RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRTM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162951

Ensembl transcript IDs: ENST00000295057.4, ENST00000409148.1, ENST00000415098.1, ENST00000416268.1, ENST00000417012.5, ENST00000433224.1, ENST00000452811.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGACAAGGAGACCCCAGCCTGGTGCCCGCCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGAC +
Preference number: 1 (lower is better)
Translates to: TDKETPAWCPPARPG*PGVFGSAWVESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTTGTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR GCA 90 bp AGTCAAGGAGCATATCAGAGCACAGACAAGGAGACCCCAGCCTGGTaGCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCA +
Preference number: 1 (lower is better)
Translates to: SQGAYQSTDKETPAW*PPARPGCPGVFGSA
Trigger: TGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTTGTCTGTGCTCTGATATGCTCCTTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR CCA 90 bp TTCAGTCAAGGAGCATATCAGAGCACAGACAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGC +
Preference number: 1 (lower is better)
Translates to: FSQGAYQSTDKETPA*CPPARPGCPGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTTGTCTGTGCTCTGATATGCTCCTTGACTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR CCA 90 bp TTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTaGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGGCACCAGCTTG +
Preference number: 1 (lower is better)
Translates to: FQKLLLCSLHRRWSA*TRKGGEEAWQGTSL
Trigger: CAAGCTGGTGCCCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 90 bp TCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTaGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: SACFQKLLLCSLHRR*SAWTRKGGEEAWQG
Trigger: GCCCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp GGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCAGTTCAGTaGTGCTTGGCTGTGAGGTCCAAGAACACTGTTTCTCATGGGCCG +
Preference number: 1 (lower is better)
Translates to: GCSLLNVLLDFAAVQ*CLAVRSKNTVSHGP
Trigger: CGGCCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp GTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTaGTGCAGTTCAGTGCTGCTTGGCTGTGAGGTCCAAGAACACTGT +
Preference number: 1 (lower is better)
Translates to: VELSRLLAAECVAGF*CSSVLLGCEVQEHC
Trigger: ACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 90 bp GCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAACCAGTaGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTT +
Preference number: 1 (lower is better)
Translates to: AFIPVLWGWWPRINQ*SSAGCSLLNVLLDF
Trigger: AAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp GCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTaGACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: AQILQPVSRNCCYAV*TDGGVLGLGREGRK
Trigger: CTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp TGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCAGTTCAGTGCTaGTTGGCTGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACA +
Preference number: 1 (lower is better)
Translates to: CSLLNVLLDFAAVQC*LAVRSKNTVSHGPT
Trigger: TGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp AAAACCTCAATACCACTGCTGAACTTTAATCAGCTGGGAAGGTACTaGAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTG +
Preference number: 1 (lower is better)
Translates to: KTSIPLLNFNQLGRY*KWRVNPSQCPGRDV
Trigger: CACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTGATTAAAGTTCAGCAGTGGTATTGAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR GCA 90 bp AATCAGCTGGGAAGGTACTGCAAATGGAGGGTCAATCCATCACAATaGCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAGAT +
Preference number: 1 (lower is better)
Translates to: NQLGRYCKWRVNPSQ*PGRDVNCGLKFFSD
Trigger: ATCTGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 90 bp ATTCCTAAAAACCCCACCACACATAAACCAGGAATCCACTGCCTCTaGACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTA +
Preference number: 1 (lower is better)
Translates to: IPKNPTTHKPGIHCL*TGPDSSACFQKLLL
Trigger: TAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGTTTTTAGGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 90 bp TCAATACCACTGCTGAACTTTAATCAGCTGGGAAGGTACTGCAAATaGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGT +
Preference number: 1 (lower is better)
Translates to: SIPLLNFNQLGRYCK*RVNPSQCPGRDVNC
Trigger: ACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTGATTAAAGTTCAGCAGTGGTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 90 bp ACTGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTaGATTGTGGCCTTAAGTTCTTTTCAGATAGCACAGCATAATGAG +
Preference number: 1 (lower is better)
Translates to: TANGGSIHHNAQDET*IVALSSFQIAQHNE
Trigger: CTCATTATGCTGTGCTATCTGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 90 bp ATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGTaGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: IKLADKSTKISRKHK*PLILPEICVYLLGK
Trigger: TTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR GCA 90 bp GAACATAGCTTTCTATGGTCATCATTTGCTCTTAAGCTCCCAGATTaGAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGAC +
Preference number: 1 (lower is better)
Translates to: EHSFLWSSFALKLPD*RFLFPMVLHEMRMD
Trigger: GTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGAGCTTAAGAGCAAATGATGACCATAGAAAGCTATGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 90 bp AGGGTTCAGAAAAACAACGCGTGCACTTTTAAGATGGGAGTAATATaGTGCGATAAATGGTTAATTAAGCCGAGATGGATTTCTTTCCCA +
Preference number: 1 (lower is better)
Translates to: RVQKNNACTFKMGVI*CDKWLIKPRWISFP
Trigger: TGGGAAAGAAATCCATCTCGGCTTAATTAACCATTTATCGCATCATATTACTCCCATCTTAAAAGTGCACGCGTTGTTTTTCTGAACCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 90 bp GTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTTaGCCCTCTGATTACTTACATATACTCATAAATGTGTTGTTGATG +
Preference number: 1 (lower is better)
Translates to: VCTCLENLGGITSGI*PSDYLHILINVLLM
Trigger: CATCAACAACACATTTATGAGTATATGTAAGTAATCAGAGGGGCAAATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 90 bp TTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTTGCCCCTCTaGTTACTTACATATACTCATAAATGTGTTGTTGATGCTAAATCA +
Preference number: 1 (lower is better)
Translates to: LLGKLGRNNKWHLPL*LLTYTHKCVVDAKS
Trigger: TGATTTAGCATCAACAACACATTTATGAGTATATGTAAGTAATCAGAGGGGCAAATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 2 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGGAACACTGTTTCTCATaGGCCGACAGATATGGGACC +
Preference number: 2 (lower is better)
Translates to: CTDGGVLGLGREGRKLGREHCFS*ADRYGT
Trigger: GGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CAA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTaGCTGGATTTTGCTGCAGTTCAGTGCTGCTTGGCTGTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: RINQWSSAGCSLLNV*LDFAAVQCCLAVRS
Trigger: GGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGACCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 2 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAGGAGGGGAGGAAGCTTaGCAGGGCACCAGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGGGEEA*QGTSLE
Trigger: CTCCAAGCTGGTGCCCTGCCAAGCTTCCTCCCCTCC...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp ACCCCACCACACATAAACCAGGAATCCACTGCCTCTGGACTGGCCCAGATTCTTGCTGCAGTTCAGTGCTaGTTGGCTGTGAGGTCCAAG +
Preference number: 2 (lower is better)
Translates to: TPPHINQESTASGLAQILAAVQC*LAVRSK
Trigger: CTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGC...AAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 2 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR CAA 90 bp CACTGCCTCTGGACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATaGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGG +
Preference number: 2 (lower is better)
Translates to: HCLWTGPDSSACFQK*LLCSLHRRWSAWTR
Trigger: CCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGTCCAGAGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 2 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR-3UTR CCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAGTTCTTTGGGGTTGGTaGCCCCGGATAAACCAGTGG +
Preference number: 2 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGVLWGW*PRINQW
Trigger: CCACTGGTTTATCCGGGGCCACCAACCCCAAAGAAC...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CAA 90 bp TCGCTGCTGAATGTGTTGCTGGATTTTGCTGCAGTTCAGTGCTGCTaGGCTGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGAT +
Preference number: 2 (lower is better)
Translates to: SLLNVLLDFAAVQCC*AVRSKNTVSHGPTD
Trigger: ATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR TCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGATATATGCTGCGGATaGGAGGTCTGCTCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVDICCG*EVCSEK
Trigger: CTTCTCTGAGCAGACCTCTCATCCGCAGCATATATC...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACTTCATCCCAGTTCTTTaGGGTTGGTGGCCCCGGATA +
Preference number: 2 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHFIPVL*GWWPRI
Trigger: TATCCGGGGCCACCAACCCCAAAGAACTGGGATGAA...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 2 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAGTAGTAGCCTTTGTGTaGGGGTTCAGAAAAACAACG +
Preference number: 2 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGVVAFV*GFRKTT
Trigger: CGTTGTTTTTCTGAACCCTCACACAAAGGCTACTAC...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGACAGCTGGGAAGGTACTaGAAATGGAGGGTCAATCCA +
Preference number: 2 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRQLGRY*KWRVNP
Trigger: TGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTG...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTAATTAAGCCGAGATaGATTTCTTTCCCACCTTCT +
Preference number: 2 (lower is better)
Translates to: RINQWSSAGCSLLNVLLDLIKPR*ISFPPS
Trigger: AGAAGGTGGGAAAGAAATCCATCTCGGCTTAATTAA...ATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR TCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGGCCCAGGACGAGACGTaGATTGTGGCCTTAAGTTCT +
Preference number: 2 (lower is better)
Translates to: RLGIKLADKSTKISRKHKAQDET*IVALSS
Trigger: AGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGC...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTCCTCAATACCACTGCTaGACTTTAATCAGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: HKWPLILPEICVYLLGKLPQYHC*TLISWE
Trigger: TTCCCAGCTGATTAAAGTTCAGCAGTGGTATTGAGG...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGAGGGCTAAGACTGGTGTaGGAGTGTCATTTGTCATGT +
Preference number: 2 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRGLRLV*ECHLSC
Trigger: ACATGACAAATGACACTCTCACACCAGTCTTAGCCC...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR GCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGCTTGGGAGTATAGGCTaGATTGTGGGTAGGTGGTCT +
Preference number: 2 (lower is better)
Translates to: RLGIKLADKSTKISRKHKLGSIG*IVGRWS
Trigger: AGACCACCTACCCACAATGCAGCCTATACTCCCAAG...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAGCAGAGAGAAAAGGTTaGGGGCTCTTCTACTTTGAT +
Preference number: 2 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRAERKG*GLFYFD
Trigger: ATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGC...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 2 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGCAGAAAAACAACGCGTaGACTTTTAAGATGGGAGTA +
Preference number: 2 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWQKNNA*TFKMGV
Trigger: TACTCCCATCTTAAAAGTGCACGCGTTGTTTTTCTG...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR GCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAAGATCTGTGTGTACTTaGTTGGAAAACTTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRRSVCT*LENLGG
Trigger: TCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCT...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCGAACATAGCTTTCTATaGTCATCATTTGCTCTTAAG +
Preference number: 2 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGEHSFL*SSFALK
Trigger: CTTAAGAGCAAATGATGACCATAGAAAGCTATGTTC...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR GCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGAGGTCTCATTTAACCTaGTTCCTCTGGTCCAACCTA +
Preference number: 2 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWRSHLT*FLWSNL
Trigger: TAGGTTGGACCAGAGGAAGCAGGTTAAATGAGACCT...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 2 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTCCAATGGTTCTTCATaGAATGCGTATGGACTTAAG +
Preference number: 2 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKSNGSS*NAYGLK
Trigger: CTTAAGTCCATACGCATTTCATGAAGAACCATTGGA...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR TCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTTGCCCCTCTaGTTACTTACATATACTCAT +
Preference number: 2 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKWHLPL*LLTYTH
Trigger: ATGAGTATATGTAAGTAATCAGAGGGGCAAATGCCA...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATGATTCCTCTTTCCAATaGTTCTTCATGAAATGCGTA +
Preference number: 2 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHDSSFQ*FFMKCV
Trigger: TACGCATTTCATGAAGAACCATTGGAAAGAGGAATC...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR GCA 72 bp GAGACCCCAGCCTGGTGCCCGCCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGC +
Preference number: 3 (lower is better)
Translates to: ETPAWCPPARPG*PGVFGSAWVES
Trigger: GCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR GCA 72 bp GCATATCAGAGCACAGACAAGGAGACCCCAGCCTGGTaGCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTT +
Preference number: 3 (lower is better)
Translates to: AYQSTDKETPAW*PPARPGCPGVF
Trigger: AAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTTGTCTGTGCTCTGATATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR CCA 72 bp CCAGTTCTTTGGGGTTGGTGGCCCCGGATAAACCAGTaGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTG +
Preference number: 3 (lower is better)
Translates to: PVLWGWWPRINQ*SSAGCSLLNVL
Trigger: CAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp TTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTaGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: LLLCSLHRRWSA*TRKGGEEAWQG
Trigger: GCCCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 72 bp TGGTGGCCCCGGATAAACCAGTGGAGCTCAGCAGGCTaGTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCA +
Preference number: 3 (lower is better)
Translates to: WWPRINQWSSAG*SLLNVLLDFAA
Trigger: TGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp CTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTaGCCCCGGATAAACCAGTGGAGCTCAGCAGGCTGC +
Preference number: 3 (lower is better)
Translates to: LTSAFIPVLWGW*PRINQWSSAGC
Trigger: GCAGCCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp TCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTaGTGGCCCCGGATAAACCAGTGGAGCTCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: SLTSAFIPVLWG*WPRINQWSSAG
Trigger: GCCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR TCA 72 bp TGCTGGATTTTGCTGCAGTTCAGTGCTGCTTGGCTGTaGGGTCCAAGAACACTGTTTCTCATGGGCCGACAG +
Preference number: 3 (lower is better)
Translates to: CWILLQFSAAWL*GPRTLFLMGRQ
Trigger: CTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp TTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTaGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: FQKLLLCSLHRR*SAWTRKGGEEA
Trigger: AGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR TCA 72 bp CAGCTCTTAGAAGATCTAGCAGATATATGCTGCGGATaGGAGGTCTGCTCAGAGAAGGAGGACTGGGGACTG +
Preference number: 3 (lower is better)
Translates to: QLLEDLADICCG*EVCSEKEDWGL
Trigger: CAGTCCCCAGTCCTCCTTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 72 bp CTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTaGACAGACGGTGGAGTGCTTGGACTAGGAAGGGAG +
Preference number: 3 (lower is better)
Translates to: LQPVSRNCCYAV*TDGGVLGLGRE
Trigger: CTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp GGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATaGGACCACAGTAGTAGCCTTTGTGTGAGGGTTCAG +
Preference number: 3 (lower is better)
Translates to: GPRTLFLMGRQI*DHSSSLCVRVQ
Trigger: CTGAACCCTCACACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp CTGCTTGGCTGTGAGGTCCAAGAACACTGTTTCTCATaGGCCGACAGATATGGGACCACAGTAGTAGCCTTT +
Preference number: 3 (lower is better)
Translates to: LLGCEVQEHCFS*ADRYGTTVVAF
Trigger: AAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CCA 72 bp AACCCCACCACACATAAACCAGGAATCCACTGCCTCTaGACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAA +
Preference number: 3 (lower is better)
Translates to: NPTTHKPGIHCL*TGPDSSACFQK
Trigger: TTTCTGGAAACAGGCTGAAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CAA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHAAQAY*VAHGLR
Trigger: TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGC...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR GCA 72 bp GGAAGGTACTGCAAATGGAGGGTCAATCCATCACAATaGCCAGGACGAGACGTGAATTGTGGCCTTAAGTTC +
Preference number: 3 (lower is better)
Translates to: GRYCKWRVNPSQ*PGRDVNCGLKF
Trigger: GAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 72 bp CTGCTGAACTTTAATCAGCTGGGAAGGTACTGCAAATaGAGGGTCAATCCATCACAATGCCCAGGACGAGAC +
Preference number: 3 (lower is better)
Translates to: LLNFNQLGRYCK*RVNPSQCPGRD
Trigger: GTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTGATTAAAGTTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 72 bp GGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTaGATTGTGGCCTTAAGTTCTTTTCAGATAGCACAG +
Preference number: 3 (lower is better)
Translates to: GGSIHHNAQDET*IVALSSFQIAQ
Trigger: CTGTGCTATCTGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CAA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGTCGCTGCTGAATGTGTaGCTGGATTTTGCTGCAGTT +
Preference number: 3 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWSLLNV*LDFAAV
