Pregenerated sensors for LRRN4CL (Homo sapiens)
Ensembl gene IDs: ENSG00000177363Ensembl transcript IDs: ENST00000317449.5
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTaGAGCCTGGGGCTGGCTCCCAGCTCGCCGTCCAGCCCTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LNKRSVLRTMTPPWP*SLGLAPSSPSSPPW Trigger: CCAGGGAGGGCTGGACGGCGAGCTGGGAGCCAGCCCCAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGCCGTCCAGCCCTCCCTaGAGGCAGCGGGTTTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLPSSPP*RQRVFL Trigger: GAGGAAAACCCGCTGCCTCCAGGGAGGGCTGGACGG...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCCTGGAGCCTGGGGCTaGCTCCCAGCTCGCCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: PRPQPGNKAPSTGPKQALPGAWG*LPARRP Trigger: TGGACGGCGAGCTGGGAGCCAGCCCCAGGCTCCAGG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR GCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTAAGGTGGGGCTGTCTGTaGCCGAGATGCCCCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLRWGCL*PRCPQA Trigger: GGCCTGGGGGCATCTCGGGCACAGACAGCCCCACCT...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGACCATGACTCCGCCGTaGCCCTGGAGCCTGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SFPDLSQETKRQVPDLNKTMTPP*PWSLGL Trigger: CAGCCCCAGGCTCCAGGGCCACGGCGGAGTCATGGT...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR TCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTAAGGTGGACGTTGCAGTaGGCTGAGATGGCGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLRWTLQ*AEMAPL Trigger: CAATGGCGCCATCTCAGCTCACTGCAACGTCCACCT...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR TCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTAAGCCTGACAACATGGTaGAACCCCGTCTCTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLSLTTW*NPVSTK Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGTCAGGCT...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTACTGGCTGTGTTGCCCTaGCTGGACTGGACTCCAACT | + |
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Preference number: 2 (lower is better) Translates to: EATHSDRAIFRVHDMDQLLAVLP*LDWTPT Trigger: AGTTGGAGTCCAGTCCAGCCAGGGCAACACAGCCAG...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAAGCCTCCGGAGTAGCTaGGACTACAGGTACCCACCA | + |
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Preference number: 2 (lower is better) Translates to: EATHSDRAIFRVHDMDQLSLRSS*DYRYPP Trigger: TGGTGGGTACCTGTAGTCCCAGCTACTCCGGAGGCT...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR CCA 72 bp | CGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTaGAGCCTGGGGCTGGCTCCCAGCTCGCCGTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RSVLRTMTPPWP*SLGLAPSSPSS Trigger: GCTGGACGGCGAGCTGGGAGCCAGCCCCAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR CCA 72 bp | GGCTGTGTTGCCCTGGCTGGACTGGACTCCAACTCCTaGGCTCAAGAGATCCTCCCATTTCAGCCTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: GCVALAGLDSNS*AQEILPFQPLE Trigger: CTCCAGAGGCTGAAATGGGAGGATCTCTTGAGCCCAGGAGTTGGAGTCCAGTCCAGCCAGGGCAACACAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR CCA 72 bp | AAACAAGGGCGTCTGGCTGTGTTGCCCTGGCTGGACTaGACTCCAACTCCTGGGCTCAAGAGATCCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: KQGRLAVLPWLD*TPTPGLKRSSH Trigger: ATGGGAGGATCTCTTGAGCCCAGGAGTTGGAGTCCAGTCCAGCCAGGGCAACACAGCCAGACGCCCTTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| 3UTR GCA 72 bp | CTCAAGAGATCCTCCCATTTCAGCCTCTGGAGTAGCTaGTACTATAGGTTCGCATTACTAAGTCAGGTCGTT | + |
