RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000188906

Ensembl transcript IDs: ENST00000298910.12, ENST00000343742.6, ENST00000416796.5, ENST00000430804.5, ENST00000474202.1, ENST00000481256.1, ENST00000636518.1, ENST00000644108.1, ENST00000679360.1, ENST00000679532.1, ENST00000679683.1, ENST00000680018.1, ENST00000680235.1, ENST00000680422.1, ENST00000680425.1, ENST00000680453.1, ENST00000680790.1, ENST00000681136.1, ENST00000681696.1

Found 1561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACC +
Preference number: 1 (lower is better)
Translates to: AILCCRVLVRLALSC*SRRSKEPLEANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CCA 90 bp CGGGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGT +
Preference number: 1 (lower is better)
Translates to: RGRIPAASKDIKLGW*RWQSTTSSCLNSLS
Trigger: ACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CCA 90 bp CCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACA +
Preference number: 1 (lower is better)
Translates to: PTSGDESQLPAKISN*GGGGGKAPQALVLT
Trigger: TGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 90 bp AAAATAGTCTCAGTGAGGAGGGCCAAACAGCTGAGCGCTGAGATCTaGAATGCTGCATTCTCTGGGTACTGCTGCACAGCTTTCACCACA +
Preference number: 1 (lower is better)
Translates to: KIVSVRRAKQLSAEI*NAAFSGYCCTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCACTGAGACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR CCA 90 bp TTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAGCTGATGATCTaGCTGTCACCTTTCCCAATGCTTATCGTCAACGCTTTTCGTACA +
Preference number: 1 (lower is better)
Translates to: LATSRASLLKSKLMI*LSPFPMLIVNAFRT
Trigger: TGTACGAAAAGCGTTGACGATAAGCATTGGGAAAGGTGACAGCCAGATCATCAGCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 90 bp CAGCTGAGCGCTGAGATCTGCAATGCTGCATTCTCTGGGTACTGCTaGACAGCTTTCACCACAAACTCATGGACTTCGTTTAATACCAGG +
Preference number: 1 (lower is better)
Translates to: QLSAEICNAAFSGYC*TAFTTNSWTSFNTR
Trigger: CCTGGTATTAAACGAAGTCCATGAGTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR GCA 90 bp AAACAGCTGAGCGCTGAGATCTGCAATGCTGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACAAACTCATGGACTTCGTTTAATACC +
Preference number: 1 (lower is better)
Translates to: KQLSAEICNAAFSGY*CTAFTTNSWTSFNT
Trigger: GGTATTAAACGAAGTCCATGAGTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR GCA 90 bp GCCAAGAAGGTTCAACTTTTCCTATACAAAATCCTCCAAGGCAAATaGTATTGTTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAGC +
Preference number: 1 (lower is better)
Translates to: AKKVQLFLYKILQGK*YCWPHPGPASLRAS
Trigger: GCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGGATTTTGTATAGGAAAAGTTGAACCTTCTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 90 bp AACTTCAGCCTGTCCCTTGCTGAGGTCATAGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATGGGGATGAGTACTATAGAATTCCTC +
Preference number: 1 (lower is better)
Translates to: NFSLSLAEVIDSKVQ*SLRHKMGMSTIEFL
Trigger: GAGGAATTCTATAGTACTCATCCCCATTTTATGACGCAGCGAGCATTGTACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR GCA 90 bp TCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTaGCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATAT +
Preference number: 1 (lower is better)
Translates to: SCRLCVASHQKHPNV*QRESQGKKKREPLY
Trigger: ATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 90 bp GGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGATTTACTAAGAGATCTCCTTCCTCTG +
Preference number: 1 (lower is better)
Translates to: GQPKSSQGQSEILEW*ALVDLDLLRDLLPL
Trigger: CAGAGGAAGGAGATCTCTTAGTAAATCCAGATCAACCAAGGCTCACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 90 bp TCGGTGTGCCCACAGCCCAGCCAAATGCTTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAAT +
Preference number: 1 (lower is better)
Translates to: SVCPQPSQMLAFLLL*CVATMHSTITFLGN
Trigger: ATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTACACATCACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTGGGCACACCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 90 bp TCCCTTAAGTTCAAAGATTTCCAGTGTGCGGGACCTGGTAGGTACTaGATATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: SLKFKDFQCAGPGRY*ISLLLISKDRKCGR
Trigger: TCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACTGGAAATCTTTGAACTTAAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 90 bp AAAACTATGCAAGAAAGCTGTTATGGGAACCCAAAGCGGGAACTTTaGCCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCT +
Preference number: 1 (lower is better)
Translates to: KTMQESCYGNPKREL*PNQCWLLRGFDTGA
Trigger: AGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCCGCTTTGGGTTCCCATAACAGCTTTCTTGCATAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR TCA 90 bp GTGTCAAACTCTTCAGAGTTTCACATAGCTGTTGTGGAAAGCTCGTaGGTGCATTCTGGTGAAGCTCCAGCTTTTCAAGATGCTCCAAAT +
Preference number: 1 (lower is better)
Translates to: VSNSSEFHIAVVESS*VHSGEAPAFQDAPN
Trigger: ATTTGGAGCATCTTGAAAAGCTGGAGCTTCACCAGAATGCACTCACGAGCTTTCCACAACAGCTATGTGAAACTCTGAAGAGTTTGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 90 bp CAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATaGCTTGTCGCCAATACATTCTGTTTGGGCGAAGTGCTCGTTCTC +
Preference number: 1 (lower is better)
Translates to: QILPDNKLQETNLSK*LVANTFCLGEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGCGACAAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 90 bp TCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTaGATCCAAGTTTCTGGACTTCATCATTGGCTGGAAATGAGTGCA +
Preference number: 1 (lower is better)
Translates to: SVAPLRLSQTAHVKL*IQVSGLHHWLEMSA
Trigger: TGCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR TCA 90 bp ATACCTGTCCTAGGTATGACCATTAGGATCATTGTGAGATTCAGCTaGGATGACACACTGACCATACACAAGCTTCAAGGTCCTTTTGGA +
Preference number: 1 (lower is better)
Translates to: IPVLGMTIRIIVRFS*DDTLTIHKLQGPFG
Trigger: TCCAAAAGGACCTTGAAGCTTGTGTATGGTCAGTGTGTCATCTCAGCTGAATCTCACAATGATCCTAATGGTCATACCTAGGACAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR TCA 90 bp CCATCGCTGCCTGAGGCTGTTCCTTCTTCCACAGCACTTTTCATCTaGTATCTGATCACCATTCTTGCTAGTGTAGATGCTATATTTGTT +
Preference number: 1 (lower is better)
Translates to: PSLPEAVPSSTALFI*YLITILASVDAIFV
Trigger: AACAAATATAGCATCTACACTAGCAAGAATGGTGATCAGATATCAGATGAAAAGTGCTGTGGAAGAAGGAACAGCCTCAGGCAGCGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CCA 90 bp ATCTCCAGCAACCCAGGAAACCATTCTTCCATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAAAGAATACAGCCTTTTCTACAAGAA +
Preference number: 1 (lower is better)
Translates to: ISSNPGNHSSMRESM*STTWPKRIQPFLQE
Trigger: TTCTTGTAGAAAAGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATTGATTCTCTCATGGAAGAATGGTTTCCTGGGTTGCTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CCA 90 bp CATGGGAGAAAGAATACCACCTTCAATAAATTGTGCTGGAAAAGCTaGATATCAGTATGCAGAAGGATGAAAGTAGGCCCCACTCTCTCA +
Preference number: 1 (lower is better)
Translates to: HGRKNTTFNKLCWKS*ISVCRRMKVGPTLS
Trigger: TGAGAGAGTGGGGCCTACTTTCATCCTTCTGCATACTGATATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGTATTCTTTCTCCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR GCA 90 bp TTATTCAGGAGTTCCTTGGTGATTTTACTCATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACA +
Preference number: 1 (lower is better)
Translates to: LFRSSLVILLMQALR*FSSETSKCVPTRIT
Trigger: TGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 90 bp ATTTCCCCATTTCATTGGGAAAGGATCTTAGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGATTTTCAAGACAGCCAATCTCAGGAG +
Preference number: 1 (lower is better)
Translates to: ISPFHWERILVPSCN*HPEMSDFQDSQSQE
Trigger: CTCCTGAGATTGGCTGTCTTGAAAATCTGACATCTCTGGATGTCAGTTACAACTTGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 90 bp TACCACATCAGTGAGGTTCTCAGGTACAAAAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAGAGTTGGACATTTCACTGTAGGATC +
Preference number: 1 (lower is better)
Translates to: YHISEVLRYKRQLVI*QVKLFQSWTFHCRI
Trigger: GATCCTACAGTGAAATGTCCAACTCTGAAACAGTTTAACCTGTCATATAACCAGCTGTCTTTTGTACCTGAGAACCTCACTGATGTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 90 bp AAGATTTCCAGTGTGCGGGACCTGGTAGGTACTGAATATCATTGCTaGTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTT +
Preference number: 1 (lower is better)
Translates to: KISSVRDLVGTEYHC*SYLKTASVEDLKLL
Trigger: AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACTGGAAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR GCA 90 bp TCAAAGATTTCCAGTGTGCGGGACCTGGTAGGTACTGAATATCATTaGTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTG +
Preference number: 1 (lower is better)
Translates to: SKISSVRDLVGTEYH*CSYLKTASVEDLKL
Trigger: CAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACTGGAAATCTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR GCA 90 bp GATCTTGAAATTAAGGCTCTCGTTTATGATGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTCGGTGGCATTCACAAAGTGGTAATC +
Preference number: 1 (lower is better)
Translates to: DLEIKALVYDGFPKF*QSIRFLGGIHKVVI
Trigger: GATTACCACTTTGTGAATGCCACCGAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACCATCATAAACGAGAGCCTTAATTTCAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CCA 90 bp AAAAGCATACATGGGAGAAAGAATACCACCTTCAATAAATTGTGCTaGAAAAGCTGGATATCAGTATGCAGAAGGATGAAAGTAGGCCCC +
Preference number: 1 (lower is better)
Translates to: KSIHGRKNTTFNKLC*KSWISVCRRMKVGP
Trigger: GGGGCCTACTTTCATCCTTCTGCATACTGATATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGTATTCTTTCTCCCATGTATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR GCA 90 bp GTGGCACTTTGCATTCCAAGATCTGATTTCTTGGTTTTCATTAATTaGTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATC +
Preference number: 1 (lower is better)
Translates to: VALCIPRSDFLVFIN*CNKVVLPLPVFPTI
Trigger: GATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAATGAAAACCAAGAAATCAGATCTTGGAATGCAAAGTGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CCA 90 bp TTAACATTTTGTTCTAAGAGAGTTGACAATGCATTCGCAGATGCCTaGAAAACTTCCTTTGATGAAGAATGCATCAGCATGGAGAGCATC +
Preference number: 1 (lower is better)
Translates to: LTFCSKRVDNAFADA*KTSFDEECISMESI
Trigger: GATGCTCTCCATGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGGCATCTGCGAATGCATTGTCAACTCTCTTAGAACAAAATGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CCA 90 bp AGTTTCTCTACCACATCAGTGAGGTTCTCAGGTACAAAAGACAGCTaGTTATATGACAGGTTAAACTGTTTCAGAGTTGGACATTTCACT +
Preference number: 1 (lower is better)
Translates to: SFSTTSVRFSGTKDS*LYDRLNCFRVGHFT
Trigger: AGTGAAATGTCCAACTCTGAAACAGTTTAACCTGTCATATAACCAGCTGTCTTTTGTACCTGAGAACCTCACTGATGTGGTAGAGAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 90 bp GAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTaGATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATT +
Preference number: 1 (lower is better)
Translates to: ENLCATSSPHYISFR*ICGFTQTHQWSTDI
Trigger: AATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 90 bp AGCAAGCTATTTGGGTCCCAAAGTACATACAATTCAACTAGAGAATaGAACAACTTTGGTAGAATAAGACTACTGAGACAACCTATTGAG +
Preference number: 1 (lower is better)
Translates to: SKLFGSQSTYNSTRE*NNFGRIRLLRQPIE
Trigger: CTCAATAGGTTGTCTCAGTAGTCTTATTCTACCAAAGTTGTTGCATTCTCTAGTTGAATTGTATGTACTTTGGGACCCAAATAGCTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR CCA 90 bp ACTTTAGGACAAGCCTCAAGAAAGTTCTCTGATAGGGATGAAATGTaGTTCTTACTAAGGTTTAAAATCTTCAGTTCCTTCAGTCTCAAG +
Preference number: 1 (lower is better)
Translates to: TLGQASRKFSDRDEM*FLLRFKIFSSFSLK
Trigger: CTTGAGACTGAAGGAACTGAAGATTTTAAACCTTAGTAAGAACCACATTTCATCCCTATCAGAGAACTTTCTTGAGGCTTGTCCTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 90 bp ATATTTTTATCCATCATAACTAAAGCTCCTTTCTCCTTCAGCAACTaGAAAGTGTTAGATATTTATCCTCATGGTCTTGGTAGGAGCTGT +
Preference number: 1 (lower is better)
Translates to: IFLSIITKAPFSFSN*KVLDIYPHGLGRSC
Trigger: ACAGCTCCTACCAAGACCATGAGGATAAATATCTAACACTTTTCAGTTGCTGAAGGAGAAAGGAGCTTTAGTTATGATGGATAAAAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR TCA 90 bp CTAGACCATAAATATGCTTTTTCACTCAAGTCCAAGATGCTGATCTaGTTATGGCTAAATAAGAGTTCCCTTAAGTTCAAAGATTTCCAG +
Preference number: 1 (lower is better)
Translates to: LDHKYAFSLKSKMLI*LWLNKSSLKFKDFQ
Trigger: CTGGAAATCTTTGAACTTAAGGGAACTCTTATTTAGCCATAATCAGATCAGCATCTTGGACTTGAGTGAAAAAGCATATTTATGGTCTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 90 bp GTTCTCTCCCTGAAAGCATGTAAGGTGAAATCTCAAGTAATCGATTaGTTAATCTTGACCAAAATCCCATTGGAAAATAAGGCATTTCAT +
Preference number: 1 (lower is better)
Translates to: VLSLKACKVKSQVID*LILTKIPLENKAFH
Trigger: ATGAAATGCCTTATTTTCCAATGGGATTTTGGTCAAGATTAATCAATCGATTACTTGAGATTTCACCTTACATGCTTTCAGGGAGAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 90 bp ACATTATTGCAAGGAATCGCTAGGGAATGTAAACAATGCAGCACATaGAGCACAATTTCCTCTTCATCTTTAAAATTTGTTAACGCACTT +
Preference number: 1 (lower is better)
Translates to: TLLQGIARECKQCST*STISSSSLKFVNAL
Trigger: AAGTGCGTTAACAAATTTTAAAGATGAAGAGGAAATTGTGCTTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTTGCAATAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: SRRSKEPLEANSITNIRGQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 2 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTTCAAGGTCCTTTTaGATGCTCCTCTTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQASRSF*MLLFPD
Trigger: GTCTGGAAAGAGGAGCATCCAAAAGGACCTTGAAGC...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR TCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATGGAAACCAGAATTTTTaGCAGCAGATGTCCAGTTCC +
Preference number: 2 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDGNQNF*QQMSSS
Trigger: GGAACTGGACATCTGCTGGCAAAAATTCTGGTTTCC...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 2 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: SATWSAILCCRVLVRLALGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTTCAATTTCCTCAATTaGGCAGAGGTCATACCTGTC +
Preference number: 2 (lower is better)
Translates to: SATWSAILCCRVLVRLALFNFLN*AEVIPV
Trigger: GACAGGTATGACCTCTGCCCAATTGAGGAAATTGAA...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR CCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGCAGTGTGTGAAGCACTaGATCCATAGCACCTTCCAG +
Preference number: 2 (lower is better)
Translates to: FILKSQGFMASTSACPLLQCVKH*IHSTFQ
Trigger: CTGGAAGGTGCTATGGATTCAGTGCTTCACACACTG...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCAAGATGCTGACAATTTaGGGATTGCTAAGATTGTCT +
Preference number: 2 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSKMLTI*GLLRLS
Trigger: AGACAATCTTAGCAATCCTCAAATTGTCAGCATCTT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCGATCCCTCCTTTGCTTaGTTGGCATCTGCTCCCAAT +
Preference number: 2 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIDPSFA*LASAPN
Trigger: ATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATC...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 2 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTAGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 2 (lower is better)
Translates to: TSGARNPGVPSDVFIPILGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGTTTGGGGACCACTGCTaGCATTATATCCAGGGAAGT +
Preference number: 2 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEFGDHC*HYIQGS
Trigger: ACTTCCCTGGATATAATGGCAGCAGTGGTCCCCAAA...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTCGAAGCGCCTCCAGCTaGACTGGTAATGATGTCTCA +
Preference number: 2 (lower is better)
Translates to: HNRAILLSNIESSVYHHCRSASS*TGNDVS
Trigger: TGAGACATCATTACCAGTGCAGCTGGAGGCGCTTCG...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCATCCTCCAAGGCAAATaGTATTGTTGGCCACATCCA +
Preference number: 2 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPILQGK*YCWPHP
Trigger: TGGATGTGGCCAACAATAGCATTTGCCTTGGAGGAT...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: SSETSKCVPTRITGEEEARAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAATCTATCACAGGCCTGTaGTCAGACAAACTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGESITGL*SDKLCH
Trigger: ATGGCACAGTTTGTCTGACCACAGGCCTGTGATAGA...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680425.1
3UTR CAA 90 bp GGTTCAACTTTTCCTATACAAAATCCTCCAAGGCAAATGCTATTGTaGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAGCTGATGATC +
Preference number: 2 (lower is better)
Translates to: GSTFPIQNPPRQMLL*ATSRASLLKSKLMI
Trigger: GATCATCAGCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGGATTTTGTATAGGAAAAGTTGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 90 bp GAAGGTTCAACTTTTCCTATACAAAATCCTCCAAGGCAAATGCTATaGTTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAGCTGATG +
Preference number: 2 (lower is better)
Translates to: EGSTFPIQNPPRQML*LATSRASLLKSKLM
Trigger: CATCAGCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGGATTTTGTATAGGAAAAGTTGAACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp ATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGAGCTGAGATGACACACTaGCCATACACAAGCTTCAAG +
Preference number: 2 (lower is better)
Translates to: MQALRCFSSETSKCVPTRAEMTH*PYTSFK
Trigger: CTTGAAGCTTGTGTATGGTCAGTGTGTCATCTCAGC...TCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR TCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCGCGAGCCTTTATATTaGAGAGCCAAGGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: HFHNRAILLSNIESSVYHREPLY*RAKASW
Trigger: CCATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCG...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAAGCATCACTTCCCTATaGGCTGGGAAACTGATATGC +
Preference number: 2 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGISITSL*AGKLIC
Trigger: GCATATCAGTTTCCCAGCTCATAGGGAAGTGATGCT...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTCTTTCTCACATACCTaGCAAATTAAAGAAGATCCC +
Preference number: 2 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKSFSHT*QIKEDP
Trigger: GGGATCTTCTTTAATTTGTCAGGTATGTGAGAAAGA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 2 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 2 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 2 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTAGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: TSGARNPGVPSDVFIPILGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 2 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCAATTCTGTATCCTCCCTaGATTCTTCTGGCATGCCAG +
Preference number: 2 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPILYPP*ILLACQ
Trigger: CTGGCATGCCAGAAGAATCCAGGGAGGATACAGAAT...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 90 bp CCTCGCTTATTCAGGAGTTCCTTGGTGATTTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGA +
Preference number: 2 (lower is better)
Translates to: PRLFRSSLVILLMQA*RCFSSETSKCVPTR
Trigger: TCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGAATAAGCGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 90 bp TCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCAGACTGTGTCCCAGACACAATCCAG +
Preference number: 2 (lower is better)
Translates to: SVIFSRVCLFFPSSV*MTRRVPDCVPDTIQ
Trigger: CTGGATTGTGTCTGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAGACATACCCTAGAAAAGATGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CAA 90 bp GTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTaGCATCCAAGTTTCTGGACTTCATCATTGGCTGGAAATGAGTGC +
Preference number: 2 (lower is better)
Translates to: VSCSSETLSNSTCKA*HPSFWTSSLAGNEC
Trigger: GCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTACAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 2 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCATGATGCTGTTATTCTaGTCACACGCTCTCTCTAGC +
Preference number: 2 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIMMLLF*SHALSS
Trigger: GCTAGAGAGAGCGTGTGATCAGAATAACAGCATCAT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTTTTCATCTGATATCTaGTCACCATTCTTGCTAGTG +
Preference number: 2 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAFSSDI*SPFLLV
Trigger: CACTAGCAAGAATGGTGATCAGATATCAGATGAAAA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 2 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 2 (lower is better)
Translates to: FILKSQGFMASTSACPLLKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 2 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: SATWSAILCCRVLVRLALTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGTATTTTGGGGACCACTaGTGCCATTATATCCAGGGA +
Preference number: 2 (lower is better)
Translates to: SSETSKCVPTRITGEEEAYFGDH*CHYIQG
Trigger: TCCCTGGATATAATGGCAGCAGTGGTCCCCAAAATA...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 2 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 2 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 2 (lower is better)
Translates to: HFHNRAILLSNIESSVYHALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR CCA 90 bp ATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGATACAGCTTGTATCTTTaGGAGAGAGTGCCGGTCTTA +
Preference number: 2 (lower is better)
Translates to: MQALRCFSSETSKCVPTRYSLYL*ERVPVL
Trigger: TAAGACCGGCACTCTCTCCCAAAGATACAAGCTGTA...TCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp TACTCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACTCCCTGGATTCTTCTaGCATGCCAGGCACTATAAA +
Preference number: 2 (lower is better)
Translates to: YSCRLCVASHQKHPNVCQLPGFF*HARHYK
Trigger: TTTATAGTGCCTGGCATGCCAGAAGAATCCAGGGAG...TTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAGGCAAATGCTATTGTTaGCCACATCCAGGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLGKCYC*PHPGPA
Trigger: GGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCC...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTATGGGCCCCAAGGAATTaGAATGTCTTTGCAAATTTG +
Preference number: 2 (lower is better)
Translates to: TSGARNPGVPSDVFIPILWAPRN*NVFANL
Trigger: CAAATTTGCAAAGACATTCCAATTCCTTGGGGCCCA...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 90 bp CTAAGAGAGTTGACAATGCATTCGCAGATGCCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCATGGAGAGCATCACTTCCCTATGAG +
Preference number: 2 (lower is better)
Translates to: LRELTMHSQMPGKLP*MKNASAWRASLPYE
Trigger: CTCATAGGGAAGTGATGCTCTCCATGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGGCATCTGCGAATGCATTGTCAACTCTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGAT +
Preference number: 2 (lower is better)
Translates to: SSETSKCVPTRITGEEEAVPSCN*HPEMSD
Trigger: ATCTGACATCTCTGGATGTCAGTTACAACTTGGAAC...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCGCGAGCCTTTATATTaGAGAGCCAAGGCTTCATGG +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIREPLY*RAKASW
Trigger: CCATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCATGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 2 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 2 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: VATMHSTITFLGNKMRLVLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATAGAGTGCCGGTCTTATaGTGTTTGAATGGCACTCCT +
Preference number: 2 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNRVPVL*CLNGTP
Trigger: AGGAGTGCCATTCAAACATCATAAGACCGGCACTCT...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCAGAAGAAATGCTGTCTaGATGCCTCATATGGGATTG +
Preference number: 2 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIRRNAV*MPHMGL
Trigger: CAATCCCATATGAGGCATTCAGACAGCATTTCTTCT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAATGGTCAGACAAACTGTaGCATGATTTTACAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEWSDKL*HDFTKP
Trigger: TGGCTTTGTAAAATCATGGCACAGTTTGTCTGACCA...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680425.1
3UTR-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 2 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFRAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 2 (lower is better)
Translates to: HFHNRAILLSNIESSVYHPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 2 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: FILKSQGFMASTSACPLLMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTAAGAATGCATCAGCATaGAGAGCATCACTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGKNASA*RASLPY
Trigger: ATAGGGAAGTGATGCTCTCCATGCTGATGCATTCTT...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 90 bp CTTATTCAGGAGTTCCTTGGTGATTTTACTCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGAATCAC +
Preference number: 2 (lower is better)
Translates to: LIQEFLGDFTHAGFA*LLIRNIQMCANENH
Trigger: GTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 90 bp TCCACTTTCACTGTCAAAATCTGTGCCATGATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAGTCACTTAACTGCAGTGCTGGGTCT +
Preference number: 2 (lower is better)
Translates to: STFTVKICAMILQSH*GSTKYKSLNCSAGS
Trigger: AGACCCAGCACTGCAGTTAAGTGACTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGACAGTGAAAGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 2 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 2 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
3UTR-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCGTTTCAATATGCTCTTaGGTTCCATGGTACAGGATT +
Preference number: 2 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIVSICS*VPWYRI
Trigger: AATCCTGTACCATGGAACTCAAGAGCATATTGAAAC...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679532.1
3UTR-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAACAAGGTCCTTTTGGATaGTCCTCTTTCCAGACCCAA +
Preference number: 2 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQQGPFG*SSFQTQ
Trigger: TTGGGTCTGGAAAGAGGAGCATCCAAAAGGACCTTG...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR GCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 2 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp AAGATCCCTCCTTTGCTTGATTGGCATCTGCTCCCAATAGAAGCAAGCATTCAATCCTTTGATGAAGAATaGATCAGCATGGAGAGCATC +
Preference number: 2 (lower is better)
Translates to: KIPPLLDWHLLPIEASIQSFDEE*ISMESI
Trigger: GATGCTCTCCATGCTGATGCATTCTTCATCAAAGGA...TTGAATGCTTGCTTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTAAAAATTTCCATCGCTaGCTGAGGCTGTTCCTTCTT +
Preference number: 2 (lower is better)
Translates to: HNRAILLSNIESSVYHHCKNFHR*LRLFLL
Trigger: AAGAAGGAACAGCCTCAGGCAGCGATGGAAATTTTT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 2 (lower is better)
Translates to: SSETSKCVPTRITGEEEAIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 2 (lower is better)
Translates to: HNRAILLSNIESSVYHHCFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 2 (lower is better)