Trigger: AACTGCAGCAAAATCCAGCAACACATTCAGCAGCGA...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 72 bp CTGAATGTGTTGCTGGATTTTGCTGCAGTTCAGTGCTaGTTGGCTGTGAGGTCCAAGAACACTGTTTCTCAT +
Preference number: 3 (lower is better)
Translates to: LNVLLDFAAVQC*LAVRSKNTVSH
Trigger: ATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR GCA 72 bp ATACCACTGCTGAACTTTAATCAGCTGGGAAGGTACTaGAAATGGAGGGTCAATCCATCACAATGCCCAGGA +
Preference number: 3 (lower is better)
Translates to: IPLLNFNQLGRY*KWRVNPSQCPG
Trigger: TCCTGGGCATTGTGATGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTGATTAAAGTTCAGCAGTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 72 bp GCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGTaGCCCCTAATCCTACCAGAGATCTGTGTGTACTTG +
Preference number: 3 (lower is better)
Translates to: ADKSTKISRKHK*PLILPEICVYL
Trigger: CAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIAAQAY*VAHGLR
Trigger: TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGC...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTGCAGTTCAGTGCTGCTaGGCTGTGAGGTCCAAGAAC +
Preference number: 3 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIAVQCC*AVRSKN
Trigger: GTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGC...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR-3UTR CAA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATCAAATGTCTGCCTTCTaGAAGGCAGAGAGAAAAGGT +
Preference number: 3 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHQMSAF*KAERKG
Trigger: ACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTG...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CAA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATGGGGGCTCTTCTACTTaGATGAGTTCAGAAGAATAT +
Preference number: 3 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHGGSST*MSSEEY
Trigger: ATATTCTTCTGAACTCATCAAAGTAGAAGAGCCCCC...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 72 bp TGTAGTCTTGGGAGTATAGGCTGCATTGTGGGTAGGTaGTCTCAACTATTAATATCAAGGCTAAGATCTGAG +
Preference number: 3 (lower is better)
Translates to: CSLGSIGCIVGR*SQLLISRLRSE
Trigger: CTCAGATCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACTCCCAAGACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CCA 72 bp CAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTaGGGGCTCTTCTACTTTGATGAGTTCAGAAGAATA +
Preference number: 3 (lower is better)
Translates to: QMSAFLKAERKG*GLFYFDEFRRI
Trigger: TATTCTTCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR-3UTR CAA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGATTCTATGGTCATCATTaGCTCTTAAGCTCCCAGATT +
Preference number: 3 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRFYGHH*LLSSQI
Trigger: AATCTGGGAGCTTAAGAGCAAATGATGACCATAGAA...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 72 bp CCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATaGAATGCGTATGGACTTAAGATCTTCTACATACAT +
Preference number: 3 (lower is better)
Translates to: PRLQIPLSNGSS*NAYGLKIFYIH
Trigger: ATGTATGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR GCA 72 bp TGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTTaGCCCTCTGATTACTTACATATACTCATAAATGTG +
Preference number: 3 (lower is better)
Translates to: CLENLGGITSGI*PSDYLHILINV
Trigger: CACATTTATGAGTATATGTAAGTAATCAGAGGGGCAAATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR TCA 72 bp AAAAACAACGCGTGCACTTTTAAGATGGGAGTAATATaGTGCGATAAATGGTTAATTAAGCCGAGATGGATT +
Preference number: 3 (lower is better)
Translates to: KNNACTFKMGVI*CDKWLIKPRWI
Trigger: AATCCATCTCGGCTTAATTAACCATTTATCGCATCATATTACTCCCATCTTAAAAGTGCACGCGTTGTTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGGCTCACTCATGCTTTaGGGGCGGCGGGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEGSLML*GRRAAG
Trigger: GCCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGCTCGGCTCGGGGCTaGAAGGGCGGCCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRCSARG*KGGRQG
Trigger: GCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCAGGTGGCCGCTGGTaGGCTCGGCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEAGGRW*ARPHPR
Trigger: GCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCAGGTGGCCGCTGGTaGGCTCGGCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHAGGRW*ARPHPR
Trigger: GCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACACGGCCGAGAGCAGGTaGCCGCTGGTGGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHTAESR*PLVGSA
Trigger: GGCCGAGCCCACCAGCGGCCACCTGCTCTCGGCCGT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGTCCGCGGAAACAGCCTaGCATTCGCGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVESAETA*HSRPGQ
Trigger: CTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGGA...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACAATGTGCCGTCGTGCTaGCCCTCCCCGCCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHNVPSC*PSPPSA
Trigger: CGCGGACGGCGGGGAGGGGCAGCACGACGGCACATT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACGGCGTTCTCGGCGTaGTCGCCGCCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVETAFSA*SPPGRA
Trigger: GGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCTTCCGCAGCCCGTaGAAGAGGTCGGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVESFRSP*KRSGAS
Trigger: GCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCGTGGTGGCCGAGCTaGCAGGGGGCCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHAWWPS*QGAPDH
Trigger: GTGATCTGGGGCCCCCTGCCAGCTCGGCCACCACGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGCGTGCTCGCCGCCTaGAAGAGCCACGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGVLAA*KSHGGR
Trigger: CCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCTGCATTAACCCCGTaGACTGGCCGGCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEAALTP*TGRRAA
Trigger: AGCTGCGCGCCGGCCAGTTCACGGGGTTAATGCAGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGATCACTGCGGTTGGTaGCGGCCGAGAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRDHCGW*RPRAGG
Trigger: GCCACCTGCTCTCGGCCGTCACCAACCGCAGTGATC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTCCGCGGAAACAGCCTaGCATTCGCGCCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHSAETA*HSRPGQ
Trigger: CTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGGA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHDVLAL*VLRAGA
Trigger: TGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACGCGGCCGGCGGATCTaGCAGGCGCACAATGTCTCA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRRGRRI*QAHNVS
Trigger: TGAGACATTGTGCGCCTGCCAGATCCGCCGGCCGCG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATCCCTCGCGGGCTGCTaGTGGCAGGTACACGAGCCA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRSLAGC*WQVHEP
Trigger: TGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCTGCATTAACCCCGTaGACTGGCCGGCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHAALTP*TGRRAA
Trigger: AGCTGCGCGCCGGCCAGTTCACGGGGTTAATGCAGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGGGGCTCGATGTAGGTaGGGCGGTTGGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEGARCR*GGWSPA
Trigger: AGCTGGACTCCAACCGCCTCACCTACATCGAGCCCC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGTTCCCGGCCAGGGTaGTGCTTGTCAGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGSRPG*CLSGTS
Trigger: GGAAGTCCCTGACAAGCATCACCCTGGCCGGGAACC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEAPGSC*ATRLGH
Trigger: GTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGATCACTGCGGTTGGTaGCGGCCGAGAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHDHCGW*RPRAGG
Trigger: GCCACCTGCTCTCGGCCGTCACCAACCGCAGTGATC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCTCCACCAGGCAGTGTaGGGCGCGAGCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHLHQAV*GASLHR
Trigger: CCTGTGCAAGCTCGCGCCGCACACTGCCTGGTGGAG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEALARI*SVVSFR
Trigger: GCGGAAGCTCACCACGCTGCATATGCGGGCCAACGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAG +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRHSLAG*WWQVHE
Trigger: CTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEHSLAG*WWQVHE
Trigger: CTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACAGGCCGGACAGGTTGTaGGGCGCCTCGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRPDRL*GASVRL
Trigger: CAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATTAACCCCGTGAACTaGCCGGCGCGCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEINPVN*PARSSE
Trigger: CTCGGAGCTGCGCGCCGGCCAGTTCACGGGGTTAAT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAATTAACCCCGTGAACTaGCCGGCGCGCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRINPVN*PARSSE
Trigger: CTCGGAGCTGCGCGCCGGCCAGTTCACGGGGTTAAT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGTGCGCAGGTTGGGCATaGGCCGGAAGGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVECAGWA*AGRWCW
Trigger: CCAACACCACCTTCCGGCCCATGCCCAACCTGCGCA...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEPSSHR*KAYTAS
Trigger: GGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACGGCCGAGAGCAGGTaGCCGCTGGTGGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTAESR*PLVGSA
Trigger: GGCCGAGCCCACCAGCGGCCACCTGCTCTCGGCCGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVELAGCW*QVHEPY
Trigger: GTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACCCAGTCCAGCGAGCTaGCCACAATGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRPSPAS*PQWPPC
Trigger: ACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGTTCCCGGCCAGGGTaGTGCTTGTCAGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGSRPG*CLSGTS
Trigger: GGAAGTCCCTGACAAGCATCACCCTGGCCGGGAACC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHAPGSC*ATRLGH
Trigger: GTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGTGCGGCGCGAGCTTaGACAGGCACCTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRCAARA*TGTYCS
Trigger: TGAGCAGTAGGTGCCTGTGCAAGCTCGCGCCGCACA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295057.4
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTCGGGCGCGAGCGCCTaGAGCTTGTTGTACGAGAGG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHSGASA*SLLYER
Trigger: CCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHALARI*SVVSFR
Trigger: GCGGAAGCTCACCACGCTGCATATGCGGGCCAACGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACTAGGGCACACACGTTaGGCCCGCAATCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRLGHTR*ARNPTG
Trigger: ACCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGGCGCACTGCAAGTTaGCATCGTAGCGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRWRTAS*HRSAPG
Trigger: TCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAACCACCTTGTGGATCTaGACGGCGTTCTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRTTLWI*TAFSAC
Trigger: GCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHHSLAG*WWQVHE
Trigger: CTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACGCACGGGCACAAACTaGATGGCGTTGGCCCGCATA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRRTGTN*MALARI
Trigger: TATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHPSSHR*KAYTAS
Trigger: GGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGCGTGGTGGCCGAGCTaGCAGGGGGCCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTAWWPS*QGAPDH
Trigger: GTGATCTGGGGCCCCCTGCCAGCTCGGCCACCACGC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVELEEPR*QARMCR
Trigger: ACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEPVTTL*ICTAFS
Trigger: CGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHLAGCW*QVHEPY
Trigger: GTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGCGGCGGGCAGCATCTaGAAGCAGGCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTAAGSI*KQAPSR
Trigger: TCTGCTGGGGGCCTGCTTTCAGATGCTGCCCGCCGC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCGATGTCGAGAAACTTaGGGCTGCGGCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVERCRET*GCGSPG
Trigger: TCCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGGACTTCCAAGAGTTaGGGATCCGGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGTSKS*GSGARC
Trigger: ACATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCGAGCTTCGCCTTCCTaGCGCCTTCCTTTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRASPS*RLPFPL
Trigger: CAGAGGGAAAGGAAGGCGGCAGGAAGGCGAAGCTCG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACACAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRHNVSL*CSARGC
Trigger: GCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGCAGGGACTGCAGGTaGGGCACGGTCTCGAACACA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHCRDCR*GTVSNT
Trigger: TGTGTTCGAGACCGTGCCGCACCTGCAGTCCCTGCA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCTAGGGCACACACGTTaGGCCCGCAATCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHLGHTR*ARNPTG
Trigger: ACCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGCGCACTGCAAGTTaGCATCGTAGCGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHWRTAS*HRSAPG
Trigger: TCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTDVLAL*VLRAGA
Trigger: TGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGAATGTGCCGTCGTGCTaGCCCTCCCCGCCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRNVPSC*PSPPSA
Trigger: CGCGGACGGCGGGGAGGGGCAGCACGACGGCACATT...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACACCACCTTGTGGATCTaGACGGCGTTCTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHTTLWI*TAFSAC
Trigger: GCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCAAACTGGATGGCGTTaGCCCGCATATGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEQTGWR*PAYAAW
Trigger: CCACGCTGCATATGCGGGCCAACGCCATCCAGTTTG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCGCACGGGCACAAACTaGATGGCGTTGGCCCGCATA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRTGTN*MALARI
Trigger: TATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGAGGCGCGGGAAGTaGGCGAAGTTCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEMRRGK*AKFTLT
Trigger: GGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCAT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGTGCGTACTCCGGGCTaGCGCACTGCAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHVRTPG*RTASCH
Trigger: ATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCAC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHLEEPR*QARMCR
Trigger: ACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGCTGCATTAACCCCGTaGACTGGCCGGCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTAALTP*TGRRAA
Trigger: AGCTGCGCGCCGGCCAGTTCACGGGGTTAATGCAGC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGGCGAAGTTCACCTTaGCCAAGTCGTTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGRSSP*PSRCAR
Trigger: TCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGGACTTCCAAGAGTTaGGGATCCGGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGTSKS*GSGARC
Trigger: ACATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGCAGTCCTGGAAGATaGGCACGGGCACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGSPGR*ARAQTG
Trigger: TCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGTTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVELTKSL*SRCSSV
Trigger: CACCGAGCTGCACCTCGAGCACAACGACTTGGTCAA...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATCCAGCTGCAGGGACTaGAGGTGCGGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSSCRD*RCGTVS
Trigger: CGAGACCGTGCCGCACCTGCAGTCCCTGCAGCTGGA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGCACTGTCTGAGCTaGCTGAGGCTGGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEKHCLS*LRLAGK
Trigger: TTTCCCAGCCAGCCTCAGGCAGCTCAGACAGTGCTT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCGGGCACAAACTGGATaGCGTTGGCCCGCATATGCA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRAQTG*RWPAYA
Trigger: TGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCCAGTTCTTTGGGGTTaGTGGCCCCGGATAAACCAG +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEPVLWG*WPRINQ
Trigger: CTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCCACTGCCTCTGGACTaGCCCAGATTCTTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHPLPLD*PRFFSL
Trigger: CAGGCTGAAGAATCTGGGCCAGTCCAGAGGCAGTGG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAATTGGAAACGACCACTaGCCGGCGCCACCTTTTACT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRIGNDH*PAPPFT
Trigger: AGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAAT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACTCGGCGCAGTTTCTaGAAGGCGTCCCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTRRSF*KASPCT
Trigger: CGTGCAGGGGGACGCCTTTCAGAAACTGCGCCGAGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTAYAAW*ASAARG
Trigger: TCCACGGGCTGCGGAAGCTCACCACGCTGCATATGC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGGGGCTCGATGTAGGTaGGGCGGTTGGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTGARCR*GGWSPA
Trigger: AGCTGGACTCCAACCGCCTCACCTACATCGAGCCCC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGACATGGCAGCCATCTaGTGCATGGTCTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRDMAAI*CMVCFC
Trigger: GCAGAAACAGACCATGCATCAGATGGCTGCCATGTC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATCGGGCGCGAGCGCCTaGAGCTTGTTGTACGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSGASA*SLLYER
Trigger: CCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTHSLAG*WWQVHE
Trigger: CTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGCAGTTGGGTGATCTaGTTGGAACTCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGSWVI*LELSVS
Trigger: ACTCACGCTGAGTTCCAACCAGATCACCCAACTGCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGTGGTGTTGGGCAGTTaGGTGATCTGGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRVVLGS*VIWLEL
Trigger: GAGTTCCAACCAGATCACCCAACTGCCCAACACCAC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATGCGCAGGTTGGGCATaGGCCGGAAGGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTCAGWA*AGRWCW
Trigger: CCAACACCACCTTCCGGCCCATGCCCAACCTGCGCA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAAGGCTGCGGCAGTCCTaGAAGATGCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTRLRQS*KMRTGT