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Preference number: 3 (lower is better) Translates to: LKRSSHFSLWSS*YYRFALLSQVV Trigger: AACGACCTGACTTAGTAATGCGAACCTATAGTAGCAGCTACTCCAGAGGCTGAAATGGGAGGATCTCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCAGCGGGGGCCCCTTCTaGGCAGCCTCGCTGCCGTCC | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPSGGPF*AASLPS Trigger: GGACGGCAGCGAGGCTGCGCAGAAGGGGCCCCCGCT...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGGGGGCTGGAGAGTCCTaGGCACAGGCAGGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLGAGES*AQAGRR Trigger: CCGGCGGCCTGCCTGTGCCCAGGACTCTCCAGCCCC...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCGCGGCTGGGCGGGGCTaGAGAGTCCTGGGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPAAGRG*RVLGTG Trigger: GCCTGTGCCCAGGACTCTCCAGCCCCGCCCAGCCGC...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCTGGGGCACGCGGCTTaGCCCGGCCTCGTTAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALLGHAA*PGLVSG Trigger: GCCGCTAACGAGGCCGGGGCAAGCCGCGTGCCCCAG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCCAGAGTGCGGGGGTTaGGCGGCACCGCAAGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALPECGG*AAPQGG Trigger: GCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTCTGCGCAGCCTCGCTaGCGTCCCAAAGCAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPSAQPR*RPKAAA Trigger: GGCTGCTGCTTTGGGACGGCAGCGAGGCTGCGCAGA...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTACTTTCAGAGCGCCCCTaGGGCTCGGGCGGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLLSERP*GSGGGS Trigger: CGAGCCGCCGCCCGAGCCGCAGGGGCGCTCTGAAAG...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGAAGGGGGCACACCAGTaGACCACTGCGCGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLKGAHQ*TTARPS Trigger: AGAGGGCCGCGCAGTGGTCCACTGGTGTGCCCCCTT...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTCCTTGCAGGGCACCTaGAGGTGTCGGCAGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPSLQGT*RCRQWS Trigger: CGACCACTGCCGACACCTGCAGGTGCCCTGCAAGGA...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTACCTGGAGCCTGGGGCTaGCTCCCAGCTCGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLPGAWG*LPARRP Trigger: TGGACGGCGAGCTGGGAGCCAGCCCCAGGCTCCAGG...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCACCATGACTCCGCCGTaGCCCTGGAGCCTGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALTMTPP*PWSLGL Trigger: CAGCCCCAGGCTCCAGGGCCACGGCGGAGTCATGGT...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCGACGTTGCAGTGAGCTaGGATGGCGCCATTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPDVAVS*DGAIAL Trigger: GAGGGCAATGGCGCCATCTCAGCTCACTGCAACGTC...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGTGCGCACTTCTCCCATaGGCGGCGGGTCGGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKCALLP*AAGRAA Trigger: AGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCA...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCGGCAGGAGAATCGCTTaGACCCAGGAGGTGGACGTT | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPGRRIA*TQEVDV Trigger: AACGTCCACCTCCTGGGTTCAAGCGATTCTCCTGCC...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGCCAGCATGGAGACAGTaGGTAGGCCTTGATGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLPAWRQ*VGLDAA Trigger: CGCTGCATCAAGGCCTACCCACTGTCTCCATGCTGG...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGAGGGAGAGCCCAGCATaGAGACAGTGGGTAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLRESPA*RQWVGL Trigger: AAGGCCTACCCACTGTCTCCATGCTGGGCTCTCCCT...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCCCAAGGGCTGAGCTCTaGGAACCAAGAAGGTCACGG | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPPRAEL*EPRRSR Trigger: CCGTGACCTTCTTGGTTCCCAGAGCTCAGCCCTTGG...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCCTGTGTTGCCCTGGCTaGACTGGACTCCAACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPLCCPG*TGLQLL Trigger: CAGGAGTTGGAGTCCAGTCCAGCCAGGGCAACACAG...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCCTGGCTGTGTTGCCCTaGCTGGACTGGACTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPLAVLP*LDWTPT Trigger: AGTTGGAGTCCAGTCCAGCCAGGGCAACACAGCCAG...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCCCTCTGTAGCTCCTTaGAGGGCACCTGCAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALPSVAP*RAPAGV Trigger: GACACCTGCAGGTGCCCTGCAAGGAGCTACAGAGGG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTACCTCTTCGGCCGCAATaGGCACTTCTCCCATGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLPLRPQ*ALLPCA Trigger: CGCGCATGGGAGAAGTGCGCATTGCGGCCGAAGAGG...