Translates to: VATMHSTITFLGNKMRLVIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACTTGTGCTGGAAAAGCTaGATATCAGTATGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: HFHNRAILLSNIESSVYHLCWKS*ISVCRR
Trigger: CCTTCTGCATACTGATATCCAGCTTTTCCAGCACAA...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR CAA 90 bp CGACCTGCAAAATCCCACACATTTAGGACGAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGCCAGTCTTTCACATCTATGCCAACT +
Preference number: 2 (lower is better)
Translates to: RPAKSHTFRTRSLFL*SLIWIGQSFTSMPT
Trigger: AGTTGGCATAGATGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCTCGTCCTAAATGTGTGGGATTTTGCAGGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGATTGTGAGATTCAGCTaGGATGACACACTGACCATA +
Preference number: 2 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQIVRFS*DDTLTI
Trigger: TATGGTCAGTGTGTCATCTCAGCTGAATCTCACAAT...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 2 (lower is better)
Translates to: VYHHCYDVGITESCIRKQGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 2 (lower is better)
Translates to: HNRAILLSNIESSVYHHCSKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
3UTR-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTCTTCTCTTGTGGGACTaGGAGCATTTACTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSLLLWD*EHLLPP
Trigger: TGGAGGGAGTAAATGCTCTCAGTCCCACAAGAGAAG...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR TCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGGTAATGATGTCTCATaGCGTTTCATAACTGTTAGT +
Preference number: 2 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIGNDVS*RFITVS
Trigger: ACTAACAGTTATGAAACGTCATGAGACATCATTACC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTAACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: TSGARNPGVPSDVFIPILTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 2 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTATTTCCCCATTTCATTaGGAAAGGATCTTAGTTCCA +
Preference number: 2 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGISPFH*ERILVP
Trigger: TGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp ACTCACTTCTTGAATTCTTTCACTCATAGGGAATGCTTTCATAGCTTCCACCACTCATTTCCAACATCCTaGGGTCCCATTAAGCTTTGC +
Preference number: 2 (lower is better)
Translates to: THFLNSFTHRECFHSFHHSFPTS*GPIKLC
Trigger: GCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGA...GTGGTGGAAGCTATGAAAGCATTCCCTATGAGTGAAAGAATTCAAGAAGTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGAATTTCTTGGTCATCTaGATACATCTGCAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKENFLVI*IHLQCV
Trigger: CACACACTGCAGATGTATCCAGATGACCAAGAAATT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAACACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGAT +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFVPSCN*HPEMSD
Trigger: ATCTGACATCTCTGGATGTCAGTTACAACTTGGAAC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 2 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 2 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTATGAGCTGGGAAACTaGTATGCACAAAACTCCTTG +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFYELGN*YAQNSL
Trigger: CAAGGAGTTTTGTGCATATCAGTTTCCCAGCTCATA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 2 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 2 (lower is better)
Translates to: VATMHSTITFLGNKMRLVGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDITSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
3UTR-3UTR GCA 90 bp TTCTGGACTTCATCATTGGCTGGAAATGAGTGCATGGCATCAAAAATTAACATGGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACT +
Preference number: 2 (lower is better)
Translates to: FWTSSLAGNECMASKINMGPIKL*IVPGQT
Trigger: AGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC...CATGTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR GCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCTCAGCTGCAGTAATCTaGTTCTCTTGTGGGACTGAG +
Preference number: 2 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFISAAVI*FSCGTE
Trigger: CTCAGTCCCACAAGAGAAGCAGATTACTGCAGCTGA...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTAGAAGATCCCTCCTTTaGTTGATTGGCATCTGCTCC +
Preference number: 2 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSRRSLL*LIGICS
Trigger: GGAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 2 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCATCTATGCCAACTGTaGCACTTTGCATTCCAAGAT +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIHLCQL*HFAFQD
Trigger: ATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 2 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATCACTTCCCTATGAGCTaGGAAACTGATATGCACAAA +
Preference number: 2 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNHFPMS*ETDMHK
Trigger: TTTGTGCATATCAGTTTCCCAGCTCATAGGGAAGTG...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 90 bp ACATCTATGCCAACTGTGGCACTTTGCATTCCAAGATCTGATTTCTaGGTTTTCATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCA +
Preference number: 2 (lower is better)
Translates to: TSMPTVALCIPRSDF*VFINCCNKVVLPLP
Trigger: TGGGAGTGGTAAAACCACCTTATTGCAGCAATTAATGAAAACCAAGAAATCAGATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 90 bp GGCACCAAAAGCATACATGGGAGAAAGAATACCACCTTCAATAAATaGTGCTGGAAAAGCTGGATATCAGTATGCAGAAGGATGAAAGTA +
Preference number: 2 (lower is better)
Translates to: GTKSIHGRKNTTFNK*CWKSWISVCRRMKV
Trigger: TACTTTCATCCTTCTGCATACTGATATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGTATTCTTTCTCCCATGTATGCTTTTGGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR CAA 90 bp CCCTGTTTGGAAAACAGTATCCTTCTAAATGTTACCTTTCTGCTTTaGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCAT +
Preference number: 2 (lower is better)
Translates to: PCLENSILLNVTFLL*CTFSIFPVVAQYQH
Trigger: ATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGGTAACATTTAGAAGGATACTGTTTTCCAAACAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR TCA 90 bp TTCTGGACTTCATCATTGGCTGGAAATGAGTGCATGGCATCAAAAATTAACATGCTTCAGTCCAATCACTaGCAAGTTTACACTGGCATT +
Preference number: 2 (lower is better)
Translates to: FWTSSLAGNECMASKINMLQSNH*QVYTGI
Trigger: AATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAG...CATGTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp AAGGAATCGCTAGGGAATGTAAACAATGCAGCACATGAAGCACAATTTCCTCTTCCAATATCAGCAAGGTaGTTTTACCTGAAGTTAGGA +
Preference number: 2 (lower is better)
Translates to: KESLGNVNNAAHEAQFPLPISAR*FYLKLG
Trigger: TCCTAACTTCAGGTAAAATCACCTTGCTGATATTGG...AAGAGGAAATTGTGCTTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAATCTACAGATTCAATaGAATTCCCATGAAAGCTCC +
Preference number: 2 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFNLQIQ*NSHESS
Trigger: GGAGCTTTCATGGGAATTTCATTGAATCTGTAGATT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR TCA 90 bp ATATATTCTCTCTCAGAAGCCAGAGAAGAAATGCTGTCTGAATGCCTCATATGGACTAAGTCAAATGAATaGTGCACCAGCAGCTTAGAA +
Preference number: 2 (lower is better)
Translates to: IYSLSEAREEMLSECLIWTKSNE*CTSSLE
Trigger: TTCTAAGCTGCTGGTGCATCATTCATTTGACTTAGT...CCATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTTCTGAGAGAGAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 2 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR GCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 2 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 2 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: HNRAILLSNIESSVYHHCNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 2 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCACCAAAAGCATACATaGGAGAAAGAATACCACCTT +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIHQKHT*EKEYHL
Trigger: AAGGTGGTATTCTTTCTCCCATGTATGCTTTTGGTG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR CCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAACTTCATGATCAAAAATaGGCCCCAAGGAATTGGAAT +
Preference number: 2 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQLHDQK*APRNWN
Trigger: ATTCCAATTCCTTGGGGCCCATTTTTGATCATGAAG...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
3UTR-3UTR TCA 90 bp GAAGAGGACACAAACAAATGGAAAGATATTCATGCTCACAGACTGGAAGAATTAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: EEDTNKWKDIHAHRLEELRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TAATTCTTCCAGTCTGTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR TCA 90 bp ATCACTTTGAGCAAACACACTGTCCATAGAAGAGTCAGGAATAAAGGTCCATTCGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 2 (lower is better)
Translates to: ITLSKHTVHRRVRNKGPFVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...GAATGGACCTTTATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp CTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAACTGTTATTAAGAATCAATTGGTaGACACCAAGGACTTCCCAA +
Preference number: 2 (lower is better)
Translates to: LRSSVQSLTSLHWHYELLLRINW*TPRTSQ
Trigger: TTGGGAAGTCCTTGGTGTTCACCAATTGATTCTTAA...TAACAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp TGTTCTTTCTATGCCACGTTAATGCTTTGTAACAGGCTTCCAGCCAAAACAATTATCATTGGCTGGAAATaGGTGCATGGCATCAAAAAT +
Preference number: 2 (lower is better)
Translates to: CSFYATLMLCNRLPAKTIIIGWK*VHGIKN
Trigger: ATTTTTGATGCCATGCACTCATTTCCAGCCAATGAT...AATTGTTTTGGCTGGAAGCCTGTTACAAAGCATTAACGTGGCATAGAAAGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTACATCTGCAGTGTGTaGAGCACTGAATCCATAGCA +
Preference number: 2 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVYICSV*STESIA
Trigger: TGCTATGGATTCAGTGCTTCACACACTGCAGATGTA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTATTTCCTTCTAAAATaGGCTGCTCCAGTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFYFLLK*AAPVSL
Trigger: TAGAGAAACTGGAGCAGCTCATTTTAGAAGGAAATA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAAACTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 2 (lower is better)
Translates to: VATMHSTITFLGNKMRLVRQTVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGTTTGTCT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680425.1
3UTR-3UTR GCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATG +
Preference number: 2 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFDSKVQ*SLRHKM
Trigger: CATTTTATGACGCAGCGAGCATTGTACCTTGCTGTC...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 2 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCTTATACAGCATTTCTaGCTTAGGGCATCAATATCT +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPLIQHF*LRASIS
Trigger: AGATATTGATGCCCTAAGCCAGAAATGCTGTATAAG...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR TCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATATCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 2 (lower is better)
Translates to: INCCNKVVLPLPVFPTIISSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAACAGCACTTTTCATCTaGTATCTGATCACCATTCTT +
Preference number: 2 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLTALFI*YLITIL
Trigger: AAGAATGGTGATCAGATATCAGATGAAAAGTGCTGT...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCCTTTTTCACAAGAAATaGGCCTTCACTTCCTTCACT +
Preference number: 2 (lower is better)
Translates to: VATMHSTITFLGNKMRLVLFHKK*AFTSFT
Trigger: AGTGAAGGAAGTGAAGGCTCATTTCTTGTGAAAAAG...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR TCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATATTCAGTAAATCTTCATaGTCAAAAATGGGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIFSKSS*SKMGPK
Trigger: CTTGGGGCCCATTTTTGATCATGAAGATTTACTGAA...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 2 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDITNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR-3UTR GCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTATGGAAAGATATTCATaGTCACAGACTGGAAGAATT +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPMERYS*SQTGRI
Trigger: AATTCTTCCAGTCTGTGAGCATGAATATCTTTCCAT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR GCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCAATGCACAAAACTCCTTaGTACAGCTTGTATCTTTGG +
Preference number: 2 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPMHKTP*YSLYLW
Trigger: CCAAAGATACAAGCTGTAGCAAGGAGTTTTGTGCAT...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTGCTGGGAAACTGATATaGACAAAACTCCTTGCTACA +
Preference number: 2 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLAGKLI*TKLLAT
Trigger: TGTAGCAAGGAGTTTTGTGCATATCAGTTTCCCAGC...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp TCGTCAACGCTTTTCGTACATCTTGTTCACGAGATCCACTATTCAGTAAGAGTTTCAGGAGAATGTATATaGTTCTGCATTAACTCCAAA +
Preference number: 2 (lower is better)
Translates to: SSTLFVHLVHEIHYSVRVSGECI*FCINSK
Trigger: TTTGGAGTTAATGCAGAAGCATATACATTCTCCTGA...AACTCTTACTGAATAGTGGATCTCGTGAACAAGATGTACGAAAAGCGTTGACGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: ITRISRRVERSRSKIWPPNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR TCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 2 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR GCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 2 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACCTTCAATAAATTGTaGTGGAAAAGCTGGATATCA +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTFNKL*WKSWIS
Trigger: TGATATCCAGCTTTTCCAGCACAATTTATTGAAGGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CCA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAAATTTCCCCATTTCATTaGGAAAGGATCTTAGTTCCA +
Preference number: 2 (lower is better)
Translates to: EESGIKVHSSNLDSTSSEISPFH*ERILVP
Trigger: TGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 2 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTGAGGACACAAACAAATaGAAAGATATTCATGCTCAC +
Preference number: 2 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSEDTNK*KDIHAH
Trigger: GTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTC...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR CCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCGGTACAAAAGACAGCTaGTTATATGACAGGTTAAAC +
Preference number: 2 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSGTKDS*LYDRLN
Trigger: GTTTAACCTGTCATATAACCAGCTGTCTTTTGTACC...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR GCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTATCCAGGGAAGTGTTaGTTCCTTCAAAAAGATGAT +
Preference number: 2 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFYPGKC*FLQKDD
Trigger: ATCATCTTTTTGAAGGAAGCAACACTTCCCTGGATA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 72 bp TGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAACCCTTGGAGGCTAAC +
Preference number: 3 (lower is better)
Translates to: CCRVLVRLALSC*SRRSKEPLEAN
Trigger: GTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAGCCTCACTAGAACCCTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 72 bp TCAGTGAGGAGGGCCAAACAGCTGAGCGCTGAGATCTaGAATGCTGCATTCTCTGGGTACTGCTGCACAGCT +
Preference number: 3 (lower is better)
Translates to: SVRRAKQLSAEI*NAAFSGYCCTA
Trigger: AGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR CCA 72 bp CTTTGTCCTGCTGAAGCAGGCGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCAACATCCGGGGACGAA +
Preference number: 3 (lower is better)
Translates to: LCPAEAGDPRNP*RLTPSPTSGDE
Trigger: TTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCTTCAGCAGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 72 bp TCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATGTGTAGCAACCATGCA +
Preference number: 3 (lower is better)
Translates to: SSVGVPTAQPNA*IPAVVMCSNHA
Trigger: TGCATGGTTGCTACACATCACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 72 bp AATAGTCTCAGTGAGGAGGGCCAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATTCTCTGGGTACTGCTG +
Preference number: 3 (lower is better)
Translates to: NSLSEEGQTAER*DLQCCILWVLL
Trigger: CAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCACTGAGACTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR CCA 72 bp GCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTG +
Preference number: 3 (lower is better)
Translates to: AASKDIKLGWWR*QSTTSSCLNSL
Trigger: CAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 3 (lower is better)
Translates to: SATWSAILCCRVLVRLALLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 3 (lower is better)
Translates to: SATWSAILCCRVLVRLALNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GTCTCAGTGAGGAGGGCCAAACAGCTGAGCGCTGAGATCTGCAATGCTGCATTCTTCTGGACTTCATCATaGGCTGGAAATGAGTGCATG +
Preference number: 3 (lower is better)
Translates to: VSVRRAKQLSAEICNAAFFWTSS*AGNECM
Trigger: CATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA...GAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCACTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR CAA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATACTCCTTGCTACAGCTaGTATCTTTGGGAGAGAGTG +
Preference number: 3 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDTPCYS*YLWERV
Trigger: CACTCTCTCCCAAAGATACAAGCTGTAGCAAGGAGT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 72 bp TATCTCAAACCATCAGCTACGTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGGCTGGCTTTGTCCTGC +
Preference number: 3 (lower is better)
Translates to: YLKPSATWSAIL*CRVLVRLALSC
Trigger: GCAGGACAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGATGGTTTGAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 72 bp AGCGCTGAGATCTGCAATGCTGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACAAACTCATGGACTTCG +
Preference number: 3 (lower is better)
Translates to: SAEICNAAFSGY*CTAFTTNSWTS
Trigger: CGAAGTCCATGAGTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR CCA 72 bp ATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAAC +
Preference number: 3 (lower is better)
Translates to: IPAASKDIKLGW*RWQSTTSSCLN
Trigger: GTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CCA 72 bp ATGGCTGAGTGGAGGTATCTCAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGG +
Preference number: 3 (lower is better)
Translates to: MAEWRYLKPSAT*SAILCCRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGATGGTTTGAGATACCTCCACTCAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAATTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 3 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 3 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CCA 72 bp ATTCCTCGGTGGCATTCACAAAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTATTCAGGAGTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: IPRWHSQSGNLV*QGTLAYSGVPW
Trigger: CCAAGGAACTCCTGAATAAGCGAGGGTTCCCTGCCATACGAGATTACCACTTTGTGAATGCCACCGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: EANSITNIRGRIPAASKDCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp CCTCCAAGGCAAATGCTATTGTTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: PPRQMLLLATSRASLLKSNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...GCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 3 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKERSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTATGCACAAAACTCCTaGCTACAGCTTGTATCTTTG +
Preference number: 3 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLYAQNS*LQLVSL
Trigger: CAAAGATACAAGCTGTAGCAAGGAGTTTTGTGCATA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 72 bp CTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTaGCAACGAGAATCACAGGGGAAGAAGAAGCGCGAG +
Preference number: 3 (lower is better)
Translates to: LCVASHQKHPNV*QRESQGKKKRE
Trigger: CTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR GCA 72 bp GCTGAGATCTGCAATGCTGCATTCTCTGGGTACTGCTaGACAGCTTTCACCACAAACTCATGGACTTCGTTT +
Preference number: 3 (lower is better)
Translates to: AEICNAAFSGYC*TAFTTNSWTSF
Trigger: AAACGAAGTCCATGAGTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR CCA 72 bp TTCCTATACAAAATCCTCCAAGGCAAATGCTATTGTTaGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAGC +
Preference number: 3 (lower is better)
Translates to: FLYKILQGKCYC*PHPGPASLRAS
Trigger: GCTTGCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGGATTTTGTATAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 3 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCAAAGATGCTGACAATTaGAGGATTGCTAAGATTGTC +
Preference number: 3 (lower is better)
Translates to: RSKEPLEANSITNIRGRIKDADN*RIAKIV
Trigger: GACAATCTTAGCAATCCTCAAATTGTCAGCATCTTT...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCCCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPPGKLP*MKNASA
Trigger: TGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGG...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTAGGCAAATGCTATTGTaGGCCACATCCAGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFRQMLL*ATSRAS
Trigger: GCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp CGAAGCGCCTCCAGCTGCACTGGTAATGATGTCTCATaGCGTTTCATAACTGTTAGTATTTTGGGGACCACT +
Preference number: 3 (lower is better)
Translates to: RSASSCTGNDVS*RFITVSILGTT
Trigger: AGTGGTCCCCAAAATACTAACAGTTATGAAACGTCATGAGACATCATTACCAGTGCAGCTGGAGGCGCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 72 bp TCCAGTGTGCGGGACCTGGTAGGTACTGAATATCATTaGTGCTCATATCTAAAGACCGCAAGTGTGGAAGAT +
Preference number: 3 (lower is better)
Translates to: SSVRDLVGTEYH*CSYLKTASVED
Trigger: ATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR GCA 72 bp CTGTCCCTTGCTGAGGTCATAGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATGGGGATGAGTACTATA +
Preference number: 3 (lower is better)
Translates to: LSLAEVIDSKVQ*SLRHKMGMSTI
Trigger: TATAGTACTCATCCCCATTTTATGACGCAGCGAGCATTGTACCTTGCTGTCTATGACCTCAGCAAGGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 3 (lower is better)
Translates to: HNRAILLSNIESSVYHHCNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATATGGAAACCAGAATTTTaGCCAGCAGATGTCCAGTTC +
Preference number: 3 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIWKPEF*PADVQF
Trigger: GAACTGGACATCTGCTGGCAAAAATTCTGGTTTCCA...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp CCACAGCCCAGCCAAATGCTTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCATTCAACAATTACGTTT +
Preference number: 3 (lower is better)
Translates to: PQPSQMLAFLLL*CVATMHSTITF
Trigger: AAACGTAATTGTTGAATGCATGGTTGCTACACATCACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 72 bp CAAGAAAGCTGTTATGGGAACCCAAAGCGGGAACTTTaGCCTAATCAGTGTTGGCTTCTCAGAGGTTTTGAC +
Preference number: 3 (lower is better)
Translates to: QESCYGNPKREL*PNQCWLLRGFD
Trigger: GTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCCGCTTTGGGTTCCCATAACAGCTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR GCA 72 bp GTTCAACTTTTCCTATACAAAATCCTCCAAGGCAAATaGTATTGTTGGCCACATCCAGGGCCAGCCTCCTTA +
Preference number: 3 (lower is better)
Translates to: VQLFLYKILQGK*YCWPHPGPASL
Trigger: TAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGGATTTTGTATAGGAAAAGTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATGCGCGAGCCTTTATATaGAAGAGCCAAGGCTTCATG +
Preference number: 3 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNARAFI*KSQGFM
Trigger: CATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCGC...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCATTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 3 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGCAGACACTGAATTTCTaGGTCATCTGGATACATCTG +
Preference number: 3 (lower is better)
Translates to: FILKSQGFMASTSACPLLQTLNF*VIWIHL
Trigger: CAGATGTATCCAGATGACCAAGAAATTCAGTGTCTG...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp TATCAATCTCCAGCAACCCAGGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCACAACTTGGCCCAAAA +
Preference number: 3 (lower is better)
Translates to: YQSPATQETILP*ENQCGPQLGPK
Trigger: TTTTGGGCCAAGTTGTGGACCACATTGATTCTCTCATGGAAGAATGGTTTCCTGGGTTGCTGGAGATTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 72 bp CCTGAGGCTGTTCCTTCTTCCACAGCACTTTTCATCTaGTATCTGATCACCATTCTTGCTAGTGTAGATGCT +
Preference number: 3 (lower is better)
Translates to: PEAVPSSTALFI*YLITILASVDA
Trigger: AGCATCTACACTAGCAAGAATGGTGATCAGATATCAGATGAAAAGTGCTGTGGAAGAAGGAACAGCCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp GAGCCTTCACTTCCTTCACTATCCAGGTCATCACTTTaGGCAAACACACTGTCCATAGAAGAGTCAGGAATA +
Preference number: 3 (lower is better)
Translates to: EPSLPSLSRSSL*ANTLSIEESGI
Trigger: TATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGATAGTGAAGGAAGTGAAGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 72 bp AGTGTGCGGGACCTGGTAGGTACTGAATATCATTGCTaGTCATATCTAAAGACCGCAAGTGTGGAAGATTTA +
Preference number: 3 (lower is better)
Translates to: SVRDLVGTEYHC*SYLKTASVEDL
Trigger: TAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATATTCAGTACCTACCAGGTCCCGCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CCA 72 bp CACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCACTGTCAAAATCTGTGC +
Preference number: 3 (lower is better)
Translates to: HISTRNNALRVF*TTFHFHCQNLC
Trigger: GCACAGATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
3UTR CCA 72 bp ATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATCCAAAGAGCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: ISRRVERSRSKI*PPPVPIQRAVF
Trigger: GAACACTGCTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGTCTTTTGTCTCTTATTaGGATAGGCCAGTCTTTCAC +
Preference number: 3 (lower is better)
Translates to: FILKSQGFMASTSACPLLSFVSY*DRPVFH
Trigger: GTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGA...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 3 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp TCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTGCATCCAACCATTAAGCTTTGCATaGTACCTGGACAGACTTCTA +
Preference number: 3 (lower is better)
Translates to: SVAPLRLSQTAHVKLCIQPLSFA*YLDRLL
Trigger: TAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGG...TTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTCTACAGCTTGTATCTTaGGGAGAGAGTGCCGGTCTT +
Preference number: 3 (lower is better)
Translates to: LQILPDNKLQETNLSKCLLQLVS*GESAGL
Trigger: AAGACCGGCACTCTCTCCCAAAGATACAAGCTGTAG...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp CTAGGTATGACCATTAGGATCATTGTGAGATTCAGCTaGGATGACACACTGACCATACACAAGCTTCAAGGT +
Preference number: 3 (lower is better)
Translates to: LGMTIRIIVRFS*DDTLTIHKLQG