Trigger: TGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAACGGTCTCGAACACATaGGGCTCCATGTACTCGATC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRTVSNT*GSMYSI
Trigger: GATCGAGTACATGGAGCCCCATGTGTTCGAGACCGT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCGCGTGGTGGCCGAGCTaGCAGGGGGCCCCAGATCAC +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCAWWPS*QGAPDH
Trigger: GTGATCTGGGGCCCCCTGCCAGCTCGGCCACCACGC...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACATTGGAAACGACCACTaGCCGGCGCCACCTTTTACT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHIGNDH*PAPPFT
Trigger: AGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAAT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR TCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRARLLS*LYPMSR
Trigger: TCTCGACATCGGATACAATCAGCTCAAGAGTCTGGC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEARLLS*LYPMSR
Trigger: TCTCGACATCGGATACAATCAGCTCAAGAGTCTGGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGCGCGCCAGACTCTTaGGCTGATTGTATCCGATGT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHCAPDS*ADCIRC
Trigger: ACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGACATGGCAGCCATCTaGTGCATGGTCTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHDMAAI*CMVCFC
Trigger: GCAGAAACAGACCATGCATCAGATGGCTGCCATGTC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATGGCGCACTGCAAGTTaGCATCGTAGCGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTWRTAS*HRSAPG
Trigger: TCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCDVLAL*VLRAGA
Trigger: TGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTC...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCAGCTGGGAAGGTACTaGAAATGGAGGGTCAATCCA +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEQLGRY*KWRVNP
Trigger: TGGATTGACCCTCCATTTGCAGTACCTTCCCAGCTG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGTTAATGTCCGTCATTaGAAACGACCACTGACCGGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEVNVRH*KRPLTG
Trigger: GCCGGTCAGTGGTCGTTTCCAATGACGGACATTAAC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGAGGCTGCGGCAGTCCTaGAAGATGCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRRLRQS*KMRTGT
Trigger: TGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCT...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACCCCACCACACATAAACCAGGAATCCACTGCCTCTGGACTGGCCCAGATTCTTACGGCCGAGAGCAGGTaGCCGCTGGTGGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TPPHINQESTASGLAQILTAESR*PLVGSA
Trigger: GGCCGAGCCCACCAGCGGCCACCTGCTCTCGGCCGT...AAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGTTGAGAGCCACTaGGACAATCACACCTCGCAT +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHWVESH*DNHTSH
Trigger: ATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGCAGGGCACCAGCTTaGAGCTCGATTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGRAPA*SSIFLL
Trigger: AAGAAGAAAAATCGAGCTCCAAGCTGGTGCCCTGCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACGATGTCGAGAAACTTaGGGCTGCGGCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTRCRET*GCGSPG
Trigger: TCCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGGGACTTCCAAGAGTTaGGGATCCGGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTGTSKS*GSGARC
Trigger: ACATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGGCAGTCCTGGAAGATaGGCACGGGCACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTGSPGR*ARAQTG
Trigger: TCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGTCTGTTTCTGCTTTTaGTTCCTGCGCTGCGTGACA +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHVCFCF*FLRCVT
Trigger: TGTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGAC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGTTGCTGGATTTTGCTaGAGTTCAGTGCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHVAGFC*SSVLLG
Trigger: GCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAAC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGTCAATCCATCACAATaGCCAGGACGAGACGTGAAT +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEVNPSQ*PGRDVN
Trigger: ATTCACGTCTCGTCCTGGGCATTGTGATGGATTGAC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCTGGAGAATGTCCATTaGAAGCGCTCGGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVELENVH*KRSVRN
Trigger: ATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACAAACTGGATGGCGTTaGCCCGCATATGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTQTGWR*PAYAAW
Trigger: CCACGCTGCATATGCGGGCCAACGCCATCCAGTTTG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACGGGCACAAACTGGATaGCGTTGGCCCGCATATGCA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTRAQTG*RWPAYA
Trigger: TGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAATGAGGCGCGGGAAGTaGGCGAAGTTCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTMRRGK*AKFTLT
Trigger: GGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCAT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATGTTGGGCAGTTGGGTaGTCTGGTTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTCWAVG*SGWNSA
Trigger: CGCTGAGTTCCAACCAGATCACCCAACTGCCCAACA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGGGCGAAGTTCACCTTaGCCAAGTCGTTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTGRSSP*PSRCAR
Trigger: TCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTLTKSL*SRCSSV
Trigger: CACCGAGCTGCACCTCGAGCACAACGACTTGGTCAA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGTACTCGATCTCGTTaGCCGACAAGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRCTRSR*PTSPFS
Trigger: AGAAAATGGACTTGTCGGGCAACGAGATCGAGTACA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAAAGCACTGTCTGAGCTaGCTGAGGCTGGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTKHCLS*LRLAGK
Trigger: TTTCCCAGCCAGCCTCAGGCAGCTCAGACAGTGCTT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCAGGATCTGACAGTCTaGTTAATGTCCGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEQDLTV*LMSVIG
Trigger: TCCAATGACGGACATTAACCAGACTGTCAGATCCTG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGTCTTTCCAGAGAGACTaGAGAATGTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CPPARPGCPGVFGSAWVESFQRD*RMSIGS
Trigger: GCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGA...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAATGCCCTGTTCTACTaGGCCATGTCAGATAGACTA +
Preference number: 4 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRNALFY*AMSDRL
Trigger: TAGTCTATCTGACATGGCCCAGTAGAACAGGGCATT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAGCGGCGGGCAGCATCTaGAAGCAGGCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKAAGSI*KQAPSR
Trigger: TCTGCTGGGGGCCTGCTTTCAGATGCTGCCCGCCGC...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATACTCGGCGCAGTTTCTaGAAGGCGTCCCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: RINQWSSAGCSLLNVLLDTRRSF*KASPCT
Trigger: CGTGCAGGGGGACGCCTTTCAGAAACTGCGCCGAGT...ATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGACATGGCAGCCATCTaGTGCATGGTCTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTDMAAI*CMVCFC
Trigger: GCAGAAACAGACCATGCATCAGATGGCTGCCATGTC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGCCCAGGACGAGACGTaGATTGTGGCCTTAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTAQDET*IVALSS
Trigger: AGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATCGTTGTGCTCGAGGTaGAGCTCGGTGAGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSLCSR*SSVSLN
Trigger: GTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCTGCAGGGACTGCAGGTaGGGCACGGTCTCGAACACA +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCCRDCR*GTVSNT
Trigger: TGTGTTCGAGACCGTGCCGCACCTGCAGTCCCTGCA...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCAGCTTCCGCAGCCCGTaGAAGAGGTCGGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGSFRSP*KRSGAS
Trigger: GCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCT...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACGGTCTCGAACACATaGGGCTCCATGTACTCGATC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTVSNT*GSMYSI
Trigger: GATCGAGTACATGGAGCCCCATGTGTTCGAGACCGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAGCTGCATTAACCCCGTaGACTGGCCGGCGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKAALTP*TGRRAA
Trigger: AGCTGCGCGCCGGCCAGTTCACGGGGTTAATGCAGC...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATGCAGGCTAATTATATaGAGGGCGAGAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTCRLII*RAREDP
Trigger: GGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAACGAGAGGTCCACGCTaGGCAGGTTGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKTRGPR*AGWAWA
Trigger: GGCCCATGCCCAACCTGCGCAGCGTGGACCTCTCGT...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp ACCCCACCACACATAAACCAGGAATCCACTGCCTCTGGACTGGCCCAGATTCTTGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: TPPHINQESTASGLAQILALARI*SVVSFR
Trigger: GCGGAAGCTCACCACGCTGCATATGCGGGCCAACGC...AAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTATCGAATGTGCCGTCGTaGTGCCCCTCCCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVSNVPS*CPSPPS
Trigger: GGACGGCGGGGAGGGGCAGCACGACGGCACATTCGA...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATACCACCTTGTGGATCTaGACGGCGTTCTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: RINQWSSAGCSLLNVLLDTTLWI*TAFSAC
Trigger: GCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGT...ATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGACCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKAYAAW*ASAARG
Trigger: TCCACGGGCTGCGGAAGCTCACCACGCTGCATATGC...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGAGTGCTGCTTGGCTGTaGGGTCCAAGAACACTGTTT +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRSAAWL*GPRTLF
Trigger: AAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACT...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTCCAATGGTTCTTCATaGAATGCGTATGGACTTAAG +
Preference number: 4 (lower is better)
Translates to: PARPGCPGVFGSAWVESHSNGSS*NAYGLK
Trigger: CTTAAGTCCATACGCATTTCATGAAGAACCATTGGA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTGCTCGGCTCGGGGCTaGAAGGGCGGCCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHCSARG*KGGRQG
Trigger: GCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCA...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCTTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCLTKSL*SRCSSV
Trigger: CACCGAGCTGCACCTCGAGCACAACGACTTGGTCAA...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGTCCAGCTGCAGGGACTaGAGGTGCGGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVSSCRD*RCGTVS
Trigger: CGAGACCGTGCCGCACCTGCAGTCCCTGCAGCTGGA...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATGCAGGTGGCCGCTGGTaGGCTCGGCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHAGGRW*ARPHPR
Trigger: GCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGC...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCCAGGCTGCTCGCTGCTaGATGTGTTGCTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCQAARC*MCCWIL
Trigger: CAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTG...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTGGCTCACTCATGCTTTaGGGGCGGCGGGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTGSLML*GRRAAG
Trigger: GCCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCC...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAAATGTGCCGTCGTGCTaGCCCTCCCCGCCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSNVPSC*PSPPSA
Trigger: CGCGGACGGCGGGGAGGGGCAGCACGACGGCACATT...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACTGGCAGGCTCGAATGTaGCGTCGTGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHWQARM*RRAAPP
Trigger: GGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCA...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATCTTTCCAGAGAGACTaGAGAATGTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSFQRD*RMSIGS
Trigger: GCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAATTAACCCCGTGAACTaGCCGGCGCGCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVINPVN*PARSSE
Trigger: CTCGGAGCTGCGCGCCGGCCAGTTCACGGGGTTAAT...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTAAGGAGACCCCAGCCTaGTGCCCGCCGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTKETPA*CPPARP
Trigger: GGGACGGGCCGGCGGGCACCAGGCTGGGGTCTCCTT...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCAGTCTGCACAGACGGTaGAGTGCTTGGACTAGGAAG +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCSLHRR*SAWTRK
Trigger: CTTCCTAGTCCAAGCACTCCACCGTCTGTGCAGACT...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CAA 72 bp CAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTaGCTGGATTTTGCTGCAGTTCAGTGCTGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QWSSAGCSLLNV*LDFAAVQCCLA
Trigger: AGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
3UTR CAA 72 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTaGGTGGCCCCGGATAAACCAGTGGAGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLG*VAPDKPVELSR
Trigger: CCTGCTGAGCTCCACTGGTTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGAGCGGCGGGCAGCATCTaGAAGCAGGCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRAAGSI*KQAPSR
Trigger: TCTGCTGGGGGCCTGCTTTCAGATGCTGCCCGCCGC...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCGCGCCCCGGGCAGCTaGAGAGAGCGGGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHRAPGS*RERAHS
Trigger: TGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTGCTCGGCTCGGGGCTaGAAGGGCGGCCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYCSARG*KGGRQG
Trigger: GCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCA...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCTGCAGGCTAATTATATaGAGGGCGAGAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: PVELSRLLAAECVAGFCCCRLII*RAREDP
Trigger: GGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCA...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAACGAGAGGTCCACGCTaGGCAGGTTGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRTRGPR*AGWAWA
Trigger: GGCCCATGCCCAACCTGCGCAGCGTGGACCTCTCGT...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTTCCAGCTGCAGGGACTaGAGGTGCGGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLSSCRD*RCGTVS
Trigger: CGAGACCGTGCCGCACCTGCAGTCCCTGCAGCTGGA...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAATGTGCCGTCGTGCTaGCCCTCCCCGCCGTCCGCG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHNVPSC*PSPPSA
Trigger: CGCGGACGGCGGGGAGGGGCAGCACGACGGCACATT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGTGTGTTGCTGGATTTTaGTGCAGTTCAGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRCVAGF*CSSVLL
Trigger: AAGCAGCACTGAACTGCAGCAAAATCCAGCAACACA...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TGCACAGACGGTGGAGTGCTTGGACTAGGAAGGGAGGGGAGGAAGCTTGGCAGGTCTTTCCAGAGAGACTaGAGAATGTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CTDGGVLGLGREGRKLGRSFQRD*RMSIGS
Trigger: GCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGA...CCTGCCAAGCTTCCTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATCCACGCTGCGCAGGTTaGGCATGGGCCGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHPRCAG*AWAGRW
Trigger: CCACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGG...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGGTGCGTACTCCGGGCTaGCGCACTGCAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVVRTPG*RTASCH
Trigger: ATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCAC...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCAGGTGGCCGCTGGTaGGCTCGGCCCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYAGGRW*ARPHPR
Trigger: GCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACGGCCGAGAGCAGGTaGCCGCTGGTGGGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTAESR*PLVGSA
Trigger: GGCCGAGCCCACCAGCGGCCACCTGCTCTCGGCCGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGGCGTGCTCGCCGCCTaGAAGAGCCACGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHGVLAA*KSHGGR
Trigger: CCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGAGGCGTGCTCGCCGCCTaGAAGAGCCACGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRGVLAA*KSHGGR
Trigger: CCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCC...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTACCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVPVTTL*ICTAFS
Trigger: CGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGG...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: RINQWSSAGCSLLNVLLDVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...ATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGACCCCGGATAAACCAGTaGAGCTCAGCAGGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGPRINQ*SSAGCS
Trigger: CGAGCAGCCTGCTGAGCTCCACTGGTTTATCCGGGG...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACGGAGGGGAGGAAGCTTaGCAGGGCACCAGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHGGEEA*QGTSLE
Trigger: CTCCAAGCTGGTGCCCTGCCAAGCTTCCTCCCCTCC...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCGGCGGGCAGCATCTaGAAGCAGGCCCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHAAGSI*KQAPSR
Trigger: TCTGCTGGGGGCCTGCTTTCAGATGCTGCCCGCCGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTACTCGGCGCAGTTTCTaGAAGGCGTCCCCCTGCACG +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLTRRSF*KASPCT
Trigger: CGTGCAGGGGGACGCCTTTCAGAAACTGCGCCGAGT...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCGGGCGAAGTTCACCTTaGCCAAGTCGTTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGGRSSP*PSRCAR
Trigger: TCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCC...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGCCCAGTCCAGCGAGCTaGCCACAATGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWPSPAS*PQWPPC
Trigger: ACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGG...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAAGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREAPGSC*ATRLGH
