTTCCTaGGCCCCCATCGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRLLASS*APIEIP
Trigger: TGGAATCTCGATGGGGGCTCAGGAAGAGGCCAGCAA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGCAGCTCAGGGGTTCATaGTGCGGCAGCCGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRQLRGS*CGSRLY
Trigger: GTAAAGACGGCTGCCGCAGCATGAACCCCTGAGCTG...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCCGGAAGCCTCCTCTTaGACACACCTCCTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSPEASS*THLLAL
Trigger: CAAAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGACCGTGTTCTCTGCCTaGCACCTGCTTTCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRTVFSA*HLLSPE
Trigger: CTCTGGGGAAAGCAGGTGGCAGGCAGAGAACACGGT...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACTCCTGGGCTCTGTCTaGAATAAGCTGGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPLLGSV*NKLAGN
Trigger: ATTGCCTGCCAGCTTATTGCAGACAGAGCCCAGGAG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: SGSLESAGREPGVACLLELRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTCTCAGGGAGACCCCTaGGGAAGAGCATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRSQGDP*GRACLC
Trigger: GCAGAGACATGCTCTTCCCCAGGGGTCTCCCTGAGA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGCTTCAGGGTTCTTGCTaGCCTCTTCCTGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRLQGSC*PLPEPP
Trigger: TGGGGGCTCAGGAAGAGGCCAGCAAGAACCCTGAAG...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACAGCCGTCTTTACTCTaGCTGCAAACGCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPQPSLL*LQTPSI
Trigger: GATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCTG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHTPSSV*THAGYS
Trigger: ACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPRLYSD*KRLQSG
Trigger: ACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTTGCACACACCTCCTTaGTTTGCTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLHTPP*FAVARA
Trigger: AGCTCTGGCCACAGCAAAGCAAGGAGGTGTGTGCAA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGACCAGCTTTCACACTaGAGGGGTGTTAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPDQLSH*RGVKNV
Trigger: GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTATGGTGTTTCTGAGTaGTGGGTCCAGATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSYGVSE*WVQMAG
Trigger: CCCTGCCATCTGGACCCAGCACTCAGAAACACCATA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGGAAGAGCATGTCTCTaGTGTTCGAGCGCTCATAGC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSGRACL*CSSAHS
Trigger: GCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCA +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWPVRPS*DSYRNP
Trigger: TGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGG...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCTTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCTCCTTGCTTTGCTGTaGCCAGAGCTTAGGGAGATC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLLALL*PELREI
Trigger: GATCTCCCTAAGCTCTGGCCACAGCAAAGCAAGGAG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCAGCATGTGGTCAGTGTaGCCTATAGCAGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSMWSV*PIADPG
Trigger: CCCTGGATCTGCTATAGGCCACACTGACCACATGCT...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAGGATCCTGGTGTTACTaGTTGAGTTCCTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPGSWCY*LSSFLL
Trigger: CAGCAGGAAGGAACTCAACCAGTAACACCAGGATCC...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCTGTCTGCAATAAGCTaGCAGGCAATGAGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLSAIS*QAMSLR
Trigger: CCTGAGGCTCATTGCCTGCCAGCTTATTGCAGACAG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGAAAATCCCCAGATCTaGTACCAGCCCACACGCCAA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIENPQI*YQPTRQ
Trigger: TTGGCGTGTGGGCTGGTACCAGATCTGGGGATTTTC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCTGTTATTGCGCAGCTaGAGCTCAGTCAGATTCGTC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLLLRS*SSVRFV
Trigger: GACGAATCTGACTGAGCTTCAGCTGCGCAATAACAG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPTPSSV*THAGYS
Trigger: ACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGT...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCAATGGGTGTGTGAGTaGATTAGCGAATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSQWVCE*ISESRS
Trigger: GCTCCTGGATTCGCTAATTCACTCACACACCCATTG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCATTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCTGCCGTCTTTACTCTaGCTGCAAACGCCTTCAATC +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLPSLL*LQTPSI
Trigger: GATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCAG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535041.5
ENST00000643163.1
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGTAACCTGGAAAACTTaGACTGCCTTGGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVVTWKT*TALAAG
Trigger: ACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTAC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTTTTTGAGCTCCCGGTaGTACTTGGCCATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRFLSSR*YLAMRE
Trigger: CTCCCTCATGGCCAAGTACCACCGGGAGCTCAAAAA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGTCAATGCAGGTGAGGTaGGACCAGCAAGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRSMQVR*DQQGRK
Trigger: CTTCCTACCTTGCTGGTCCCACCTCACCTGCATTGA...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCTCCAGATGGCAGGGCTaGTGTGTTTGCACATTGGTA +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSISRWQG*CVCTLV
Trigger: TACCAATGTGCAAACACACCAGCCCTGCCATCTGGA...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGAATCCAGGAGCATGTaGTCAGTGTGGCCTATAGCA +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVESRSM*SVWPIA
Trigger: TGCTATAGGCCACACTGACCACATGCTCCTGGATTC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVTPSSV*THAGYS
Trigger: ACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR TCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTCCTGCTGTTGACTTaGGAAGATTGCAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVFLLLT*EDCSEH