Trigger: ACCTTGAAGCTTGTGTATGGTCAGTGTGTCATCTCAGCTGAATCTCACAATGATCCTAATGGTCATACCTAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR GCA 72 bp CCAGACACAATCCAGCTTTCCTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAATATTCTACTATCAGCA +
Preference number: 3 (lower is better)
Translates to: PDTIQLSFSTGR*TKAKHNILLSA
Trigger: TGCTGATAGTAGAATATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAAGGAAAGCTGGATTGTGTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCGCGCGAGCCTTTATATaGAAGAGCCAAGGCTTCATG +
Preference number: 3 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFARAFI*KSQGFM
Trigger: CATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCGC...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 3 (lower is better)
Translates to: HNRAILLSNIESSVYHHCLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 3 (lower is better)
Translates to: VATMHSTITFLGNKMRLVANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GAAGAGGACACAAACAAATGGAAAGATATTCATGCTCACAGACTGGAAGAATTACTCGTGAAGCTGATGTaGGAGGATCACTTGAGTGCA +
Preference number: 3 (lower is better)
Translates to: EEDTNKWKDIHAHRLEELLVKLM*EDHLSA
Trigger: TGCACTCAAGTGATCCTCCAACATCAGCTTCACGAG...TAATTCTTCCAGTCTGTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTACCACCTTCAATAAATaGTGCTGGAAAAGCTGGATA +
Preference number: 3 (lower is better)
Translates to: HNRAILLSNIESSVYHHCTTFNK*CWKSWI
Trigger: TATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR TCA 72 bp AAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGATTTACTAAGAGATCTC +
Preference number: 3 (lower is better)
Translates to: KSSQGQSEILEW*ALVDLDLLRDL
Trigger: GAGATCTCTTAGTAAATCCAGATCAACCAAGGCTCACCATTCCAATATCTCAGATTGCCCCTGACTTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR TCA 72 bp TGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTaGATTTGTGGATTCACTCAAACACATCAATGGAGT +
Preference number: 3 (lower is better)
Translates to: CATSSPHYISFR*ICGFTQTHQWS
Trigger: ACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR GCA 72 bp ATTAAGGCTCTCGTTTATGATGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTCGGTGGCATTCACAAA +
Preference number: 3 (lower is better)
Translates to: IKALVYDGFPKF*QSIRFLGGIHK
Trigger: TTTGTGAATGCCACCGAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACCATCATAAACGAGAGCCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CCA 72 bp CATTCTTCCATGAGAGAATCAATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCTTTTCTACAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: HSSMRESMWSTT*PKRIQPFLQEG
Trigger: TCCTTCTTGTAGAAAAGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATTGATTCTCTCATGGAAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 3 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CAA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 3 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 3 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 3 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATATAACTGTTAGTATTTaGGGGACCACTGCTGCCATT +
Preference number: 3 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNITVSI*GTTAAI
Trigger: AATGGCAGCAGTGGTCCCCAAAATACTAACAGTTAT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: KEKIFVPHPPHITFLSVECKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 3 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
ENST00000680425.1
3UTR-3UTR CAA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAAGAGTTCCACCAATTaGGGACTGCTCTCTTTCTCA +
Preference number: 3 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIKSSTN*GLLSFS
Trigger: TGAGAAAGAGAGCAGTCCCAAATTGGTGGAACTCTT...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp AGTGAGGTTCTCAGGTACAAAAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAGAGTTGGACATTTCAC +
Preference number: 3 (lower is better)
Translates to: SEVLRYKRQLVI*QVKLFQSWTFH
Trigger: GTGAAATGTCCAACTCTGAAACAGTTTAACCTGTCATATAACCAGCTGTCTTTTGTACCTGAGAACCTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CCA 72 bp TTTAGGACGAGATCTCTCTTTCTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACATCTATGCCAACTGTG +
Preference number: 3 (lower is better)
Translates to: FRTRSLFLLSLI*IGQSFTSMPTV
Trigger: CACAGTTGGCATAGATGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCTCGTCCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CCA 72 bp CCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTaGTACATAAGGAGATTATTTAGTGCCCAGCATGCG +
Preference number: 3 (lower is better)
Translates to: PSSSPIFSCKLF*YIRRLFSAQHA
Trigger: CGCATGCTGGGCACTAAATAATCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGC +
Preference number: 3 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIRSLFL*SLIWIG
Trigger: GCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCCAAAACAGCACAGTATaGGCAAAAACACAGGTAGGT +
Preference number: 3 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFIQNSTV*AKTQVG
Trigger: ACCTACCTGTGTTTTTGCCAATACTGTGCTGTTTTG...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR TCA 72 bp TTTCATTGGGAAAGGATCTTAGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGATTTTCAAGACAGCCAA +
Preference number: 3 (lower is better)
Translates to: FHWERILVPSCN*HPEMSDFQDSQ
Trigger: TTGGCTGTCTTGAAAATCTGACATCTCTGGATGTCAGTTACAACTTGGAACTAAGATCCTTTCCCAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR TCA 72 bp AGAGAAGAAATGCTGTCTGAATGCCTCATATGGGATTaGAGTTTTGATGACCTGAGTGAATCATCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: REEMLSECLIWD*SFDDLSESSED
Trigger: ATCTTCAGATGATTCACTCAGGTCATCAAAACTTCAATCCCATATGAGGCATTCAGACAGCATTTCTTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR GCA 72 bp ATACATGGGAGAAAGAATACCACCTTCAATAAATTGTaGTGGAAAAGCTGGATATCAGTATGCAGAAGGATG +
Preference number: 3 (lower is better)
Translates to: IHGRKNTTFNKL*WKSWISVCRRM
Trigger: CATCCTTCTGCATACTGATATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGTATTCTTTCTCCCATGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR GCA 72 bp TTACAGCCACTTTCAGCCACTTCAGGAGAATGTATATaGTTCTGCATTAACTCCAAAACATTCAGGTGTATT +
Preference number: 3 (lower is better)
Translates to: LQPLSATSGECI*FCINSKTFRCI
Trigger: AATACACCTGAATGTTTTGGAGTTAATGCAGAAGCATATACATTCTCCTGAAGTGGCTGAAAGTGGCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CCA 72 bp GTAAAGCTTTGCATCCAAGTTTCTGGACTTCATCATTaGCTGGAAATGAGTGCATGGCATCAAAAATTAACA +
Preference number: 3 (lower is better)
Translates to: VKLCIQVSGLHH*LEMSAWHQKLT
Trigger: TGTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644108.1
3UTR-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CAA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: VATMHSTITFLGNKMRLVCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
3UTR-3UTR CAA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 3 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 3 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
3UTR CCA 72 bp CAAGCCTCAAGAAAGTTCTCTGATAGGGATGAAATGTaGTTCTTACTAAGGTTTAAAATCTTCAGTTCCTTC +
Preference number: 3 (lower is better)
Translates to: QASRKFSDRDEM*FLLRFKIFSSF
Trigger: GAAGGAACTGAAGATTTTAAACCTTAGTAAGAACCACATTTCATCCCTATCAGAGAACTTTCTTGAGGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR-3UTR CAA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 3 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 3 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430804.5
3UTR-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGTTTCAATATGCTCTaGAGTTCCATGGTACAGGAT +
Preference number: 3 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRCFNML*SSMVQD
Trigger: ATCCTGTACCATGGAACTCAAGAGCATATTGAAACA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679532.1
3UTR-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTTTGTTCTAAGAGAGTaGACAATGCATTCGCAGATG +
Preference number: 3 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVFVLRE*TMHSQM
Trigger: CATCTGCGAATGCATTGTCAACTCTCTTAGAACAAA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR TCA 72 bp AATGACCATACTACCCAAAGCAATCTACAGATTCAATaGAATTCCCATGAAAGCTCCAATGATATTTCTCAC +
Preference number: 3 (lower is better)
Translates to: NDHTTQSNLQIQ*NSHESSNDISH
Trigger: GTGAGAAATATCATTGGAGCTTTCATGGGAATTTCATTGAATCTGTAGATTGCTTTGGGTAGTATGGTCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR CCA 72 bp AAAGGGGTAAACAAAAACACACTAACCCAACCGTCTTaGAGTTTATATTCTAGTGAAGAGACTAGCATTAAT +
Preference number: 3 (lower is better)
Translates to: KGVNKNTLTQPS*SLYSSEETSIN
Trigger: ATTAATGCTAGTCTCTTCACTAGAATATAAACTCCAAGACGGTTGGGTTAGTGTGTTTTTGTTTACCCCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGGCCGCCCTCCCAGCATaGACGTCCGCTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: CANENHRGRRSASLYIEEAALPA*TSAAQG
Trigger: TCCCTGAGCAGCGGACGTTCATGCTGGGAGGGCGGC...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACATCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCACAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATT +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAQTAER*DLQCCI
Trigger: AATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTG...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTGCGGCCTCCTGCACGTaGTTGTTCTTTCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSAASCT*LFFLCH
Trigger: GTGGCATAGAAAGAACAAGCACGTGCAGGAGGCCGC...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATCGAAGCGCCTCCAGCTaGACTGGTAATGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDRSASS*TGNDVS
Trigger: TGAGACATCATTACCAGTGCAGCTGGAGGCGCTTCG...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAGTGAGTGCATTCTGGTaGAGCTCCAGCTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGVSAFW*SSSFSR
Trigger: TCTTGAAAAGCTGGAGCTTCACCAGAATGCACTCAC...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAACCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRIWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTGCCTTGAAATAACTTaGAGGCGCGCTCGGAGTACG +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKCLEIT*RRARST
Trigger: CGTACTCCGAGCGCGCCTCCAAGTTATTTCAAGGCA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTCGCGCTCGGAGTACGTaGACACCAGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: STSLREIMPLGCFGQPSTRARST*TPADPP
Trigger: TGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCG...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGATCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGAGTGCCGGTCTTATaGTGTTTGAATGGCACTCCT +
Preference number: 4 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTRVPVL*CLNGTP
Trigger: AGGAGTGCCATTCAAACATCATAAGACCGGCACTCT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAATGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAACACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTECPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATCAATGCTGCATTCTCTaGGTACTGCTGCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDQCCIL*VLLHSF
Trigger: AAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTG...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSRAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRISITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSGARNPGVPSDVFIPILLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGATACAGCTTGTATCTTTaGGAGAGAGTGCCGGTCTTA +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGYSLYL*ERVPVL
Trigger: TAAGACCGGCACTCTCTCCCAAAGATACAAGCTGTA...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCTCTATCACAGGCCTGTaGTCAGACAAACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRISITGL*SDKLCH
Trigger: ATGGCACAGTTTGTCTGACCACAGGCCTGTGATAGA...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGCCGCCCTCCCAGCATaGACGTCCGCTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSAALPA*TSAAQG
Trigger: TCCCTGAGCAGCGGACGTTCATGCTGGGAGGGCGGC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR TCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATGGACATTGTTCAGCCTaGCTATCAACTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDGHCSA*LSTSSE
Trigger: CTCTGAAGAAGTTGATAGTCAGGCTGAACAATGTCC...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp ACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTCGCGCTCGGAGTACGTaGACACCAGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSQSFPTSWGPIKLCIVPRARST*TPADPP
Trigger: TGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCG...AGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAGTCAGTTGCTCCTCTaGGACTCTCTCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPASQLLL*DSLKQH
Trigger: GTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACT...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTGGACAGACTTCTGGAGGGCCAAACAGCTaGGCGCTGAGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: FPTSWGPIKLCIVPGQTSGGPNS*ALRSAM
Trigger: CATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCC...AGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCCGCGAGCCTTTATATTaGAGAGCCAAGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAREPLY*RAKASW
Trigger: CCATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCG...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRIQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTAGTGACCAACCCACCTaGTGCACACTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: STSLREIMPLGCFGQPSTSDQPT*CTLATL
Trigger: GAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTCACT...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRISSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCATGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATATTCTGTATCCTCCCTaGATTCTTCTGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDILYPP*ILLACQ
Trigger: CTGGCATGCCAGAAGAATCCAGGGAGGATACAGAAT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATGCTTCAAGGTCCTTTTaGATGCTCCTCTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDASRSF*MLLFPD
Trigger: GTCTGGAAAGAGGAGCATCCAAAAGGACCTTGAAGC...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR CCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTCTATCACAGGCCTGTaGTCAGACAAACTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSSITGL*SDKLCH
Trigger: ATGGCACAGTTTGTCTGACCACAGGCCTGTGATAGA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp ATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGACAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: MQALRCFSSETSKCVPTRQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...TCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRIMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCAGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGACAAACTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTRQTVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGTTTGTCT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGAGCATGAACGTCCGCTaGTCAGGGAACCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQSMNVR*SGNRQG
Trigger: CCCCTGCCGGTTCCCTGAGCAGCGGACGTTCATGCT...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGCCATGGTGGCACCTaGTTCCAACCCGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSHGGT*FQPAAL
Trigger: GAGGGCGGCGGGTTGGAAGCAGGTGCCACCATGGCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAAGCCATGGTGGCACCTaGTTCCAACCCGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLSHGGT*FQPAAL
Trigger: GAGGGCGGCGGGTTGGAAGCAGGTGCCACCATGGCT...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGCCATGGTGGCACCTaGTTCCAACCCGCCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSHGGT*FQPAAL
Trigger: GAGGGCGGCGGGTTGGAAGCAGGTGCCACCATGGCT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAACAAATTCAGTCAGTTaGTCCTCTGAGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQTNSVS*SSETLS
Trigger: TGAGAGAGTCTCAGAGGAGCAACTGACTGAATTTGT...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCCCTTCTAAAATGAGCTaGTCCAGTTTCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSPSKMS*SSFSTT
Trigger: TGTGGTAGAGAAACTGGAGCAGCTCATTTTAGAAGG...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTATCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCATCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATAAGAATGCATCAGCATaGAGAGCATCACTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDKNASA*RASLPY
Trigger: ATAGGGAAGTGATGCTCTCCATGCTGATGCATTCTT...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGGGCAAATGCTATTGTTaGCCACATCCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FILKSQGFMASTSACPLLGKCYC*PHPGPA
Trigger: GGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCC...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGCATCTATGCCAACTGTaGCACTTTGCATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLHLCQL*HFAFQD
Trigger: ATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATG...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCATACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCTTCAATTTCCTCAATTaGGCAGAGGTCATACCTGTC +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSFNFLN*AEVIPV
Trigger: GACAGGTATGACCTCTGCCCAATTGAGGAAATTGAA...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp CACCAAGGACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCAAGTCAGTTGCTCCTCTaGGACTCTCTCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: HQGLPNHFQHPGVPLSFASQLLL*DSLKQH
Trigger: GTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACT...TGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGTCCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATCTTTTTCACAAGAAATaGGCCTTCACTTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: EANSITNIRGRIPAASKDLFHKK*AFTSFT
Trigger: AGTGAAGGAAGTGAAGGCTCATTTCTTGTGAAAAAG...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGCGCGAGCCTTTATATTaGAGAGCCAAGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQREPLY*RAKASW
Trigger: CCATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCG...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPASGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAATCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQSKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
CDS-3UTR TCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAACCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTATGAGCTGGGAAACTaGTATGCACAAAACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALYELGN*YAQNSL
Trigger: CAAGGAGTTTTGTGCATATCAGTTTCCCAGCTCATA...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGCATGAACGTCCGCTaGTCAGGGAACCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSMNVR*SGNRQG
Trigger: CCCCTGCCGGTTCCCTGAGCAGCGGACGTTCATGCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTGCAAGACTCCATCTCTaGTGCACACTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: TSQSFPTSWGPIKLCIVPARLHL*CTLATL
Trigger: GAGAGTCGCGAGTGTGCAGCAGAGATGGAGTCTTGC...AGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp CAGTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTGCATCTGCCTTGAAATAACTTaGAGGCGCGCTCGGAGTACG +
Preference number: 4 (lower is better)
Translates to: QSVAPLRLSQTAHVKLCICLEIT*RRARST
Trigger: CGTACTCCGAGCGCGCCTCCAAGTTATTTCAAGGCA...GATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTCATTTCCAACATCCTaGGGTCCCATTAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPASFPTS*GPIKLC
Trigger: GCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCAATTTCTTGGTCATCTaGATACATCTGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSNFLVI*IHLQCV
Trigger: CACACACTGCAGATGTATCCAGATGACCAAGAAATT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CCTCCAAGGCAAATGCTATTGTTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PPRQMLLLATSRASLLKSIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...GCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGERAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCTACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: CANENHRGRRSASLYIEEDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVAILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCCTCTTCGCACCCCTaGCAGCTGCCACTAGCCATG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSSSHP*QLPLAM
Trigger: CATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTATCCTCTTCGCACCCCTaGCAGCTGCCACTAGCCATG +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLSSSHP*QLPLAM
Trigger: CATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGA...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCGCGCTCGGAGTACGTaGACACCAGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYRARST*TPADPP
Trigger: TGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATTTAAGAATCAATTGGTaGACACCAAGGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDLRINW*TPRTSQ
Trigger: TTGGGAAGTCCTTGGTGTTCACCAATTGATTCTTAA...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCATGATGCTGTTATTCTaGTCACACGCTCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPMMLLF*SHALSS
Trigger: GCTAGAGAGAGCGTGTGATCAGAATAACAGCATCAT...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CANENHRGRRSASLYIEEKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGCAGGAGAGGTACAGTaGAGCCAGCTCATGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQAGEVQ*SQLMQH
Trigger: GTGCTGCATGAGCTGGCTTCACTGTACCTCTCCTGC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGAAGCCAGAGAAGAAATaGTGTCTGAATGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKKPEKK*CLNASY
Trigger: ATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTT...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: SRRSKEPLEANSITNIRGTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTAGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAATGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCACTCCCTGGATTCTTCTaGCATGCCAGGCACTATAAA +
Preference number: 4 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPLPGFF*HARHYK
Trigger: TTTATAGTGCCTGGCATGCCAGAAGAATCCAGGGAG...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CANENHRGRRSASLYIEESITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAACTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVELGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: SATWSAILCCRVLVRLALFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCCTCTTCGCACCCCTaGCAGCTGCCACTAGCCATG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSSSHP*QLPLAM
Trigger: CATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAGGAGGGCCAAACAGCTaGGCGCTGAGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLGGPNS*ALRSAM
Trigger: CATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCC...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGAAGAAATGCTGTCTaGATGCCTCATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPRRNAV*MPHMGL
Trigger: CAATCCCATATGAGGCATTCAGACAGCATTTCTTCT...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGCAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDILALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAACAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTAGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ACTCACTTCTTGAATTCTTTCACTCATAGGGAATGCTTTCATAGCTTCCACCACGCGGCCTCCTGCACGTaGTTGTTCTTTCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: THFLNSFTHRECFHSFHHAASCT*LFFLCH
Trigger: GTGGCATAGAAAGAACAAGCACGTGCAGGAGGCCGC...GTGGTGGAAGCTATGAAAGCATTCCCTATGAGTGAAAGAATTCAAGAAGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: RSKEPLEANSITNIRGRITNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: STSLREIMPLGCFGQPSTSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTAGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTELNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACATTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCGCGCTCGGAGTACGTaGACACCAGCAGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRRARST*TPADPP
Trigger: TGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEVPSCN*HPEMSD
Trigger: ATCTGACATCTCTGGATGTCAGTTACAACTTGGAAC...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LQILPDNKLQETNLSKCLLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAACACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGERFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTERFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGACCAACCCACCTGCTaGACACTCGCGACTCTCATA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSDQPTC*TLATLI
Trigger: TATGAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGTGACCAACCCACCTaGTGCACACTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSDQPT*CTLATL
Trigger: GAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTCACT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp CAGTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTGCATCGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACT +
Preference number: 4 (lower is better)
Translates to: QSVAPLRLSQTAHVKLCIGPIKL*IVPGQT
Trigger: AGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC...GATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGAAAAATTTCCATCGCTaGCTGAGGCTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEKNFHR*LRLFLL
Trigger: AAGAAGGAACAGCCTCAGGCAGCGATGGAAATTTTT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATTGGAAAGCTCGTGAGTaGATTCTGGTGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNWKARE*ILVKLQ
Trigger: CTGGAGCTTCACCAGAATGCACTCACGAGCTTTCCA...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGDSKVQ*SLRHKM
Trigger: CATTTTATGACGCAGCGAGCATTGTACCTTGCTGTC...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: STSLREIMPLGCFGQPSTMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR GCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SSETSKCVPTRITGEEEAVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCACAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGETSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTCACAGGCACAGAAATaGTTTCCTGACTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCSQAQK*FPDSTV
Trigger: GACTGTGGAGTCAGGAAAGCATTTCTGTGCCTGTGA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGATCTGTTTTCCTTCCTaGACATTGTTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEICFPS*TLFSLT
Trigger: AGTCAGGCTGAACAATGTCCAGGAAGGAAAACAGAT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTCCTAATGTAAGCCTATaGAGCAAACAGCAACTCACT +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRPNVSL*SKQQLT