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGCTGGACTCCAACTCCTaGGCTCAAGAGATCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLLDSNS*AQEILP Trigger: TGGGAGGATCTCTTGAGCCCAGGAGTTGGAGTCCAG...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCTGGAGCCTGAAAAACAAGGGCGTCTaGCTGTGTTGCCCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LNKRSVLRTMTPPWPWSLKNKGV*LCCPGW Trigger: CCAGCCAGGGCAACACAGCCAGACGCCCTTGTTTTT...CAGGCTCCAGGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCAGGTGGACGTTGCAGTaGGCTGAGATGGCGCCATTG | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALRWTLQ*AEMAPL Trigger: CAATGGCGCCATCTCAGCTCACTGCAACGTCCACCT...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTAGGCGGGTGGAGTACCTaGGGTCAGGAGTTTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLGGWST*GQEFET Trigger: GGTCTCAAACTCCTGACCTCAGGTACTCCACCCGCC...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAACTCCGCCGTGGCCCTaGAGCCTGGGGCTGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLTPPWP*SLGLAP Trigger: GGGAGCCAGCCCCAGGCTCCAGGGCCACGGCGGAGT...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCAGCCTCCGGAGTAGCTaGGACTACAGGTACCCACCA | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALSLRSS*DYRYPP Trigger: TGGTGGGTACCTGTAGTCCCAGCTACTCCGGAGGCT...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCGCAAACGACATAAATaGCCCCTGGCTTCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALRKRHK*PLASAP Trigger: AGGGGCTGAAGCCAGGGGGCATTTATGTCGTTTGCG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCTGAGATGGCGCCATTaGCCTCCAGCTTGTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALLRWRH*PPACVT Trigger: TGTCACACAAGCTGGAGGGCAATGGCGCCATCTCAG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAACCCCGACGGCCGCGTaGACCAGAGTGCGGGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLTPTAA*TRVRGL Trigger: CAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGT...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGACAGTGGGTAGGCCTTaGTGCAGCGGGAATCCACCA | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKTVGRP*CSGNPP Trigger: TGGTGGATTCCCGCTGCATCAAGGCCTACCCACTGT...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCTGAGGTCAGGAGTTTaGGACCAGCCTGACAACATG | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALLRSGV*DQPDNM Trigger: CATGTTGTCAGGCTGGTCTCAAACTCCTGACCTCAG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAACACCAGTGGACCACTaGGCGGCCCTCTTCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLTPVDH*AALFGR Trigger: GCGGCCGAAGAGGGCCGCGCAGTGGTCCACTGGTGT...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAGCACCGCAAGGCGGCTaGAAGGCCCGAAGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLAPQGG*KARRQG Trigger: TCCCTGCCTTCGGGCCTTGCAGCCGCCTTGCGGTGC...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAAGGTGGGGCTGTCTGTaGCCGAGATGCCCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLRWGCL*PRCPQA Trigger: GGCCTGGGGGCATCTCGGGCACAGACAGCCCCACCT...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCCTGACTTCGTGATCTaGCCGCCTCAGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKPDFVI*PPQPPK Trigger: TTTGGGAGGCTGAGGCGGGCAGATCACGAAGTCAGG...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGGCCCTCCAGCTTGTGTaGCAGAGGGAAACTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKALQLV*QRETPQ Trigger: TTGAGGAGTTTCCCTCTGTCACACAAGCTGGAGGGC...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTATCGCGCAGGCAGAAGTaGCACACCAGGGCGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLSRRQK*HTRAAQ Trigger: CTGTGCCGCCCTGGTGTGGCACTTCTGCCTGCGCGA...