Trigger: GTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGC...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCGCGCCCCGGGCAGCTaGAGAGAGCGGGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYRAPGS*RERAHS
Trigger: TGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKDVLAL*VLRAGA
Trigger: TGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTC...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTCGAATGTGCCGTCGTaGTGCCCCTCCCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHSNVPS*CPSPPS
Trigger: GGACGGCGGGGAGGGGCAGCACGACGGCACATTCGA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATACGGCGTTCTCGGCGTaGTCGCCGCCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHTAFSA*SPPGRA
Trigger: GGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATAGGCCGGACAGGTTGTaGGGCGCCTCGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHRPDRL*GASVRL
Trigger: CAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCT...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCCACGCTGCGCAGGTTaGGCATGGGCCGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHPRCAG*AWAGRW
Trigger: CCACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTACAAACTGGATGGCGTTaGCCCGCATATGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVQTGWR*PAYAAW
Trigger: CCACGCTGCATATGCGGGCCAACGCCATCCAGTTTG...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGCGCACGGGCACAAACTaGATGGCGTTGGCCCGCATA +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWRTGTN*MALARI
Trigger: TATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCG...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAGTTCTTTGGGGTTGGTaGCCCCGGATAAACCAGTGG +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKVLWGW*PRINQW
Trigger: CCACTGGTTTATCCGGGGCCACCAACCCCAAAGAAC...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAAGACGGTGGAGTGCTTaGACTAGGAAGGGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVRRWSA*TRKGGE
Trigger: CTCCCCTCCCTTCCTAGTCCAAGCACTCCACCGTCT...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSAYAAW*ASAARG
Trigger: TCCACGGGCTGCGGAAGCTCACCACGCTGCATATGC...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCTGCGCGCCAGACTCTTaGGCTGATTGTATCCGATGT +
Preference number: 4 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGCAPDS*ADCIRC
Trigger: ACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCA...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAGGGCGAAGTTCACCTTaGCCAAGTCGTTGTGCTCGA +
Preference number: 4 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGGRSSP*PSRCAR
Trigger: TCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCC...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAGGGGCTCGATGTAGGTaGGGCGGTTGGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSGARCR*GGWSPA
Trigger: AGCTGGACTCCAACCGCCTCACCTACATCGAGCCCC...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAGGTTCCCGGCCAGGGTaGTGCTTGTCAGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSGSRPG*CLSGTS
Trigger: GGAAGTCCCTGACAAGCATCACCCTGGCCGGGAACC...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGATCACTGCGGTTGGTaGCGGCCGAGAGCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHDHCGW*RPRAGG
Trigger: GCCACCTGCTCTCGGCCGTCACCAACCGCAGTGATC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATACGAGAGGTCCACGCTaGGCAGGTTGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHTRGPR*AGWAWA
Trigger: GGCCCATGCCCAACCTGCGCAGCGTGGACCTCTCGT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTCCAGCTGCAGGGACTaGAGGTGCGGCACGGTCTCG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHSSCRD*RCGTVS
Trigger: CGAGACCGTGCCGCACCTGCAGTCCCTGCAGCTGGA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTCGAATGTGCCGTCGTaGTGCCCCTCCCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYSNVPS*CPSPPS
Trigger: GGACGGCGGGGAGGGGCAGCACGACGGCACATTCGA...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGGCAGGCTCGAATGTaGCGTCGTGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHWQARM*RRAAPP
Trigger: GGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACGGCGTTCTCGGCGTaGTCGCCGCCTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTAFSA*SPPGRA
Trigger: GGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGACCGGCCCGTCCCGGCTaGCCAGGCGTATTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRPARPG*PGVFGS
Trigger: GCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTATGGAGCTCAGCAGGCTaGTCGCTGCTGAATGTGTTG +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVWSSAG*SLLNVL
Trigger: CAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCA...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAGGCCGGACAGGTTGTaGGGCGCCTCGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHRPDRL*GASVRL
Trigger: CAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAGTGGTGTTGGGCAGTTaGGTGATCTGGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKVVLGS*VIWLEL
Trigger: GAGTTCCAACCAGATCACCCAACTGCCCAACACCAC...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCCACGCTGCGCAGGTTaGGCATGGGCCGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYPRCAG*AWAGRW
Trigger: CCACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATAGCTTCCGCAGCCCGTaGAAGAGGTCGGGCGCGAGC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYSFRSP*KRSGAS
Trigger: GCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAAGGCTGCGGCAGTCCTaGAAGATGCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSRLRQS*KMRTGT
Trigger: TGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCT...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAAATTCCTGGGCAGACATaGCAGCCATCTGATGCATGG +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKIPGQT*QPSDAW
Trigger: CCATGCATCAGATGGCTGCCATGTCTGCCCAGGAAT...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGTCCCTCGCGGGCTGCTaGTGGCAGGTACACGAGCCA +
Preference number: 4 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWSLAGC*WQVHEP
Trigger: TGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGA...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACTGTTGGGCAGTTGGGTaGTCTGGTTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHCWAVG*SGWNSA
Trigger: CGCTGAGTTCCAACCAGATCACCCAACTGCCCAACA...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHAYAAW*ASAARG
Trigger: TCCACGGGCTGCGGAAGCTCACCACGCTGCATATGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCTCCACCAGGCAGTGTaGGGCGCGAGCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYLHQAV*GASLHR
Trigger: CCTGTGCAAGCTCGCGCCGCACACTGCCTGGTGGAG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWNVSLC*SARGCK
Trigger: CTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATT...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACGAGAGGTCCACGCTaGGCAGGTTGGGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTRGPR*AGWAWA
Trigger: GGCCCATGCCCAACCTGCGCAGCGTGGACCTCTCGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTCGGGCGCGAGCGCCTaGAGCTTGTTGTACGAGAGG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHSGASA*SLLYER
Trigger: CCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGTCGGGCGCGAGCGCCTaGAGCTTGTTGTACGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLGIKLADKSTKISRKHKSGASA*SLLYER
Trigger: CCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGA...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTGGCAGGCTCGAATGTaGCGTCGTGCTGCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYWQARM*RRAAPP
Trigger: GGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCA...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAATGCTGTTATGCAGTCTaGACAGACGGTGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKCCYAV*TDGGVL
Trigger: AAGCACTCCACCGTCTGTGCAGACTGCATAACAGCA...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTAACCCCGTGAACTaGCCGGCGCGCAGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHINPVN*PARSSE
Trigger: CTCGGAGCTGCGCGCCGGCCAGTTCACGGGGTTAAT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGGCAGTTGGGTGATCTaGTTGGAACTCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVGSWVI*LELSVS
Trigger: ACTCACGCTGAGTTCCAACCAGATCACCCAACTGCC...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAGGCTGCGGCAGTCCTaGAAGATGCGCACGGGCACA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHRLRQS*KMRTGT
Trigger: TGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAAATGAGGCGCGGGAAGTaGGCGAAGTTCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREMRRGK*AKFTLT
Trigger: GGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCAT...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHPSSHR*KAYTAS
Trigger: GGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCC +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTPSSHR*KAYTAS
Trigger: GGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGG...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHLAGCW*QVHEPY
Trigger: GTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
3UTR CAA 72 bp TGGACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATaGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: WTGPDSSACFQK*LLCSLHRRWSA
Trigger: AGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCACGATGTCGAGAAACTTaGGGCTGCGGCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSRCRET*GCGSPG
Trigger: TCCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCG...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCCCAGTCCAGCGAGCTaGCCACAATGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHPSPAS*PQWPPC
Trigger: ACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGCCCAGTCCAGCGAGCTaGCCACAATGGCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RLGIKLADKSTKISRKHKPSPAS*PQWPPC
Trigger: ACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGG...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGGGCTCGATGTAGGTaGGGCGGTTGGAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGARCR*GGWSPA
Trigger: AGCTGGACTCCAACCGCCTCACCTACATCGAGCCCC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGTTCCCGGCCAGGGTaGTGCTTGTCAGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGSRPG*CLSGTS
Trigger: GGAAGTCCCTGACAAGCATCACCCTGGCCGGGAACC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYAPGSC*ATRLGH
Trigger: GTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAGTTTCCCAACTACGTaGCGGAGCCCGAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHSFPTT*RSPSFA
Trigger: GGCGAAGCTCGGGCTCCGGCACGTAGTTGGGAAACT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGAGTTTCCCAACTACGTaGCGGAGCCCGAGCTTCGCC +
Preference number: 4 (lower is better)
Translates to: RLGIKLADKSTKISRKHKSFPTT*RSPSFA
Trigger: GGCGAAGCTCGGGCTCCGGCACGTAGTTGGGAAACT...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYALARI*SVVSFR
Trigger: GCGGAAGCTCACCACGCTGCATATGCGGGCCAACGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACTCGTTGTGCTCGAGGTaGAGCTCGGTGAGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHSLCSR*SSVSLN
Trigger: GTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGA...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTGCAGGGACTGCAGGTaGGGCACGGTCTCGAACACA +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTCRDCR*GTVSNT
Trigger: TGTGTTCGAGACCGTGCCGCACCTGCAGTCCCTGCA...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGGCGCACTGCAAGTTaGCATCGTAGCGCCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHWRTAS*HRSAPG
Trigger: TCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACATCGAATGTGCCGTCGTaGTGCCCCTCCCCGCCGTCC +
Preference number: 4 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTSNVPS*CPSPPS
Trigger: GGACGGCGGGGAGGGGCAGCACGACGGCACATTCGA...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGGTCTGTTTCTGCTTTTaGTTCCTGCGCTGCGTGACA +
Preference number: 4 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVVCFCF*FLRCVT
Trigger: TGTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGAC...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGATGCGCAGGTTGGGCATaGGCCGGAAGGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRCAGWA*AGRWCW
Trigger: CCAACACCACCTTCCGGCCCATGCCCAACCTGCGCA...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCACGGGCACAAACTGGATaGCGTTGGCCCGCATATGCA +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSRAQTG*RWPAYA
Trigger: TGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCG...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCGCACGGGCACAAACTaGATGGCGTTGGCCCGCATA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHRTGTN*MALARI
Trigger: TATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHLEEPR*QARMCR
Trigger: ACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHPVTTL*ICTAFS
Trigger: CGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGACCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRPVTTL*ICTAFS
Trigger: CGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGG...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATAC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYLAGCW*QVHEPY
Trigger: GTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACGGAATCCACTGCCTCTaGACTGGCCCAGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHGIHCL*TGPDSS
Trigger: TGAAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCC...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGTCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWSFSRE*QPPFSC
Trigger: GCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGA...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWARLLS*LYPMSR
Trigger: TCTCGACATCGGATACAATCAGCTCAAGAGTCTGGC...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGGATATATGCTGCGGATaGGAGGTCTGCTCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWDICCG*EVCSEK
Trigger: CTTCTCTGAGCAGACCTCTCATCCGCAGCATATATC...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGCCTTCCTTTCCCTCTaGAGTTCGGACTGTGACGTT +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLAFLSL*SSDCDV
Trigger: AACGTCACAGTCCGAACTGCAGAGGGAAAGGAAGGC...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCACAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHHNVSL*CSARGC
Trigger: GCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGAGGCAGTCCTGGAAGATaGGCACGGGCACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRGSPGR*ARAQTG
Trigger: TCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCC...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGATTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRLTKSL*SRCSSV
Trigger: CACCGAGCTGCACCTCGAGCACAACGACTTGGTCAA...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCTAGGGCACACACGTTaGGCCCGCAATCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYLGHTR*ARNPTG
Trigger: ACCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGACTAGGGCACACACGTTaGGCCCGCAATCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRLGHTR*ARNPTG
Trigger: ACCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAG...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAAAAACCAGGAATCCACTaGCTCTGGACTGGCCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREKPGIH*LWTGPD
Trigger: ATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTT...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTAGGCCGGACAGGTTGTaGGGCGCCTCGGTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIRPDRL*GASVRL
Trigger: CAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCT...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGCAAACTGGATGGCGTTaGCCCGCATATGCAGCGTGG +
Preference number: 4 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKQTGWR*PAYAAW
Trigger: CCACGCTGCATATGCGGGCCAACGCCATCCAGTTTG...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGTGCGTACTCCGGGCTaGCGCACTGCAAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYVRTPG*RTASCH
Trigger: ATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCAC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGACTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGT +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRLEEPR*QARMCR
Trigger: ACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAG...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CAA 72 bp AATGTGTTGCTGGATTTTGCTGCAGTTCAGTGCTGCTaGGCTGTGAGGTCCAAGAACACTGTTTCTCATGGG +
Preference number: 4 (lower is better)
Translates to: NVLLDFAAVQCC*AVRSKNTVSHG
Trigger: CCCATGAGAAACAGTGTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGCAAAATCCAGCAACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGTTGGGCAGTTGGGTaGTCTGGTTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHCWAVG*SGWNSA
Trigger: CGCTGAGTTCCAACCAGATCACCCAACTGCCCAACA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGAGGGACTTCCAAGAGTTaGGGATCCGGGGCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRGTSKS*GSGARC
Trigger: ACATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCC...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHNVSLC*SARGCK
Trigger: CTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGCAGTCCTGGAAGATaGGCACGGGCACAAACTGGA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGSPGR*ARAQTG
Trigger: TCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGTGTACTCGATCTCGTTaGCCGACAAGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVCTRSR*PTSPFS
Trigger: AGAAAATGGACTTGTCGGGCAACGAGATCGAGTACA...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATAAGCACTGTCTGAGCTaGCTGAGGCTGGCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHKHCLS*LRLAGK
Trigger: TTTCCCAGCCAGCCTCAGGCAGCTCAGACAGTGCTT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGTCTGTTTCTGCTTTTaGTTCCTGCGCTGCGTGACA +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLVCFCF*FLRCVT
Trigger: TGTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGAC...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCTGCAGTTCAGTGCTaGTTGGCTGTGAGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHAAVQC*LAVRSK