Trigger: AGTGAGTTGCTGTTTGCTCCATAGGCTTACATTAGG...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp ACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTCAATGCTGCATTCTCTaGGTACTGCTGCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TSQSFPTSWGPIKLCIVPQCCIL*VLLHSF
Trigger: AAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTG...AGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAACTGTTTCAGAGTTaGACATTTCACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAKLFQS*TFHCRI
Trigger: GATCCTACAGTGAAATGTCCAACTCTGAAACAGTTT...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAACATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAGATCCCTCCTTTGCTTGATTGGCATCTGCTCCCAATAGAAGCAAGCATTCAATCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KIPPLLDWHLLPIEASIQSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...TTGAATGCTTGCTTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATACCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: SSETSKCVPTRITGEEEAMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPILNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTGCAAGAAAGCTGTTATaGGAACCCAAAGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCARKLL*EPKAGT
Trigger: AGTTCCCGCTTTGGGTTCCCATAACAGCTTTCTTGC...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTAGCTTCAAATAACCCTTaGCCATCTTCATCTCCAATC +
Preference number: 4 (lower is better)
Translates to: TSGARNPGVPSDVFIPILASNNP*PSSSPI
Trigger: GATTGGAGATGAAGATGGCCAAGGGTTATTTGAAGC...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCCAATATCAGCAAGGTaGTTTTACCTGAAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEPISAR*FYLKLG
Trigger: TCCTAACTTCAGGTAAAATCACCTTGCTGATATTGG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGAGGGCCAAACAGCTaGGCGCTGAGATCTGCAATG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGGPNS*ALRSAM
Trigger: CATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGATCCCTCCTTTGCTTaGTTGGCATCTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFDPSFA*LASAPN
Trigger: ATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAATTTCCATCGCTGCCTaGGGCTGTTCCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSISIAA*GCSFFH
Trigger: GTGGAAGAAGGAACAGCCTCAGGCAGCGATGGAAAT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGTTGTGGAAAGCTCGTaGGTGCATTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEVVESS*VHSGEA
Trigger: AGCTTCACCAGAATGCACTCACGAGCTTTCCACAAC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CANENHRGRRSASLYIEERQLVI*QVKLFQ
Trigger: CTGAAACAGTTTAACCTGTCATATAACCAGCTGTCT...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTECPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTAAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGCTTCTCTTGTGGGACTaGGAGCATTTACTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQLLLWD*EHLLPP
Trigger: TGGAGGGAGTAAATGCTCTCAGTCCCACAAGAGAAG...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTATGATCATGCCACTGTaGGCCAGCCTTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFMIMPL*ASLNSL
Trigger: AAGACTGTTAAGGCTGGCTCACAGTGGCATGATCAT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp GATATGCACAAAACTCCTTGCTACAGCTTGTATCTTTGGGAGAGAGTGCCGGTCAGAGTTATCCAGAGATaGCAGCTTCAAATAACCCTT +
Preference number: 4 (lower is better)
Translates to: DMHKTPCYSLYLWERVPVRVIQR*QLQITL
Trigger: AAGGGTTATTTGAAGCTGTCATCTCTGGATAACTCT...GACCGGCACTCTCTCCCAAAGATACAAGCTGTAGCAAGGAGTTTTGTGCATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAAGACCAACCCACCTGCTaGACACTCGCGACTCTCATA +
Preference number: 4 (lower is better)
Translates to: EESGIKVHSSNLDSTSSEDQPTC*TLATLI
Trigger: TATGAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTC...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGTGACCAACCCACCTaGTGCACACTCGCGACTCTC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSDQPT*CTLATL
Trigger: GAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTCACT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGCGGCCTCCTGCACGTaGTTGTTCTTTCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCAASCT*LFFLCH
Trigger: GTGGCATAGAAAGAACAAGCACGTGCAGGAGGCCGC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGCCTTCTAAAATGAGCTaGTCCAGTTTCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: FILKSQGFMASTSACPLLPSKMS*SSFSTT
Trigger: TGTGGTAGAGAAACTGGAGCAGCTCATTTTAGAAGG...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAACACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGTCCTCTGTCGGTGTaGCCACAGCCCAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCPLSV*PQPSQM
Trigger: CATTTGGCTGGGCTGTGGGCACACCGACAGAGGACA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPADCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR GCA 90 bp GATCTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAACTGAGACTCCATCTCTGCTaGACACTCGCGACTCTCATA +
Preference number: 4 (lower is better)
Translates to: DLRSSVQSLTSLHWHYELRLHLC*TLATLI
Trigger: TATGAGAGTCGCGAGTGTGCAGCAGAGATGGAGTCT...CAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGGCAAATGCTATTGTTaGCCACATCCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCGKCYC*PHPGPA
Trigger: GGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCTTCATGATCAAAAATaGGCCCCAAGGAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTELHDQK*APRNWN
Trigger: ATTCCAATTCCTTGGGGCCCATTTTTGATCATGAAG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTGGGGTGGTGGAGGTaGCAAAGCACCACAAGCTCT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLGWWR*QSTTSS
Trigger: AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAGATCCCTCCTTTGCTTGATTGGCATCTGCTCCCAATAGAAGCAAGCATTCAATCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: KIPPLLDWHLLPIEASIQSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...TTGAATGCTTGCTTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CAA 72 bp GAGTTCCTTGGTGATTTTACTCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATCCAAATGTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: EFLGDFTHAGFA*LLIRNIQMCAN
Trigger: GTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 72 bp AAATGGGCCCCAAGGAATTGGAATGTCTTTGCAAATTaGGTGAGCAACGCTGTAATACGGCATCTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: KWAPRNWNVFAN*VSNAVIRHLGK
Trigger: TTTACCGAGATGCCGTATTACAGCGTTGCTCACCAAATTTGCAAAGACATTCCAATTCCTTGGGGCCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp CAGTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTGCATCCCAATATCAGCAAGGTaGTTTTACCTGAAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: QSVAPLRLSQTAHVKLCIPISAR*FYLKLG
Trigger: TCCTAACTTCAGGTAAAATCACCTTGCTGATATTGG...GATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSQTAER*DLQCCI
Trigger: AATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp CTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAACTGTTACAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATT +
Preference number: 4 (lower is better)
Translates to: LRSSVQSLTSLHWHYELLQTAER*DLQCCI
Trigger: AATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTG...TAACAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGCATCACTTCCCTATaGGCTGGGAAATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSITSL*AGKWPS
Trigger: AGATGGCCATTTCCCAGCTCATAGGGAAGTGATGCT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGCATCACTTCCCTATaGGCTGGGAAATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSITSL*AGKWPS
Trigger: AGATGGCCATTTCCCAGCTCATAGGGAAGTGATGCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAGTGTGTGAAGCACTaGATCCATAGCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQCVKH*IHSTFQ
Trigger: CTGGAAGGTGCTATGGATTCAGTGCTTCACACACTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGATCCCTCCTTTGCTTaGTTGGCATCTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSDPSFA*LASAPN
Trigger: ATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGTTGTGGAAAGCTCGTaGGTGCATTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSVVESS*VHSGEA
Trigger: AGCTTCACCAGAATGCACTCACGAGCTTTCCACAAC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCAGCCTGTCCCTTGCTaGGGTCATAGACAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRQPVPC*GHRQQG
Trigger: ACCTTGCTGTCTATGACCTCAGCAAGGGACAGGCTG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATATCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGISKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
CDS-3UTR TCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCTCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPISKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR TCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCTGGCTTTGTCCTGCTaGAGCAGGCGATCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLALSC*SRRSKE
Trigger: TTCCTTGGATCGCCTGCTTCAGCAGGACAAAGCCAG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR TCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR TCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACAGAGAGTTTCTGTaGCAAAGAGAGTTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHHREFL*QREFLC
Trigger: ACACAGAAACTCTCTTTGTCACAGAAACTCTCTGTG...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGCTGAGATGACACACTaGCCATACACAAGCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQAEMTH*PYTSFK
Trigger: CTTGAAGCTTGTGTATGGTCAGTGTGTCATCTCAGC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGACCAACCCACCTGCTaGACACTCGCGACTCTCATA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFDQPTC*TLATLI
Trigger: TATGAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGTTCTTTCTATGCCACGTTAATGCTTTGTAACAGGCTTCCAGCCAAAACAATTGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACA +
Preference number: 4 (lower is better)
Translates to: CSFYATLMLCNRLPAKTIAFSGY*CTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGC...AATTGTTTTGGCTGGAAGCCTGTTACAAAGCATTAACGTGGCATAGAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACA +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLAFSGY*CTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGC...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSAFSGY*CTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCGGCCTCCTGCACGTaGTTGTTCTTTCTATGCCAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFAASCT*LFFLCH
Trigger: GTGGCATAGAAAGAACAAGCACGTGCAGGAGGCCGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCGAAGCGCCTCCAGCTaGACTGGTAATGATGTCTCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRSASS*TGNDVS
Trigger: TGAGACATCATTACCAGTGCAGCTGGAGGCGCTTCG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAGAAGATCCCTCCTTTaGTTGATTGGCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPRRSLL*LIGICS
Trigger: GGAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTAAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR GCA 90 bp ATATATTCTCTCTCAGAAGCCAGAGAAGAAATGCTGTCTGAATGCCTCATATGGGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: IYSLSEAREEMLSECLIWGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...CCATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTTCTGAGAGAGAATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR GCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAACACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCTGGCAACTTCAGGTaGACGAAACCCTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSGNFR*TKPWCA
Trigger: GGCACACCAGGGTTTCGTGCACCTGAAGTTGCCAGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKETSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGGAAATAAACAGCATGTaGAAATCCCTGAGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQEINSM*KSLRQN
Trigger: ATTTTGCCTCAGGGATTTGCACATGCTGTTTATTTC...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGATGCACAAAACTCCTTaGTACAGCTTGTATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SSETSKCVPTRITGEEEAMHKTP*YSLYLW
Trigger: CCAAAGATACAAGCTGTAGCAAGGAGTTTTGTGCAT...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGCAAATGCTATTGTTaGCCACATCCAGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGKCYC*PHPGPA
Trigger: GGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCAATTTCCCCATTTCATTaGGAAAGGATCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPISPFH*ERILVP
Trigger: TGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVESGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp ATATATTCTCTCTCAGAAGCCAGAGAAGAAATGCTGTCTGAATGCCTCATATGGGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IYSLSEAREEMLSECLIWAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...CCATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTTCTGAGAGAGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCAATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTATTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: GNFDLISVGFSEVLTQELFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680422.1
3UTR CAA 72 bp TTCAGGAGTTCCTTGGTGATTTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAAACATCCAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: FRSSLVILLMQA*RCFSSETSKCV
Trigger: CACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 72 bp CCATTCTTCCATGAGAGAATCAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCCTTTTCTACAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PFFHERINVVHN*AQKNTAFSTRR
Trigger: CCTTCTTGTAGAAAAGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATTGATTCTCTCATGGAAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
3UTR CAA 72 bp AGTTTTCTTATCCCACACTTCCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGCAGTGTCTACCACCAC +
Preference number: 4 (lower is better)
Translates to: SFLIPHFHNRAI*LSNIESSVYHH
Trigger: GTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTGTGGGATAAGAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
3UTR CAA 72 bp TTGACAATGCATTCGCAGATGCCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCATGGAGAGCATCACTT +
Preference number: 4 (lower is better)
Translates to: LTMHSQMPGKLP*MKNASAWRASL
Trigger: AAGTGATGCTCTCCATGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGGCATCTGCGAATGCATTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 72 bp TCTCACATACCTGACAAATTAAAGAAGATCCCTCCTTaGCTTGATTGGCATCTGCTCCCAATAGAAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SHIPDKLKKIPP*LDWHLLPIEAS
Trigger: GCTTGCTTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCTTTAATTTGTCAGGTATGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp ACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTTTAAGAATCAATTGGTaGACACCAAGGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: TSQSFPTSWGPIKLCIVPLRINW*TPRTSQ
Trigger: TTGGGAAGTCCTTGGTGTTCACCAATTGATTCTTAA...AGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp ACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATTGTACCTATCATTGGCTGGAAATaGGTGCATGGCATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: TSQSFPTSWGPIKLCIVPIIGWK*VHGIKN
Trigger: ATTTTTGATGCCATGCACTCATTTCCAGCCAATGAT...AGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGTCAGTTGCTCCTCTaGGACTCTCTCAAACAGCAC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSQLLL*DSLKQH
Trigger: GTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAGTGTGTGAAGCACTaGATCCATAGCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQCVKH*IHSTFQ
Trigger: CTGGAAGGTGCTATGGATTCAGTGCTTCACACACTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAACAGTGTGTGAAGCACTaGATCCATAGCACCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EESGIKVHSSNLDSTSSEQCVKH*IHSTFQ
Trigger: CTGGAAGGTGCTATGGATTCAGTGCTTCACACACTG...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGATCCCTCCTTTGCTTaGTTGGCATCTGCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCDPSFA*LASAPN
Trigger: ATTGGGAGCAGATGCCAATCAAGCAAAGGAGGGATC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCAACAGCACTTTTCATCTaGTATCTGATCACCATTCTT +
Preference number: 4 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPTALFI*YLITIL
Trigger: AAGAATGGTGATCAGATATCAGATGAAAAGTGCTGT...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATTTCCATCGCTGCCTaGGGCTGTTCCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRISIAA*GCSFFH
Trigger: GTGGAAGAAGGAACAGCCTCAGGCAGCGATGGAAAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTATTTCCATCGCTGCCTaGGGCTGTTCCTTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLISIAA*GCSFFH
Trigger: GTGGAAGAAGGAACAGCCTCAGGCAGCGATGGAAAT...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTCCAGGTCATCACTTTaGGCAAACACACTGTCCATA +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFSRSSL*ANTLSI
Trigger: TATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACTTCAGTAAATCTTCATaGTCAAAAATGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHFSKSS*SKMGPK
Trigger: CTTGGGGCCCATTTTTGATCATGAAGATTTACTGAA...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTTCAAGATGCTCCAAATaGACACTTATACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGSRCSK*TLIQHF
Trigger: GAAATGCTGTATAAGTGTTCATTTGGAGCATCTTGA...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGTTGTGGAAAGCTCGTaGGTGCATTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCVVESS*VHSGEA
Trigger: AGCTTCACCAGAATGCACTCACGAGCTTTCCACAAC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGTCTCTACCACATCAGTaGGGTTCTCAGGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQSLPHQ*GSQVQK
Trigger: CTTTTGTACCTGAGAACCTCACTGATGTGGTAGAGA...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDISGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR TCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKECPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR TCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGCTGCTCGGTAAACTaGTCCAAAACTGCCATCACC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGCSVN*SKTAIT
Trigger: GGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCACCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTTATGTTTCACTGTGTaGCCCTCCAAGACCATCCAT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFLCFTV*PSKTIH
Trigger: ATGGATGGTCTTGGAGGGTCACACAGTGAAACATAA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAAGCATCACTTCCCTATaGGCTGGGAAACTGATATGC +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLSITSL*AGKLIC
Trigger: GCATATCAGTTTCCCAGCTCATAGGGAAGTGATGCT...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTGGTACATAAGGAGATTCTCTGGGTACTGCTaGACAGCTTTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: WPSSSPIFSCKLFWYIRRFSGYC*TAFTTN
Trigger: GTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAA...TCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGCATTCTCTGGGTACTaGTGCACAGCTTTCACCACA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCAFSGY*CTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTTGGGGACCACTGCTaGCATTATATCCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSFGDHC*HYIQGS
Trigger: ACTTCCCTGGATATAATGGCAGCAGTGGTCCCCAAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTATTTGGGGACCACTGCTaGCATTATATCCAGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLFGDHC*HYIQGS
Trigger: ACTTCCCTGGATATAATGGCAGCAGTGGTCCCCAAA...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAATATTTTGGGGACCACTaGTGCCATTATATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQYFGDH*CHYIQG
Trigger: TCCCTGGATATAATGGCAGCAGTGGTCCCCAAAATA...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp ATATATTCTCTCTCAGAAGCCAGAGAAGAAATGCTGTCTGAATGCCTCATATGGATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: IYSLSEAREEMLSECLIWMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...CCATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTTCTGAGAGAGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: LQILPDNKLQETNLSKCLGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCATGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVESSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCAGCTGCAGTAATCTaGTTCTCTTGTGGGACTGAG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSAAVI*FSCGTE
Trigger: CTCAGTCCCACAAGAGAAGCAGATTACTGCAGCTGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAGAGACCTACTGCTCTaGTTGTGTGGACATGTATCT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPRDLLL*LCGHVS
Trigger: AGATACATGTCCACACAAGCAGAGCAGTAGGTCTCT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGCCTTGAAATAACTTaGAGGCGCGCTCGGAGTACG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRCLEIT*RRARST
Trigger: CGTACTCCGAGCGCGCCTCCAAGTTATTTCAAGGCA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGCCTTGAAATAACTTaGAGGCGCGCTCGGAGTACG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCLEIT*RRARST
Trigger: CGTACTCCGAGCGCGCCTCCAAGTTATTTCAAGGCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAATGCTGCATTCTCTaGGTACTGCTGCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQCCIL*VLLHSF
Trigger: AAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAACCTCCTTTGCTTGATTaGCATCTGCTCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEPPLLD*HLLPIE
Trigger: TTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGG...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp ATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACGAGAAAACTGTTTCAGAGTTaGACATTTCACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: MQALRCFSSETSKCVPTRKLFQS*TFHCRI
Trigger: GATCCTACAGTGAAATGTCCAACTCTGAAACAGTTT...TCTCGTTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCGGTACAAAAGACAGCTaGTTATATGACAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIGTKDS*LYDRLN
Trigger: GTTTAACCTGTCATATAACCAGCTGTCTTTTGTACC...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATCATCTATGCCAACTGTaGCACTTTGCATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNHLCQL*HFAFQD
Trigger: ATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATG...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATCAAACTGGGGTGGTaGAGGTGGCAAAGCACCACA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFIKLGW*RWQSTT
Trigger: TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGATATCAAACTGGGGTaGTGGAGGTGGCAAAGCACC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFDIKLG*WRWQST
Trigger: GGTGCTTTGCCACCTCCACCACCCCAGTTTGATATC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATAATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFQTAER*DLQCCI
Trigger: AATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATGATGCTGTTATTCTaGTCACACGCTCTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYMMLLF*SHALSS
Trigger: GCTAGAGAGAGCGTGTGATCAGAATAACAGCATCAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCCAGGTCATCACTTTaGGCAAACACACTGTCCATA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSRSSL*ANTLSI
Trigger: TATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCGTCAACGCTTTTCGTACATCTTGTTCACGAGATCCACTATTCAGTAAGAGTTTGCCTCATATGGGATTaGAGTTTTGATGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: SSTLFVHLVHEIHYSVRVCLIWD*SFDDLS
Trigger: ACTCAGGTCATCAAAACTTCAATCCCATATGAGGCA...AACTCTTACTGAATAGTGGATCTCGTGAACAAGATGTACGAAAAGCGTTGACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGTGAGTGCATTCTGGTaGAGCTCCAGCTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVVSAFW*SSSFSR
Trigger: TCTTGAAAAGCTGGAGCTTCACCAGAATGCACTCAC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCGTTGTGGAAAGCTCGTaGGTGCATTCTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFVVESS*VHSGEA
Trigger: AGCTTCACCAGAATGCACTCACGAGCTTTCCACAAC...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQRQLVI*QVKLFQ
Trigger: CTGAAACAGTTTAACCTGTCATATAACCAGCTGTCT...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCTCTACCACATCAGTaGGGTTCTCAGGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSLPHQ*GSQVQK
Trigger: CTTTTGTACCTGAGAACCTCACTGATGTGGTAGAGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTATTTCCTTCTAAAATaGGCTGCTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HNRAILLSNIESSVYHHCYFLLK*AAPVSL
Trigger: TAGAGAAACTGGAGCAGCTCATTTTAGAAGGAAATA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCGCGAGCCTTTATATTaGAGAGCCAAGGCTTCATGG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFREPLY*RAKASW
Trigger: CCATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFIKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCCTGGTGTGCCCTCTaGTGTTTTTATCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPWCAL*CFYPHS
Trigger: AGAATGGGGATAAAAACATCAGAGGGCACACCAGGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR TCA 90 bp TACTCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAATACCACAGAGCATCCTaGAACAAGAAAATTCATTCT +
Preference number: 4 (lower is better)
Translates to: YSCRLCVASHQKHPNVCQYHRAS*NKKIHS
Trigger: AGAATGAATTTTCTTGTTTCAGGATGCTCTGTGGTA...TTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTACAGAAATGCTTTCCTaGCTCCACAGTCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVTEMLS*LHSLNQ
Trigger: CTGATTCAGACTGTGGAGTCAGGAAAGCATTTCTGT...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAATTGTGAGATTCAGCTaGGATGACACACTGACCATA +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQIVRFS*DDTLTI
Trigger: TATGGTCAGTGTGTCATCTCAGCTGAATCTCACAAT...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTACTGAGACAACCTATTaGGAGACCTACTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSTETTY*ETYCSA
Trigger: AGCAGAGCAGTAGGTCTCTCAATAGGTTGTCTCAGT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGAGACAAACTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQRQTVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGTTTGTCT...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGPIKL*IVPGQT
Trigger: AGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GGAGATCTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAAGGACTTCCACATTATTaGAAGGAATCGCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: GDLRSSVQSLTSLHWHYEGLPHY*KESLGN
Trigger: ATTCCCTAGCGATTCCTTGCAATAATGTGGAAGTCC...TTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAGATCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAGGACTTCCACATTATTaGAAGGAATCGCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQGLPHY*KESLGN
Trigger: ATTCCCTAGCGATTCCTTGCAATAATGTGGAAGTCC...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTTTCTCTGGGTACTGCTaGACAGCTTTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFFSGYC*TAFTTN