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | GTACCGGACCTAAACAAGCGCTCAGTCCTGAGAACCATGACTCCGCCGTGGCCCACTAACTACAAGCAATaGGCCAGTGGCCTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: VPDLNKRSVLRTMTPPWPTNYKQ*ASGLIC Trigger: ACAAATCAGGCCACTGGCCCATTGCTTGTAGTTAGT...GGGCCACGGCGGAGTCATGGTTCTCAGGACTGAGCGCTTGTTTAGGTCCGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCGTCTCAGTCTCATCTaGCTCCTCTTCTTCAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PRPQPGNKAPSTGPKQALRLSLI*LLFFKV Trigger: GACTTTGAAGAAGAGGAGGCAGATGAGACTGAGACG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTAGGCGTCTGGCTGTGTTaGCCTGGCTGGACTGGACTC | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLGVWLC*PGWTGL Trigger: GAGTCCAGTCCAGCCAGGGCAACACAGCCAGACGCC...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGGACATAAATGCCCCCTaGCTTCAGCCCCTTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKDINAP*LQPLQF Trigger: GAACTGAAGGGGCTGAAGCCAGGGGGCATTTATGTC...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTATGTCTGTGCCCGAGATaGCCCCAGGCCCCTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLCLCPR*PQAPFR Trigger: TCTGAAAGGGGCCTGGGGGCATCTCGGGCACAGACA...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR TCA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGAGCCTGACAACATGGTaGAACCCCGTCTCTACTAAA | + |
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Preference number: 4 (lower is better) Translates to: SFPDLSQETKRQVPDLNKSLTTW*NPVSTK Trigger: TTTAGTAGAGACGGGGTTTCACCATGTTGTCAGGCT...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | CCGGCCGGGTTTTACATCTTTAAAGAAGGGGGTCTGCCTGGGCACAGTGGCTTAAGGTACCCACCACCATaGCCGGCTAATTTTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: PAGFYIFKEGGLPGHSGLRYPPP*PANFCI Trigger: AATACAAAAATTAGCCGGGCATGGTGGTGGGTACCT...TAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAAAGATGTAAAACCCGGCCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTCACAGTGACAGAGCCATTTTTAGGGTGCATGACATGGATCAACTATTAAAGAAGGGGGTCTaGCTGGGCACAGTGGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: EATHSDRAIFRVHDMDQLLKKGV*LGTVAY Trigger: ATAAGCCACTGTGCCCAGGCAGACCCCCTTCTTTAA...TAGTTGATCCATGTCATGCACCCTAAAAATGGCTCTGTCACTGTGAGTGGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 90 bp | TCGGCCGCAATGCGCACTTCTCCCATGCGCGGCGGGTCGGGCGGCTaGGCGGGGCTGGAGAGTCCTGGGCACAGGCAGGCCGCCGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: SAAMRTSPMRGGSGG*AGLESPGHRQAAGP Trigger: CGGGCCGGCGGCCTGCCTGTGCCCAGGACTCTCCAGCCCCGCCCAGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCATTGCGGCCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | GGACCACTGCGCGGCCCTCTTCGGCCGCAATGCGCACTTCTCCCATaGGCGGCGGGTCGGGCGGCTGGGCGGGGCTGGAGAGTCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: GPLRGPLRPQCALLP*AAGRAAGRGWRVLG Trigger: GCCCAGGACTCTCCAGCCCCGCCCAGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCATTGCGGCCGAAGAGGGCCGCGCAGTGGTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | AGGGGGCACACCAGTGGACCACTGCGCGGCCCTCTTCGGCCGCAATaGGCACTTCTCCCATGCGCGGCGGGTCGGGCGGCTGGGCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RGHTSGPLRGPLRPQ*ALLPCAAGRAAGRG Trigger: GCCCCGCCCAGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCATTGCGGCCGAAGAGGGCCGCGCAGTGGTCCACTGGTGTGCCCCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 90 bp | GGGCCGTGCCCACCCCGACGGCCGCGTGGACCAGAGTGCGGGGGTTaGGCGGCACCGCAAGGCGGCTGCAAGGCCCGAAGGCAGGGATGT | + |
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Preference number: 5 (lower is better) Translates to: GPCPPRRPRGPECGG*AAPQGGCKARRQGC Trigger: ACATCCCTGCCTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGTGGGCACGGCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | CCGCGTGGACCAGAGTGCGGGGGTTGGGCGGCACCGCAAGGCGGCTaGAAGGCCCGAAGGCAGGGATGTCGGCCCCCTCGAGGCCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: PRGPECGGWAAPQGG*KARRQGCRPPRGPL Trigger: GAGAGGGCCTCGAGGGGGCCGACATCCCTGCCTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGTCCACGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | AGAAGTGCCACACCAGGGCGGCACAGCTTAGCAGGGCCAGGGCCGTaGCCACCCCGACGGCCGCGTGGACCAGAGTGCGGGGGTTGGGCG | + |