Trigger: GTGCTCACTGCAATCTTCTCAAGTCAACAGCAGGAA...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCACGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGT +
Preference number: 4 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPRLYSD*KRLQSG
Trigger: ACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACG...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR GCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCAGGGCTGGTGTGTTTaGACATTGGTACCAACAGTT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVQGWCV*TLVPTV
Trigger: AACTGTTGGTACCAATGTGCAAACACACCAGCCCTG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCGTTCCAAAGATTTACTaGCCCAGACAGGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSVPKIY*PRQEHQ
Trigger: CTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAAC...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCACGCTCACATTTCAGTaGAAAAAGGCGCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVTLTFQ*KKAPVD
Trigger: ATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGATCTCAAAGGATCCTaGTGTTACTGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIDLKGS*CYWLSS
Trigger: GGAACTCAACCAGTAACACCAGGATCCTTTGAGATC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CCA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCTTAAGAACGTCTTTCTaGCTTAGGAGAGAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVLRTSF*LRRESQ
Trigger: CTGAGACTCTCTCCTAAGCCAGAAAGACGTTCTTAA...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp CGAGCCTGCCCCTCTGCCCAGGGCTGCTGCCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGGCCCTGTCGCTCTGGGGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: RACPSAQGCCPAPAW*GPRLSGPCRSGERG
Trigger: TCCTCTCTCCCCAGAGCGACAGGGCCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGGGCAGCAGCCCTGGGCAGAGGGGCAGGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543694.1
ENST00000543818.5
ENST00000544489.5
ENST00000546157.1
ENST00000546167.5
ENST00000642521.1
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
CDS CCA 90 bp GCCCATGGCTCGCCTCACGCTCGCCGGCCGGTGCCTCTGCTTCTGTaGGCAGGCTGTGCTGGGCTCCGGCTCCGGCTCAGCCCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: AHGSPHARRPVPLLL*AGCAGLRLRLSPGL
Trigger: AAGCCCGGGGCTGAGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGTGAGGCGAGCCATGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 90 bp ATCACCGTGCCCATGGCTCGCCTCACGCTCGCCGGCCGGTGCCTCTaGTTCTGTGGGCAGGCTGTGCTGGGCTCCGGCTCCGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ITVPMARLTLAGRCL*FCGQAVLGSGSGSA
Trigger: GGCTGAGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGTGAGGCGAGCCATGGGCACGGTGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 90 bp GCAATGATCACCGTGCCCATGGCTCGCCTCACGCTCGCCGGCCGGTaGCTCTGCTTCTGTGGGCAGGCTGTGCTGGGCTCCGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: AMITVPMARLTLAGR*LCFCGQAVLGSGSG
Trigger: GCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGCGAGCGTGAGGCGAGCCATGGGCACGGTGATCATTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTaGTCTCCCCGCCCTTCCTACCTGGCCGGGTGGGGATGGGCGCTC +
Preference number: 5 (lower is better)
Translates to: ASAGSRWELWLSNAV*SPRPSYLAGWGWAL
Trigger: GAGCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS TCA 90 bp GCAAGAGGGTTCGGGTGGCTGCGGGCACGTCTGGGGGCACCGTGGTaGGGCCAAGGCCACTGCAGTCCACCTCCAGGCTGCGGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: ARGFGWLRARLGAPW*GQGHCSPPPGCGCH
Trigger: GTGACAGCCGCAGCCTGGAGGTGGACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543694.1
ENST00000543818.5
ENST00000546157.1
ENST00000546167.5
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
ENST00000647164.1
CDS-3UTR CAA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCAGGAGGTGGACTGCTaGTGGCAGACGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPQEVDC*WQTGDG
Trigger: CCCGTCCCCCGTCTGCCACAAGCAGTCCACCTCCTG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACGGCTCTGGACTGGCCTaGGTGCAGGGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHGSGLA*VQGGPG
Trigger: TCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCC...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 90 bp AGCGGCCACCACCATCATGATGCAGACGACGCCGCACACGACCCCTaGAATGATCACCGTGCCCATGGCTCGCCTCACGCTCGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SGHHHHDADDAAHDP*NDHRAHGSPHARRP
Trigger: CGGCCGGCGAGCGTGAGGCGAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGCGTCGTCTGCATCATGATGGTGGTGGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp AGCGCACGCGTGTGCGCGAGCAGCGAGCCAGAGTGGAGCGGGGAGTaGCAGCTGGGGTGCATCTGTGATGACAGCGGCAGCAGCACACAC +
Preference number: 5 (lower is better)
Translates to: SARVCASSEPEWSGE*QLGCICDDSGSSTH
Trigger: GTGTGTGCTGCTGCCGCTGTCATCACAGATGCACCCCAGCTGTCACTCCCCGCTCCACTCTGGCTCGCTGCTCGCGCACACGCGTGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS CCA 90 bp GCGTGTGCGCGAGCAGCGAGCCAGAGTGGAGCGGGGAGTGACAGCTaGGGTGCATCTGTGATGACAGCGGCAGCAGCACACACAGGCGCA +
Preference number: 5 (lower is better)
Translates to: ACARAASQSGAGSDS*GASVMTAAAAHTGA
Trigger: TGCGCCTGTGTGTGCTGCTGCCGCTGTCATCACAGATGCACCCCAGCTGTCACTCCCCGCTCCACTCTGGCTCGCTGCTCGCGCACACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CAA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGGGTGATCCAGGAGACTaGCCTCCACTGCAGGGCGAG +
Preference number: 5 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGGDPGD*PPLQGE
Trigger: CTCGCCCTGCAGTGGAGGCAAGTCTCCTGGATCACC...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 90 bp GGCCAAGGCCACTGCAGTCCACCTCCAGGCTGCGGCTGTCACACTTaGAGGAGAAAGGGCAGGTGGGGAGGGCCTCCACAGCATACAGGG +
Preference number: 5 (lower is better)
Translates to: GQGHCSPPPGCGCHT*RRKGRWGGPPQHTG
Trigger: CCCTGTATGCTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACTGCAGTGGCCTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543694.1
ENST00000543818.5
ENST00000546157.1
ENST00000546167.5
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
ENST00000647164.1
CDS CCA 90 bp CTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTaGGGATGGGCGCTCAGGCCACAGAAGAGATCTGCTTCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: LSNAVCSPRPSYLAG*GWALRPQKRSASGP