Trigger: CTTGGACCTCACAGCCAAGCAGCACTGAACTGCAGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTTGCGCAGGTTGGGCATaGGCCGGAAGGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERICAGWA*AGRWCW
Trigger: CCAACACCACCTTCCGGCCCATGCCCAACCTGCGCA...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATATGAGGCGCGGGAAGTaGGCGAAGTTCACCTTGACC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYMRRGK*AKFTLT
Trigger: GGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCAT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGCAGCCATCTGATGCATaGTCTGTTTCTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVQPSDA*SVSAFA
Trigger: AGCAAAAGCAGAAACAGACCATGCATCAGATGGCTG...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGAGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRVFGSA*VESHWD
Trigger: GTCCCAGTGGCTCTCAACCCATGCGCTACCAAATAC...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGCGCGCCAGACTCTTaGGCTGATTGTATCCGATGT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHCAPDS*ADCIRC
Trigger: ACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCCTTCCTTTCCCTCTaGAGTTCGGACTGTGACGTT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHAFLSL*SSDCDV
Trigger: AACGTCACAGTCCGAACTGCAGAGGGAAAGGAAGGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYNVSLC*SARGCK
Trigger: CTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTCGTTGTGCTCGAGGTaGAGCTCGGTGAGCTTAAAC +
Preference number: 4 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKSLCSR*SSVSLN
Trigger: GTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGA...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGACTTGGGAGTATAGGCTaGATTGTGGGTAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRLGSIG*IVGRWS
Trigger: AGACCACCTACCCACAATGCAGCCTATACTCCCAAG...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGGCAGTTGGGTGATCTaGTTGGAACTCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHGSWVI*LELSVS
Trigger: ACTCACGCTGAGTTCCAACCAGATCACCCAACTGCC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGTGGTGTTGGGCAGTTaGGTGATCTGGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHVVLGS*VIWLEL
Trigger: GAGTTCCAACCAGATCACCCAACTGCCCAACACCAC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGGTGGTGTTGGGCAGTTaGGTGATCTGGTTGGAACTC +
Preference number: 4 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKVVLGS*VIWLEL
Trigger: GAGTTCCAACCAGATCACCCAACTGCCCAACACCAC...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTCCTGGGCAGACATaGCAGCCATCTGATGCATGG +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHIPGQT*QPSDAW
Trigger: CCATGCATCAGATGGCTGCCATGTCTGCCCAGGAAT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGGGTTGAGAGCCACTaGGACAATCACACCTCGCAT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHWVESH*DNHTSH
Trigger: ATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGGTTGAGAGCCACTaGGACAATCACACCTCGCAT +
Preference number: 4 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKWVESH*DNHTSH
Trigger: ATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCA...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHSFSRE*QPPFSC
Trigger: GCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTSFSRE*QPPFSC
Trigger: GCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGA...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYPFSRE*QPPFSC
Trigger: GCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409148.1
CDS-3UTR TCA 90 bp ACTGGCCCAGATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACCACACTCATACTTTTTaGGCCAAACTGTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: TGPDSSACFQKLLLCSLHHTHTF*AKLSVK
Trigger: CTTCACTGACAGTTTGGCTCAAAAAGTATGAGTGTG...GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATCTGGGCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGAATCAAGGCTAAGATCTaGGCATCAGGGACTGCCTAT +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRIKAKI*ASGTAY
Trigger: ATAGGCAGTCCCTGATGCTCAGATCTTAGCCTTGAT...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTCACAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIHNVSL*CSARGC
Trigger: GCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTG...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGCAGGCTAATTATATaGAGGGCGAGAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHCRLII*RAREDP
Trigger: GGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTACAGAAAAACAACGCGTaGACTTTTAAGATGGGAGTA +
Preference number: 4 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVQKNNA*TFKMGV
Trigger: TACTCCCATCTTAAAAGTGCACGCGTTGTTTTTCTG...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTAGGTCTCATTTAACCTaGTTCCTCTGGTCCAACCTA +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLRSHLT*FLWSNL
Trigger: TAGGTTGGACCAGAGGAAGCAGGTTAAATGAGACCT...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTGTTAATGTCCGTCATTaGAAACGACCACTGACCGGC +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTVNVRH*KRPLTG
Trigger: GCCGGTCAGTGGTCGTTTCCAATGACGGACATTAAC...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGAACGGTCTCGAACACATaGGGCTCCATGTACTCGATC +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRTVSNT*GSMYSI
Trigger: GATCGAGTACATGGAGCCCCATGTGTTCGAGACCGT...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATATTCCTGGGCAGACATaGCAGCCATCTGATGCATGG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYIPGQT*QPSDAW
Trigger: CCATGCATCAGATGGCTGCCATGTCTGCCCAGGAAT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGGCCGACAGATATaGGACCACAGTAGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHMGRQI*DHSSSL
Trigger: AAGGCTACTACTGTGGTCCCATATCTGTCGGCCCAT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATAGCCGGAAACACAAGTaGCCCCTAATCCTACCAGAG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYSRKHK*PLILPE
Trigger: CTCTGGTAGGATTAGGGGCCACTTGTGTTTCCGGCT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CAA 72 bp TCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTaGGGAGGAATAACAAGTGGCATTTGCCCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SYQRSVCTCLEN*GGITSGICPSD
Trigger: ATCAGAGGGGCAAATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
3UTR CAA 72 bp AAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTaGCTTGGAAAACTTGGGAGGAATAACAAGTGGCAT +
Preference number: 4 (lower is better)
Translates to: KWPLILPEICVY*LGKLGRNNKWH
Trigger: ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACATGTTGGGCAGTTGGGTaGTCTGGTTGGAACTCAGCG +
Preference number: 4 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTCWAVG*SGWNSA
Trigger: CGCTGAGTTCCAACCAGATCACCCAACTGCCCAACA...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYARLLS*LYPMSR
Trigger: TCTCGACATCGGATACAATCAGCTCAAGAGTCTGGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGCACAGGGGCATGAAATaGTGTGAGCTAAATTCCCGT +
Preference number: 4 (lower is better)
Translates to: RLGIKLADKSTKISRKHKHRGMK*CELNSR
Trigger: ACGGGAATTTAGCTCACATCATTTCATGCCCCTGTG...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGAGGGCTAAGACTGGTGTaGGAGTGTCATTTGTCATGT +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRGLRLV*ECHLSC
Trigger: ACATGACAAATGACACTCTCACACCAGTCTTAGCCC...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGATTCTACCATCTCATGTaGTCCATCAATGCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRFYHLM*SINALF
Trigger: GAACAGGGCATTGATGGATCACATGAGATGGTAGAA...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCATGTACTCGATCTCGTTaGCCGACAAGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSCTRSR*PTSPFS
Trigger: AGAAAATGGACTTGTCGGGCAACGAGATCGAGTACA...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGTCTGTTTCTGCTTTTaGTTCCTGCGCTGCGTGACA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYVCFCF*FLRCVT
Trigger: TGTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGAC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR GCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTTGTGTAGACAACGTTTaGTTGCCTACAAAGACACAC +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLCVDNV*LPTKTH
Trigger: GTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGACATGTGATCCATCAATaGCCTGTTCTACTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRHVIHQ*PVLLGH
Trigger: ATGGCCCAGTAGAACAGGGCATTGATGGATCACATG...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATTCTTTCCAGAGAGACTaGAGAATGTCCATTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHSFQRD*RMSIGS
Trigger: GCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGA...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTTTGACATTCTGTCAATaGCAGACCCAAATCAGCCAA +
Preference number: 4 (lower is better)
Translates to: HKWPLILPEICVYLLGKLLTFCQ*QTQISQ
Trigger: TTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTTGCGCGCCAGACTCTTaGGCTGATTGTATCCGATGT +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERICAPDS*ADCIRC
Trigger: ACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCA...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAGATCTTCTACATACATaGTGTTTAATCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRDLLHT*CLIMGR
Trigger: CCTGCCCATGATTAAACATCATGTATGTAGAAGATC...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGCCTCAATACCACTGCTaGACTTTAATCAGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWPQYHC*TLISWE
Trigger: TTCCCAGCTGATTAAAGTTCAGCAGTGGTATTGAGG...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTGTACTCGATCTCGTTaGCCGACAAGTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHCTRSR*PTSPFS
Trigger: AGAAAATGGACTTGTCGGGCAACGAGATCGAGTACA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGACAGGATCTGACAGTCTaGTTAATGTCCGTCATTGGA +
Preference number: 4 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRQDLTV*LMSVIG
Trigger: TCCAATGACGGACATTAACCAGACTGTCAGATCCTG...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCTGGAGAATGTCCATTaGAAGCGCTCGGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYLENVH*KRSVRN
Trigger: ATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCAGCCATCTGATGCATaGTCTGTTTCTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHQPSDA*SVSAFA
Trigger: AGCAAAAGCAGAAACAGACCATGCATCAGATGGCTG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTTGGGTTGAGAGCCACTaGGACAATCACACCTCGCAT +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIWVESH*DNHTSH
Trigger: ATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCA...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGTAGTAGCCTTTGTGTaGGGGTTCAGAAAAACAACG +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYVVAFV*GFRKTT
Trigger: CGTTGTTTTTCTGAACCCTCACACAAAGGCTACTAC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAATGTTTATTACAGATGTaGTTCAAACAGCTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: ALRRSSRYMLRMRGLLRECLLQM*FKQLAV
Trigger: AACTGCCAGCTGTTTGAAGCACATCTGTAATAAACA...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR GCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGCTTAAGCTCCCAGATTaGAGATTCCTCTTTCCAATG +
Preference number: 4 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWLKLPD*RFLFPM
Trigger: CATTGGAAAGAGGAATCTGCAATCTGGGAGCTTAAG...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGATCATACCAAATGTCTaGCTTCTTGAAGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWIIPNV*LLEGRE
Trigger: CTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGAT...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGAGATCTGTGTGTACTTaGTTGGAAAACTTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWRSVCT*LENLGG
Trigger: TCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCT...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCAGCCATCTGATGCATaGTCTGTTTCTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYQPSDA*SVSAFA
Trigger: AGCAAAAGCAGAAACAGACCATGCATCAGATGGCTG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CCA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGAGGAAGGTACTGCAAATaGAGGGTCAATCCATCACAA +
Preference number: 4 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRGRYCK*RVNPSQ
Trigger: TTGTGATGGATTGACCCTCCATTTGCAGTACCTTCC...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTAAATGCTTAGTAGTTTaGTTAGAGGGGTCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTKCLVV*LEGSEQ
Trigger: TTGCTCTGACCCCTCTAAGCAAACTACTAAGCATTT...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR GCA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGAATAACAAGTGGCATTTaGCCCTCTGATTACTTACAT +
Preference number: 4 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRITSGI*PSDYLH
Trigger: ATGTAAGTAATCAGAGGGGCAAATGCCACTTGTTAT...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTCTGGAGAATGTCCATTaGAAGCGCTCGGTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERILENVH*KRSVRN
Trigger: ATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAG...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CCA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAGAACATAGCTTTCTATaGTCATCATTTGCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: LTFCQWQTQISQHRHSSREHSFL*SSFALK
Trigger: CTTAAGAGCAAATGATGACCATAGAAAGCTATGTTC...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACACTCTCAGATTCCTaGATATGGACAGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTLSDS*IWTDLQ
Trigger: TTGAAGATCTGTCCATATTCAGGAATCTGAGAGTGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR TCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATTGGCATTTGCCCCTCTaGTTACTTACATATACTCAT +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYWHLPL*LLTYTH
Trigger: ATGAGTATATGTAAGTAATCAGAGGGGCAAATGCCA...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACAGCAGAGAGAAAAGGTTaGGGGCTCTTCTACTTTGAT +
Preference number: 4 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTAERKG*GLFYFD
Trigger: ATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGC...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGATTCCTCTTTCCAATaGTTCTTCATGAAATGCGTA +
Preference number: 4 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYDSSFQ*FFMKCV
Trigger: TACGCATTTCATGAAGAACCATTGGAAAGAGGAATC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CCA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTTTAATTAAGCCGAGATaGATTTCTTTCCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RSCLLQMCFKQLAVVERILIKPR*ISFPPS
Trigger: AGAAGGTGGGAAAGAAATCCATCTCGGCTTAATTAA...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS GCA 90 bp CCTGCCATTCGCGCCCCGGGCAGCTGCAGAGAGCGGGCTCACTCATaGTTTGCGGGCGGCGGGCGGCGGGCGGCGGGCGGTGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PAIRAPGSCRERAHS*FAGGGRRAAGGGEV
Trigger: CACCTCCCCACCGCCCGCCGCCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS GCA 90 bp GTCCGCGGCCGGCGGATCTGGCAGGCGCACAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAGGGCGGCCGGCAAGGCGGGGAGGCG +
Preference number: 5 (lower is better)
Translates to: VRGRRIWQAHNVSLC*SARGCKGGRQGGEA
Trigger: CGCCTCCCCGCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCCGCGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp CCGGTCCGCGGCCGGCGGATCTGGCAGGCGCACAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGCAAGGGCGGCCGGCAAGGCGGGGAG +
Preference number: 5 (lower is better)
Translates to: PVRGRRIWQAHNVSL*CSARGCKGGRQGGE
Trigger: CTCCCCGCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCCGCGGACCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp TCTGCACGGCGTTCTCGGCGTGCTCGCCGCCTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGTCGTGCTGCCCCTCCCCGCCGTCCG +
Preference number: 5 (lower is better)
Translates to: SARRSRRARRLEEPR*QARMCRRAAPPRRP
Trigger: CGGACGGCGGGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGCAGGCCGGACAGGTaGTGGGGCGCCTCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRSRPDR*WGASVR
Trigger: CCTCACCGAGGCGCCCCACAACCTGTCCGGCCTGCT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp CCTTTTACTCCGCGGAAACAGCCTGCCATTCGCGCCCCGGGCAGCTaGAGAGAGCGGGCTCACTCATGCTTTGCGGGCGGCGGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: PFTPRKQPAIRAPGS*RERAHSCFAGGGRR
Trigger: CCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGGAGTAAAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS CCA 90 bp GAGAGCAGGTGGCCGCTGGTGGGCTCGGCCCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCCAGGACGTCCTCGCCCTGTGCGTAC +
Preference number: 5 (lower is better)
Translates to: ESRWPLVGSAPSSHR*KAYTASRTSSPCAY
Trigger: GTACGCACAGGGCGAGGACGTCCTGGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGCTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGC +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEGASVR*SASQYS
Trigger: GCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGASVR*SASQYS
Trigger: GCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGTGTGCGGCGCGAGCTaGCACAGGCACCTACTGCTC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRVCGAS*HRHLLL
Trigger: GAGCAGTAGGTGCCTGTGCAAGCTCGCGCCGCACAC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295057.4
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGGGCTCACTCATGCTTaGCGGGCGGCGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTGLTHA*RAAGGG
Trigger: CCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCCC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTCCACGCTGCGCAGGTaGGGCATGGGCCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHSTLRR*GMGRKV
Trigger: CACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGGA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCTAGGGCACACACGTaGCGCCCGCAATCCCACAGG +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEARAHT*RPQSHR
Trigger: CCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACCCAGATCACTGCGGTaGGTGACGGCCGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRPRSLR*VTAESR
Trigger: CCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 90 bp GCACGGGCACAAACTGGATGGCGTTGGCCCGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGAAGAGGTCGGGCGCGAGCGCCTGCA +
Preference number: 5 (lower is better)
Translates to: ARAQTGWRWPAYAAW*ASAARGRGRARAPA