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Preference number: 5 (lower is better) Translates to: RSATPGRHSLAGPGP*PPRRPRGPECGGWA Trigger: CGCCCAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGTGGGCACGGCCCTGGCCCTGCTAAGCTGTGCCGCCCTGGTGTGGCACTTCT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | GTCCTGGGCACAGGCAGGCCGCCGGCCCGACCCTCTGTAGCTCCTTaGAGGGCACCTGCAGGTGTCGGCAGTGGTCGTAGTCGCAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLGTGRPPARPSVAP*RAPAGVGSGRSRRG Trigger: TCCCCTGCGACTACGACCACTGCCGACACCTGCAGGTGCCCTGCAAGGAGCTACAGAGGGTCGGGCCGGCGGCCTGCCTGTGCCCAGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | CCAGTAGTGGAGGACCGGGGAGAAGGGGGCACACCAGTGGACCACTaGGCGGCCCTCTTCGGCCGCAATGCGCACTTCTCCCATGCGCGG | + |
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Preference number: 5 (lower is better) Translates to: PVVEDRGEGGTPVDH*AALFGRNAHFSHAR Trigger: CCGCGCATGGGAGAAGTGCGCATTGCGGCCGAAGAGGGCCGCGCAGTGGTCCACTGGTGTGCCCCCTTCTCCCCGGTCCTCCACTACTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | GTCGGCCCCCTCGAGGCCCTCTCCTCCAGCCTGGGGCACGCGGCTTaGCCCGGCCTCGTTAGCGGCCACTACGCAAACGACATAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: VGPLEALSSSLGHAA*PGLVSGHYANDINA Trigger: GGCATTTATGTCGTTTGCGTAGTGGCCGCTAACGAGGCCGGGGCAAGCCGCGTGCCCCAGGCTGGAGGAGAGGGCCTCGAGGGGGCCGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 90 bp | GCAGGGGACAGCCGGCAAAGGCGGCCACGCCGTCTCAGTCTCATCTaGCTCCTCTTCTTCAAAGTCTTGAGGGGCCAAGGGCTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AGDSRQRRPRRLSLI*LLFFKVLRGQGLSS Trigger: AGAGCTCAGCCCTTGGCCCCTCAAGACTTTGAAGAAGAGGAGGCAGATGAGACTGAGACGGCGTGGCCGCCTTTGCCGGCTGTCCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 90 bp | CCCGGCCTCGTTAGCGGCCACTACGCAAACGACATAAATGCCCCCTaGCTTCAGCCCCTTCAGTTCGGCTCTGCGGACCGTAGCGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PGLVSGHYANDINAP*LQPLQFGSADRSVQ Trigger: CTGAACGCTACGGTCCGCAGAGCCGAACTGAAGGGGCTGAAGCCAGGGGGCATTTATGTCGTTTGCGTAGTGGCCGCTAACGAGGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGACCAGAGTGCGGGGGTaGGGCGGCACCGCAAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SFPDLSQETKRQVPDLNKTRVRG*GGTARR Trigger: CCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGT...CTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGGAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CAA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCGGGCGTCTGGCTGTGTaGCCCTGGCTGGACTGGACT | + |
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Preference number: 5 (lower is better) Translates to: PRPQPGNKAPSTGPKQALGRLAV*PWLDWT Trigger: AGTCCAGTCCAGCCAGGGCAACACAGCCAGACGCCC...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 90 bp | CTGCCTCCTCTTCTTCAAAGTCTTGAGGGGCCAAGGGCTGAGCTCTaGGAACCAAGAAGGTCACGGCCAGGAGCCACAGAAGGCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LPPLLQSLEGPRAEL*EPRRSRPGATEGRE Trigger: CTCCCTGCCTTCTGTGGCTCCTGGCCGTGACCTTCTTGGTTCCCAGAGCTCAGCCCTTGGCCCCTCAAGACTTTGAAGAAGAGGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CAA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCACCCTCTGTAGCTCCTaGCAGGGCACCTGCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PRPQPGNKAPSTGPKQALTLCSS*QGTCRC Trigger: ACACCTGCAGGTGCCCTGCAAGGAGCTACAGAGGGT...