Trigger: AGGACCAGAAGCAGATCTCTTCTGTGGCCTGAGCGCCCATCCCCACCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS CCA 90 bp GCACACCAGAGGCACCACGGCCGGCCGCGAGGGCAGCGCTCACCCTaGCCACGCTCACATTTCAGTGGAAAAAGGCGCCTGTGGATGAAT +
Preference number: 5 (lower is better)
Translates to: AHQRHHGRPRGQRSP*PRSHFSGKRRLWMN
Trigger: ATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTGGCCAGGGTGAGCGCTGCCCTCGCGGCCGGCCGTGGTGCCTCTGGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCAGGAGGTGGACTGCTaGTGGCAGACGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACQEVDC*WQTGDG
Trigger: CCCGTCCCCCGTCTGCCACAAGCAGTCCACCTCCTG...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGCTCTGGACTGGCCTaGGTGCAGGGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGSGLA*VQGGPG
Trigger: TCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGGCTCTGGACTGGCCTaGGTGCAGGGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: SGSLESAGREPGVACLLEGSGLA*VQGGPG
Trigger: TCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTTGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCACACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: SGSLESAGREPGVACLLEHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp GGCGGAGCAGCGGCGAGTGCCGCAGCAGGTCCCTGTCCAGGGTCCTaGTGCTGTTATTGCGCAGCTGAAGCTCAGTCAGATTCGTCAGGT +
Preference number: 5 (lower is better)
Translates to: GGAAASAAAGPCPGS*CCYCAAEAQSDSSG
Trigger: ACCTGACGAATCTGACTGAGCTTCAGCTGCGCAATAACAGCATCAGGACCCTGGACAGGGACCTGCTGCGGCACTCGCCGCTGCTCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTGGCGAAAGCCCAGCTaGGCAGGGCACTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLWRKPS*AGHSAY
Trigger: ATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGGCTCTGGACTGGCCTaGGTGCAGGGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPGSGLA*VQGGPG
Trigger: TCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGGGGCTGGCGCTTTTaGAGCTCCCGGTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRGWRF*SSRWYL
Trigger: CAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGGGGCTGGCGCTTTTaGAGCTCCCGGTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLRGWRF*SSRWYL
Trigger: CAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 5 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCATGGCGAAAGCCCAGCTaGGCAGGGCACTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPWRKPS*AGHSAY
Trigger: ATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCA...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGCCGGTCCAGGAAGTaGTTGGACAGGTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLSRSRK*LDRSNR
Trigger: GCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCAAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGCCACCACTCCATCCAGTGTTaGAACTCACGCAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: RLPTHSLVWPRLGALGSHHSIQC*NSRRLQ
Trigger: CTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTG...GTGGCTCCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCACTCCATCCAGTGTTaGAACTCACGCAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPHSIQC*NSRRLQ
Trigger: CTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTG...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTAGGGGCTGGCGCTTTTaGAGCTCCCGGTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLRGWRF*SSRWYL
Trigger: CAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCT...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 90 bp AGCTGCAGGTTTGCTAGGGGTTCAAATGTCAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGCGAGAGGGAGCGCAGAGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SCRFARGSNVSRSRF*RRLERSERERRARS
Trigger: GCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACCCCTAGCAAACCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACAGGAGGTGGACTGCTaGTGGCAGACGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPQEVDC*WQTGDG
Trigger: CCCGTCCCCCGTCTGCCACAAGCAGTCCACCTCCTG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAGACAGGCTCCCCACCCACTCTCTGGTTTGGCCCCGGCTGGGTGCTCTAGGGAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PDRLPTHSLVWPRLGALGRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...CCCTAGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTGGGGAGCCTGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTGGCGAAAGCCCAGCTaGGCAGGGCACTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACWRKPS*AGHSAY
Trigger: ATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCAGGCTCTGGACTGGCCTaGGTGCAGGGTGGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPGSGLA*VQGGPG
Trigger: TCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCC...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAGGGGCTGGCGCTTTTaGAGCTCCCGGTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTRGWRF*SSRWYL
Trigger: CAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTTGCTTCCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ATGECPVRKPPLAHTSLLPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...AAGCAAGGAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGCTAAAGATACCACCATaGACAATGCCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLLKIPP*TMPSPP
Trigger: GGGAGGGGAGGGCATTGTCAATGGTGGTATCTTTAG...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp CACCCTGGCCACGCTCACATTTCAGTGGAAAAAGGCGCCTGTGGATaGATCGCTGCCGACCACAGGGAGGAGGAAAGCGGTTTCACCACC +
Preference number: 5 (lower is better)
Translates to: HPGHAHISVEKGACG*IAADHREEESGFTT
Trigger: GGTGGTGAAACCGCTTTCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTGGCCAGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS CCA 90 bp CAGGTCCAACCGCTGCAGGCTGGAGAGGTTGGCGAAAGCCCAGCTTaGCAGGGCACTCAGCTTATTGTTCAAGAGCAAGAGGGTTCGGGT +
Preference number: 5 (lower is better)
Translates to: QVQPLQAGEVGESPA*QGTQLIVQEQEGSG
Trigger: ACCCGAACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
ENST00000647164.1
CDS CCA 90 bp TTGCTAGGGGTTCAAATGTCAGCCGGTCCAGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGCGCAGAGCCAGGAGCCCGTCGAAAA +
Preference number: 5 (lower is better)
Translates to: LLGVQMSAGPDSADG*SEARGSAEPGARRK