Trigger: GTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAA...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGAAACCAGAATTTTTaGCAGCAGATGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGNQNF*QQMSSS
Trigger: GGAACTGGACATCTGCTGGCAAAAATTCTGGTTTCC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGAAGATCCCTCCTTTaGTTGATTGGCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRRSLL*LIGICS
Trigger: GGAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATTGTCACCTTTCCCAATaGTTATCGTCAACGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNCHLSQ*LSSTLF
Trigger: GAAAAGCGTTGACGATAAGCATTGGGAAAGGTGACA...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGGAAAGCTCGTGAGTaGATTCTGGTGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRWKARE*ILVKLQ
Trigger: CTGGAGCTTCACCAGAATGCACTCACGAGCTTTCCA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTTGGAAAGCTCGTGAGTaGATTCTGGTGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLWKARE*ILVKLQ
Trigger: CTGGAGCTTCACCAGAATGCACTCACGAGCTTTCCA...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGGAAAGCTCGTGAGTaGATTCTGGTGAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFWKARE*ILVKLQ
Trigger: CTGGAGCTTCACCAGAATGCACTCACGAGCTTTCCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSDSKVQ*SLRHKM
Trigger: CATTTTATGACGCAGCGAGCATTGTACCTTGCTGTC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGGAGTGCAATCCTGTaGTGTAGGGTTCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFWSAIL*CRVLVR
Trigger: CCTCACTAGAACCCTACAGCACAGGATTGCACTCCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCCCAGCCAAATGCTTaGATTCCTGCTGTTGTGATG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFAQPNA*IPAVVM
Trigger: CATCACAACAGCAGGAATGCAAGCATTTGGCTGGGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTCACAGCCCAGCCAAATaGTTGCATTCCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTHSPAK*LHSCCC
Trigger: ACAACAGCAGGAATGCAAGCATTTGGCTGGGCTGTG...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR GCA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCAGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAAGGTCCTTTTGGATaGTCCTCTTTCCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQGPFG*SSFQTQ
Trigger: TTGGGTCTGGAAAGAGGAGCATCCAAAAGGACCTTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR GCA 90 bp AGTTTACAGTCATTAAGAGCATCTAATTGTAACTCCTGTGCAACTCTAAAGTCTGGAGGATCACTTGAGTaGAGAAGGTCAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLQSLRASNCNSCATLKSGGSLE*RRSRLQ
Trigger: TTGCAGCCTTGACCTTCTGCACTCAAGTGATCCTCC...AGACTTTAGAGTTGCACAGGAGTTACAATTAGATGCTCTTAATGACTGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTGGTCAGACAAACTGTaGCATGATTTTACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFWSDKL*HDFTKP
Trigger: TGGCTTTGTAAAATCATGGCACAGTTTGTCTGACCA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCATTTCCAACATCCTaGGGTCCCATTAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSFPTS*GPIKLC
Trigger: GCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp CTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAACTGTTATCATTTCCAACATCCTaGGGTCCCATTAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LRSSVQSLTSLHWHYELLSFPTS*GPIKLC
Trigger: GCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGA...TAACAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp GATCTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAACTGCCTAATGTAAGCCTATaGAGCAAACAGCAACTCACT +
Preference number: 4 (lower is better)
Translates to: DLRSSVQSLTSLHWHYELPNVSL*SKQQLT
Trigger: AGTGAGTTGCTGTTTGCTCCATAGGCTTACATTAGG...CAGTTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAATGCTGCATTCTCTaGGTACTGCTGCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQCCIL*VLLHSF
Trigger: AAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCACTTCCCTATGAGCTaGGAAATGGCCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCHFPMS*EMAIFI
Trigger: GATGAAGATGGCCATTTCCCAGCTCATAGGGAAGTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCTCCCTGGATTCTTCTaGCATGCCAGGCACTATAAA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLPGFF*HARHYK
Trigger: TTTATAGTGCCTGGCATGCCAGAAGAATCCAGGGAG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTGGGCCCCAAGGAATTaGAATGTCTTTGCAAATTTG +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPWAPRN*NVFANL
Trigger: CAAATTTGCAAAGACATTCCAATTCCTTGGGGCCCA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp TACTCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: YSCRLCVASHQKHPNVCQLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...TTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGAGCCAAGGCTTCATaGCATCAACTTCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRRAKAS*HQLQPV
Trigger: GACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR CCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFISITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATCACTTTGAGCAAACACACTGTCCATAGAAGAGTCAGGAATAAAGGTCCATTCATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: ITLSKHTVHRRVRNKGPFMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...GAATGGACCTTTATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGATCCAAGGAACCCTTaGAGGCTAACTCCATCACCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFDPRNP*RLTPSP
Trigger: TGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: FILKSQGFMASTSACPLLFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAATTCTGTATCCTCCCTaGATTCTTCTGGCATGCCAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSILYPP*ILLACH
Trigger: ATGGCATGCCAGAAGAATCCAGGGAGGATACAGAAT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680790.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATTGTGCTGGAAAAGCTaGATATCAGTATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVELCWKS*ISVCRR
Trigger: CCTTCTGCATACTGATATCCAGCTTTTCCAGCACAA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp TGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTGGTACATAAGGAGACTTCAGTCCAATCACTaGCAAGTTTACACTGGCATT +
Preference number: 4 (lower is better)
Translates to: WPSSSPIFSCKLFWYIRRLQSNH*QVYTGI
Trigger: AATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAG...TCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp ATCACTTTGAGCAAACACACTGTCCATAGAAGAGTCAGGAATAAAGGTCCATTCATCATTGGCTGGAAATaGGTGCATGGCATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: ITLSKHTVHRRVRNKGPFIIGWK*VHGIKN
Trigger: ATTTTTGATGCCATGCACTCATTTCCAGCCAATGAT...GAATGGACCTTTATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AAGGAATCGCTAGGGAATGTAAACAATGCAGCACATGAAGCACAATTTCCTCTTAAACAATGCAGCACATaGAGCACAATTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KESLGNVNNAAHEAQFPLKQCST*STISSS
Trigger: TGAAGAGGAAATTGTGCTTCATGTGCTGCATTGTTT...AAGAGGAAATTGTGCTTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTACATCTGCAGTGTGTaGAGCACTGAATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCYICSV*STESIA
Trigger: TGCTATGGATTCAGTGCTTCACACACTGCAGATGTA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATATACATCTGCAGTGTGTaGAGCACTGAATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIYICSV*STESIA
Trigger: TGCTATGGATTCAGTGCTTCACACACTGCAGATGTA...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCCAGGTCATCACTTTaGGCAAACACACTGTCCATA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSRSSL*ANTLSI
Trigger: TATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGAAGAAATGCTGTCTaGATGCCTCATATGGGATTG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSRRNAV*MPHMGL
Trigger: CAATCCCATATGAGGCATTCAGACAGCATTTCTTCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTGAGTGCATTCTGGTaGAGCTCCAGCTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVSAFW*SSSFSR
Trigger: TCTTGAAAAGCTGGAGCTTCACCAGAATGCACTCAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAGTCAGGGGCAATCTaGGATATTGGAATGGTGAGC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKSGAI*DIGMVS
Trigger: GCTCACCATTCCAATATCTCAGATTGCCCCTGACTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGCATTCCTGCTGTTGTaGTGTGTAGCAACCATGCAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRAFLLL*CVATMH
Trigger: ATGCATGGTTGCTACACATCACAACAGCAGGAATGC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTTCATGTGGAAGATTaGTGTCCCAAACGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLHVED*CPKRSS
Trigger: GCTTGACCGTTTGGGACATCAATCTTCCACATGAAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACACAAATTCAGTCAGTTaGTCCTCTGAGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYTNSVS*SSETLS
Trigger: TGAGAGAGTCTCAGAGGAGCAACTGACTGAATTTGT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTGGTACATAAGGAGAACAAATTCAGTCAGTTaGTCCTCTGAGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WPSSSPIFSCKLFWYIRRTNSVS*SSETLS
Trigger: TGAGAGAGTCTCAGAGGAGCAACTGACTGAATTTGT...TCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTCTCTGGGTACTGCTaGACAGCTTTCACCACAAAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFSGYC*TAFTTN
Trigger: GTTTGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCCTTTGATGAAGAATaGATCAGCATGGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSFDEE*ISMESI
Trigger: GATGCTCTCCATGCTGATGCATTCTTCATCAAAGGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTGGAAACCAGAATTTTTaGCAGCAGATGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSGNQNF*QQMSSS
Trigger: GGAACTGGACATCTGCTGGCAAAAATTCTGGTTTCC...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGGAAACCAGAATTTTTaGCAGCAGATGTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCGNQNF*QQMSSS
Trigger: GGAACTGGACATCTGCTGGCAAAAATTCTGGTTTCC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGAAGATCCCTCCTTTaGTTGATTGGCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRRRSLL*LIGICS
Trigger: GGAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATCCTCCAAGGCAAATaGTATTGTTGGCCACATCCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCILQGK*YCWPHP
Trigger: TGGATGTGGCCAACAATAGCATTTGCCTTGGAGGAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAGACAGCAAGGTACAATaGTCGCTGCGTCATAAAATG +
Preference number: 4 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIDSKVQ*SLRHKM
Trigger: CATTTTATGACGCAGCGAGCATTGTACCTTGCTGTC...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LQILPDNKLQETNLSKCLGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGGACGAATCCCAGCTaGCAGCAAAGATATCAAACT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGTNPS*QQRYQT
Trigger: AGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTCACGAAACCCTGGTGTaGCCTCTGATGTTTTTATCC +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVHETLV*PLMFLS
Trigger: GGATAAAAACATCAGAGGGCACACCAGGGTTTCGTG...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACACCTTCAATAAATTGTaGTGGAAAAGCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: HFHNRAILLSNIESSVYHTFNKL*WKSWIS
Trigger: TGATATCCAGCTTTTCCAGCACAATTTATTGAAGGT...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp TGTTCTTTCTATGCCACGTTAATGCTTTGTAACAGGCTTCCAGCCAAAACAATTATCTGTTTTCCTTCCTaGACATTGTTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: CSFYATLMLCNRLPAKTIICFPS*TLFSLT
Trigger: AGTCAGGCTGAACAATGTCCAGGAAGGAAAACAGAT...AATTGTTTTGGCTGGAAGCCTGTTACAAAGCATTAACGTGGCATAGAAAGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGATCCTCCAGGATTTaGACCAGCGTTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRSSRI*TSVSIC
Trigger: ACAGATAGAAACGCTGGTCCAAATCCTGGAGGATCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACCTAATGTAAGCCTATaGAGCAAACAGCAACTCACT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSPNVSL*SKQQLT
Trigger: AGTGAGTTGCTGTTTGCTCCATAGGCTTACATTAGG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCACTTCCCTATGAGCTaGGAAATGGCCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHFPMS*EMAIFI
Trigger: GATGAAGATGGCCATTTCCCAGCTCATAGGGAAGTG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATTCTGTATCCTCCCTaGATTCTTCTGGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFILYPP*ILLACQ
Trigger: CTGGCATGCCAGAAGAATCCAGGGAGGATACAGAAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCCTCCTTTGCTTGATTaGCATCTGCTCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCPPLLD*HLLPIE
Trigger: TTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATATTTCCCCATTTCATTaGGAAAGGATCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNISPFH*ERILVP
Trigger: TGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGTGGTAATCTCGTATaGCAGGGAACCCTCGCTTAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSGNLV*QGTLAY
Trigger: ATAAGCGAGGGTTCCCTGCCATACGAGATTACCACT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LQILPDNKLQETNLSKCLHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCCCTTAGGGTGTTTTaGACAACCTTCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFALRVF*TTFHFH
Trigger: GTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCTATCACAGGCCTGTaGTCAGACAAACTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSITGL*SDKLLG
Trigger: TCCAAGCAGTTTGTCTGACCACAGGCCTGTGATAGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCACCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GAAGAGGACACAAACAAATGGAAAGATATTCATGCTCACAGACTGGAAGAATTAGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: EEDTNKWKDIHAHRLEELGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...TAATTCTTCCAGTCTGTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCAAAGATATCAAACTaGGGTGGTGGAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFAKISN*GGGGGK
Trigger: TTTGCCACCTCCACCACCCCAGTTTGATATCTTTGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAACCATCAGCTACGTaGAGTGCAATCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKPSAT*SAILCC
Trigger: ACAGCACAGGATTGCACTCCACGTAGCTGATGGTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp ATCACTTTGAGCAAACACACTGTCCATAGAAGAGTCAGGAATAAAGGTCCATTCATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: ITLSKHTVHRRVRNKGPFIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...GAATGGACCTTTATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCATCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGACATTGTTCAGCCTaGCTATCAACTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGHCSA*LSTSSE
Trigger: CTCTGAAGAAGTTGATAGTCAGGCTGAACAATGTCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGACATTGTTCAGCCTaGCTATCAACTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGHCSA*LSTSSE
Trigger: CTCTGAAGAAGTTGATAGTCAGGCTGAACAATGTCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCTTCAGTCCAATCACTaGCAAGTTTACACTGGCATT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLQSNH*QVYTGI
Trigger: AATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCCTTCAGTCCAATCACTaGCAAGTTTACACTGGCATT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVLQSNH*QVYTGI
Trigger: AATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAG...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCCAATATCAGCAAGGTaGTTTTACCTGAAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYPISAR*FYLKLG
Trigger: TCCTAACTTCAGGTAAAATCACCTTGCTGATATTGG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAAACAATGCAGCACATaGAGCACAATTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSKQCST*STISSS
Trigger: TGAAGAGGAAATTGTGCTTCATGTGCTGCATTGTTT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAAACAATGCAGCACATaGAGCACAATTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYKQCST*STISSS
Trigger: TGAAGAGGAAATTGTGCTTCATGTGCTGCATTGTTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTACATCTGCAGTGTGTaGAGCACTGAATCCATAGCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRYICSV*STESIA
Trigger: TGCTATGGATTCAGTGCTTCACACACTGCAGATGTA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATAAGATGCTGACAATTTaGGGATTGCTAAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNKMLTI*GLLRLS
Trigger: AGACAATCTTAGCAATCCTCAAATTGTCAGCATCTT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACTAAGTCAAATGAATaGTGCACCAGCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTKSNE*CTSSLE
Trigger: TTCTAAGCTGCTGGTGCATCATTCATTTGACTTAGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACACTAAGTCAAATGAATaGTGCACCAGCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYTKSNE*CTSSLE
Trigger: TTCTAAGCTGCTGGTGCATCATTCATTTGACTTAGT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAATCTTTCTCACATACCTaGCAAATTAAAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQSFSHT*QIKEDP
Trigger: GGGATCTTCTTTAATTTGTCAGGTATGTGAGAAAGA...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATCAAGATGCTCCAAATaGACACTTATACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVESRCSK*TLIQHF
Trigger: GAAATGCTGTATAAGTGTTCATTTGGAGCATCTTGA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYRQLVI*QVKLFQ
Trigger: CTGAAACAGTTTAACCTGTCATATAACCAGCTGTCT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCTCTACCACATCAGTaGGGTTCTCAGGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSLPHQ*GSQVQK
Trigger: CTTTTGTACCTGAGAACCTCACTGATGTGGTAGAGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGACCTGGTAGGTACTaGATATCATTGCTGCTCATA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGPGRY*ISLLLI
Trigger: TATGAGCAGCAATGATATTCAGTACCTACCAGGTCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCAGGAGTTCCTTGGTaGTTTTACTCATGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSGVPW*FYSCRL
Trigger: AAGCCTGCATGAGTAAAATCACCAAGGAACTCCTGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR TCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFIMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGAGATATTGGAATGGTaGGCCTTGGTTGATCTGGAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFEILEW*ALVDLD
Trigger: ATCCAGATCAACCAAGGCTCACCATTCCAATATCTC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCAGCAATCTTTGCAATaGTGGCAGCATTGGGATACA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFQQSLQ*WQHWDT
Trigger: TGTATCCCAATGCTGCCATCATTGCAAAGATTGCTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAAATCTACAGATTCAATaGAATTCCCATGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVENLQIQ*NSHESS
Trigger: GGAGCTTTCATGGGAATTTCATTGAATCTGTAGATT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACT +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTGPIKL*IVPGQT
Trigger: AGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGPIKL*IVPGQT
Trigger: AGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCTCCTTTGATGAAGAATaGATCAGCATGGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVSFDEE*ISMESI
Trigger: GATGCTCTCCATGCTGATGCATTCTTCATCAAAGGA...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTATTTTGGGGACCACTaGTGCCATTATATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRYFGDH*CHYIQG
Trigger: TCCCTGGATATAATGGCAGCAGTGGTCCCCAAAATA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATCCTCCAAGGCAAATaGTATTGTTGGCCACATCCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRILQGK*YCWPHP
Trigger: TGGATGTGGCCAACAATAGCATTTGCCTTGGAGGAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAAAATTTCCATCGCTaGCTGAGGCTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKNFHR*LRLFLL
Trigger: AAGAAGGAACAGCCTCAGGCAGCGATGGAAATTTTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAAGCCAGAGAAGAAATaGTGTCTGAATGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYKPEKK*CLNASY
Trigger: ATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAACATCCAAATGTGTaGCAACGAGAATCACAGGGG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKHPNV*QRESQG
Trigger: CCCCTGTGATTCTCGTTGGCACACATTTGGATGTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATGCAGGCTTTGCGTTaGTTCTCATCAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFMQALR*FSSETS
Trigger: GGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp AGTTTACAGTCATTAAGAGCATCTAATTGTAACTCCTGTGCAACTCTAAAGTCTGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: SLQSLRASNCNSCATLKSVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...AGACTTTAGAGTTGCACAGGAGTTACAATTAGATGCTCTTAATGACTGTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGTAGTCAGCAATCTTTaGAATGATGGCAGCATTGGG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFVVSNL*NDGSIG
Trigger: CCCAATGCTGCCATCATTGCAAAGATTGCTGACTAC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGCAGTACTGAGCAATaGCGTAGTCAGCAATCTTTG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSSTEQ*RSQQSL
Trigger: CAAAGATTGCTGACTACGGCATTGCTCAGTACTGCT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGCATCATTCACATCATTaGCCTGTTTGGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VYHHCYDVGITESCIRKQHHSHH*PVWKTV
Trigger: TACTGTTTTCCAAACAGGGCAATGATGTGAATGATG...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGGATTCTTCTGGCATaGCATTTTGTTCTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSWILLA*HFVLRE
Trigger: CTCTCTTAGAACAAAATGGCATGCCAGAAGAATCCA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAGCTGGGAAACTGATATaGACAAAACTCCTTGCTACA +
Preference number: 4 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIAGKLI*TKLLAT
Trigger: TGTAGCAAGGAGTTTTGTGCATATCAGTTTCCCAGC...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATCTGTTTTCCTTCCTaGACATTGTTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCICFPS*TLFSLT
Trigger: AGTCAGGCTGAACAATGTCCAGGAAGGAAAACAGAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCATTTCCAACATCCTaGGGTCCCATTAAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSFPTS*GPIKLC
Trigger: GCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAGAATGCATCAGCATaGAGAGCATCACTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKNASA*RASLPY
Trigger: ATAGGGAAGTGATGCTCTCCATGCTGATGCATTCTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCCTCCTTTGCTTGATTaGCATCTGCTCCCAATAGAA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRPPLLD*HLLPIE
Trigger: TTCTATTGGGAGCAGATGCCAATCAAGCAAAGGAGG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTTCATGATCAAAAATaGGCCCCAAGGAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLHDQK*APRNWN
Trigger: ATTCCAATTCCTTGGGGCCCATTTTTGATCATGAAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GAAGAGGACACAAACAAATGGAAAGATATTCATGCTCACAGACTGGAAGAATTACATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: EEDTNKWKDIHAHRLEELHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...TAATTCTTCCAGTCTGTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCAATACATTCTGTTTaGGCGAAGTGCTCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPIHSV*AKCSFS
Trigger: AGAGAACGAGCACTTCGCCCAAACAGAATGTATTGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATGTGGTCCACAACTTaGCCCAAAAGAATACAGCCT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFMWSTT*PKRIQP
Trigger: AGGCTGTATTCTTTTGGGCCAAGTTGTGGACCACAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGCAATCTGAGATATTaGAATGGTGAGCCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGNLRY*NGEPWL
Trigger: CAACCAAGGCTCACCATTCCAATATCTCAGATTGCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTCAACCATAGGCCATaGGGCACAACCATATTCTTT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLNHRP*GTTIFF
Trigger: AAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCCAGGAGTAAAATATaGCCTCCTCCAGTTCCTATC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSRSKI*PPPVPI
Trigger: GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTACTGCTCTGCTTGTGTaGACATGTATCTTAATAGTT +
Preference number: 4 (lower is better)
Translates to: ITRISRRVERSRSKIWPPTALLV*TCILIV
Trigger: AACTATTAAGATACATGTCCACACAAGCAGAGCAGT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAGATGGACACTTAGATaGATGGATATACTGATACTA +
Preference number: 4 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFRWTLR*MDILIL
Trigger: TAGTATCAGTATATCCATCCATCTAAGTGTCCATCT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATACACTTCCCTATGAGCTaGGAAACTGATATGCACAAA +
Preference number: 4 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIHFPMS*ETDMHK
Trigger: TTTGTGCATATCAGTTTCCCAGCTCATAGGGAAGTG...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
3UTR CAA 72 bp AAATCCCACACATTTAGGACGAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGCCAGTCTTTCACATCT +
Preference number: 4 (lower is better)
Translates to: KSHTFRTRSLFL*SLIWIGQSFTS
Trigger: AGATGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCTCGTCCTAAATGTGTGGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
3UTR CAA 72 bp TGTAAAGCTTTGCATCCAAGTTTCTGGACTTCATCATaGGCTGGAAATGAGTGCATGGCATCAAAAATTAAC +
Preference number: 4 (lower is better)
Translates to: CKALHPSFWTSS*AGNECMASKIN
Trigger: GTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTAAGAATCAATTGGTaGACACCAAGGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLRINW*TPRTSQ
Trigger: TTGGGAAGTCCTTGGTGTTCACCAATTGATTCTTAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATCATTGGCTGGAAATaGGTGCATGGCATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCIIGWK*VHGIKN
Trigger: ATTTTTGATGCCATGCACTCATTTCCAGCCAATGAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAAAAACAATGCAGCACATaGAGCACAATTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EESGIKVHSSNLDSTSSEKQCST*STISSS
Trigger: TGAAGAGGAAATTGTGCTTCATGTGCTGCATTGTTT...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGGTAATGATGTCTCATaGCGTTTCATAACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYGNDVS*RFITVS
Trigger: ACTAACAGTTATGAAACGTCATGAGACATCATTACC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR TCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTGGTAATGATGTCTCATaGCGTTTCATAACTGTTAGT +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVGNDVS*RFITVS
Trigger: ACTAACAGTTATGAAACGTCATGAGACATCATTACC...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTACTAAGTCAAATGAATaGTGCACCAGCAGCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFTKSNE*CTSSLE
Trigger: TTCTAAGCTGCTGGTGCATCATTCATTTGACTTAGT...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTATTTTCATCTGATATCTaGTCACCATTCTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLFSSDI*SPFLLV
Trigger: CACTAGCAAGAATGGTGATCAGATATCAGATGAAAA...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACAGCACTTTTCATCTaGTATCTGATCACCATTCTT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTALFI*YLITIL
Trigger: AAGAATGGTGATCAGATATCAGATGAAAAGTGCTGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTCAGTAAATCTTCATaGTCAAAAATGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFSKSS*SKMGPK