Trigger: TGCAGGCGCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 90 bp ATCTGGCAGGCGCACAATGTCTCACTTTGCTGCTCGGCTCGGGGCTaGAAGGGCGGCCGGCAAGGCGGGGAGGCGACTTCTAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: IWQAHNVSLCCSARG*KGGRQGGEATSRTR
Trigger: GCGGGTCCTAGAAGTCGCCTCCCCGCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp GCACAGGTGGAAGGCGTACACGGCGTCCAGGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCACTGCAAGTTGCCATCGTAGCGCCC +
Preference number: 5 (lower is better)
Translates to: AQVEGVHGVQDVLAL*VLRAGALQVAIVAP
Trigger: GGGCGCTACGATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTCCTGGACGCCGTGTACGCCTTCCACCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp GACCACCTTGTGGATCTGCACGGCGTTCTCGGCGTGCTCGCCGCCTaGAAGAGCCACGGTGGCAGGCTCGAATGTGCCGTCGTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: DHLVDLHGVLGVLAA*KSHGGRLECAVVLP
Trigger: GGGCAGCACGACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGGCCGGAAGGTGGTGTaGGGCAGTTGGGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRGRKVV*GSWVIW
Trigger: CCAGATCACCCAACTGCCCAACACCACCTTCCGGCC...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGGCGAGCGCCTGCAGCTaGTTGTACGAGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEASACS*LYERST
Trigger: CGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGC...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCCCAGATCACTGCGGTaGGTGACGGCCGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHPRSLR*VTAESR
Trigger: CCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp ATGGTGCCCGTGACCACCTTGTGGATCTGCACGGCGTTCTCGGCGTaGTCGCCGCCTGGAAGAGCCACGGTGGCAGGCTCGAATGTGCCG +
Preference number: 5 (lower is better)
Translates to: MVPVTTLWICTAFSA*SPPGRATVAGSNVP
Trigger: CGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATaGGTTGAGAGCCACTGGGACAATCACACCTCGCATTCCCTCGCG +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSA*VESHWDNHTSHSLA
Trigger: CGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGCCGGAAGGTGGTGTaGGGCAGTTGGGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGRKVV*GSWVIW
Trigger: CCAGATCACCCAACTGCCCAACACCACCTTCCGGCC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGCGCCTGCAGCTTGTaGTACGAGAGGTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRSACSL*YERSTL
Trigger: CAGCGTGGACCTCTCGTACAACAAGCTGCAGGCGCT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCGCCTGCAGCTTGTaGTACGAGAGGTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVESACSL*YERSTL
Trigger: CAGCGTGGACCTCTCGTACAACAAGCTGCAGGCGCT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACCGATGTCGAGAAACTaGAGGCTGCGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRPMSRN*RLRQSW
Trigger: CCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCCGATGTCGAGAAACTaGAGGCTGCGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEPMSRN*RLRQSW
Trigger: CCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAAGCCGGCGAAAGAGTaGCGCGCCAGACTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRKPAKE*RARLLS
Trigger: GCTCAAGAGTCTGGCGCGCAACTCTTTCGCCGGCTT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGCCGGCGAAAGAGTaGCGCGCCAGACTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEKPAKE*RARLLS
Trigger: GCTCAAGAGTCTGGCGCGCAACTCTTTCGCCGGCTT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAACCACAATGGCCACCTaGTTCCTCCGCAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRTTMAT*FLRRQS
Trigger: GCTCTGCCTGCGGAGGAACAAGGTGGCCATTGTGGT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCGCCCCTGGAAGTTGTaGAGCCACGAGGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRPWKL*SHEARA
Trigger: TGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGTGCCCGTGACCACCTaGTGGATCTGCACGGCGTTC +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHVPVTT*WICTAF
Trigger: GAACGCCGTGCAGATCCACAAGGTGGTCACGGGCAC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp TGGAAGATGCGCACGGGCACAAACTGGATGGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGCAGCCCGTGGAAGAGGTCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: WKMRTGTNWMALARI*SVVSFRSPWKRSGA
Trigger: CGCGCCCGACCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 90 bp CGCTCGGTCAGAAATAATGTCTCACTTTGCTGCTCGGCTCGGGGCTaGAAGGGCGGCCGGCAAGGCGGGGAGGCGACTTCTAGGACCCGC +
Preference number: 5 (lower is better)
Translates to: RSVRNNVSLCCSARG*KGGRQGGEATSRTR
Trigger: GCGGGTCCTAGAAGTCGCCTCCCCGCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTATTTCTGACCGAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452811.1
CDS CCA 90 bp ATGGCGTTGGCCCGCATATGCAGCGTGGTGAGCTTCCGCAGCCCGTaGAAGAGGTCGGGCGCGAGCGCCTGCAGCTTGTTGTACGAGAGG +
Preference number: 5 (lower is better)
Translates to: MALARICSVVSFRSP*KRSGASACSLLYER
Trigger: CCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATCCACGCTGCGCAGGTaGGGCATGGGCCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSTLRR*GMGRKV
Trigger: CACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGGA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACCCGATGTCGAGAAACTaGAGGCTGCGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHPMSRN*RLRQSW
Trigger: CCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGG...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGGGACTTCCAAGAGTaGAGGATCCGGGGCTCGATG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRRDFQE*RIRGSM
Trigger: CATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCCT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGCACGAGCCATACTCGTaGATGATCACCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEHEPYS*MITRAP
Trigger: GGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTG...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACACGAGCCATACTCGTaGATGATCACCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRHEPYS*MITRAP
Trigger: GGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTG...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp AAACGACCACTGACCGGCGCCACCTTTTACTCCGCGGAAACAGCCTaGCATTCGCGCCCCGGGCAGCTGCAGAGAGCGGGCTCACTCATG +
Preference number: 5 (lower is better)
Translates to: KRPLTGATFYSAETA*HSRPGQLQRAGSLM
Trigger: CATGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGGAGTAAAAGGTGGCGCCGGTCAGTGGTCGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS GCA 90 bp AAGGAGAAGATGAGGGCCATGGTGCCCGTGACCACCTTGTGGATCTaGACGGCGTTCTCGGCGTGCTCGCCGCCTGGAAGAGCCACGGTG +
Preference number: 5 (lower is better)
Translates to: KEKMRAMVPVTTLWI*TAFSACSPPGRATV
Trigger: CACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCATCTTCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp CCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTaGGACAATCACACCTCGCATTCCCTCGCGGGCTGCTGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PGCPGVFGSAWVESH*DNHTSHSLAGCWWQ
Trigger: CTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHTNWMA*ARICSV
Trigger: CACGCTGCATATGCGGGCCAACGCCATCCAGTTTGT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACACCTTGACCAAGTCGTaGTGCTCGAGGTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHTLTKS*CSRCSS
Trigger: CGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGGGCGAAGTTCACCTaGACCAAGTCGTTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRWAKFT*TKSLCS
Trigger: CGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACAGGGACTTCCAAGAGTaGAGGATCCGGGGCTCGATG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHRDFQE*RIRGSM
Trigger: CATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCCT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACCCAGATCACTGCGGTaGGTGACGGCCGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTPRSLR*VTAESR
Trigger: CCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHAAQAY*VAHGLR
Trigger: TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 90 bp GGCTGGCGCACTGCAAGTTGCCATCGTAGCGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCACACACGTTGCGCCCGCAATCCCACA +
Preference number: 5 (lower is better)
Translates to: GWRTASCHRSAPGSC*ATRLGHTRCARNPT
Trigger: TGTGGGATTGCGGGCGCAACGTGTGTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp AAGGCGGGGAGGCGACTTCTAGGACCCGCAAGTTTCCCAACTACGTaGCGGAGCCCGAGCTTCGCCTTCCTGCCGCCTTCCTTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: KAGRRLLGPASFPTT*RSPSFAFLPPSFPS
Trigger: AGAGGGAAAGGAAGGCGGCAGGAAGGCGAAGCTCGGGCTCCGGCACGTAGTTGGGAAACTTGCGGGTCCTAGAAGTCGCCTCCCCGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000433224.1
ENST00000452811.1
CDS CCA 90 bp ATGAGGAAGGAGAAGATGAGGGCCATGGTGCCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCGGCGTGCTCGCCGCCTGGAAGAGCC +
Preference number: 5 (lower is better)
Translates to: MRKEKMRAMVPVTTL*ICTAFSACSPPGRA
Trigger: GGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCATCTTCTCCTTCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAAGTTGGGTGATCTGGTaGGAACTCAGCGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRSWVIW*ELSVSS
Trigger: GGAACTCACGCTGAGTTCCAACCAGATCACCCAACT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGTGGTGTTGGGCAGTaGGGTGATCTGGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGGVGQ*GDLVGT
Trigger: AGTTCCAACCAGATCACCCAACTGCCCAACACCACC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGCGAAGTTCACCTaGACCAAGTCGTTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHWAKFT*TKSLCS
Trigger: CGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCA...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACACGCCCCTGGAAGTTGTaGAGCCACGAGGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTRPWKL*SHEARA
Trigger: TGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCG...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGGTCTGTTTCTGCTTTaGCTTCCTGCGCTGCGTGAC +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHGLFLL*LPALRD
Trigger: GTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGACC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp AACTTGAGGCTGCGGCAGTCCTGGAAGATGCGCACGGGCACAAACTaGATGGCGTTGGCCCGCATATGCAGCGTGGTGAGCTTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: NLRLRQSWKMRTGTN*MALARICSVVSFRS
Trigger: GCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCTCAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVETGECP*EALGQK
Trigger: TTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRTGECP*EALGQK
Trigger: TTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp AGCCACTGGGACAATCACACCTCGCATTCCCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATACTCGTTGATGATCACCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SHWDNHTSHSLAGCW*QVHEPYSLMITRAP
Trigger: GGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTNWMA*ARICSV
Trigger: CACGCTGCATATGCGGGCCAACGCCATCCAGTTTGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAACCTTGACCAAGTCGTaGTGCTCGAGGTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTTLTKS*CSRCSS
Trigger: CGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAATGTACTCGATCTCGTaGCCCGACAAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRMYSIS*PDKSIF
Trigger: GAAAATGGACTTGTCGGGCAACGAGATCGAGTACAT...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATGTACTCGATCTCGTaGCCCGACAAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: CPPARPGCPGVFGSAWVEMYSIS*PDKSIF
Trigger: GAAAATGGACTTGTCGGGCAACGAGATCGAGTACAT...CTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGATCGCTGCTGAATGTGTaGCTGGATTTTGCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: ARRPVPAAQAYLVAHGLRSLLNV*LDFAAV
Trigger: AACTGCAGCAAAATCCAGCAACACATTCAGCAGCGA...TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS CCA 90 bp CCTGCGCTGCGTGACAAAGCACTGTCTGAGCTGCCTGAGGCTGGCTaGGAAACACTTCCAGGACACGTAGAGCACCAGGACCACGATGAG +
Preference number: 5 (lower is better)
Translates to: PALRDKALSELPEAG*ETLPGHVEHQDHDE
Trigger: CTCATCGTGGTCCTGGTGCTCTACGTGTCCTGGAAGTGTTTCCCAGCCAGCCTCAGGCAGCTCAGACAGTGCTTTGTCACGCAGCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp GAGAGCCACTGGGACAATCACACCTCGCATTCCCTCGCGGGCTGCTaGTGGCAGGTACACGAGCCATACTCGTTGATGATCACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: ESHWDNHTSHSLAGC*WQVHEPYSLMITRA
Trigger: AGCCCTGGTGATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATTTTGCTGCGCGAGCGCCTGCAGCTaGTTGTACGAGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: PVELSRLLAAECVAGFCCASACS*LYERST
Trigger: CGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGC...GCAGCAAAATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACATGTACTCGATCTCGTaGCCCGACAAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHMYSIS*PDKSIF
Trigger: GAAAATGGACTTGTCGGGCAACGAGATCGAGTACAT...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACATTGGTAGCGCATGGGTaGAGAGCCACTGGGACAATC +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTLVAHG*RATGTI
Trigger: GATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAA...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACGCCTGTTTCCAGAAATaGCTGTTATGCAGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PARPGCPGVFGSAWVESHACFQK*LLCSLH
Trigger: GTGCAGACTGCATAACAGCAATTTCTGGAAACAGGC...GTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS GCA 90 bp GGGAAGTGGGCGAAGTTCACCTTGACCAAGTCGTTGTGCTCGAGGTaGAGCTCGGTGAGCTTAAACAAGCCGGCGAAAGAGTTGCGCGCC +
Preference number: 5 (lower is better)
Translates to: GKWAKFTLTKSLCSR*SSVSLNKPAKELRA
Trigger: GGCGCGCAACTCTTTCGCCGGCTTGTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp GTTGAGAGCCACTGGGACAATCACACCTCGCATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAGCCATACTCGTTGATGATCACCAGG +
Preference number: 5 (lower is better)
Translates to: VESHWDNHTSHSLAG*WWQVHEPYSLMITR
Trigger: CCTGGTGATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp GAGTCCAGCTGCAGGGACTGCAGGTGCGGCACGGTCTCGAACACATaGGGCTCCATGTACTCGATCTCGTTGCCCGACAAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: ESSCRDCRCGTVSNT*GSMYSISLPDKSIF
Trigger: GAAAATGGACTTGTCGGGCAACGAGATCGAGTACATGGAGCCCCATGTGTTCGAGACCGTGCCGCACCTGCAGTCCCTGCAGCTGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAAGCAGGCCGGACAGGTaGTGGGGCGCCTCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGSRPDR*WGASVR
Trigger: CCTCACCGAGGCGCCCCACAACCTGTCCGGCCTGCT...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAAGTTGGGTGATCTGGTaGGAACTCAGCGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTSWVIW*ELSVSS
Trigger: GGAACTCACGCTGAGTTCCAACCAGATCACCCAACT...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp ATGAGGCGCGGGAAGTGGGCGAAGTTCACCTTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTGAGCTTAAACAAGCCGGCGAAAGAG +
Preference number: 5 (lower is better)
Translates to: MRRGKWAKFTLTKSL*SRCSSVSLNKPAKE
Trigger: CTCTTTCGCCGGCTTGTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 90 bp GACAACCTCCATTCAGCTGCTCCCTTTGTGTGCAGGCTAATTATATaGAGGGCGAGAGAAGACCCCTCTGTGTTTCCGAGGCAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DNLHSAAPFVCRLII*RAREDPSVFPRQPR
Trigger: CCGGGGCTGCCTCGGAAACACAGAGGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCACACAAAGGGAGCAGCTGAATGGAGGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000415098.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp GCTCGCGACTCCCCAGGATCTGACAGTCTGGTTAATGTCCGTCATTaGAAACGACCACTGACCGGCGCCACCTTTTACTCCGCGGAAACA +
Preference number: 5 (lower is better)
Translates to: ARDSPGSDSLVNVRH*KRPLTGATFYSAET
Trigger: TGTTTCCGCGGAGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAATGACGGACATTAACCAGACTGTCAGATCCTGGGGAGTCGCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CAA 90 bp TCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGAGTGCTTGGACTAGGAGCTAGGGCACACACGTaGCGCCCGCAATCCCACAGG +
Preference number: 5 (lower is better)
Translates to: SRNCCYAVCTDGGVLGLGARAHT*RPQSHR
Trigger: CCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAGC...TCCTAGTCCAAGCACTCCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS TCA 90 bp CAGGATCTGACAGTCTGGTTAATGTCCGTCATTGGAAACGACCACTaGCCGGCGCCACCTTTTACTCCGCGGAAACAGCCTGCCATTCGC +
Preference number: 5 (lower is better)
Translates to: QDLTVWLMSVIGNDH*PAPPFTPRKQPAIR
Trigger: GCGAATGGCAGGCTGTTTCCGCGGAGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAATGACGGACATTAACCAGACTGTCAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGGCTCACTCATGCTTaGCGGGCGGCGGGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGLTHA*RAAGGG
Trigger: CCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCCC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS-3UTR CAA 90 bp ACCCCACCACACATAAACCAGGAATCCACTGCCTCTGGACTGGCCCAGATTCTTACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: TPPHINQESTASGLAQILTNWMA*ARICSV
Trigger: CACGCTGCATATGCGGGCCAACGCCATCCAGTTTGT...AAGAATCTGGGCCAGTCCAGAGGCAGTGGATTCCTGGTTTATGTGTGGTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS TCA 90 bp AGCTTAAACAAGCCGGCGAAAGAGTTGCGCGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGAAACTTGAGGCTGCGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLNKPAKELRARLLS*LYPMSRNLRLRQSW
Trigger: CCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCAACTCTTTCGCCGGCTTGTTTAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp AATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCCTTAAGTTCTTTTCAGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGC +
Preference number: 5 (lower is better)
Translates to: NPSQCPGRDVNCGLKFFSGASVR*SASQYS
Trigger: GCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCC...TGAAAAGAACTTAAGGCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TTCTTGAAGGCAGAGAGAAAAGGTTGGGGGCTCTTCTACTTTGATGAGTTCAGATCCACGCTGCGCAGGTaGGGCATGGGCCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: FLKAERKGWGLFYFDEFRSTLRR*GMGRKV
Trigger: CACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGGA...TCTGAACTCATCAAAGTAGAAGAGCCCCCAACCTTTTCTCTCTGCCTTCAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TGTGAGGTCCAAGAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAACCACAATGGCCACCTaGTTCCTCCGCAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: CEVQEHCFSWADRYGTTVTTMAT*FLRRQS