Trigger: TTTTCGACGGGCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACCCCTAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 90 bp CGCTCACCCTGGCCACGCTCACATTTCAGTGGAAAAAGGCGCCTGTaGATGAATCGCTGCCGACCACAGGGAGGAGGAAAGCGGTTTCAC +
Preference number: 5 (lower is better)
Translates to: RSPWPRSHFSGKRRL*MNRCRPQGGGKRFH
Trigger: GTGAAACCGCTTTCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTGGCCAGGGTGAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CAA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCCAGGAGGTGGACTGCTaGTGGCAGACGGGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVQEVDC*WQTGDG
Trigger: CCCGTCCCCCGTCTGCCACAAGCAGTCCACCTCCTG...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACTGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCGCAGCAGCTGCAGGTTaGCTAGGGGTTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLAAAAG*LGVQMS
Trigger: TGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGC...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGCAGCAGCTGCAGGTTaGCTAGGGGTTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPAAAAG*LGVQMS
Trigger: TGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGC...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTGGCCGGGTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ELWLSNAVCSPRPSYLAGWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...CCCGGCCAGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCCAGCGCCGGGTCAAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ASAGSRWELWLSNAVCSPWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...GGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTTGACCCGGCGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGCCTCTTCCTGAGCCCCCATCGAGATTCCATCCCAGAGCCAGGGACGAGCCTGTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GLFLSPHRDSIPEPGTSLSWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...CAGGCTCGTCCCTGGCTCTGGGATGGAATCTCGATGGGGGCTCAGGAAGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: PGKLALPWQQVALSQTGSSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCATCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAATCCCCAGATCTGGTACCAGCCCACACGCCAAAAGAAGGAAGACTGTGGCCACACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: KSPDLVPAHTPKEGRLWPHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...TGGCCACAGTCTTCCTTCTTTTGGCGTGTGGGCTGGTACCAGATCTGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: PGKLALPWQQVALSQTGSKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SGSLESAGREPGVACLLEKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGSLESAGREPGVACLLEGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCCTAAAGATACCACCATaGACAATGCCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLLKIPP*TMPSPP
Trigger: GGGAGGGGAGGGCATTGTCAATGGTGGTATCTTTAG...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCATGCAGGCTGGAGAGGTaGGCGAAAGCCCAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPCRLER*AKAQLG
Trigger: GCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCA...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGCCGGTCCAGGAAGTaGTTGGACAGGTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSRSRK*LDRSNR
Trigger: GCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACAGCCGGTCCAGGAAGTaGTTGGACAGGTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNSRSRK*LDRSNR
Trigger: GCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCT...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GAGAGGGTTACCATGGTGACAGGAGGGCTCCTCCAGGGGCACCACTTTGGCCCACACTCCATCCAGTGTTaGAACTCACGCAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: ERVTMVTGGLLQGHHFGPHSIQC*NSRRLQ
Trigger: CTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTG...TGGGCCAAAGTGGTGCCCCTGGAGGAGCCCTCCTGTCACCATGGTAACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CACAGGCCAGGAGTACTGAAGATGGAGGGCGAGAGGCACAGAGTCACGGTGCCAGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 5 (lower is better)
Translates to: HRPGVLKMEGERHRVTVPAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...TGGCACCGTGACTCTGTGCCTCTCGCCCTCCATCTTCAGTACTCCTGGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLSWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCACCCACTCTCTGGTTaGGCCCCGGCTGGGTGCTCT +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSHPLSG*APAGCS
Trigger: AGAGCACCCAGCCGGGGCCAAACCAGAGAGTGGGTG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCCCTCTGCTCAGACCCTaGGCTTCAGGGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPPLLRP*ASGFLL
Trigger: CAGCAAGAACCCTGAAGCCAAGGGTCTGAGCAGAGG...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 90 bp CCACGCTCACATTTCAGTGGAAAAAGGCGCCTGTGGATGAATCGCTaGCGACCACAGGGAGGAGGAAAGCGGTTTCACCACCACCTCCAT +
Preference number: 5 (lower is better)
Translates to: PRSHFSGKRRLWMNR*RPQGGGKRFHHHLH
Trigger: ATGGAGGTGGTGGTGAAACCGCTTTCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS-3UTR CAA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AGGAAGGGCGACAGGGGAATGCCCAGTCCGGAAGCCTCCTCTTGCACACACCTCAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RKGDRGMPSPEASSCTHLRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...GAGGTGTGTGCAAGAGGAGGCTTCCGGACTGGGCATTCCCCTGTCGCCCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGCCGGTCCAGGAAGTaGTTGGACAGGTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPSRSRK*LDRSNR
Trigger: GCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCACTCCATCCAGTGTTaGAACTCACGCAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACHSIQC*NSRRLQ
Trigger: CTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTG...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGAGAACCCGGTGTGGCTaGTCTGCTGGAGGGCGGGGA +
Preference number: 5 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRRTRCG*SAGGRG
Trigger: TCCCCGCCCTCCAGCAGACAAGCCACACCGGGTTCT...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTCTGCTGGAGTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: SGSLESAGREPGVACLLESWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...CTCCAGCAGACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACSWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGAAAACTTGCACTGCCTaGGCAGCAGGTGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWKTCTA*AAGGSV