Trigger: CTTGGGGCCCATTTTTGATCATGAAGATTTACTGAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGCCTCATATGGGATTaGAGTTTTGATGACCTGAGT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRCLIWD*SFDDLS
Trigger: ACTCAGGTCATCAAAACTTCAATCCCATATGAGGCA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGACAGCTGGTTATATaGCAGGTTAAACTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRQLVI*QVKLFQ
Trigger: CTGAAACAGTTTAACCTGTCATATAACCAGCTGTCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTTCCAAGTTGTAACTaGCATCCAGAGATGTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVPSCN*HPEMSD
Trigger: ATCTGACATCTCTGGATGTCAGTTACAACTTGGAAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679532.1
CDS-3UTR TCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR TCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGAAACCATTCTTCCATaGGAGAATCAATGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFETILP*ENQCGP
Trigger: TGGACCACATTGATTCTCTCATGGAAGAATGGTTTC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATGGTGAGCCTTGGTTaGTCTGGATTTACTAAGAGA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFMVSLG*SGFTKR
Trigger: TCTCTTAGTAAATCCAGATCAACCAAGGCTCACCAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR TCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGTATATAATCATGGCTaGGTGGAGGTATCTCAAACC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFVYNHG*VEVSQT
Trigger: GGTTTGAGATACCTCCACTCAGCCATGATTATATAC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGGTTTCTATCTGAATaGTGTAGGATCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFRFLSE*CRICSI
Trigger: GATGCTGCAGATCCTACATCATTCAGATAGAAACCT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGAATGGCACTCCTATTaGAAGAGTTATCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTEWHSY*KSYPEM
Trigger: CATCTCTGGATAACTCTTTCAATAGGAGTGCCATTC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACAAATTCAGTCAGTTaGTCCTCTGAGACTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTNSVS*SSETLS
Trigger: TGAGAGAGTCTCAGAGGAGCAACTGACTGAATTTGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGACTTCCACATTATTaGAAGGAATCGCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGLPHY*KESLGN
Trigger: ATTCCCTAGCGATTCCTTGCAATAATGTGGAAGTCC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGACTTCCACATTATTaGAAGGAATCGCTAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGLPHY*KESLGN
Trigger: ATTCCCTAGCGATTCCTTGCAATAATGTGGAAGTCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCCTTTGATGAAGAATaGATCAGCATGGAGAGCATC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSFDEE*ISMESI
Trigger: GATGCTCTCCATGCTGATGCATTCTTCATCAAAGGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGTCACCTTTCCCAATaGTTATCGTCAACGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRCHLSQ*LSSTLF
Trigger: GAAAAGCGTTGACGATAAGCATTGGGAAAGGTGACA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGTCACCTTTCCCAATaGTTATCGTCAACGCTTTTC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCHLSQ*LSSTLF
Trigger: GAAAAGCGTTGACGATAAGCATTGGGAAAGGTGACA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAAAATTTCCATCGCTaGCTGAGGCTGTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKNFHR*LRLFLL
Trigger: AAGAAGGAACAGCCTCAGGCAGCGATGGAAATTTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCTTCTAAAATGAGCTaGTCCAGTTTCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPSKMS*SSFSTT
Trigger: TGTGGTAGAGAAACTGGAGCAGCTCATTTTAGAAGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCCTTCTAAAATGAGCTaGTCCAGTTTCTCTACCACA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRPSKMS*SSFSTT
Trigger: TGTGGTAGAGAAACTGGAGCAGCTCATTTTAGAAGG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGTCTTTCACATCTATaGCAACTGTGGCACTTTGCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSLSHL*QLWHFA
Trigger: TGCAAAGTGCCACAGTTGGCATAGATGTGAAAGACT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp AGTTTACAGTCATTAAGAGCATCTAATTGTAACTCCTGTGCAACTCTAAAGTCTGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: SLQSLRASNCNSCATLKSGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...AGACTTTAGAGTTGCACAGGAGTTACAATTAGATGCTCTTAATGACTGTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGFPKF*QSIRFL
Trigger: GAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCATTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCAAAAATTGCTAACTTaGCATCAGCGGTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFQKLLT*HQRFQP
Trigger: TGGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACCTCCCTTAAAAAGTaGACGCAGTCTATTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTSLKK*TQSISP
Trigger: TGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGCTGGATATCAGTATaGAGAAGGATGAAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSWISV*RRMKVG
Trigger: GCCTACTTTCATCCTTCTGCATACTGATATCCAGCT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAATGGAAAGATATTCATaGTCACAGACTGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEMERYS*SQTGRI
Trigger: AATTCTTCCAGTCTGTGAGCATGAATATCTTTCCAT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATCTGTTTTCCTTCCTaGACATTGTTCAGCCTGACT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFICFPS*TLFSLT
Trigger: AGTCAGGCTGAACAATGTCCAGGAAGGAAAACAGAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCTAATGTAAGCCTATaGAGCAAACAGCAACTCACT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPNVSL*SKQQLT
Trigger: AGTGAGTTGCTGTTTGCTCCATAGGCTTACATTAGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAGAATGCATCAGCATaGAGAGCATCACTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKNASA*RASLPY
Trigger: ATAGGGAAGTGATGCTCTCCATGCTGATGCATTCTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAATTTCTTGGTCATCTaGATACATCTGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCNFLVI*IHLQCV
Trigger: CACACACTGCAGATGTATCCAGATGACCAAGAAATT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGGGCCCCAAGGAATTaGAATGTCTTTGCAAATTTG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFWAPRN*NVFANL
Trigger: CAAATTTGCAAAGACATTCCAATTCCTTGGGGCCCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTCTTATACAGCATTTCTaGCTTAGGGCATCAATATCT +
Preference number: 4 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVLIQHF*LRASIS
Trigger: AGATATTGATGCCCTAAGCCAGAAATGCTGTATAAG...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCTTATACAGCATTTCTaGCTTAGGGCATCAATATCT +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLIQHF*LRASIS
Trigger: AGATATTGATGCCCTAAGCCAGAAATGCTGTATAAG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATTTCCCCATTTCATTaGGAAAGGATCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYISPFH*ERILVP
Trigger: TGGAACTAAGATCCTTTCCCAATGAAATGGGGAAAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCAATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCATCTATGCCAACTGTaGCACTTTGCATTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHLCQL*HFAFQD
Trigger: ATCTTGGAATGCAAAGTGCCACAGTTGGCATAGATG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCCATCAGATTCCTCGGTaGCATTCACAAAGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFHQIPR*HSQSGN
Trigger: ATTACCACTTTGTGAATGCCACCGAGGAATCTGATG...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTCTACATAGCAGTCTaGAATCAGCTGTCCAACAAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFYIAV*NQLSNN
Trigger: GTTGTTGGACAGCTGATTCCAGACTGCTATGTAGAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFIVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATGAGAGAATCAATGTaGTCCACAACTTGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFMRESM*STTWPK
Trigger: TTTGGGCCAAGTTGTGGACCACATTGATTCTCTCAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: KEKIFVPHPPHITFLSVENLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTAAGAATCAATTGGTaGACACCAAGGACTTCCCAA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLRINW*TPRTSQ
Trigger: TTGGGAAGTCCTTGGTGTTCACCAATTGATTCTTAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCAATATCAGCAAGGTaGTTTTACCTGAAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPISAR*FYLKLG
Trigger: TCCTAACTTCAGGTAAAATCACCTTGCTGATATTGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATCATTGGCTGGAAATaGGTGCATGGCATCAAAAAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFIIGWK*VHGIKN
Trigger: ATTTTTGATGCCATGCACTCATTTCCAGCCAATGAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAGATGCTGACAATTTaGGGATTGCTAAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKMLTI*GLLRLS
Trigger: AGACAATCTTAGCAATCCTCAAATTGTCAGCATCTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCTTTCTCACATACCTaGCAAATTAAAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSFSHT*QIKEDP
Trigger: GGGATCTTCTTTAATTTGTCAGGTATGTGAGAAAGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTTTCATCTGATATCTaGTCACCATTCTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFSSDI*SPFLLV
Trigger: CACTAGCAAGAATGGTGATCAGATATCAGATGAAAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCTTTTTCACAAGAAATaGGCCTTCACTTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLFHKK*AFTSFT
Trigger: AGTGAAGGAAGTGAAGGCTCATTTCTTGTGAAAAAG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTCAGTAAATCTTCATaGTCAAAAATGGGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFSKSS*SKMGPK
Trigger: CTTGGGGCCCATTTTTGATCATGAAGATTTACTGAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCAAGATGCTCCAAATaGACACTTATACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSRCSK*TLIQHF
Trigger: GAAATGCTGTATAAGTGTTCATTTGGAGCATCTTGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCTATTTCCTTCTAAAATaGGCTGCTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFYFLLK*AAPVSL
Trigger: TAGAGAAACTGGAGCAGCTCATTTTAGAAGGAAATA...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGTCCAACAACAAGCTaGTCTCGGATCTTGAAATTA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCPTTS*SRILKL
Trigger: TAATTTCAAGATCCGAGATCAGCTTGTTGTTGGACA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCATCTAACTGCAGCTaGTTTTCTCTCACTAGTTGT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSSNCS*FSLTSC
Trigger: ACAACTAGTGAGAGAAAATCAGCTGCAGTTAGATGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCAAAATCTGTGCCATaGTTTTACAAAGCCACTTGG +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSKSVP*FYKATW
Trigger: CCAAGTGGCTTTGTAAAATCATGGCACAGATTTTGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR TCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGTTTCAATATGCTCTTaGGTTCCATGGTACAGGATT +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVVSICS*VPWYRI
Trigger: AATCCTGTACCATGGAACTCAAGAGCATATTGAAAC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679532.1
CDS-3UTR GCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCAGGAGAATGTATATaGTTCTGCATTAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSGECI*FCINSK
Trigger: TTTGGAGTTAATGCAGAAGCATATACATTCTCCTGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATATATCCAGGGAAGTGTTaGTTCCTTCAAAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIYPGKC*FLQKDD
Trigger: ATCATCTTTTTGAAGGAAGCAACACTTCCCTGGATA...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAGCCAGAGAAGAAATaGTGTCTGAATGCCTCATAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKPEKK*CLNASY
Trigger: ATATGAGGCATTCAGACAGCATTTCTTCTCTGGCTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR GCA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 4 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTACTGAATATCATTGCTaGTCATATCTAAAGACCGCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCTEYHC*SYLKTA
Trigger: TGCGGTCTTTAGATATGAGCAGCAATGATATTCAGT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: LQILPDNKLQETNLSKCLTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAACTGATCCAAAACTaGCATCACCTAGGAGAAACT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKLIQN*HHLGET
Trigger: AGTTTCTCCTAGGTGATGGCAGTTTTGGATCAGTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTTTCAACAGGAAGATaGACCAAGGCTAAGCACAAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFSTGR*TKAKHN
Trigger: ATTGTGCTTAGCCTTGGTGCATCTTCCTGTTGAAAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
CDS-3UTR GCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTTGGTCAGACAAACTGTaGCATGATTTTACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTWSDKL*HDFTKP
Trigger: TGGCTTTGTAAAATCATGGCACAGTTTGTCTGACCA...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAATTTCTTGGTCATCTaGATACATCTGCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRNFLVI*IHLQCV
Trigger: CACACACTGCAGATGTATCCAGATGACCAAGAAATT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTTCATGATCAAAAATaGGCCCCAAGGAATTGGAAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLHDQK*APRNWN
Trigger: ATTCCAATTCCTTGGGGCCCATTTTTGATCATGAAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTCTTATACAGCATTTCTaGCTTAGGGCATCAATATCT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSLIQHF*LRASIS
Trigger: AGATATTGATGCCCTAAGCCAGAAATGCTGTATAAG...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGGTACAAAAGACAGCTaGTTATATGACAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCGTKDS*LYDRLN
Trigger: GTTTAACCTGTCATATAACCAGCTGTCTTTTGTACC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCGGTACAAAAGACAGCTaGTTATATGACAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVGTKDS*LYDRLN
Trigger: GTTTAACCTGTCATATAACCAGCTGTCTTTTGTACC...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATTGCTGCAATAAGGTaGTTTTACCACTCCCAGTAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFIAAIR*FYHSQY
Trigger: ATACTGGGAGTGGTAAAACCACCTTATTGCAGCAAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTACGGGAAATTCAATTaGCACATTTTTACGCTCCGA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFYGKFN*HIFTLR
Trigger: TCGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGTCAGACAAACTGCTTaGAACCAGCAAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFVRQTA*NQQIFF
Trigger: GAAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGAC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATAATCATGGCTGAGTaGAGGTATCTCAAACCATCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFIIMAE*RYLKPS
Trigger: TGATGGTTTGAGATACCTCCACTCAGCCATGATTAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTATTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTTTGGAAGCCTAGGGTaGCAGATATTTTTATCCATC +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFFGSLG*QIFLSI
Trigger: GATGGATAAAAATATCTGCCACCCTAGGCTTCCAAA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCCTAACCCAACCGTCTTaGAGTTTATATTCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFILTQPS*SLYSSE
Trigger: TTCACTAGAATATAAACTCCAAGACGGTTGGGTTAG...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CCA 90 bp AGTTTACAGTCATTAAGAGCATCTAATTGTAACTCCTGTGCAACTCTAAAGTCTCACCAAAAGCATACATaGGAGAAAGAATACCACCTT +
Preference number: 4 (lower is better)
Translates to: SLQSLRASNCNSCATLKSHQKHT*EKEYHL
Trigger: AAGGTGGTATTCTTTCTCCCATGTATGCTTTTGGTG...AGACTTTAGAGTTGCACAGGAGTTACAATTAGATGCTCTTAATGACTGTAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAAGATGCTGACAATTTaGGGATTGCTAAGATTGTCT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRKMLTI*GLLRLS
Trigger: AGACAATCTTAGCAATCCTCAAATTGTCAGCATCTT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCTTTCTCACATACCTaGCAAATTAAAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSFSHT*QIKEDP
Trigger: GGGATCTTCTTTAATTTGTCAGGTATGTGAGAAAGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTTTCATCTGATATCTaGTCACCATTCTTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFSSDI*SPFLLV
Trigger: CACTAGCAAGAATGGTGATCAGATATCAGATGAAAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACAGCACTTTTCATCTaGTATCTGATCACCATTCTT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTALFI*YLITIL
Trigger: AAGAATGGTGATCAGATATCAGATGAAAAGTGCTGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCAAGATGCTCCAAATaGACACTTATACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSRCSK*TLIQHF
Trigger: GAAATGCTGTATAAGTGTTCATTTGGAGCATCTTGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTATTTCCTTCTAAAATaGGCTGCTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRYFLLK*AAPVSL
Trigger: TAGAGAAACTGGAGCAGCTCATTTTAGAAGGAAATA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTATTTCCTTCTAAAATaGGCTGCTCCAGTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFYFLLK*AAPVSL
Trigger: TAGAGAAACTGGAGCAGCTCATTTTAGAAGGAAATA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGTTGAAGAAACCTTATaGTGTCTTTGGCTTTACATC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFVEETL*CLWLYI
Trigger: GATGTAAAGCCAAAGACATCATAAGGTTTCTTCAAC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR TCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR TCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAGAAACTCTCTGGATaGTTGTCTAAGACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKKLSG*LSKTSD
Trigger: ATCTGAAGTCTTAGACAATCATCCAGAGAGTTTCTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAATCAGGAGAATGTATATaGTTCTGCATTAACTCCAAA +
Preference number: 4 (lower is better)
Translates to: EESGIKVHSSNLDSTSSESGECI*FCINSK
Trigger: TTTGGAGTTAATGCAGAAGCATATACATTCTCCTGA...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTATCCAGGGAAGTGTTaGTTCCTTCAAAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRYPGKC*FLQKDD
Trigger: ATCATCTTTTTGAAGGAAGCAACACTTCCCTGGATA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR GCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGGTACTGAATATCATTaGTGCTCATATCTAAAGACC +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVGTEYH*CSYLKT
Trigger: GGTCTTTAGATATGAGCAGCAATGATATTCAGTACC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR GCA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFITNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR GCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCTTATACAGCATTTCTaGCTTAGGGCATCAATATCT +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLIQHF*LRASIS
Trigger: AGATATTGATGCCCTAAGCCAGAAATGCTGTATAAG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAACTGTTTCAGAGTTaGACATTTCACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKLFQS*TFHCRI
Trigger: GATCCTACAGTGAAATGTCCAACTCTGAAACAGTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAAACTGTTTCAGAGTTaGACATTTCACTGTAGGATC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRKLFQS*TFHCRI
Trigger: GATCCTACAGTGAAATGTCCAACTCTGAAACAGTTT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGTACAAAAGACAGCTaGTTATATGACAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGTKDS*LYDRLN
Trigger: GTTTAACCTGTCATATAACCAGCTGTCTTTTGTACC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CCA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCCTTTTGTCTCTTATTTaGATAGGCCAGTCTTTCACA +
Preference number: 4 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFLLSLI*IGQSFT
Trigger: TGTGAAAGACTGGCCTATCCAAATAAGAGACAAAAG...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CCA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATTTTGCACTTCATGTaGAAGATTGATGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFILHFM*KIDVPN
Trigger: GTTTGGGACATCAATCTTCCACATGAAGTGCAAAAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CCA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VATMHSTITFLGNKMRLVNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR GCA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTACCAATTTAAGTAAATaGCTTGTCGCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFTNLSK*LVANTF
Trigger: GAATGTATTGGCGACAAGGCATTTACTTAAATTGGT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR GCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR GCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
CDS-3UTR GCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGATTGTATCTCTTTCTaGTTTTGTGTACCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFDCISF*FCVPSV
Trigger: TACTGAAGGTACACAAAAGCAGAAAGAGATACAATC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTTCCGTTGAATTTGTaGATTCACTCAAACACATCA +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFPLNL*IHSNTS
Trigger: TGATGTGTTTGAGTGAATCCACAAATTCAACGGAAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
34% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CCA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CCA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTAATTTAAGTATAATTTaGAAGCCTAGGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTNLSII*KPRVAD
Trigger: ATCTGCCACCCTAGGCTTCCAAATTATACTTAAATT...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS TCA 90 bp CTGACTATCAACTTCTTCAGAGTTTCCTCGTCCTCTTCGCACCCCTaGCAGCTGCCACTAGCCATGGTGGCACCTGCTTCCAACCCGCCG +
Preference number: 5 (lower is better)
Translates to: LTINFFRVSSSSSHP*QLPLAMVAPASNPP
Trigger: CGGCGGGTTGGAAGCAGGTGCCACCATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGACGAGGAAACTCTGAAGAAGTTGATAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGAGGCAAATGCTATTGTaGGCCACATCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: SATWSAILCCRVLVRLALRQMLL*ATSRAS
Trigger: GCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCT...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: SATWSAILCCRVLVRLALRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS TCA 90 bp GCAGATGCCTGGAAAACTTCTGAGGAGGGCCAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATTCTCTGGGTACTGCTGCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: ADAWKTSEEGQTAER*DLQCCILWVLLHSF
Trigger: AAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCAGAAGTTTTCCAGGCATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS GCA 90 bp CCTGGAAAACTTCTGAGGAGGGCCAAACAGCTGAGCGCTGAGATCTaGAATGCTGCATTCTCTGGGTACTGCTGCACAGCTTTCACCACA +
Preference number: 5 (lower is better)
Translates to: PGKLLRRAKQLSAEI*NAAFSGYCCTAFTT
Trigger: TGTGGTGAAAGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCAGAAGTTTTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS CCA 90 bp GAGGCGCGCTCGGAGTACGTGAACACCAGCAGATCCTCCAGGATTTaGACCAGCGTTTCTATCTGTTTTCCTTCCTGGACATTGTTCAGC +
Preference number: 5 (lower is better)
Translates to: EARSEYVNTSRSSRI*TSVSICFPSWTLFS
Trigger: GCTGAACAATGTCCAGGAAGGAAAACAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: RSKEPLEANSITNIRGRILQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGATCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: SRRSKEPLEANSITNIRGSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: SRRSKEPLEANSITNIRGPGKLP*MKNASA
Trigger: TGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGG...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: RSKEPLEANSITNIRGRILLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGATTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: SRRSKEPLEANSITNIRGLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTERSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGACTCCTTGCTACAGCTaGTATCTTTGGGAGAGAGTG +
Preference number: 5 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKTPCYS*YLWERV
Trigger: CACTCTCTCCCAAAGATACAAGCTGTAGCAAGGAGT...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS GCA 90 bp TTAGGCCCTTCATGCTCTCCACTCCATGTCTCTGGCCTCATTTACTaGCTCTTATCAAGCTCTCCCTTGCCTAAGGAATCGCTAGGGAAT +
Preference number: 5 (lower is better)
Translates to: LGPSCSPLHVSGLIY*LLSSSPLPKESLGN
Trigger: ATTCCCTAGCGATTCCTTAGGCAAGGGAGAGCTTGATAAGAGGCAGTAAATGAGGCCAGAGACATGGAGTGGAGAGCATGAAGGGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS GCA 90 bp GGGATGAGTTTTACGGGACTACGTCTCAAGGCCCACAGAGATGCCTaGTCTGCTAATGGGCTGGACAAGATTAAAAGGAGTATTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GMSFTGLRLKAHRDA*SANGLDKIKRSIVS
Trigger: GCTGACAATACTCCTTTTAATCTTGTCCAGCCCATTAGCAGAGCAGGCATCTCTGTGGGCCTTGAGACGTAGTCCCGTAAAACTCATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS-3UTR CAA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAATAACTGTTAGTATTTaGGGGACCACTGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQITVSI*GTTAAI
Trigger: AATGGCAGCAGTGGTCCCCAAAATACTAACAGTTAT...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RSKEPLEANSITNIRGRIHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SATWSAILCCRVLVRLALFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACATTTGTTCTAAGAGAGTaGACAATGCATTCGCAGATG +
Preference number: 5 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTFVLRE*TMHSQM
Trigger: CATCTGCGAATGCATTGTCAACTCTCTTAGAACAAA...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAGCGCGAGCCTTTATATaGAAGAGCCAAGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEARAFI*KSQGFM
Trigger: CATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCGC...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: EANSITNIRGRIPAASKDLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAATTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: RSKEPLEANSITNIRGRIILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: SRRSKEPLEANSITNIRGLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGGCGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGAAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: SRRSKEPLEANSITNIRGRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...TCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: GTNPSCQQRYQTGVVEVARSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...TGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPASKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAGGCTAACTCCATCACCAACATCCGGGGACGAATCCCAGCTGCCAGCAAAGATTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: EANSITNIRGRIPAASKDSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...ATCTTTGCTGGCAGCTGGGATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAACACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QLPAKISNWGGGGGKAPQHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...TTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGATCCAAGGAACCCTTGGAGGCTAACTCCATCACCAACATCCGGGGACGAATCTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: RSKEPLEANSITNIRGRICKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...GATTCGTCCCCGGATGTTGGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCGAGCCTTTATATTGAAGAGCTACAGCTTGTATCTTaGGGAGAGAGTGCCGGTCTT +
Preference number: 5 (lower is better)
Translates to: CANENHRGRRSASLYIEELQLVS*GESAGL