Trigger: GCTCTGCCTGCGGAGGAACAAGGTGGCCATTGTGGT...TACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTCTTGGACCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCAGGGACTTCCAAGAGTaGAGGATCCGGGGCTCGATG +
Preference number: 5 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGRDFQE*RIRGSM
Trigger: CATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCCT...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAACACGAGCCATACTCGTaGATGATCACCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKHEPYS*MITRAP
Trigger: GGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTG...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp CTCTCTCACATCTGCTTTCATCCCAGTTCTTTGGGGTTGGTGGCCCCGGATAAACCCAGTTCTTTGGGGTaGGTGGCCCCGGATAAACCA +
Preference number: 5 (lower is better)
Translates to: LSHICFHPSSLGLVAPDKPSSLG*VAPDKP
Trigger: TGGTTTATCCGGGGCCACCAACCCCAAAGAACTGGG...TTTATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAAGCAGATGTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTGGGACAGAGCTAAATTCCCGTTaGTGTAGACAACGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: VPAAQAYLVAHGLRATGTELNSR*CRQRLL
Trigger: AAGCAAACGTTGTCTACACAAACGGGAATTTAGCTC...TGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGC +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHGASVR*SASQYS
Trigger: GCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAAGGCCGGAAGGTGGTGTaGGGCAGTTGGGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREGRKVV*GSWVIW
Trigger: CCAGATCACCCAACTGCCCAACACCACCTTCCGGCC...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp CGGATAAACCAGTGGAGCTCAGCAGGCTGCTCGCTGCTGAATGTGTTGCTGGATATGTACTCGATCTCGTaGCCCGACAAGTCCATTTTC +
Preference number: 5 (lower is better)
Translates to: RINQWSSAGCSLLNVLLDMYSIS*PDKSIF
Trigger: GAAAATGGACTTGTCGGGCAACGAGATCGAGTACAT...ATCCAGCAACACATTCAGCAGCGAGCAGCCTGCTGAGCTCCACTGGTTTATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCTAGGGCACACACGTaGCGCCCGCAATCCCACAGG +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHARAHT*RPQSHR
Trigger: CCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWAAQAY*VAHGLR
Trigger: TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGC...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTGCGAGCGCCTGCAGCTaGTTGTACGAGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTASACS*LYERST
Trigger: CGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGC...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATCGCCCCTGGAAGTTGTaGAGCCACGAGGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHRPWKL*SHEARA
Trigger: TGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCG...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTCGCCCCTGGAAGTTGTaGAGCCACGAGGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTRPWKL*SHEARA
Trigger: TGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCG...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATCCCAGATCACTGCGGTaGGTGACGGCCGAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYPRSLR*VTAESR
Trigger: CCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGG...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGACACGAGCCATACTCGTaGATGATCACCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRHEPYS*MITRAP
Trigger: GGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTG...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp GATTCTTCAGCCTGTTTCCAGAAATTGCTGTTATGCAGTCTGCACAGACGGTGGGCAGTTCAGTGCTGCTaGGCTGTGAGGTCCAAGAAC +
Preference number: 5 (lower is better)
Translates to: DSSACFQKLLLCSLHRRWAVQCC*AVRSKN
Trigger: GTTCTTGGACCTCACAGCCAAGCAGCACTGAACTGC...CCACCGTCTGTGCAGACTGCATAACAGCAATTTCTGGAAACAGGCTGAAGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS GCA 90 bp CCTTTTCCAGAGAGTGACAACCTCCATTCAGCTGCTCCCTTTGTGTaGAGGCTAATTATATGCAGGGCGAGAGAAGACCCCTCTGTGTTT +
Preference number: 5 (lower is better)
Translates to: PFPESDNLHSAAPFV*RLIICRAREDPSVF
Trigger: AAACACAGAGGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCACACAAAGGGAGCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000415098.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATGCACAATGTCTCACTTaGCTGCTCGGCTCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHAQCLT*LLGSGL
Trigger: CAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGC...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAAGGTGGTGTTGGGCAGTaGGGTGATCTGGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREGGVGQ*GDLVGT
Trigger: AGTTCCAACCAGATCACCCAACTGCCCAACACCACC...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGCCGGAAGGTGGTGTaGGGCAGTTGGGTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGRKVV*GSWVIW
Trigger: CCAGATCACCCAACTGCCCAACACCACCTTCCGGCC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTTCCACGCTGCGCAGGTaGGGCATGGGCCGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RSCLLQMCFKQLAVVERISTLRR*GMGRKV
Trigger: CACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGGA...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGAGCGCCTGCAGCTTGTaGTACGAGAGGTCCACGCTG +
Preference number: 5 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKSACSL*YERSTL
Trigger: CAGCGTGGACCTCTCGTACAACAAGCTGCAGGCGCT...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCGAGCGCCTGCAGCTaGTTGTACGAGAGGTCCACG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYASACS*LYERST
Trigger: CGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp ATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGCCGATGTCGAGAAACTaGAGGCTGCGGCAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ILPEICVYLLGKLGRNNKPMSRN*RLRQSW
Trigger: CCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGG...CTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGTGCCCGTGACCACCTaGTGGATCTGCACGGCGTTC +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYVPVTT*WICTAF
Trigger: GAACGCCGTGCAGATCCACAAGGTGGTCACGGGCAC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp GCTCTTAGAAGATCTAGCAGATATATGCTGCGGATGAGAGGTCTGCTCAGAGAATTTCATCCCAGTTCTTaGGGGTTGGTGGCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: ALRRSSRYMLRMRGLLREFHPSS*GLVAPD
Trigger: ATCCGGGGCCACCAACCCCAAAGAACTGGGATGAAA...TTCTCTGAGCAGACCTCTCATCCGCAGCATATATCTGCTAGATCTTCTAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGCACAATGTCTCACTTaGCTGCTCGGCTCGGGGCTG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYAQCLT*LLGSGL
Trigger: CAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp CCAGAGATCTGTGTGTACTTGCTTGGAAAACTTGGGAGGAATAACAAGTGGCATGGTGGTGTTGGGCAGTaGGGTGATCTGGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: PEICVYLLGKLGRNNKWHGGVGQ*GDLVGT
Trigger: AGTTCCAACCAGATCACCCAACTGCCCAACACCACC...ATGCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATAAGCCGGCGAAAGAGTaGCGCGCCAGACTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYKPAKE*RARLLS
Trigger: GCTCAAGAGTCTGGCGCGCAACTCTTTCGCCGGCTT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACCACAATGGCCACCTaGTTCCTCCGCAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTTMAT*FLRRQS
Trigger: GCTCTGCCTGCGGAGGAACAAGGTGGCCATTGTGGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TCCCAGATTGCAGATTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: SQIADSSFQWFFMKCVWTAAQAY*VAHGLR
Trigger: TCTCAACCCATGCGCTACCAAATACGCCTGGGCAGC...AGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAATCTGCAATCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp GAACACTGTTTCTCATGGGCCGACAGATATGGGACCACAGTAGTAGCCTTTGTGATGTGTTGCTGGATTTaGCTGCAGTTCAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: EHCFSWADRYGTTVVAFVMCCWI*LQFSAA
Trigger: AGCAGCACTGAACTGCAGCAAAATCCAGCAACACAT...CACAAAGGCTACTACTGTGGTCCCATATCTGTCGGCCCATGAGAAACAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TGCAAATGGAGGGTCAATCCATCACAATGCCCAGGACGAGACGTGAATTGTGGCACTTGCTTGGAAAACTaGGGAGGAATAACAAGTGGC +
Preference number: 5 (lower is better)
Translates to: CKWRVNPSQCPGRDVNCGTCLEN*GGITSG
Trigger: GCCACTTGTTATTCCTCCCAAGTTTTCCAAGCAAGT...GCCACAATTCACGTCTCGTCCTGGGCATTGTGATGGATTGACCCTCCATTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATACCTTGACCAAGTCGTaGTGCTCGAGGTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYTLTKS*CSRCSS
Trigger: CGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGT...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGATGGGCGAAGTTCACCTaGACCAAGTCGTTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRWAKFT*TKSLCS
Trigger: CGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCA...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATTTGGTAGCGCATGGGTaGAGAGCCACTGGGACAATC +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHLVAHG*RATGTI
Trigger: GATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAA...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TGTGTAGACAACGTTTGCTTGCCTACAAAGACACACAACGCAGAAACATACAGATTGGTAGCGCATGGGTaGAGAGCCACTGGGACAATC +
Preference number: 5 (lower is better)
Translates to: CVDNVCLPTKTHNAETYRLVAHG*RATGTI
Trigger: GATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAA...TCTGTATGTTTCTGCGTTGTGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS CCA 90 bp AATCCATTAGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATTaGAAGCGCTCGGTCAGAAATCCTTTTCCAGAGAGTGACAACCTC +
Preference number: 5 (lower is better)
Translates to: NPLARIFPERLENVH*KRSVRNPFPESDNL
Trigger: GAGGTTGTCACTCTCTGGAAAAGGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCTAATGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CCA 90 bp AATCCATTAGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATTaGAAGCGCTCGGTCAGAAATAATGTCTCACTTTGCTGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: NPLARIFPERLENVH*KRSVRNNVSLCCSA
Trigger: AGCCGAGCAGCAAAGTGAGACATTATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCTAATGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452811.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGTGGTGTTGGGCAGTaGGGTGATCTGGTTGGAACT +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGGVGQ*GDLVGT
Trigger: AGTTCCAACCAGATCACCCAACTGCCCAACACCACC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATATGGTCTGTTTCTGCTTTaGCTTCCTGCGCTGCGTGAC +
Preference number: 5 (lower is better)
Translates to: SQIPEYGQIFKGRKEFSYGLFLL*LPALRD
Trigger: GTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGACC...ATATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp ACTCTCAGATTCCTGAATATGGACAGATCTTCAAAGGGAGGAAGGAGTTCTCATACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: TLRFLNMDRSSKGGRSSHTGECP*EALGQK
Trigger: TTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGT...ATGAGAACTCCTTCCTCCCTTTGAAGATCTGTCCATATTCAGGAATCTGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS-3UTR CAA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACAACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTTNWMA*ARICSV
Trigger: CACGCTGCATATGCGGGCCAACGCCATCCAGTTTGT...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTAGGGACTTCCAAGAGTaGAGGATCCGGGGCTCGATG +
Preference number: 5 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIRDFQE*RIRGSM
Trigger: CATCGAGCCCCGGATCCTCAACTCTTGGAAGTCCCT...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TTGACATTCTGTCAATGGCAGACCCAAATCAGCCAACATCGCCACTCATCTAGAGGGGGCTCTTCTACTTaGATGAGTTCAGAAGAATAT +
Preference number: 5 (lower is better)
Translates to: LTFCQWQTQISQHRHSSRGGSST*MSSEEY
Trigger: ATATTCTTCTGAACTCATCAAAGTAGAAGAGCCCCC...TCTAGATGAGTGGCGATGTTGGCTGATTTGGGTCTGCCATTGACAGAATGTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp CACAAGTGGCCCCTAATCCTACCAGAGATCTGTGTGTACTTGCTTGGAAAACTTTCTGTGTGTACTTGCTaGGAAAACTTGGGAGGAATA +
Preference number: 5 (lower is better)
Translates to: HKWPLILPEICVYLLGKLSVCTC*ENLGGI
Trigger: TATTCCTCCCAAGTTTTCCAAGCAAGTACACACAGA...AAGTTTTCCAAGCAAGTACACACAGATCTCTGGTAGGATTAGGGGCCACTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp GATGCTAAATCATACCAAATGTCTGCCTTCTTGAAGGCAGAGAGAAAAGGTTGGGAGATCTGTGTGTACTaGCTTGGAAAACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: DAKSYQMSAFLKAERKGWEICVY*LGKLGR
Trigger: CCTCCCAAGTTTTCCAAGCAAGTACACACAGATCTC...CCAACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTGGTATGATTTAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTAGTTGGGTGATCTGGTaGGAACTCAGCGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: RSCLLQMCFKQLAVVERISWVIW*ELSVSS
Trigger: GGAACTCACGCTGAGTTCCAACCAGATCACCCAACT...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp AGACTAGGCATCAAACTTGCTGACAAGTCGACTAAAATAAGCCGGAAACACAAGCAAATGTCTGCCTTCTaGAAGGCAGAGAGAAAAGGT +
Preference number: 5 (lower is better)
Translates to: RLGIKLADKSTKISRKHKQMSAF*KAERKG
Trigger: ACCTTTTCTCTCTGCCTTCAAGAAGGCAGACATTTG...CTTGTGTTTCCGGCTTATTTTAGTCGACTTGTCAGCAAGTTTGATGCCTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACAACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTTGECP*EALGQK
Trigger: TTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGT...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp AGTATAGGCTGCATTGTGGGTAGGTGGTCTCAACTATTAATATCAAGGCTAAGATTGTGTAGACAACGTTaGCTTGCCTACAAAGACACA +
Preference number: 5 (lower is better)
Translates to: SIGCIVGRWSQLLISRLRLCRQR*LAYKDT
Trigger: TGTGTCTTTGTAGGCAAGCAAACGTTGTCTACACAA...TCTTAGCCTTGATATTAATAGTTGAGACCACCTACCCACAATGCAGCCTATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTCTGTCAGTGAAGGCATaGAACTACAGAGAAGATTCA +
Preference number: 5 (lower is better)
Translates to: RSCLLQMCFKQLAVVERILSVKA*NYREDS
Trigger: TGAATCTTCTCTGTAGTTCAATGCCTTCACTGACAG...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp AGAAGCTGTTTATTACAGATGTGCTTCAAACAGCTGGCAGTTGTTGAAAGAATTCCACACTCATACTTTTaGAGCCAAACTGTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: RSCLLQMCFKQLAVVERIPHSYF*SQTVSE
Trigger: TTCACTGACAGTTTGGCTCAAAAAGTATGAGTGTGG...AATTCTTTCAACAACTGCCAGCTGTTTGAAGCACATCTGTAATAAACAGCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417012.5
CDS-3UTR CAA 90 bp TTCCTCTTTCCAATGGTTCTTCATGAAATGCGTATGGACTTAAGATCTTCTACATTCTATGGTCATCATTaGCTCTTAAGCTCCCAGATT +
Preference number: 5 (lower is better)
Translates to: FLFPMVLHEMRMDLRSSTFYGHH*LLSSQI
Trigger: AATCTGGGAGCTTAAGAGCAAATGATGACCATAGAA...TGTAGAAGATCTTAAGTCCATACGCATTTCATGAAGAACCATTGGAAAGAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433224.1
CDS CAA 90 bp CCATTCGCGCCCCGGGCAGCTGCAGAGAGCGGGCTCACTCATGCTTaGCGGGCGGCGGGCGGCGGGCGGCGGGCGGTGGGGAGGTGCGGA +
Preference number: 6 (lower is better)
Translates to: PFAPRAAAESGLTHA*RAAGGGRRAVGRCG
Trigger: TCCGCACCTCCCCACCGCCCGCCGCCCGCCGCCCGCCGCCCGCAAAGCATGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS GCA 72 bp CGCCGCCTGGAAGAGCCACGGTGGCAGGCTCGAATGTaGCGTCGTGCTGCCCCTCCCCGCCGTCCGCGAGCG +
Preference number: 6 (lower is better)
Translates to: RRLEEPRWQARM*RRAAPPRRPRA
Trigger: CGCTCGCGGACGGCGGGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp GGAAGAGCCACGGTGGCAGGCTCGAATGTGCCGTCGTaGTGCCCCTCCCCGCCGTCCGCGAGCGTGGTGGCC +
Preference number: 6 (lower is better)
Translates to: GRATVAGSNVPS*CPSPPSASVVA
Trigger: GGCCACCACGCTCGCGGACGGCGGGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCACCGTGGCTCTTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp GTGGCCGAGCTGGCAGGGGGCCCCAGATCACTGCGGTaGGTGACGGCCGAGAGCAGGTGGCCGCTGGTGGGC +
Preference number: 6 (lower is better)
Translates to: VAELAGGPRSLR*VTAESRWPLVG
Trigger: GCCCACCAGCGGCCACCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGGGCCCCCTGCCAGCTCGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp CCCGGTCCGCGGCCGGCGGATCTGGCAGGCGCACAATGTCTCACTTaGCTGCTCGGCTCGGGGCTGCAAGGGCGGCCGGCAAGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: PGPRPADLAGAQCLT*LLGSGLQGRPARRG
Trigger: TCCCCGCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCCGCGGACCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp TGGCCGCTGGTGGGCTCGGCCCCATCCTCGCACAGGTaGAAGGCGTACACGGCGTCCAGGACGTCCTCGCCC +
Preference number: 6 (lower is better)
Translates to: WPLVGSAPSSHR*KAYTASRTSSP
Trigger: GGGCGAGGACGTCCTGGACGCCGTGTACGCCTTCCACCTGTGCGAGGATGGGGCCGAGCCCACCAGCGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp GACAAGCCCAGCAGGCCGGACAGGTTGTGGGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGCAGCCGCCCCTCGCACCGGCACAGC +
Preference number: 6 (lower is better)
Translates to: DKPSRPDRLWGASVR*SASQYSSRPSHRHS
Trigger: GCTGTGCCGGTGCGAGGGGCGGCTGCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCTGCTGGGCTTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000415098.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 72 bp CCGCGGAAACAGCCTGCCATTCGCGCCCCGGGCAGCTaGAGAGAGCGGGCTCACTCATGCTTTGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PRKQPAIRAPGS*RERAHSCFAGG
Trigger: GCCGCCCGCAAAGCATGAGTGAGCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS CCA 72 bp CCCAGATCACTGCGGTTGGTGACGGCCGAGAGCAGGTaGCCGCTGGTGGGCTCGGCCCCATCCTCGCACAGG +
Preference number: 6 (lower is better)
Translates to: PRSLRLVTAESR*PLVGSAPSSHR
Trigger: CCTGTGCGAGGATGGGGCCGAGCCCACCAGCGGCCACCTGCTCTCGGCCGTCACCAACCGCAGTGATCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp CGTTCTCGGCGTGCTCGCCGCCTGGAAGAGCCACGGTaGCAGGCTCGAATGTGCCGTCGTGCTGCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: RSRRARRLEEPR*QARMCRRAAPP
Trigger: GGGAGGGGCAGCACGACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp CGGCCGGCGGATCTGGCAGGCGCACAATGTCTCACTTaGCTGCTCGGCTCGGGGCTGCAAGGGCGGCCGGCA +
Preference number: 6 (lower is better)
Translates to: RPADLAGAQCLT*LLGSGLQGRPA
Trigger: TGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp AGCAGGCCGGACAGGTTGTGGGGCGCCTCGGTGAGGTaGAGCGCCTCGCAGTACAGCAGCCGCCCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: SRPDRLWGASVR*SASQYSSRPSH