Trigger: GACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTT...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp CCTGGTCTCCCATCTGGGCATTCCTTGAGTTATGGGTGGAGAAACTaGGGTCATCTCTCCGAGGTGAGCAGAGTGAGGTCACAGGCCACA +
Preference number: 5 (lower is better)
Translates to: PGLPSGHSLSYGWRN*GHLSEVSRVRSQAT
Trigger: TGTGGCCTGTGACCTCACTCTGCTCACCTCGGAGAGATGACCTCAGTTTCTCCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 90 bp AACGCCTTCAATCAGGTGGCTCTCAACCCTCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCAGACACCACCGGCAGGCAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: NAFNQVALNPPVRPS*DSYRNPDTTGRQSA
Trigger: TGCGCTCTGCCTGCCGGTGGTGTCTGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGGAGGGTTGAGAGCCACCTGATTGAAGGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000539859.1
ENST00000540378.1
ENST00000542529.5
ENST00000543730.1
ENST00000543818.5
ENST00000544489.5
ENST00000545157.1
ENST00000642521.1
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
ENST00000646885.1
ENST00000646982.1
ENST00000647164.1
ENST00000647440.1
CDS-3UTR CAA 90 bp CCTGGAAAACTTGCACTGCCTTGGCAGCAGGTGGCTCTGTCCCAGACAGGCTCCAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: PGKLALPWQQVALSQTGSRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...GGAGCCTGTCTGGGACAGAGCCACCTGCTGCCAAGGCAGTGCAAGTTTTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CGGTGGCTTTCAGGGAGCCTCGAAAGTGCAGGGAGAGAACCCGGTGTGGCTTGTAGGGCACTCAGCTTATaGTTCAAGAGCAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: RWLSGSLESAGREPGVACRALSL*FKSKRV
Trigger: AACCCTCTTGCTCTTGAACAATAAGCTGAGTGCCCT...ACAAGCCACACCGGGTTCTCTCCCTGCACTTTCGAGGCTCCCTGAAAGCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCAGCCGGTCCAGGAAGTaGTTGGACAGGTCCAACCGC +
Preference number: 5 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVSRSRK*LDRSNR
Trigger: GCGGTTGGACCTGTCCAACAACTTCCTGGACCGGCT...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TTTCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: FLSAGSRWQGWCVCTLVPRFCRR*ERSERE
Trigger: CTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCT...TGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCAGCAGCTGCAGGTTaGCTAGGGGTTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAAAAG*LGVQMS
Trigger: TGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCAGCAGCTGCAGGTTaGCTAGGGGTTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPAAAAG*LGVQMS
Trigger: TGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp AAGGTGGGAGCTGTGGCTGAGCAATGCCGTGTGCTCTCCCCGCCCTTCCTACCTTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: KVGAVAEQCRVLSPPFLPWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...AGGTAGGAAGGGCGGGGAGAGCACACGGCATTGCTCAGCCACAGCTCCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GCTCCTCCAGGGGCACCACTTTGGCCCACTTTAGAGGATCTCAAAGGATCCTGGGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 5 (lower is better)
Translates to: APPGAPLWPTLEDLKGSWAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...CCAGGATCCTTTGAGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GGAAGAGCATGTCTCTGCTGTTCGAGCGCTCATAGCCTCGGTCTCCGTGTGACCTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: GRACLCCSSAHSLGLRVTSWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...GGTCACACGGAGACCGAGGCTATGAGCGCTCGAACAGCAGAGACATGCTCTTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTGGCGAAAGCCCAGCTaGGCAGGGCACTCAGCTTAT +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSWRKPS*AGHSAY
Trigger: ATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TCTGAGTGCTGGGTCCAGATGGCAGGGCTGGTGTGTTTGCACATTGGTACCAACGCAGCAGCTGCAGGTTaGCTAGGGGTTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: SECWVQMAGLVCLHIGTNAAAAG*LGVQMS
Trigger: TGACATTTGAACCCCTAGCAAACCTGCAGCTGCTGC...GTTGGTACCAATGTGCAAACACACCAGCCCTGCCATCTGGACCCAGCACTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp GTTTGCACATTGGTACCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGAGGGGCTGGCGCTTTTaGAGCTCCCGGTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: VCTLVPTVVELDQLSHCRRGWRF*SSRWYL
Trigger: CAAGTACCACCGGGAGCTCAAAAAGCGCCAGCCCCT...CCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGGTACCAATGTGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACGCAGGGCTGGTGTGTTaGCACATTGGTACCAACAGT +
Preference number: 5 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHAGLVC*HIGTNS
Trigger: ACTGTTGGTACCAATGTGCAAACACACCAGCCCTGC...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTGATGCCTCCTGAGCCTGTGAGCATGACACCTAGGTACCCACCATCTTCACACCTAAAGATACCACCATaGACAATGCCCTCCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LMPPEPVSMTPRYPPSSHLKIPP*TMPSPP
Trigger: GGGAGGGGAGGGCATTGTCAATGGTGGTATCTTTAG...GTGTGAAGATGGTGGGTACCTAGGTGTCATGCTCACAGGCTCAGGAGGCATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299194.6
ENST00000543818.5
ENST00000643383.1
ENST00000646030.2
CDS TCA 90 bp GTCAGTCCCAGCCTCATCTGCCTTCTTGTTGCCTCCCGAGTATGTTaGTCACTCAGATGTTTTCATGGCAACCTGGTCTCCCATCTGGGC +
Preference number: 5 (lower is better)
Translates to: VSPSLICLLVASRVC*SLRCFHGNLVSHLG
Trigger: GCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGGCAGATGAGGCTGGGACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 90 bp CCTTCTTGTTGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATaGCAACCTGGTCTCCCATCTGGGCATTCCTGGGTCCCGGTTCCT +
Preference number: 5 (lower is better)
Translates to: PSCCLPSMLITQMFS*QPGLPSGHSWVPVP
Trigger: AGGAACCGGGACCCAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539859.1
ENST00000646885.1
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTCCAGGGGCACCACTTaGGCCCACTTTAGAGGATCT +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSRGTT*AHFRGS