Trigger: AAGACCGGCACTCTCTCCCAAAGATACAAGCTGTAG...CTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCTGTTTCAATATGCTCTaGAGTTCCATGGTACAGGAT +
Preference number: 5 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSCFNML*SSMVQD
Trigger: ATCCTGTACCATGGAACTCAAGAGCATATTGAAACA...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679532.1
CDS TCA 90 bp CTTTCCAGACCCAACTTAAATGTCACAGGCACAGAAATGCTTTCCTaGCTCCACAGTCTGAATCAGATTCCCCTGAGGTACCACAGAGCA +
Preference number: 5 (lower is better)
Translates to: LSRPNLNVTGTEMLS*LHSLNQIPLRYHRA
Trigger: TGCTCTGTGGTACCTCAGGGGAATCTGATTCAGACTGTGGAGTCAGGAAAGCATTTCTGTGCCTGTGACATTTAAGTTGGGTCTGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS-3UTR CAA 90 bp CGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCCATTTTAAGAATCAATaGGTGAACACCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: RIPAASKDIKLGWWRWQSHFKNQ*VNTKDF
Trigger: GAAGTCCTTGGTGTTCACCAATTGATTCTTAAAATG...GCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CCTCCAAGGCAAATGCTATTGTTGGCCACATCCAGGGCCAGCCTCCTTAAGAGCAAAGATGCTGACAATTaGAGGATTGCTAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: PPRQMLLLATSRASLLKSKDADN*RIAKIV
Trigger: GACAATCTTAGCAATCCTCAAATTGTCAGCATCTTT...GCTCTTAAGGAGGCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCTTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAAAAGAAGATCCCTCCTTaGCTTGATTGGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEKKIPP*LDWHLL
Trigger: GAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCTT...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTCTTTTGTCTCTTATTaGGATAGGCCAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: ASKDIKLGWWRWQSTTSSSFVSY*DRPVFH
Trigger: GTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGA...AGAGCTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCACATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCACTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGGTGGTGGAGGTGGCAAAGCACCACAAGCTCTTGTCTTAACAGCCTGAGTGATATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: GWWRWQSTTSSCLNSLSDILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...ATCACTCAGGCTGTTAAGACAAGAGCTTGTGGTGCTTTGCCACCTCCACCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCAGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPAEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTATTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: TSGARNPGVPSDVFIPILFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCATTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGACGAATCCCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAATGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: GRIPAASKDIKLGWWRWQCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...TTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGGGATTCGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CCAGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACATTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: PAASKDIKLGWWRWQSTTLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...TGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAAATGCTTGTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: QEMRAVLCRCAHSPAKCLLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...CAAGCATTTGGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCAGATCCTCCAGGATTaGGACCAGCGTTTCTATCTG +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEQILQD*DQRFYL
Trigger: CAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGATCCAGGTCATCACTTaGAGCAAACACACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTEIQVIT*SKHTVH
Trigger: ATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGAT...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp TCAGCTACGTGGAGTGCAATCCTGTGCTGTAGGGTTCTAGTGAGGCTGGCTTTGAATGTCTTTGCAAATTaGGTGAGCAACGCTGTAATA +
Preference number: 5 (lower is better)
Translates to: SATWSAILCCRVLVRLALNVFAN*VSNAVI
Trigger: TATTACAGCGTTGCTCACCAAATTTGCAAAGACATT...CAAAGCCAGCCTCACTAGAACCCTACAGCACAGGATTGCACTCCACGTAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCACATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPALFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: SRRVERSRSKIWPPPVPINVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: STSLREIMPLGCFGQPSTNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCTGCCAGCAAAGATATCAAACTGGGGTGGTGGAGGTGGCAAAGCACCACAAGTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: SCQQRYQTGVVEVAKHHKLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...CTTGTGGTGCTTTGCCACCTCCACCACCCCAGTTTGATATCTTTGCTGGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS TCA 90 bp CTCCACAGTCTGAATCAGATTCCCCTGAGGTACCACAGAGCATCCTaGAACAAGAAAATTCATTCTGGCACTGAAACTCTCCACTTTAGG +
Preference number: 5 (lower is better)
Translates to: LHSLNQIPLRYHRAS*NKKIHSGTETLHFR
Trigger: CCTAAAGTGGAGAGTTTCAGTGCCAGAATGAATTTTCTTGTTTCAGGATGCTCTGTGGTACCTCAGGGGAATCTGATTCAGACTGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS TCA 90 bp TTGGAGGATCACTTGAGTGCAGAAGGTCAAGGCTGCAACAAGCTATaGTCATGCCACTGTGAGCCAGCCTTAACAGTCTTATCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: LEDHLSAEGQGCNKL*SCHCEPALTVLSSK
Trigger: TTTTGAAGATAAGACTGTTAAGGCTGGCTCACAGTGGCATGATCATAGCTTGTTGCAGCCTTGACCTTCTGCACTCAAGTGATCCTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS CCA 90 bp GGGAAATGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTaGTACATAAGGAGATTATTTAGTGCCCAGCATGCGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GKWPSSSPIFSCKLF*YIRRLFSAQHAASC
Trigger: GCAGGAGGCCGCATGCTGGGCACTAAATAATCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCATTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000680790.1
CDS CCA 90 bp AACCCTTGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTaGTACATAAGGAGATTATTTAGTGCCCAGCATGCGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: NPWPSSSPIFSCKLF*YIRRLFSAQHAASC
Trigger: GCAGGAGGCCGCATGCTGGGCACTAAATAATCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCAAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAACAGACACTGAATTTCTaGGTCATCTGGATACATCTG +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGEQTLNF*VIWIHL
Trigger: CAGATGTATCCAGATGACCAAGAAATTCAGTGTCTG...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp TTTATATTGAAGAGCCAAGGCTTCATGGCATCAACTTCAGCCTGTCCCTTGCTGAAGAGTTCCACCAATTaGGGACTGCTCTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: FILKSQGFMASTSACPLLKSSTN*GLLSFS
Trigger: TGAGAAAGAGAGCAGTCCCAAATTGGTGGAACTCTT...CAGCAAGGGACAGGCTGAAGTTGATGCCATGAAGCCTTGGCTCTTCAATATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAGGCAAATGCTATTGTaGGCCACATCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSRQMLL*ATSRAS
Trigger: GCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCAGCCAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: YLSQEMRAVLCRCAHSPARSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...GGCTGGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCTAGGCAGGTCAGCCAAAATCAAGTCAGGGGCAATCTGAGATATTGGAATGGTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: SRQVSQNQVRGNLRYWNGSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...ACCATTCCAATATCTCAGATTGCCCCTGACTTGATTTTGGCTGACCTGCCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTCTTTTTCCCATCTTCGGTATTGATGACCAGGAGAGTACCAGACTGTGTCCCAACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LFFPSSVLMTRRVPDCVPTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...TGGGACACAGTCTGGTACTCTCCTGGTCATCAATACCGAAGATGGGAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ACTTCAGGTGCACGAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: TSGARNPGVPSDVFIPILHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...TAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTCGTGCACCTGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATATTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGIFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS GCA 90 bp TCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTaGATCCAAGTTTCTGGACTTCATCATTGGCTGAAGTTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SVAPLRLSQTAHVKL*IQVSGLHHWLKLGG
Trigger: TCCTCCTAACTTCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS-3UTR CAA 90 bp ACTCACTTCTTGAATTCTTTCACTCATAGGGAATGCTTTCATAGCTTCCACCACCAGATCCTCCAGGATTaGGACCAGCGTTTCTATCTG +
Preference number: 5 (lower is better)
Translates to: THFLNSFTHRECFHSFHHQILQD*DQRFYL
Trigger: CAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTG...GTGGTGGAAGCTATGAAAGCATTCCCTATGAGTGAAAGAATTCAAGAAGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp CAGTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTTGCATCCAGACTTCTATTAATTaGCACAGAAGTGACCAACCC +
Preference number: 5 (lower is better)
Translates to: QSVAPLRLSQTAHVKLCIQTSIN*HRSDQP
Trigger: GGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTG...GATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp TCATCAGAAACATCCAAATGTGTGCCAACGAGAATCACAGGGGAAGAAGAAGCGCCATTAAGCTTTGCATaGTACCTGGACAGACTTCTA +
Preference number: 5 (lower is better)
Translates to: SSETSKCVPTRITGEEEAPLSFA*YLDRLL
Trigger: TAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGG...CGCTTCTTCTTCCCCTGTGATTCTCGTTGGCACACATTTGGATGTTTCTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTTCTGGACTTCATCATaGGCTGGAAATGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCFWTSS*AGNECM
Trigger: CATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTGGAAACCAGAATTTTaGCCAGCAGATGTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKEWKPEF*PADVQF
Trigger: GAACTGGACATCTGCTGGCAAAAATTCTGGTTTCCA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp CTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: LFLLLCTFSIFPVVAQYQHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...CTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAGCAGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTCTACCACCACTGTTATGATGTTGGAATCACTGAAAGCTGCATAAGAAAACAGGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: VYHHCYDVGITESCIRKQANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...CTGTTTTCTTATGCAGCTTTCAGTGATTCCAACATCATAACAGTGGTGGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCTCAACCATAGGCCATGGGGCACAACCATATTCTTTAACTGGATCAGGTAATTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: FSTIGHGAQPYSLTGSGNFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...ATTACCTGATCCAGTTAAAGAATATGGTTGTGCCCCATGGCCTATGGTTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGTATTTAAGTCAAGAAATGAGAGCTGTCCTCTGTCGGTGTGCCCACAGCCCTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SVFKSRNESCPLSVCPQPCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...GGGCTGTGGGCACACCGACAGAGGACAGCTCTCATTTCTTGACTTAAATACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCAACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAATGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGECKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GGGAACTTTGACCTAATCAGTGTTGGCTTCTCAGAGGTTTTGACACAGGAGCTACCATCATTCACATCATaGCCCTGTTTGGAAAACAGT +
Preference number: 5 (lower is better)
Translates to: GNFDLISVGFSEVLTQELPSFTS*PCLENS
Trigger: ACTGTTTTCCAAACAGGGCAATGATGTGAATGATGG...TAGCTCCTGTGTCAAAACCTCTGAGAAGCCAACACTGATTAGGTCAAAGTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTCTCGTGAAGCTGATGTaGGAGGATCACTTGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDILVKLM*EDHLSA
Trigger: TGCACTCAAGTGATCCTCCAACATCAGCTTCACGAG...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS TCA 90 bp AATAAACAAGAGTTCTCAAAGAAAGCAAATCAAGTAGAAACGGGATaGGTTTTACGGGACTACGTCTCAAGGCCCACAGAGATGCCTGCT +
Preference number: 5 (lower is better)
Translates to: NKQEFSKKANQVETG*VLRDYVSRPTEMPA
Trigger: AGCAGGCATCTCTGTGGGCCTTGAGACGTAGTCCCGTAAAACTCATCCCGTTTCTACTTGATTTGCTTTCTTTGAGAACTCTTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481256.1
ENST00000681136.1
CDS GCA 90 bp AGGACTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACTTCTATTAATTTGCACAGAAGTGAC +
Preference number: 5 (lower is better)
Translates to: RTSQSFPTSWGPIKL*IVPGQTSINLHRSD
Trigger: GTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000416796.5
ENST00000474202.1
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS GCA 90 bp GGACTTCCACATTATTGCCTCTCTCAAACAGCACATGTAAAGCTTTaGATCCAAGTTTCTGGACTTCATCATTGGCTGGAAATGAGTGCA +
Preference number: 5 (lower is better)
Translates to: GLPHYCLSQTAHVKL*IQVSGLHHWLEMSA
Trigger: TGCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGGCAATAATGTGGAAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAGATCCTCCAGGATTaGGACCAGCGTTTCTATCTG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQILQD*DQRFYL
Trigger: CAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TACTCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAACAGACTTCTATTAATTaGCACAGAAGTGACCAACCC +
Preference number: 5 (lower is better)
Translates to: YSCRLCVASHQKHPNVCQQTSIN*HRSDQP
Trigger: GGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTG...TTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGCAATGCCGTACTTTTGCAAAACACTaGCAACAGAGGTTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: VCPLMFLSPFYSSTEQCRTFAKH*QQRFRN
Trigger: GTTTCTAAACCTCTGTTGCAAGTGTTTTGCAAAAGT...ACGGCATTGCTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGGCAAATGCTATTGTaGGCCACATCCAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFRQMLL*ATSRAS
Trigger: GCTGGCCCTGGATGTGGCCAACAATAGCATTTGCCT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCGCGAGCCTTTATATaGAAGAGCCAAGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYARAFI*KSQGFM
Trigger: CATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: HFHNRAILLSNIESSVYHLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: KEKIFVPHPPHITFLSVENVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACTTCCACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: HFHNRAILLSNIESSVYHEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...GTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TATCATTGCTGCTCATATCTAAAGACCGCAAGTGTGGAAGATTTAAAATTGCTTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: YHCCSYLKTASVEDLKLLRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...AAGCAATTTTAAATCTTCCACACTTGCGGTCTTTAGATATGAGCAGCAATGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCGATCCAAGGAACCCTaGGAGGCTAACTCCATCACC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFRSKEP*EANSIT
Trigger: GGTGATGGAGTTAGCCTCCAAGGGTTCCTTGGATCG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGCTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TTCCTATCCAAAGAGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: FLSKEQCSSEGRGFSLSQCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...CTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCTCTTTGGATAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTCCTTCATAGGCTGCTCGGTAAACTGATCCAAAACTGCCATCACCTAGGAGAATGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: LLHRLLGKLIQNCHHLGECLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...TTCTCCTAGGTGATGGCAGTTTTGGATCAGTTTACCGAGCAGCCTATGAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATATCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGISYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAAACCCTGGTGTGCCCTCTGATGTTTTTATCCCCATTCTACAGCAGTACTGAGTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ETLVCPLMFLSPFYSSTECIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...CTCAGTACTGCTGTAGAATGGGGATAAAAACATCAGAGGGCACACCAGGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCATGAAGAAGGACTCCTaGAAATTAAGGCTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: SRRVERSRSKIWPPPVPIMKKDS*KLRLSF
Trigger: AAACGAGAGCCTTAATTTCAAGGAGTCCTTCTTCAT...GATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680018.1
ENST00000680425.1
CDS GCA 90 bp CTCCTTGAAATTAAGGCTCTCGTTTATGATGGTTTTCCGAAGTTTTaGCAAAGCATCAGATTCCTCGGTGGCATTCACAAAGTGGTAATC +
Preference number: 5 (lower is better)
Translates to: LLEIKALVYDGFPKF*QSIRFLGGIHKVVI
Trigger: GATTACCACTTTGTGAATGCCACCGAGGAATCTGATGCTTTGGCAAAACTTCGGAAAACCATCATAAACGAGAGCCTTAATTTCAAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680018.1
ENST00000680425.1
CDS-3UTR CAA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAATTTCCTTCCTGGACATaGTTCAGCCTGACTATCAAC +
Preference number: 5 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQFPSWT*FSLTIN
Trigger: GTTGATAGTCAGGCTGAACAATGTCCAGGAAGGAAA...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp AAGGAATCGCTAGGGAATGTAAACAATGCAGCACATGAAGCACAATTTCCTCTTTTCTGGACTTCATCATaGGCTGGAAATGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: KESLGNVNNAAHEAQFPLFWTSS*AGNECM
Trigger: CATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA...AAGAGGAAATTGTGCTTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGACAGCAACTCACTTCTaGAATTCTTTCACTCATAGG +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKETATHF*NSFTHR
Trigger: CCTATGAGTGAAAGAATTCAAGAAGTGAGTTGCTGT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp ATTAATTGCTGCAATAAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAGCGCGAGCCTTTATATaGAAGAGCCAAGGCTTCATG +
Preference number: 5 (lower is better)
Translates to: INCCNKVVLPLPVFPTIIARAFI*KSQGFM
Trigger: CATGAAGCCTTGGCTCTTCAATATAAAGGCTCGCGC...TATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTTATTGCAGCAATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAAGAGTCAGGAATAAAGGTCCATTCATCAAATTTAGACAGCACATCTTCAGAACTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: EESGIKVHSSNLDSTSSELQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...TTCTGAAGATGTGCTGTCTAAATTTGATGAATGGACCTTTATTCCTGACTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFILQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GTACTGAGCAATGCCGTAGTCAGCAATCTTTGCAATGATGGCAGCATTGGGATACTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: VLSNAVVSNLCNDGSIGILFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...TATCCCAATGCTGCCATCATTGCAAAGATTGCTGACTACGGCATTGCTCAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGGGGTTTCAGGTCTCGGTATATAATCATGGCTGAGTGGAGGTATCTCAAACCACTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: WGFRSRYIIMAEWRYLKPLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...TGGTTTGAGATACCTCCACTCAGCCATGATTATATACCGAGACCTGAAACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCCACATCTCTACGCGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: STSLREIMPLGCFGQPSTCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...AGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCGCGTAGAGATGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp AATGGGGAAGCTCTATCACAGGCCTGTGGTCAGACAAACTGTGCCATGATTTTATGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: NGEALSQACGQTNCAMILCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...TAAAATCATGGCACAGTTTGTCTGACCACAGGCCTGTGATAGAGCTTCCCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680425.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKESYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: KEKIFVPHPPHITFLSVETSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAAACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS TCA 90 bp AAATACTCAAGGCCATTTGTTTTACATATCTATCATACTTACTGGTaGACACCAAGGACTTCCCAATCATTTCCAACATCCTGGGGTCCC +
Preference number: 5 (lower is better)
Translates to: KYSRPFVLHIYHTYW*TPRTSQSFPTSWGP
Trigger: GGGACCCCAGGATGTTGGAAATGATTGGGAAGTCCTTGGTGTTCACCAGTAAGTATGATAGATATGTAAAACAAATGGCCTTGAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474202.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGGAAACCAGAATTTTaGCCAGCAGATGTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSWKPEF*PADVQF
Trigger: GAACTGGACATCTGCTGGCAAAAATTCTGGTTTCCA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAAGAGTTCCACCAATTaGGGACTGCTCTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYKSSTN*GLLSFS
Trigger: TGAGAAAGAGAGCAGTCCCAAATTGGTGGAACTCTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAAAGAGTTCCACCAATTaGGGACTGCTCTCTTTCTCA +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSKSSTN*GLLSFS
Trigger: TGAGAAAGAGAGCAGTCCCAAATTGGTGGAACTCTT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACATCCAGGTCATCACTTaGAGCAAACACACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYIQVIT*SKHTVH
Trigger: ATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGAT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGC +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKERSLFL*SLIWIG
Trigger: GCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCT...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTGCAGTGCTGGGTCTaGAAAATGAAGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLQCWV*KMKKDS
Trigger: GGAGTCCTTCTTCATTTTCAAGACCCAGCACTGCAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCCAATACATTCTGTTaGGGCGAAGTGCTCGTTCTC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFANTFC*GEVLVL
Trigger: GAGAACGAGCACTTCGCCCAAACAGAATGTATTGGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTCCAGTTCCTATCCAAAGAGCTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: ELKDPGVKYGLLQFLSKELFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...CTCTTTGGATAGGAACTGGAGGAGGCCATATTTTACTCCTGGATCTTTCAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTCTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CACAACAGGGCTATTTTGCTTAGCAATATAGAGAGCAGTGTCTACCACCACTGTAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: HNRAILLSNIESSVYHHCRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...ACAGTGGTGGTAGACACTGCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TACTCATGCAGGCTTTGCGTTGCTTCTCATCAGAAACATCCAAATGTGTGCCAATGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: YSCRLCVASHQKHPNVCQCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...TTGGCACACATTTGGATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS GCA 90 bp ACAAGATTAAAAGGAGTATTGTCAGCATTGAACTCTGTTTTGTCCTaGTTCTCCTTTCAGCATGATTATCAGTTAACTGACAGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TRLKGVLSALNSVLS*FSFQHDYQLTDRLS
Trigger: GCTCAGCCTGTCAGTTAACTGATAATCATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTTCCTTCCTGGACATaGTTCAGCCTGACTATCAAC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCFPSWT*FSLTIN
Trigger: GTTGATAGTCAGGCTGAACAATGTCCAGGAAGGAAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACCAGACTTCTATTAATTaGCACAGAAGTGACCAACCC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYQTSIN*HRSDQP
Trigger: GGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTG...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACAGACTTCTATTAATTaGCACAGAAGTGACCAACCC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSQTSIN*HRSDQP
Trigger: GGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TTCTGGACTTCATCATTGGCTGGAAATGAGTGCATGGCATCAAAAATTAACATGCCATTAAGCTTTGCATaGTACCTGGACAGACTTCTA +
Preference number: 5 (lower is better)
Translates to: FWTSSLAGNECMASKINMPLSFA*YLDRLL
Trigger: TAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGG...CATGTTAATTTTTGATGCCATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACCATTAAGCTTTGCATaGTACCTGGACAGACTTCTA +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSPLSFA*YLDRLL
Trigger: TAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GGAGATCTAAGGTCTTCAGTCCAATCACTGACAAGTTTACACTGGCATTATGAAACAGCAACTCACTTCTaGAATTCTTTCACTCATAGG +
Preference number: 5 (lower is better)
Translates to: GDLRSSVQSLTSLHWHYETATHF*NSFTHR
Trigger: CCTATGAGTGAAAGAATTCAAGAAGTGAGTTGCTGT...TTCATAATGCCAGTGTAAACTTGTCAGTGATTGGACTGAAGACCTTAGATCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACAGACACTGAATTTCTaGGTCATCTGGATACATCTG +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSQTLNF*VIWIHL
Trigger: CAGATGTATCCAGATGACCAAGAAATTCAGTGTCTG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAGAAGATCCCTCCTTaGCTTGATTGGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKKIPP*LDWHLL
Trigger: GAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAAGAAGATCCCTCCTTaGCTTGATTGGCATCTGCTC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRKKIPP*LDWHLL
Trigger: GAGCAGATGCCAATCAAGCAAAGGAGGGATCTTCTT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTCGCTTTTCGTACATCTaGTTCACGAGATCCACTATT +
Preference number: 5 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVRFSYI*FTRSTI
Trigger: AATAGTGGATCTCGTGAACAAGATGTACGAAAAGCG...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCACGCTTTTCGTACATCTaGTTCACGAGATCCACTATT +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSRFSYI*FTRSTI
Trigger: AATAGTGGATCTCGTGAACAAGATGTACGAAAAGCG...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCATGCAGGCTTTGCGTaGCTTCTCATCAGAAACATC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHAGFA*LLIRNI
Trigger: GATGTTTCTGATGAGAAGCAACGCAAAGCCTGCATG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATCACTTTGAGCAAACACACTGTCCATAGAAGAGTCAGGAATAAAGGTCCATTCATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: ITLSKHTVHRRVRNKGPFILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...GAATGGACCTTTATTCCTGACTCTTCTATGGACAGTGTGTTTGCTCAAAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAATGTGGTCCACAACTaGGCCCAAAAGAATACAGCC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFNVVHN*AQKNTA
Trigger: GGCTGTATTCTTTTGGGCCAAGTTGTGGACCACATT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGCAATGATGGCAGCATaGGGATACAGTGTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFAMMAA*GYSVKS
Trigger: GCTTTTCACACTGTATCCCAATGCTGCCATCATTGC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTCCCATCTTCGGTATaGATGACCAGGAGAGTACCA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFPSSV*MTRRVP