Trigger: GTGCGAGGGGCGGCTGCTGTACTGCGAGGCGCTCAACCTCACCGAGGCGCCCCACAACCTGTCCGGCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000415098.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CAA 90 bp CCCCAGCCTGGTGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGAGCCACTGGGACAATCACACCTCGC +
Preference number: 6 (lower is better)
Translates to: PQPGARRPVPAAQAY*VAHGLRATGTITPR
Trigger: GCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACCAGGCTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp AGCGGCGCCCGGGCTCCTTCCCTCCACCAGGCAGTGTaGGGCGCGAGCTTGCACAGGCACCTACTGCTCACT +
Preference number: 6 (lower is better)
Translates to: SGARAPSLHQAV*GASLHRHLLLT
Trigger: AGTGAGCAGTAGGTGCCTGTGCAAGCTCGCGCCGCACACTGCCTGGTGGAGGGAAGGAGCCCGGGCGCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295057.4
CDS GCA 72 bp CTGACCGGCGCCACCTTTTACTCCGCGGAAACAGCCTaGCATTCGCGCCCCGGGCAGCTGCAGAGAGCGGGC +
Preference number: 6 (lower is better)
Translates to: LTGATFYSAETA*HSRPGQLQRAG
Trigger: GCCCGCTCTCTGCAGCTGCCCGGGGCGCGAATGGCAGGCTGTTTCCGCGGAGTAAAAGGTGGCGCCGGTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS GCA 72 bp CGGCGGATCTGGCAGGCGCACAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAGGGCGGCCGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: RRIWQAHNVSLC*SARGCKGGRQG
Trigger: GCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp GGCCGGCGGATCTGGCAGGCGCACAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGCAAGGGCGGCCGGCAA +
Preference number: 6 (lower is better)
Translates to: GRRIWQAHNVSL*CSARGCKGGRQ
Trigger: TTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp TTCCGCAGCCCGTGGAAGAGGTCGGGCGCGAGCGCCTaGAGCTTGTTGTACGAGAGGTCCACGCTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: FRSPWKRSGASA*SLLYERSTLRR
Trigger: CCTGCGCAGCGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGCGCCCGACCTCTTCCACGGGCTGCGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 72 bp GTGACCACCTTGTGGATCTGCACGGCGTTCTCGGCGTaGTCGCCGCCTGGAAGAGCCACGGTGGCAGGCTCG +
Preference number: 6 (lower is better)
Translates to: VTTLWICTAFSA*SPPGRATVAGS
Trigger: CGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp GTTTCCGAGGCAGCCCCGGTCCGCGGCCGGCGGATCTaGCAGGCGCACAATGTCTCACTTTGCTGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: VSEAAPVRGRRI*QAHNVSLCCSA
Trigger: AGCCGAGCAGCAAAGTGAGACATTGTGCGCCTGCCAGATCCGCCGGCCGCGGACCGGGGCTGCCTCGGAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000415098.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp GCCCGCATATGCAGCGTGGTGAGCTTCCGCAGCCCGTaGAAGAGGTCGGGCGCGAGCGCCTGCAGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: ARICSVVSFRSP*KRSGASACSLL
Trigger: CAACAAGCTGCAGGCGCTCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CCA 72 bp CGTCCAGGACGTCCTCGCCCTGTGCGTACTCCGGGCTaGCGCACTGCAAGTTGCCATCGTAGCGCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: RPGRPRPVRTPG*RTASCHRSAPG
Trigger: TCCAGGGGCGCTACGATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTCCTGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp GTGGATCTGCACGGCGTTCTCGGCGTGCTCGCCGCCTaGAAGAGCCACGGTGGCAGGCTCGAATGTGCCGTC +
Preference number: 6 (lower is better)
Translates to: VDLHGVLGVLAA*KSHGGRLECAV
Trigger: GACGGCACATTCGAGCCTGCCACCGTGGCTCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCAC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp GGTGCCCGCCGGCCCGTCCCGGCTGCCCAGGCGTATTaGGTAGCGCATGGGTTGAGAGCCACTGGGACAATC +
Preference number: 6 (lower is better)
Translates to: GARRPVPAAQAY*VAHGLRATGTI
Trigger: GATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCGGGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp CGCCGGCCCGTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTaGAGAGCCACTGGGACAATCACACCTCGCATTCCCTCGCGGGCT +
Preference number: 6 (lower is better)
Translates to: RRPVPAAQAYLVAHG*RATGTITPRIPSRA
Trigger: AGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGACGGGCCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp GAAGGCGTACACGGCGTCCAGGACGTCCTCGCCCTGTaGGTACTCCGGGCTGGCGCACTGCAAGTTGCCATC +
Preference number: 6 (lower is better)
Translates to: EGVHGVQDVLAL*VLRAGALQVAI
Trigger: GATGGCAACTTGCAGTGCGCCAGCCCGGAGTACGCACAGGGCGAGGACGTCCTGGACGCCGTGTACGCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 72 bp CAAACTGGATGGCGTTGGCCCGCATATGCAGCGTGGTaGGCTTCCGCAGCCCGTGGAAGAGGTCGGGCGCGA +
Preference number: 6 (lower is better)
Translates to: QTGWRWPAYAAW*ASAARGRGRAR
Trigger: TCGCGCCCGACCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 72 bp CGCACGGGCACAAACTGGATGGCGTTGGCCCGCATATaGAGCGTGGTGAGCTTCCGCAGCCCGTGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RTGTNWMALARI*SVVSFRSPWKR
Trigger: CCTCTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS GCA 72 bp ATGAGGGCCATGGTGCCCGTGACCACCTTGTGGATCTaGACGGCGTTCTCGGCGTGCTCGCCGCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: MRAMVPVTTLWI*TAFSACSPPGR
Trigger: TCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp GAGAAGATGAGGGCCATGGTGCCCGTGACCACCTTGTaGATCTGCACGGCGTTCTCGGCGTGCTCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: EKMRAMVPVTTL*ICTAFSACSPP
Trigger: AGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCATCTTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp GCGAGCGCCTGCAGCTTGTTGTACGAGAGGTCCACGCTGCGCAGGTaGGGCATGGGCCGGAAGGTGGTGTTGGGCAGTTGGGTGATCTGG +
Preference number: 6 (lower is better)
Translates to: ASACSLLYERSTLRR*GMGRKVVLGSWVIW
Trigger: CCAGATCACCCAACTGCCCAACACCACCTTCCGGCCCATGCCCAACCTGCGCAGCGTGGACCTCTCGTACAACAAGCTGCAGGCGCTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CAA 90 bp CTGCGGCAGTCCTGGAAGATGCGCACGGGCACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTGGTGAGCTTCCGCAGCCCGTGGAAG +
Preference number: 6 (lower is better)
Translates to: LRQSWKMRTGTNWMA*ARICSVVSFRSPWK
Trigger: CTTCCACGGGCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp AGGCGACTTCTAGGACCCGCAAGTTTCCCAACTACGTaGCGGAGCCCGAGCTTCGCCTTCCTGCCGCCTTCC +
Preference number: 6 (lower is better)
Translates to: RRLLGPASFPTT*RSPSFAFLPPS
Trigger: GGAAGGCGGCAGGAAGGCGAAGCTCGGGCTCCGGCACGTAGTTGGGAAACTTGCGGGTCCTAGAAGTCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000433224.1
ENST00000452811.1
CDS CCA 72 bp CTGCGGCAGTCCTGGAAGATGCGCACGGGCACAAACTaGATGGCGTTGGCCCGCATATGCAGCGTGGTGAGC +
Preference number: 6 (lower is better)
Translates to: LRQSWKMRTGTN*MALARICSVVS
Trigger: GCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp TGGAAGTTGTTGAGCCACGAGGCTAGGGCACACACGTaGCGCCCGCAATCCCACAGGTTCCCGGCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: WKLLSHEARAHT*RPQSHRFPARV
Trigger: CACCCTGGCCGGGAACCTGTGGGATTGCGGGCGCAACGTGTGTGCCCTAGCCTCGTGGCTCAACAACTTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp AAGGAGAAGATGAGGGCCATGGTGCCCGTGACCACCTaGTGGATCTGCACGGCGTTCTCGGCGTGCTCGCCG +
Preference number: 6 (lower is better)
Translates to: KEKMRAMVPVTT*WICTAFSACSP
Trigger: CGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCATCTTCTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp TCCAGGTTCCAAACCCAGTCCAGCGAGCTGACCACAATGGCCACCTaGTTCCTCCGCAGGCAGAGCGAGTGCAGGGAGATGAGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SRFQTQSSELTTMAT*FLRRQSECREMRRG
Trigger: CCCGCGCCTCATCTCCCTGCACTCGCTCTGCCTGCGGAGGAACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGGTTTGGAACCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp ACGATGAGGAAGGAGAAGATGAGGGCCATGGTGCCCGTGACCACCTaGTGGATCTGCACGGCGTTCTCGGCGTGCTCGCCGCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: TMRKEKMRAMVPVTT*WICTAFSACSPPGR
Trigger: TCTTCCAGGCGGCGAGCACGCCGAGAACGCCGTGCAGATCCACAAGGTGGTCACGGGCACCATGGCCCTCATCTTCTCCTTCCTCATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 72 bp ACTGCAAGTTGCCATCGTAGCGCCCCTGGAAGTTGTTaGGCCACGAGGCTAGGGCACACACGTTGCGCCCGC +
Preference number: 6 (lower is better)
Translates to: TASCHRSAPGSC*ATRLGHTRCAR
Trigger: GCGGGCGCAACGTGTGTGCCCTAGCCTCGTGGCTCAACAACTTCCAGGGGCGCTACGATGGCAACTTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp TGGAAGCGCTCGGTCAGAAATAATGTCTCACTTTGCTaGTCGGCTCGGGGCTGCAAGGGCGGCCGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: WKRSVRNNVSLC*SARGCKGGRQG
Trigger: GCCTTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTATTTCTGACCGAGCGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452811.1
CDS CAA 72 bp TCCTGGAAGATGCGCACGGGCACAAACTGGATGGCGTaGGCCCGCATATGCAGCGTGGTGAGCTTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SWKMRTGTNWMA*ARICSVVSFRS
Trigger: GCTGCGGAAGCTCACCACGCTGCATATGCGGGCCAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CAA 90 bp CACGCTGCGCAGGTTGGGCATGGGCCGGAAGGTGGTGTTGGGCAGTaGGGTGATCTGGTTGGAACTCAGCGTGAGTTCCTTAACTCGGCG +
Preference number: 6 (lower is better)
Translates to: HAAQVGHGPEGGVGQ*GDLVGTQREFLNSA
Trigger: CGCCGAGTTAAGGAACTCACGCTGAGTTCCAACCAGATCACCCAACTGCCCAACACCACCTTCCGGCCCATGCCCAACCTGCGCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CCA 72 bp TGCAGGGACTGCAGGTGCGGCACGGTCTCGAACACATaGGGCTCCATGTACTCGATCTCGTTGCCCGACAAG +
Preference number: 6 (lower is better)
Translates to: CRDCRCGTVSNT*GSMYSISLPDK
Trigger: CTTGTCGGGCAACGAGATCGAGTACATGGAGCCCCATGTGTTCGAGACCGTGCCGCACCTGCAGTCCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp CCAGGCGTATTTGGTAGCGCATGGGTTGAGAGCCACTaGGACAATCACACCTCGCATTCCCTCGCGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PGVFGSAWVESH*DNHTSHSLAGC
Trigger: GCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp AGGGAGATGAGGCGCGGGAAGTGGGCGAAGTTCACCTaGACCAAGTCGTTGTGCTCGAGGTGCAGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: REMRRGKWAKFT*TKSLCSRCSSV
Trigger: CACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCATCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp CAAACCCAGTCCAGCGAGCTGACCACAATGGCCACCTaGTTCCTCCGCAGGCAGAGCGAGTGCAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: QTQSSELTTMAT*FLRRQSECREM
Trigger: CATCTCCCTGCACTCGCTCTGCCTGCGGAGGAACAAGGTGGCCATTGTGGTCAGCTCGCTGGACTGGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp GTCCCGGCTGCCCAGGCGTATTTGGTAGCGCATGGGTaGAGAGCCACTGGGACAATCACACCTCGCATTCCC +
Preference number: 6 (lower is better)
Translates to: VPAAQAYLVAHG*RATGTITPRIP
Trigger: GGGAATGCGAGGTGTGATTGTCCCAGTGGCTCTCAACCCATGCGCTACCAAATACGCCTGGGCAGCCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp CACTGGGACAATCACACCTCGCATTCCCTCGCGGGCTaGTGGTGGCAGGTACACGAGCCATACTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: HWDNHTSHSLAG*WWQVHEPYSLM
Trigger: CATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp CATTGGAAGCGCTCGGTCAGAAATAATGTCTCACTTTaGTGCTCGGCTCGGGGCTGCAAGGGCGGCCGGCAA +
Preference number: 6 (lower is better)
Translates to: HWKRSVRNNVSL*CSARGCKGGRQ
Trigger: TTGCCGGCCGCCCTTGCAGCCCCGAGCCGAGCAGCAAAGTGAGACATTATTTCTGACCGAGCGCTTCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452811.1
CDS CAA 72 bp GCGGGCTGCTGGTGGCAGGTACACGAGCCATACTCGTaGATGATCACCAGGGCTCCCTCAATGTGGTTCGGT +
Preference number: 6 (lower is better)
Translates to: AGCWWQVHEPYS*MITRAPSMWFG
Trigger: ACCGAACCACATTGAGGGAGCCCTGGTGATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp AGCGAGTGCAGGGAGATGAGGCGCGGGAAGTGGGCGAAGTTCACCTaGACCAAGTCGTTGTGCTCGAGGTGCAGCTCGGTGAGCTTAAAC +
Preference number: 6 (lower is better)
Translates to: SECREMRRGKWAKFT*TKSLCSRCSSVSLN
Trigger: GTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCATCTCCCTGCACTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp GAGATGAGGCGCGGGAAGTGGGCGAAGTTCACCTTGACCAAGTCGTaGTGCTCGAGGTGCAGCTCGGTGAGCTTAAACAAGCCGGCGAAA +
Preference number: 6 (lower is better)
Translates to: EMRRGKWAKFTLTKS*CSRCSSVSLNKPAK
Trigger: TTTCGCCGGCTTGTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCCGCGCCTCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp ATGGGCCGGAAGGTGGTGTTGGGCAGTTGGGTGATCTaGTTGGAACTCAGCGTGAGTTCCTTAACTCGGCGC +
Preference number: 6 (lower is better)
Translates to: MGRKVVLGSWVI*LELSVSSLTRR
Trigger: GCGCCGAGTTAAGGAACTCACGCTGAGTTCCAACCAGATCACCCAACTGCCCAACACCACCTTCCGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
ENST00000452811.1
CDS CCA 72 bp GACAATCACACCTCGCATTCCCTCGCGGGCTGCTGGTaGCAGGTACACGAGCCATACTCGTTGATGATCACC +
Preference number: 6 (lower is better)
Translates to: DNHTSHSLAGCW*QVHEPYSLMIT
Trigger: GGTGATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp TGGGACAATCACACCTCGCATTCCCTCGCGGGCTGCTaGTGGCAGGTACACGAGCCATACTCGTTGATGATC +
Preference number: 6 (lower is better)
Translates to: WDNHTSHSLAGC*WQVHEPYSLMI
Trigger: GATCATCAACGAGTATGGCTCGTGTACCTGCCACCAGCAGCCCGCGAGGGAATGCGAGGTGTGATTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS GCA 72 bp GGGAAGTGGGCGAAGTTCACCTTGACCAAGTCGTTGTaGTCGAGGTGCAGCTCGGTGAGCTTAAACAAGCCG +
Preference number: 6 (lower is better)
Translates to: GKWAKFTLTKSL*SRCSSVSLNKP
Trigger: CGGCTTGTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp TATCCGATGTCGAGAAACTTGAGGCTGCGGCAGTCCTaGAAGATGCGCACGGGCACAAACTGGATGGCGTTG +
Preference number: 6 (lower is better)
Translates to: YPMSRNLRLRQS*KMRTGTNWMAL
Trigger: CAACGCCATCCAGTTTGTGCCCGTGCGCATCTTCCAGGACTGCCGCAGCCTCAAGTTTCTCGACATCGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp CGCGGGAAGTGGGCGAAGTTCACCTTGACCAAGTCGTaGTGCTCGAGGTGCAGCTCGGTGAGCTTAAACAAG +
Preference number: 6 (lower is better)
Translates to: RGKWAKFTLTKS*CSRCSSVSLNK
Trigger: CTTGTTTAAGCTCACCGAGCTGCACCTCGAGCACAACGACTTGGTCAAGGTGAACTTCGCCCACTTCCCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS CAA 90 bp CTGGGCAGACATGGCAGCCATCTGATGCATGGTCTGTTTCTGCTTTaGCTTCCTGCGCTGCGTGACAAAGCACTGTCTGAGCTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: LGRHGSHLMHGLFLL*LPALRDKALSELPE
Trigger: CTCAGGCAGCTCAGACAGTGCTTTGTCACGCAGCGCAGGAAGCAAAAGCAGAAACAGACCATGCATCAGATGGCTGCCATGTCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 72 bp AAGCCGGCGAAAGAGTTGCGCGCCAGACTCTTGAGCTaGTTGTATCCGATGTCGAGAAACTTGAGGCTGCGG +
Preference number: 6 (lower is better)
Translates to: KPAKELRARLLS*LYPMSRNLRLR
Trigger: CCGCAGCCTCAAGTTTCTCGACATCGGATACAATCAGCTCAAGAGTCTGGCGCGCAACTCTTTCGCCGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000416268.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 72 bp ACAGTCTGGTTAATGTCCGTCATTGGAAACGACCACTaGCCGGCGCCACCTTTTACTCCGCGGAAACAGCCT +
Preference number: 6 (lower is better)
Translates to: TVWLMSVIGNDH*PAPPFTPRKQP
Trigger: AGGCTGTTTCCGCGGAGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAATGACGGACATTAACCAGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS CCA 72 bp TCCCCAGGATCTGACAGTCTGGTTAATGTCCGTCATTaGAAACGACCACTGACCGGCGCCACCTTTTACTCC +
Preference number: 6 (lower is better)
Translates to: SPGSDSLVNVRH*KRPLTGATFYS
Trigger: GGAGTAAAAGGTGGCGCCGGTCAGTGGTCGTTTCCAATGACGGACATTAACCAGACTGTCAGATCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295057.4
ENST00000433224.1
CDS TCA 72 bp AAGCGCTCGGTCAGAAATCCACCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGCTCCCTTTGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: KRSVRNPPFSRE*QPPFSCSLCVQ
Trigger: CTGCACACAAAGGGAGCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGGTGGATTTCTGACCGAGCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409148.1
CDS GCA 72 bp CATTCAGCTGCTCCCTTTGTGTGCAGGCTAATTATATaGAGGGCGAGAGAAGACCCCTCTGTGTTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: HSAAPFVCRLII*RAREDPSVFPR
Trigger: CCTCGGAAACACAGAGGGGTCTTCTCTCGCCCTGCATATAATTAGCCTGCACACAAAGGGAGCAGCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295057.4
ENST00000409148.1
ENST00000415098.1
ENST00000417012.5
ENST00000433224.1
CDS TCA 72 bp TTGGAAGCGCTCGGTCAGAAATCCTTTTCCAGAGAGTaGCAACCTCCATTCAGCTGCTCCCTTTGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LEALGQKSFSRE*QPPFSCSLCVQ
Trigger: CTGCACACAAAGGGAGCAGCTGAATGGAGGTTGTCACTCTCTGGAAAAGGATTTCTGACCGAGCGCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CCA 72 bp GTTCACAGCCACGGAAAGATCAAAGAGATGGTGATTTaGTCCATGTTAGATGCGGCGCCACCTTTTACTCCG +
Preference number: 6 (lower is better)
Translates to: VHSHGKIKEMVI*SMLDAAPPFTP
Trigger: CGGAGTAAAAGGTGGCGCCGCATCTAACATGGACCAAATCACCATCTCTTTGATCTTTCCGTGGCTGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416268.1
CDS CAA 72 bp AGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAATCCACCCTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: SENLSRETGECP*EALGQKSTLFQ
Trigger: CTGGAAAAGGGTGGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409148.1
CDS CAA 72 bp AGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAATCCTTTTCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: SENLSRETGECP*EALGQKSFSRE
Trigger: CTCTCTGGAAAAGGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295057.4
ENST00000417012.5
ENST00000433224.1
CDS CAA 72 bp AGTTCACAGCCACGGAAAGATCAAAGAGATGGTGATTaGGTCCATGTTAGATGCGGCGCCACCTTTTACTCC +
Preference number: 6 (lower is better)
Translates to: SSQPRKDQRDGD*VHVRCGATFYS
Trigger: GGAGTAAAAGGTGGCGCCGCATCTAACATGGACCAAATCACCATCTCTTTGATCTTTCCGTGGCTGTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416268.1
CDS CAA 72 bp AGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAATCTCTAAGCATGCAG +
Preference number: 6 (lower is better)
Translates to: SENLSRETGECP*EALGQKSLSMQ
Trigger: CTGCATGCTTAGAGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415098.1
ENST00000416268.1
CDS CAA 90 bp AAATCCATTAGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAATCTCTAAGCATGCAGAAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: KSISENLSRETGECP*EALGQKSLSMQKAG
Trigger: CCCAGCTTTCTGCATGCTTAGAGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCTAATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416268.1
CDS CAA 90 bp AAATCCATTAGCGAGAATCTTTCCAGAGAGACTGGAGAATGTCCATaGGAAGCGCTCGGTCAGAAATCTCTAAGCATGCAGAAAGCCACC +
Preference number: 6 (lower is better)
Translates to: KSISENLSRETGECP*EALGQKSLSMQKAT
Trigger: GGTGGCTTTCTGCATGCTTAGAGATTTCTGACCGAGCGCTTCCAATGGACATTCTCCAGTCTCTCTGGAAAGATTCTCGCTAATGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415098.1