Trigger: AGATCCTCTAAAGTGGGCCAAAGTGGTGCCCCTGGA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CTTAGGGAGATCCCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LREIPHMFQRFTGPDRSIGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...GATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGGGATCTCCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp CCAACAGTTGTAGAGCTGGACCAGCTTTCACACTGCAGGGGTGTTAAGAACGTCGGTAACCTGGAAAACTaGCACTGCCTTGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: PTVVELDQLSHCRGVKNVGNLEN*HCLGSR
Trigger: CCTGCTGCCAAGGCAGTGCAAGTTTTCCAGGTTACC...GACGTTCTTAACACCCCTGCAGTGTGAAAGCTGGTCCAGCTCTACAACTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 90 bp GTTTTCATGGCAACCTGGTCTCCCATCTGGGCATTCCTTGAGTTATaGGTGGAGAAACTGAGGTCATCTCTCCGAGGTGAGCAGAGTGAG +
Preference number: 5 (lower is better)
Translates to: VFMATWSPIWAFLEL*VEKLRSSLRGEQSE
Trigger: CTCACTCTGCTCACCTCGGAGAGATGACCTCAGTTTCTCCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS-3UTR CAA 90 bp CCCCACATGTTCCAAAGATTTACTGGCCCAGACAGGAGCATCAGCAGGAGCCCCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: PHMFQRFTGPDRSISRSPWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...GGGGCTCCTGCTGATGCTCCTGTCTGGGCCAGTAAATCTTTGGAACATGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCCACTCCATCCAGTGTTaGAACTCACGCAGGTTACAG +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSHSIQC*NSRRLQ
Trigger: CTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTG...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTCCTGGTGTTACTGGTaGAGTTCCTTCCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSSWCYW*SSFLLL
Trigger: CAACAGCAGGAAGGAACTCAACCAGTAACACCAGGA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 90 bp CCTTCTTGTTGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATaGCAACCTGGTCTCCCATCTGGGCATTCCTTGAGTTATGGGTGG +
Preference number: 5 (lower is better)
Translates to: PSCCLPSMLITQMFS*QPGLPSGHSLSYGW
Trigger: CCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 90 bp TTGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATGGCAACCTaGTCTCCCATCTGGGCATTCCTTGAGTTATGGGTGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: LPPEYVDHSDVFMAT*SPIWAFLELWVEKL
Trigger: CAGTTTCTCCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS-3UTR CAA 90 bp TGGCTTAGGAGAGAGTCTCAGAAATCTACCTTCATCCCTCAGATCCCTCCCTCCTGGTGTGTTTGCACATaGGTACCAACAGTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: WLRRESQKSTFIPQIPPSWCVCT*VPTVVE
Trigger: CTCTACAACTGTTGGTACCAATGTGCAAACACACCA...GGAGGGAGGGATCTGAGGGATGAAGGTAGATTTCTGAGACTCTCTCCTAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 90 bp TATGTTGATCACTCAGATGTTTTCATGGCAACCTGGTCTCCCATCTaGGCATTCCTTGAGTTATGGGTGGAGAAACTGAGGTCATCTCTC +
Preference number: 5 (lower is better)
Translates to: YVDHSDVFMATWSPI*AFLELWVEKLRSSL
Trigger: GAGAGATGACCTCAGTTTCTCCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS TCA 72 bp CCCTCTGCCCAGGGCTGCTGCCCGGCGCCAGCATGGTaGGGCCCACGGCTCTCCGGGCCCTGTCGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PSAQGCCPAPAW*GPRLSGPCRSG
Trigger: CCCAGAGCGACAGGGCCCGGAGAGCCGTGGGCCTCACCATGCTGGCGCCGGGCAGCAGCCCTGGGCAGAGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543694.1
ENST00000543818.5
ENST00000544489.5
ENST00000546157.1
ENST00000546167.5
ENST00000642521.1
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
CDS GCA 72 bp TCGCCGGCCGGTGCCTCTGCTTCTGTGGGCAGGCTGTaGTGGGCTCCGGCTCCGGCTCAGCCCCGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: SPAGASASVGRL*WAPAPAQPRAW
Trigger: CCAAGCCCGGGGCTGAGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACAGAAGCAGAGGCACCGGCCGGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 72 bp GGGCCCTGTCGCTCTGGGGAGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCATGGCCCGAGGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GPCRSGERGAPG*AACQSMARGRQ
Trigger: CTGCCTCCCTCGGGCCATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543694.1
ENST00000546167.5
ENST00000643163.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
CDS CCA 72 bp CTCCGGGCCCTGTCGCTCTGGGGAGAGAGGAGCCCCTaGGTGCGCCGCCTGTCAGTCCATGGCCCGAGGGAG +
Preference number: 6 (lower is better)
Translates to: LRALSLWGERSP*VRRLSVHGPRE
Trigger: CTCCCTCGGGCCATGGACTGACAGGCGGCGCACCCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543694.1
ENST00000546167.5
ENST00000643163.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
CDS CCA 72 bp CTCCGGGCCCTGTCGCTCTGGGGAGAGAGGAGCCCCTaGGTGCGCCGCCTGTCAGTCCTGGGTCCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: LRALSLWGERSP*VRRLSVLGPGS
Trigger: GGAACCGGGACCCAGGACTGACAGGCGGCGCACCCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000543818.5
ENST00000544489.5
ENST00000642521.1
ENST00000643383.1
CDS CAA 90 bp TGTGGGCAGGCTGTGCTGGGCTCCGGCTCCGGCTCAGCCCCGGGCTaGGGCTTAGCAGGCTCTGGACTGGCCTTGGTGCAGGGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: CGQAVLGSGSGSAPG*GLAGSGLALVQGGP
Trigger: TGGGCCACCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCCAAGCCCGGGGCTGAGCCGGAGCCGGAGCCCAGCACAGCCTGCCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS CCA 72 bp GGCAACTGGGCCAGGCCGTTGATGGACAGGTCCAGGTaGCGGAGCAGCGGCGAGTGCCGCAGCAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GNWARPLMDRSR*RSSGECRSRSL
Trigger: CAGGGACCTGCTGCGGCACTCGCCGCTGCTCCGCCACCTGGACCTGTCCATCAACGGCCTGGCCCAGTTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 72 bp CGGGTGGGGATGGGCGCTCAGGCCACAGAAGAGATCTaGTTCTGGTCCTCGTGCTCGCCCTCGGGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: RVGMGAQATEEI*FWSSCSPSGSP
Trigger: GGGGGACCCCGAGGGCGAGCACGAGGACCAGAAGCAGATCTCTTCTGTGGCCTGAGCGCCCATCCCCACCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 72 bp GGGCCCTGTCGCTCTGGGGAGAGAGGAGCCCCTGGGTaGGCCGCCTGTCAGTCCCAGCCTCATCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: GPCRSGERGAPG*AACQSQPHLPS
Trigger: AGAAGGCAGATGAGGCTGGGACTGACAGGCGGCGCACCCAGGGGCTCCTCTCTCCCCAGAGCGACAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 72 bp CAAGAGCAAGAGGGTTCGGGTGGCTGCGGGCACGTCTaGGGGCACCGTGGTGAGGCCAAGGCCACTGCAGTC +
Preference number: 6 (lower is better)
Translates to: QEQEGSGGCGHV*GHRGEAKATAV
Trigger: GACTGCAGTGGCCTTGGCCTCACCACGGTGCCCCCAGACGTGCCCGCAGCCACCCGAACCCTCTTGCTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543694.1
ENST00000543818.5
ENST00000546157.1
ENST00000546167.5