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS-3UTR CAA 90 bp | CCCAGACCTCAGCCAGGAAACAAAGCGCCAAGTACCGGACCTAAACAAGCGCTCCTCTTCTTCAAAGTCTaGAGGGGCCAAGGGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PRPQPGNKAPSTGPKQALLFFKV*RGQGLS Trigger: GCTCAGCCCTTGGCCCCTCAAGACTTTGAAGAAGAG...GAGCGCTTGTTTAGGTCCGGTACTTGGCGCTTTGTTTCCTGGCTGAGGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CAA 90 bp | AGGGCCGTGCCCACCCCGACGGCCGCGTGGACCAGAGTGCGGGGGTaGGGCGGCACCGCAAGGCGGCTGCAAGGCCCGAAGGCAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: RAVPTPTAAWTRVRG*GGTARRLQGPKAGM Trigger: CATCCCTGCCTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGTGGGCACGGCCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 72 bp | CCACCCCGACGGCCGCGTGGACCAGAGTGCGGGGGTTaGGCGGCACCGCAAGGCGGCTGCAAGGCCCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPRRPRGPECGG*AAPQGGCKARR Trigger: CCTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGTGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CAA 72 bp | CCCACCCCGACGGCCGCGTGGACCAGAGTGCGGGGGTaGGGCGGCACCGCAAGGCGGCTGCAAGGCCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: PTPTAAWTRVRG*GGTARRLQGPK Trigger: CTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGGTCCACGCGGCCGTCGGGGTGGG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | ACACCAGGGCGGCACAGCTTAGCAGGGCCAGGGCCGTaGCCACCCCGACGGCCGCGTGGACCAGAGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TPGRHSLAGPGP*PPRRPRGPECG Trigger: CCCGCACTCTGGTCCACGCGGCCGTCGGGGTGGGCACGGCCCTGGCCCTGCTAAGCTGTGCCGCCCTGGTGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 72 bp | ATGCGCACTTCTCCCATGCGCGGCGGGTCGGGCGGCTaGGCGGGGCTGGAGAGTCCTGGGCACAGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: MRTSPMRGGSGG*AGLESPGHRQA Trigger: GGCCTGCCTGTGCCCAGGACTCTCCAGCCCCGCCCAGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | CCAGAGTGCGGGGGTTGGGCGGCACCGCAAGGCGGCTaGAAGGCCCGAAGGCAGGGATGTCGGCCCCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: PECGGWAAPQGG*KARRQGCRPPR Trigger: TCGAGGGGGCCGACATCCCTGCCTTCGGGCCTTGCAGCCGCCTTGCGGTGCCGCCCAACCCCCGCACTCTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | ACCAGTGGACCACTGCGCGGCCCTCTTCGGCCGCAATaGGCACTTCTCCCATGCGCGGCGGGTCGGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: TSGPLRGPLRPQ*ALLPCAAGRAA Trigger: AGCCGCCCGACCCGCCGCGCATGGGAGAAGTGCGCATTGCGGCCGAAGAGGGCCGCGCAGTGGTCCACTGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | CTCGAGGCCCTCTCCTCCAGCCTGGGGCACGCGGCTTaGCCCGGCCTCGTTAGCGGCCACTACGCAAACGAC | + |
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Preference number: 6 (lower is better) Translates to: LEALSSSLGHAA*PGLVSGHYAND Trigger: GTCGTTTGCGTAGTGGCCGCTAACGAGGCCGGGGCAAGCCGCGTGCCCCAGGCTGGAGGAGAGGGCCTCGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | GAGGACCGGGGAGAAGGGGGCACACCAGTGGACCACTaGGCGGCCCTCTTCGGCCGCAATGCGCACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EDRGEGGTPVDH*AALFGRNAHFS Trigger: GGAGAAGTGCGCATTGCGGCCGAAGAGGGCCGCGCAGTGGTCCACTGGTGTGCCCCCTTCTCCCCGGTCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | ACAGGCAGGCCGCCGGCCCGACCCTCTGTAGCTCCTTaGAGGGCACCTGCAGGTGTCGGCAGTGGTCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: TGRPPARPSVAP*RAPAGVGSGRS Trigger: ACTACGACCACTGCCGACACCTGCAGGTGCCCTGCAAGGAGCTACAGAGGGTCGGGCCGGCGGCCTGCCTGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS TCA 72 bp | CAGGGAGAGCCCAGCATGGAGACAGTGGGTAGGCCTTaGTGCAGCGGGAATCCACCAGCTGACGTCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QGEPSMETVGRP*CSGNPPADVCG Trigger: CCCACAGACGTCAGCTGGTGGATTCCCGCTGCATCAAGGCCTACCCACTGTCTCCATGCTGGGCTCTCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS GCA 72 bp | AGCCGGCAAAGGCGGCCACGCCGTCTCAGTCTCATCTaGCTCCTCTTCTTCAAAGTCTTGAGGGGCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: SRQRRPRRLSLI*LLFFKVLRGQG Trigger: CCCTTGGCCCCTCAAGACTTTGAAGAAGAGGAGGCAGATGAGACTGAGACGGCGTGGCCGCCTTTGCCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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| CDS CCA 72 bp | GTTAGCGGCCACTACGCAAACGACATAAATGCCCCCTaGCTTCAGCCCCTTCAGTTCGGCTCTGCGGACCGT | + |
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Preference number: 6 (lower is better) Translates to: VSGHYANDINAP*LQPLQFGSADR Trigger: ACGGTCCGCAGAGCCGAACTGAAGGGGCTGAAGCCAGGGGGCATTTATGTCGTTTGCGTAGTGGCCGCTAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000317449.5 |
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