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
ENST00000647164.1
CDS CCA 72 bp AGGCACCACGGCCGGCCGCGAGGGCAGCGCTCACCCTaGCCACGCTCACATTTCAGTGGAAAAAGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: RHHGRPRGQRSP*PRSHFSGKRRL
Trigger: CAGGCGCCTTTTTCCACTGAAATGTGAGCGTGGCCAGGGTGAGCGCTGCCCTCGCGGCCGGCCGTGGTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS GCA 72 bp TCCGCATGTCCTTCCCCCTCAGCTCCTTGGGCAGGGTaGAGGCAAGCTGGTCCAAGCGTCCCCCTCGGTAGG +
Preference number: 6 (lower is better)
Translates to: SACPSPSAPWAG*RQAGPSVPLGR
Trigger: CCTACCGAGGGGGACGCTTGGACCAGCTTGCCTGCACCCTGCCCAAGGAGCTGAGGGGGAAGGACATGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 72 bp CTCCGGCTCAGCCCCGGGCTTGGGCTTAGCAGGCTCTaGACTGGCCTTGGTGCAGGGTGGCCCAGGAATATC +
Preference number: 6 (lower is better)
Translates to: LRLSPGLGLSRL*TGLGAGWPRNI
Trigger: GATATTCCTGGGCCACCCTGCACCAAGGCCAGTCCAGAGCCTGCTAAGCCCAAGCCCGGGGCTGAGCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS TCA 72 bp CTGCTTCCCCCTGCACCACCGACGCCCACGCAGAGGTaGATAGCAGCACTCTGTCTTCCGCCAGCCGGGCTA +
Preference number: 6 (lower is better)
Translates to: LLPPAPPTPTQR*IAALCLPPAGL
Trigger: TAGCCCGGCTGGCGGAAGACAGAGTGCTGCTATTCACCTCTGCGTGGGCGTCGGTGGTGCAGGGGGAAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000539859.1
ENST00000542529.5
ENST00000543694.1
ENST00000543818.5
ENST00000544489.5
ENST00000545157.1
ENST00000546167.5
ENST00000642521.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
ENST00000646885.1
ENST00000646982.1
ENST00000647440.1
CDS GCA 72 bp CACTGCAGTCCACCTCCAGGCTGCGGCTGTCACACTTaGAGGAGAAAGGGCAGGTGGGGAGGGCCTCCACAG +
Preference number: 6 (lower is better)
Translates to: HCSPPPGCGCHT*RRKGRWGGPPQ
Trigger: CTGTGGAGGCCCTCCCCACCTGCCCTTTCTCCTGCAAGTGTGACAGCCGCAGCCTGGAGGTGGACTGCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543694.1
ENST00000543818.5
ENST00000546157.1
ENST00000546167.5
ENST00000642918.1
ENST00000643163.1
ENST00000643383.1
ENST00000643914.1
ENST00000644226.1
ENST00000646030.2
ENST00000647164.1
CDS CCA 72 bp CGAGCAGCGAGCCAGAGTGGAGCGGGGAGTGACAGCTaGGGTGCATCTGTGATGACAGCGGCAGCAGCACAC +
Preference number: 6 (lower is better)
Translates to: RAASQSGAGSDS*GASVMTAAAAH
Trigger: GTGTGCTGCTGCCGCTGTCATCACAGATGCACCCCAGCTGTCACTCCCCGCTCCACTCTGGCTCGCTGCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS GCA 72 bp CACCATCATGATGCAGACGACGCCGCACACGACCCCTaGAATGATCACCGTGCCCATGGCTCGCCTCACGCT +
Preference number: 6 (lower is better)
Translates to: HHHDADDAAHDP*NDHRAHGSPHA
Trigger: AGCGTGAGGCGAGCCATGGGCACGGTGATCATTGCAGGGGTCGTGTGCGGCGTCGTCTGCATCATGATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543730.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
CDS GCA 72 bp GGAGGTGGACTGCTTGTGGCAGACGGGGGACGGGGCTaGTGGGTCAGTCACAAACTGAGAAGGAAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GGGLLVADGGRG*WVSHKLRRKER
Trigger: CCTCTCTTTCCTTCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTCTGCCACAAGCAGTCCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000299194.6
ENST00000542529.5
ENST00000543730.1
ENST00000543818.5
ENST00000545157.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
ENST00000646982.1
ENST00000647440.1
CDS CCA 72 bp GTTCAAATGTCAGCCGGTCCAGATTCTGCAGACGGTTaGAGCGAAGCGAGAGGGAGCGCAGAGCCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: VQMSAGPDSADG*SEARGSAEPGA
Trigger: GGCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS CCA 72 bp AGGGCAGCGCTCACCCTGGCCACGCTCACATTTCAGTaGAAAAAGGCGCCTGTGGATGAATCGCTGCCGACC +
Preference number: 6 (lower is better)
Translates to: RAALTLATLTFQ*KKAPVDESLPT
Trigger: GGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTGGCCAGGGTGAGCGCTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS CAA 72 bp GGTTCAAATGTCAGCCGGTCCAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAGCGCAGAGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GSNVSRSRFCRR*ERSERERRARS
Trigger: GCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 72 bp CAGACGGGGGACGGGGCTGCTGGGTCAGTCACAAACTaGGAAGGAAAGAGAGGGATGGAGGGAGAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: QTGDGAAGSVTN*EGKRGMEGERE
Trigger: CTCTCTCTCTCCCTCCATCCCTCTCTTTCCTTCTCAGTTTGTGACTGACCCAGCAGCCCCGTCCCCCGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000542529.5
ENST00000543730.1
ENST00000543818.5
ENST00000545157.1
ENST00000643383.1
ENST00000643791.1
ENST00000646982.1
ENST00000647440.1
CDS CCA 72 bp TGTTGGACAGGTCCAACCGCTGCAGGCTGGAGAGGTTaGCGAAAGCCCAGCTTGGCAGGGCACTCAGCTTAT +
Preference number: 6 (lower is better)
Translates to: CWTGPTAAGWRG*RKPSLAGHSAY
Trigger: ATAAGCTGAGTGCCCTGCCAAGCTGGGCTTTCGCCAACCTCTCCAGCCTGCAGCGGTTGGACCTGTCCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000540378.1
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
ENST00000647164.1
CDS CAA 90 bp TTTGCTAGGGGTTCAAATGTCAGCCGGTCCAGATTCTGCAGACGGTaGGAGCGAAGCGAGAGGGAGCGCAGAGCCAGGAGCCCGTCGAAA +
Preference number: 6 (lower is better)
Translates to: FARGSNVSRSRFCRR*ERSERERRARSPSK
Trigger: TTTCGACGGGCTCCTGGCTCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACCCCTAGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 72 bp GTCCCCCTCGGTAGGAGAACCACTCCATCCAGTGTTTaGACTCACGCAGGTTACAGTCACACTCCCAGGGGT +
Preference number: 6 (lower is better)
Translates to: VPLGRRTTPSSV*THAGYSHTPRG
Trigger: ACCCCTGGGAGTGTGACTGTAACCTGCGTGAGTTCAAACACTGGATGGAGTGGTTCTCCTACCGAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS TCA 72 bp CACGCTCACATTTCAGTGGAAAAAGGCGCCTGTGGATaGATCGCTGCCGACCACAGGGAGGAGGAAAGCGGT +
Preference number: 6 (lower is better)
Translates to: HAHISVEKGACG*IAADHREEESG
Trigger: ACCGCTTTCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATGTGAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS GCA 72 bp AGGGGTTCATGCTGCGGCAGCCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGTGGCTCTCAACCCTCC +
Preference number: 6 (lower is better)
Translates to: RGSCCGSRLYSD*KRLQSGGSQPS
Trigger: GGAGGGTTGAGAGCCACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCTGCCGCAGCATGAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000299194.6
ENST00000539859.1
ENST00000542529.5
ENST00000543818.5
ENST00000544489.5
ENST00000642521.1
ENST00000643383.1
ENST00000646030.2
ENST00000646885.1
ENST00000646982.1
CDS GCA 72 bp TTTGCTAGGGGTTCAAATGTCAGCCGGTCCAGATTCTaGAGACGGTTGGAGCGAAGCGAGAGGGAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: FARGSNVSRSRF*RRLERSERERR
Trigger: TCTGCGCTCCCTCTCGCTTCGCTCCAACCGTCTGCAGAATCTGGACCGGCTGACATTTGAACCCCTAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000543818.5
ENST00000643163.1
ENST00000643383.1
ENST00000646030.2
CDS GCA 72 bp GGCGATCCAGCAGGTGATCCCCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGTGGCTCTCAACCCTCC +
Preference number: 6 (lower is better)
Translates to: GDPAGDPRLYSD*KRLQSGGSQPS
Trigger: GGAGGGTTGAGAGCCACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGGGATCACCTGCTGGATCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540378.1
ENST00000647164.1
CDS GCA 72 bp GGTTCATGCTGCGGCAGCTGCCGTCTTTACTCTGACTaGAAACGCCTTCAATCAGGTGGCTCTCAACCCTCC +
Preference number: 6 (lower is better)
Translates to: GSCCGSCRLYSD*KRLQSGGSQPS
Trigger: GGAGGGTTGAGAGCCACCTGATTGAAGGCGTTTGCAGTCAGAGTAAAGACGGCAGCTGCCGCAGCATGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535041.5
ENST00000545157.1
ENST00000643163.1
ENST00000647440.1
CDS GCA 72 bp CATTTCAGTGGAAAAAGGCGCCTGTGGATGAATCGCTaGCGACCACAGGGAGGAGGAAAGCGGTTTCACCAC +
Preference number: 6 (lower is better)
Translates to: HFSGKRRLWMNR*RPQGGGKRFHH
Trigger: GTGGTGAAACCGCTTTCCTCCTCCCTGTGGTCGGCAGCGATTCATCCACAGGCGCCTTTTTCCACTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000543818.5
ENST00000643383.1
CDS CCA 72 bp AATCAGGTGGCTCTCAACCCTCCAGTAAGACCCTCCTaGGATTCCTATAGAAATCCAGACACCACCGGCAGG +
Preference number: 6 (lower is better)
Translates to: NQVALNPPVRPS*DSYRNPDTTGR
Trigger: CCTGCCGGTGGTGTCTGGATTTCTATAGGAATCCCAGGAGGGTCTTACTGGAGGGTTGAGAGCCACCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000299194.6
ENST00000535041.5
ENST00000539859.1
ENST00000540378.1
ENST00000542529.5
ENST00000543730.1
ENST00000543818.5
ENST00000544489.5
ENST00000545157.1
ENST00000642521.1
ENST00000643163.1
ENST00000643383.1
ENST00000643791.1
ENST00000646030.2
ENST00000646885.1
ENST00000646982.1
ENST00000647164.1
ENST00000647440.1
CDS CAA 72 bp CGCCGCCTGTCAGTCCCAGCCTCATCTGCCTTCTTGTaGCCTCCCGAGTATGTTGATCACTCAGATGTTTTC +
Preference number: 6 (lower is better)
Translates to: RRLSVPASSAFL*PPEYVDHSDVF
Trigger: GAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGGCAGATGAGGCTGGGACTGACAGGCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS GCA 72 bp CCGGGCTATAATAAGACTCATCAGCTCAGGGGTTCATaGTGCGGCAGCTGCCGTCTTTACTCTGACTGCAAA +
Preference number: 6 (lower is better)
Translates to: PGYNKTHQLRGS*CGSCRLYSDCK
Trigger: TTTGCAGTCAGAGTAAAGACGGCAGCTGCCGCAGCATGAACCCCTGAGCTGATGAGTCTTATTATAGCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535041.5
ENST00000545157.1
ENST00000643163.1
ENST00000647440.1
CDS CCA 72 bp GAGTATGTTGATCACTCAGATGTTTTCATGGCAACCTaGTCTCCCATCTGGGCATTCCTGGGTCCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: EYVDHSDVFMAT*SPIWAFLGPGS
Trigger: GGAACCGGGACCCAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539859.1
ENST00000646885.1
CDS CCA 72 bp TGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATaGCAACCTGGTCTCCCATCTGGGCATTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: CLPSMLITQMFS*QPGLPSGHSWV
Trigger: GACCCAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539859.1
ENST00000646885.1
CDS CCA 72 bp CTGGGTCAGTCACAAACTGAGAAGGAAAGAGAGGGATaGAGGGAGAGAGAGAGAGGAGAGAGGGAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: LGQSQTEKEREG*RERERGEREER
Trigger: CCTTTCTTCCCTCTCTCCTCTCTCTCTCTCCCTCCATCCCTCTCTTTCCTTCTCAGTTTGTGACTGACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000542529.5
ENST00000543730.1
ENST00000543818.5
ENST00000545157.1
ENST00000643383.1
ENST00000643791.1
ENST00000646982.1
ENST00000647440.1
CDS CCA 72 bp GAGTATGTTGATCACTCAGATGTTTTCATGGCAACCTaGTCTCCCATCTGGGCATTCCATGGCCCGAGGGAG +
Preference number: 6 (lower is better)
Translates to: EYVDHSDVFMAT*SPIWAFHGPRE
Trigger: CTCCCTCGGGCCATGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542529.5
ENST00000646982.1
CDS CCA 72 bp TGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATaGCAACCTGGTCTCCCATCTGGGCATTCCATGGCC +
Preference number: 6 (lower is better)
Translates to: CLPSMLITQMFS*QPGLPSGHSMA
Trigger: GGCCATGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542529.5
ENST00000646982.1
CDS CAA 90 bp TGTCAGTCCCAGCCTCATCTGCCTTCTTGTTGCCTCCCGAGTATGTaGATCACTCAGATGTTTTCATGGCAACCTGGTCTCCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: CQSQPHLPSCCLPSM*ITQMFSWQPGLPSG
Trigger: CCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGGCAGATGAGGCTGGGACTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS TCA 72 bp AGCCTCATCTGCCTTCTTGTTGCCTCCCGAGTATGTTaGTCACTCAGATGTTTTCATGGCAACCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: SLICLLVASRVC*SLRCFHGNLVS
Trigger: GGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCAACAAGAAGGCAGATGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539859.1
ENST00000546157.1
ENST00000642918.1
ENST00000646885.1
CDS CCA 72 bp CACTCAGATGTTTTCATGGCAACCTGGTCTCCCATCTaGGCATTCCTTGAGTTATGGGTGGAGAAACTGAGG +
Preference number: 6 (lower is better)
Translates to: HSDVFMATWSPI*AFLELWVEKLR
Trigger: CCTCAGTTTCTCCACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 72 bp TGCCTCCCGAGTATGTTGATCACTCAGATGTTTTCATaGCAACCTGGTCTCCCATCTGGGCATTCCTTGAGT +
Preference number: 6 (lower is better)
Translates to: CLPSMLITQMFS*QPGLPSGHSLS
Trigger: ACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTCGGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1
CDS CCA 72 bp GAGTATGTTGATCACTCAGATGTTTTCATGGCAACCTaGTCTCCCATCTGGGCATTCCTTGAGTTATGGGTG +
Preference number: 6 (lower is better)
Translates to: EYVDHSDVFMAT*SPIWAFLELWV
Trigger: CACCCATAACTCAAGGAATGCCCAGATGGGAGACCAGGTTGCCATGAAAACATCTGAGTGATCAACATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546157.1
ENST00000642918.1