Trigger: TGGTACTCTCCTGGTCATCAATACCGAAGATGGGAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCATCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AGCAGTGTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: SSVLLKAEGFHSPRIRHFCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...AAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAACACTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATTACCTCCCTTAAAAAGTGCACGCAGTCTATTAGTCCACAGAGTTTTTCAGTTACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: ITSLKKCTQSISPQSFSVTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...AACTGAAAAACTCTGTGGACTAATAGACTGCGTGCACTTTTTAAGGGAGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAAATCCCTGAGGCAAAATATAGCATAGTAATTGAGAAGAACTGGATGTTCATCTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: QIPEAKYSIVIEKNWMFIFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...GATGAACATCCAGTTCTTCTCAATTACTATGCTATATTTTGCCTCAGGGATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTACATCATTGCCCTGTTaGGAAAACAGTATCCTTCTA +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFTSLPC*ENSILL
Trigger: TAGAAGGATACTGTTTTCCAAACAGGGCAATGATGT...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAAATGAAGAAGGACTCCTaGAAATTAAGGCTCTCGTTT +
Preference number: 5 (lower is better)
Translates to: KEKIFVPHPPHITFLSVEMKKDS*KLRLSF
Trigger: AAACGAGAGCCTTAATTTCAAGGAGTCCTTCTTCAT...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680018.1
ENST00000680425.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTACCACCTTCAATAAATaGTGCTGGAAAAGCTGGATA +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPTTFNK*CWKSWI
Trigger: TATCCAGCTTTTCCAGCACAATTTATTGAAGGTGGT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp CTTTTGTGTACCTTCAGTATTTTTCCGGTTGTAGCCCAATACCAGCATGACATTTATGCACAAAACTCCTaGCTACAGCTTGTATCTTTG +
Preference number: 5 (lower is better)
Translates to: LLCTFSIFPVVAQYQHDIYAQNS*LQLVSL
Trigger: CAAAGATACAAGCTGTAGCAAGGAGTTTTGTGCATA...AATGTCATGCTGGTATTGGGCTACAACCGGAAAAATACTGAAGGTACACAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCCATTAAGCTTTGCATaGTACCTGGACAGACTTCTA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCPLSFA*YLDRLL
Trigger: TAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTCTGGACTTCATCATaGGCTGGAAATGAGTGCATG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFWTSS*AGNECM
Trigger: CATGCACTCATTTCCAGCCAATGATGAAGTCCAGAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACAGCAACTCACTTCTaGAATTCTTTCACTCATAGG +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTATHF*NSFTHR
Trigger: CCTATGAGTGAAAGAATTCAAGAAGTGAGTTGCTGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCAGACACTGAATTTCTaGGTCATCTGGATACATCTG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCQTLNF*VIWIHL
Trigger: CAGATGTATCCAGATGACCAAGAAATTCAGTGTCTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGGAAACCAGAATTTTaGCCAGCAGATGTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFWKPEF*PADVQF
Trigger: GAACTGGACATCTGCTGGCAAAAATTCTGGTTTCCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATCCAGGTCATCACTTaGAGCAAACACACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRIQVIT*SKHTVH
Trigger: ATGGACAGTGTGTTTGCTCAAAGTGATGACCTGGAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp ACATTTTTAAGGCTTCCTAGCTGTGCTGTCATCATGACTCTGACCGAATTACAATATCTCTTAGTTCATTaGCTGAAAGGTCTAGTGATG +
Preference number: 5 (lower is better)
Translates to: TFLRLPSCAVIMTLTELQYLLVH*LKGLVM
Trigger: CATCACTAGACCTTTCAGCAAATGAACTAAGAGATA...TTGTAATTCGGTCAGAGTCATGATGACAGCACAGCTAGGAAGCCTTAAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCTTTTGTCTCTTATTaGGATAGGCCAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSFVSY*DRPVFH
Trigger: GTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGC +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPRSLFL*SLIWIG
Trigger: GCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTACTCATGCAGGCTTaGCGTTGCTTCTCATCAGAA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLLMQA*RCFSSE
Trigger: TTCTGATGAGAAGCAACGCAAAGCCTGCATGAGTAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GAAAGATGCAGTTTCTCTACTCTAGACCATAAATATGCTTTTTCACTCAAGTCCGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: ERCSFSTLDHKYAFSLKSEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...GGACTTGAGTGAAAAAGCATATTTATGGTCTAGAGTAGAGAAACTGCATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CGAAATAATGCCCTTAGGGTGTTTTGGACAACCTTCCACTTTCACTGTCAAAATAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: RNNALRVFWTTFHFHCQNRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...ATTTTGACAGTGAAAGTGGAAGGTTGTCCAAAACACCCTAAGGGCATTATTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAGGAGAAAATCTTTGTGCCACATCCTCCCCACATTACATTTCTTTCCGTTGAATGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: KEKIFVPHPPHITFLSVECLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...TTCAACGGAAAGAAATGTAATGTGGGGAGGATGTGGCACAAAGATTTTCTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCAAAAATTGCTAACTaGCCATCAGCGGTTCCAACC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSKIAN*PSAVPT
Trigger: GGTTGGAACCGCTGATGGCAAGTTAGCAATTTTTGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATTACACGTATAAGTCGACGAGTTGAAAGATCCAGGAGTAAAATATGGCCTCCTTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: ITRISRRVERSRSKIWPPCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...AGGAGGCCATATTTTACTCCTGGATCTTTCAACTCGTCGACTTATACGTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTTCTTCTGAAGGCAGAGGGTTTTCACTCTCCCAGAATAAGACATTTTGTGTTTTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VLLKAEGFHSPRIRHFVFCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...AAACACAAAATGTCTTATTCTGGGAGAGTGAAAACCCTCTGCCTTCAGAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAACGGTCAAGCAAGATaGTATCTCTTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYNGQAR*YLFLLL
Trigger: CAAAAGCAGAAAGAGATACAATCTTGCTTGACCGTT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTCAGATCCTACCAGACAATAAGCTTCAGGAGACCAATTTAAGTAAATGCCTTAACGGTCAAGCAAGATaGTATCTCTTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LQILPDNKLQETNLSKCLNGQAR*YLFLLL
Trigger: CAAAAGCAGAAAGAGATACAATCTTGCTTGACCGTT...AAGGCATTTACTTAAATTGGTCTCCTGAAGCTTATTGTCTGGTAGGATCTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCACTTCATGTGGAAGATaGATGTCCCAAACGGTCAAG +
Preference number: 5 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFTSCGR*MSQTVK
Trigger: CTTGACCGTTTGGGACATCAATCTTCCACATGAAGT...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTTATCCTCATGGTCTaGGTAGGAGCTGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRFILMV*VGAVEF
Trigger: GAATTCCACAGCTCCTACCAAGACCATGAGGATAAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTCAAAACAGCACAGTATaGGCAAAAACACAGGTAGGT +
Preference number: 5 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSQNSTV*AKTQVG
Trigger: ACCTACCTGTGTTTTTGCCAATACTGTGCTGTTTTG...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp TGGCCATCTTCATCTCCAATCTTCTCATGTAAACTGTTTTGGTACATAAGGAGACATTTTAAGAATCAATaGGTGAACACCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: WPSSSPIFSCKLFWYIRRHFKNQ*VNTKDF
Trigger: GAAGTCCTTGGTGTTCACCAATTGATTCTTAAAATG...TCTCCTTATGTACCAAAACAGTTTACATGAGAAGATTGGAGATGAAGATGGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRPGKLP*MKNASA
Trigger: TGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCCTGGAAAACTTCCTTaGATGAAGAATGCATCAGCA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFPGKLP*MKNASA
Trigger: TGCTGATGCATTCTTCATCAAAGGAAGTTTTCCAGG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGATAACTGTTAGTATTTaGGGGACCACTGCTGCCATT +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRITVSI*GTTAAI
Trigger: AATGGCAGCAGTGGTCCCCAAAATACTAACAGTTAT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000298910.12
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAACTTTTGCAAAACACTaGCAACAGAGGTTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSTFAKH*QQRFRN
Trigger: GTTTCTAAACCTCTGTTGCAAGTGTTTTGCAAAAGT...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCGCTTTTCGTACATCTaGTTCACGAGATCCACTATT +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFRFSYI*FTRSTI
Trigger: AATAGTGGATCTCGTGAACAAGATGTACGAAAAGCG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTATCTCTTAGTTCATTaGCTGAAAGGTCTAGTGATG +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYYLLVH*LKGLVM
Trigger: CATCACTAGACCTTTCAGCAAATGAACTAAGAGATA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCAGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp AAGGTGGTTTTACCACTCCCAGTATTTCCCACAATCATAAGTTTCATTCGGTTAGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: KVVLPLPVFPTIISFIRLGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...TAACCGAATGAAACTTATGATTGTGGGAAATACTGGGAGTGGTAAAACCACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGC +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYRSLFL*SLIWIG
Trigger: GCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTACGGGAAATTCAATaGGCACATTTTTACGCTCCG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLREIQ*AHFYAP
Trigger: CGGAGCGTAAAAATGTGCCAATTGAATTTCCCGTAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGTCAGACAAACTGCTaGGAACCAGCAAATATTCTT +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGQTNC*EPANIL
Trigger: AAGAATATTTGCTGGTTCCAAGCAGTTTGTCTGACC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGAGAAACTCTGGAGCTaGTTCAAATTCCAACTCATC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFEKLWS*FKFQLI
Trigger: GATGAGTTGGAATTTGAACAAGCTCCAGAGTTTCTC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp CTTTCCGTTGAATTTGTGGATTCACTCAAACACATCAATGGAGTACTGACATTTTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: LSVEFVDSLKHINGVLTFSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...AAATGTCAGTACTCCATTGATGTGTTTGAGTGAATCCACAAATTCAACGGAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTGAAGTTGTGTAAGATGCACTGTTTGCAACAGCAACAAAGAGAATTCACATACTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: VKLCKMHCLQQQQREFTYCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...GTATGTGAATTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACACAACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GACAAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: DKESFCVFPRYEDFDSMSCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...TGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTACCACTGTTATGATGTaGGAATCACTGAAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFTTVMM*ESLKAA
Trigger: TGCAGCTTTCAGTGATTCCAACATCATAACAGTGGT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCACAACAGGGCTATTTaGCTTAGCAATATAGAGAGC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHNRAI*LSNIES
Trigger: GCTCTCTATATTGCTAAGCAAAATAGCCCTGTTGTG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAACGGTCAAGCAAGATaGTATCTCTTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCNGQAR*YLFLLL
Trigger: CAAAAGCAGAAAGAGATACAATCTTGCTTGACCGTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCAACGGTCAAGCAAGATaGTATCTCTTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFNGQAR*YLFLLL
Trigger: CAAAAGCAGAAAGAGATACAATCTTGCTTGACCGTT...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTCATTTTAAGAATCAATaGGTGAACACCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCHFKNQ*VNTKDF
Trigger: GAAGTCCTTGGTGTTCACCAATTGATTCTTAAAATG...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACAGCAACTCACTTCTaGAATTCTTTCACTCATAGG +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTATHF*NSFTHR
Trigger: CCTATGAGTGAAAGAATTCAAGAAGTGAGTTGCTGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTTGTTCTAAGAGAGTaGACAATGCATTCGCAGATG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFFVLRE*TMHSQM
Trigger: CATCTGCGAATGCATTGTCAACTCTCTTAGAACAAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAAAGATGCTGACAATTaGAGGATTGCTAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCKDADN*RIAKIV
Trigger: GACAATCTTAGCAATCCTCAAATTGTCAGCATCTTT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAATGTCTTTGCAAATTaGGTGAGCAACGCTGTAATA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCNVFAN*VSNAVI
Trigger: TATTACAGCGTTGCTCACCAAATTTGCAAAGACATT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAATTTCCCCATTTCATaGGGAAAGGATCTTAGTTCC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRNFPIS*GKDLSS
Trigger: GGAACTAAGATCCTTTCCCAATGAAATGGGGAAATT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCTTTTGTCTCTTATTaGGATAGGCCAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSFVSY*DRPVFH
Trigger: GTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTCTTTTGTCTCTTATTaGGATAGGCCAGTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFSFVSY*DRPVFH
Trigger: GTGAAAGACTGGCCTATCCAAATAAGAGACAAAAGA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430804.5
ENST00000679360.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTATTCAGGAGTTCCTaGGTGATTTTACTCATGCAG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLFRSS*VILLMQ
Trigger: CTGCATGAGTAAAATCACCAAGGAACTCCTGAATAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFILQSH*GSTKYK
Trigger: CTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAAT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp GAAGAGGACACAAACAAATGGAAAGATATTCATGCTCACAGACTGGAAGAATTACTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: EEDTNKWKDIHAHRLEELLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...TAATTCTTCCAGTCTGTGAGCATGAATATCTTTCCATTTGTTTGTGTCCTCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS-3UTR CAA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCACTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: VATMHSTITFLGNKMRLVRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ACGGTCAAGCAAGATTGTATCTCTTTCTGCTTTTGTGTACCTTCAGTATTTTTCTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: TVKQDCISFCFCVPSVFFCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...GAAAAATACTGAAGGTACACAAAAGCAGAAAGAGATACAATCTTGCTTGACCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
CDS-3UTR CAA 90 bp CATGACTCTGACCGAATTACAAAAGTTGTAAATTACACGTATAAGTCGACGAGTTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: HDSDRITKVVNYTYKSTSCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...ACTCGTCGACTTATACGTGTAATTTACAACTTTTGTAATTCGGTCAGAGTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTCTTATCTTCAAAAATaGCTAACTTGCCATCAGCGG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFSYLQK*LTCHQR
Trigger: CCGCTGATGGCAAGTTAGCAATTTTTGAAGATAAGA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp AAAGAGAGTTTCTGTGTCTTTCCTAGATATGAGGACTTTGACAGTATGTCATGTTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: KESFCVFPRYEDFDSMSCCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...ACATGACATACTGTCAAAGTCCTCATATCTAGGAAAGACACAGAAACTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAACGGTCAAGCAAGATaGTATCTCTTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFNGQAR*YLFLLL
Trigger: CAAAAGCAGAAAGAGATACAATCTTGCTTGACCGTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp AATTCATCAAACTCATTTGGAAACTTCAAACCCTCTACTATTCTACCTCCAGTTTGTAAGATGCACTGTTaGCAACAGCAACAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: NSSNSFGNFKPSTILPPVCKMHC*QQQQRE
Trigger: TTCTCTTTGTTGCTGTTGCAAACAGTGCATCTTACA...AACTGGAGGTAGAATAGTAGAGGGTTTGAAGTTTCCAAATGAGTTTGATGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp ATAATGCCCATTTCTTCAACAGAGTTTCTCCTTCACCACAAATATCAATCTCCATTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: IMPISSTEFLLHHKYQSPLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...TGGAGATTGATATTTGTGGTGAAGGAGAAACTCTGTTGAAGAAATGGGCATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp GTAGCAACCATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: VATMHSTITFLGNKMRLVLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...GACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCATGGTTGCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCATTTTAAGAATCAATaGGTGAACACCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFHFKNQ*VNTKDF
Trigger: GAAGTCCTTGGTGTTCACCAATTGATTCTTAAAATG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAAAGATGCTGACAATTaGAGGATTGCTAAGATTGTC +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFKDADN*RIAKIV
Trigger: GACAATCTTAGCAATCCTCAAATTGTCAGCATCTTT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGACTTTTGCAAAACACTaGCAACAGAGGTTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRTFAKH*QQRFRN
Trigger: GTTTCTAAACCTCTGTTGCAAGTGTTTTGCAAAAGT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAATGTCTTTGCAAATTaGGTGAGCAACGCTGTAATA +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRNVFAN*VSNAVI
Trigger: TATTACAGCGTTGCTCACCAAATTTGCAAAGACATT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000298910.12
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTGGAAGATCCCATATTTaGCTTAATTTCCCCATTTCA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFGRSHI*LNFPIS
Trigger: TGAAATGGGGAAATTAAGCAAAATATGGGATCTTCC...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGAGATCTCTCTTTCTTTaGTCTCTTATTTGGATAGGC +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRRSLFL*SLIWIG
Trigger: GCCTATCCAAATAAGAGACAAAAGAAAGAGAGATCT...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTCTATTCTACCTCCAGTaGTCAAAATGTCATAGAGTA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLFYLQ*SKCHRV
Trigger: TACTCTATGACATTTTGACAACTGGAGGTAGAATAG...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTAGAAGTAGGCCTTTCTaGAGGATTTTCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFRSRPF*RIFFQT
Trigger: TGTTTGAAAGAAAATCCTCAAGAAAGGCCTACTTCT...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGCTTGGAAAAGGAATaGCAATACAAACAAGTGACA +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCLEKE*QYKQVT
Trigger: TGTCACTTGTTTGTATTGCAATTCCTTTTCCAAGCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp CAATACAAACAAGTGACAGAATCAGTCATCTTTTCTAGGGTATGTCTCTTTTTCTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: QYKQVTESVIFSRVCLFFCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...GAAAAAGAGACATACCCTAGAAAAGATGACTGATTCTGTCACTTGTTTGTATTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000430804.5
ENST00000679360.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTGCATAAGAAAACAGTaGGCTTGTTCTTGTCTCAAT +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFCIRKQ*ACSCLN
Trigger: ATTGAGACAAGAACAAGCCAACTGTTTTCTTATGCA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000636518.1
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
ENST00000681696.1
CDS-3UTR CAA 90 bp TGCAGATTTCTAGAAAAATCGACAAGCAATAGTCCTGTCTTAAGCACAGAATTTTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: CRFLEKSTSNSPVLSTEFLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...AAATTCTGTGCTTAAGACAGGACTATTGCTTGTCGATTTTTCTAGAAATCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000298910.12
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680422.1
ENST00000680425.1
ENST00000680453.1
ENST00000680790.1
CDS-3UTR CAA 90 bp ATGCATTCAACAATTACGTTTTTAGGTAATAAAATGCGTCTCGTCAGACAGACTTTATTACATAGGTATTaGGCCCTGATACTCCTATTG +
Preference number: 5 (lower is better)
Translates to: MHSTITFLGNKMRLVRQTLLHRY*ALILLL
Trigger: CAATAGGAGTATCAGGGCCAAATACCTATGTAATAA...AGTCTGTCTGACGAGACGCATTTTATTACCTAAAAACGTAATTGTTGAATGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000430804.5
ENST00000679532.1
ENST00000679683.1
ENST00000680018.1
ENST00000680425.1
ENST00000680453.1
CDS-3UTR CAA 90 bp TCAGGGTATCCACATTCAAACATAGAGTTGAAAAACAACTCTATTATGTCTAGGGTCAATATTTGTAGGTaGTGCAGTTCAGCATGTATT +
Preference number: 5 (lower is better)
Translates to: SGYPHSNIELKNNSIMSRVNICR*CSSACI
Trigger: AATACATGCTGAACTGCACAACCTACAAATATTGAC...CCTAGACATAATAGAGTTGTTTTTCAACTCTATGTTTGAATGTGGATACCCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS GCA 72 bp CTTCCAACCCGCCGCCCTCCCAGCATGAACGTCCGCTaGTCAGGGAACCGGCAGGGGCGCCGGCCACAGCTC +
Preference number: 6 (lower is better)
Translates to: LPTRRPPSMNVR*SGNRQGRRPQL
Trigger: GAGCTGTGGCCGGCGCCCCTGCCGGTTCCCTGAGCAGCGGACGTTCATGCTGGGAGGGCGGCGGGTTGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000679360.1
ENST00000680235.1
CDS TCA 72 bp AACTTCTTCAGAGTTTCCTCGTCCTCTTCGCACCCCTaGCAGCTGCCACTAGCCATGGTGGCACCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: NFFRVSSSSSHP*QLPLAMVAPAS
Trigger: GGAAGCAGGTGCCACCATGGCTAGTGGCAGCTGTCAGGGGTGCGAAGAGGACGAGGAAACTCTGAAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS TCA 72 bp TGCCTTGAAATAACTTGGAGGCGCGCTCGGAGTACGTaGACACCAGCAGATCCTCCAGGATTTGGACCAGCG +
Preference number: 6 (lower is better)
Translates to: CLEITWRRARST*TPADPPGFGPA
Trigger: CGCTGGTCCAAATCCTGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCGCCTCCAAGTTATTTCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS GCA 72 bp CTTCTGAGGAGGGCCAAACAGCTGAGCGCTGAGATCTaGAATGCTGCATTCTCTGGGTACTGCTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: LLRRAKQLSAEI*NAAFSGYCCTA
Trigger: AGCTGTGCAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS CAA 90 bp GGAGGCGCGCTCGGAGTACGTGAACACCAGCAGATCCTCCAGGATTaGGACCAGCGTTTCTATCTGTTTTCCTTCCTGGACATTGTTCAG +
Preference number: 6 (lower is better)
Translates to: GGALGVREHQQILQD*DQRFYLFSFLDIVQ
Trigger: CTGAACAATGTCCAGGAAGGAAAACAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTGCTGGTGTTCACGTACTCCGAGCGCGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS TCA 72 bp TGGAAAACTTCTGAGGAGGGCCAAACAGCTGAGCGCTaGGATCTGCAATGCTGCATTCTCTGGGTACTGCTG +
Preference number: 6 (lower is better)
Translates to: WKTSEEGQTAER*DLQCCILWVLL
Trigger: CAGCAGTACCCAGAGAATGCAGCATTGCAGATCTCAGCGCTCAGCTGTTTGGCCCTCCTCAGAAGTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS CAA 72 bp CTCGGAGTACGTGAACACCAGCAGATCCTCCAGGATTaGGACCAGCGTTTCTATCTGTTTTCCTTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: LGVREHQQILQD*DQRFYLFSFLD
Trigger: GTCCAGGAAGGAAAACAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTGCTGGTGTTCACGTACTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS GCA 72 bp TTTACGGGACTACGTCTCAAGGCCCACAGAGATGCCTaGTCTGCTAATGGGCTGGACAAGATTAAAAGGAGT +
Preference number: 6 (lower is better)
Translates to: FTGLRLKAHRDA*SANGLDKIKRS
Trigger: ACTCCTTTTAATCTTGTCCAGCCCATTAGCAGAGCAGGCATCTCTGTGGGCCTTGAGACGTAGTCCCGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS CCA 72 bp TCGGAGTACGTGAACACCAGCAGATCCTCCAGGATTTaGACCAGCGTTTCTATCTGTTTTCCTTCCTGGACA +
Preference number: 6 (lower is better)
Translates to: SEYVNTSRSSRI*TSVSICFPSWT
Trigger: TGTCCAGGAAGGAAAACAGATAGAAACGCTGGTCCAAATCCTGGAGGATCTGCTGGTGTTCACGTACTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS CAA 90 bp GGTCCCATTAAGCTTTGCATTGTACCTGGACAGACTTCTATTAATTaGCACAGAAGTGACCAACCCACCTGCTGCACACTCGCGACTCTC +
Preference number: 6 (lower is better)
Translates to: GPIKLCIVPGQTSIN*HRSDQPTCCTLATL
Trigger: GAGAGTCGCGAGTGTGCAGCAGGTGGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000416796.5
ENST00000474202.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS TCA 72 bp CACTTGAGTGCAGAAGGTCAAGGCTGCAACAAGCTATaGTCATGCCACTGTGAGCCAGCCTTAACAGTCTTA +
Preference number: 6 (lower is better)
Translates to: HLSAEGQGCNKL*SCHCEPALTVL
Trigger: TAAGACTGTTAAGGCTGGCTCACAGTGGCATGATCATAGCTTGTTGCAGCCTTGACCTTCTGCACTCAAGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS GCA 72 bp GCTACTCGTGAAGCTGATGTTGGAGGATCACTTGAGTaGAGAAGGTCAAGGCTGCAACAAGCTATGATCATG +
Preference number: 6 (lower is better)
Translates to: ATREADVGGSLE*RRSRLQQAMIM
Trigger: CATGATCATAGCTTGTTGCAGCCTTGACCTTCTGCACTCAAGTGATCCTCCAACATCAGCTTCACGAGTAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS CAA 90 bp CAGGCCTGTGGTCAGACAAACTGTGCCATGATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAGTCACTTAACTGCAGTGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: QACGQTNCAMILQSH*GSTKYKSLNCSAGS
Trigger: AGACCCAGCACTGCAGTTAAGTGACTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAATCATGGCACAGTTTGTCTGACCACAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS CAA 90 bp CTCCATGTCTCTGGCCTCATTTACTGCCTCTTATCAAGCTCTCCCTaGCCTAAGGAATCGCTAGGGAATGTAAACAATGCAGCACATGAA +
Preference number: 6 (lower is better)
Translates to: LHVSGLIYCLLSSSP*PKESLGNVNNAAHE
Trigger: TTCATGTGCTGCATTGTTTACATTCCCTAGCGATTCCTTAGGCAAGGGAGAGCTTGATAAGAGGCAGTAAATGAGGCCAGAGACATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS TCA 72 bp CCCAACTTAAATGTCACAGGCACAGAAATGCTTTCCTaGCTCCACAGTCTGAATCAGATTCCCCTGAGGTAC +
Preference number: 6 (lower is better)
Translates to: PNLNVTGTEMLS*LHSLNQIPLRY
Trigger: GTACCTCAGGGGAATCTGATTCAGACTGTGGAGTCAGGAAAGCATTTCTGTGCCTGTGACATTTAAGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430804.5
CDS CAA 90 bp GTCAGTTGCTCCTCTGAGACTCTCTCAAACAGCACATGTAAAGCTTaGCATCCAAGTTTCTGGACTTCATCATTGGCTGAAGTTAGGAGG +
Preference number: 6 (lower is better)
Translates to: VSCSSETLSNSTCKA*HPSFWTSSLAEVRR
Trigger: CCTCCTAACTTCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGTCTCAGAGGAGCAACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS TCA 72 bp GAGTTCTCAAAGAAAGCAAATCAAGTAGAAACGGGATaGGTTTTACGGGACTACGTCTCAAGGCCCACAGAG +
Preference number: 6 (lower is better)
Translates to: EFSKKANQVETG*VLRDYVSRPTE
Trigger: CTCTGTGGGCCTTGAGACGTAGTCCCGTAAAACTCATCCCGTTTCTACTTGATTTGCTTTCTTTGAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481256.1
ENST00000681136.1
CDS GCA 72 bp AGCTTTGCATTGTACCTGGACAGACTTCTATTAATTTaGACAGAAGTGACCAACCCACCTGGGCAACATAGC +
Preference number: 6 (lower is better)
Translates to: SFALYLDRLLLI*TEVTNPPGQHS
Trigger: GCTATGTTGCCCAGGTGGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644108.1
CDS CCA 72 bp CACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAGGGTCTATTTCTTAACGAGGCTCAACCCCATT +
Preference number: 6 (lower is better)
Translates to: HCWWDCKLVQPL*RVYFLTRLNPI
Trigger: AATGGGGTTGAGCCTCGTTAAGAAATAGACCCTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS CAA 72 bp AAGCTTTGCATTGTACCTGGACAGACTTCTATTAATTaGCACAGAAGTGACCAACCCACCTGCTGCACACTC +
Preference number: 6 (lower is better)
Translates to: KLCIVPGQTSIN*HRSDQPTCCTL
Trigger: GAGTGTGCAGCAGGTGGGTTGGTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000416796.5
ENST00000474202.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS CAA 72 bp TCTGGCCTCATTTACTGCCTCTTATCAAGCTCTCCCTaGCCTAAGGAATCGCTAGGGAATGTAAACAATGCA +
Preference number: 6 (lower is better)
Translates to: SGLIYCLLSSSP*PKESLGNVNNA
Trigger: TGCATTGTTTACATTCCCTAGCGATTCCTTAGGCAAGGGAGAGCTTGATAAGAGGCAGTAAATGAGGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS CAA 72 bp TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAGGGTCTATTTCTTAACGAGGCTCAACCCC +
Preference number: 6 (lower is better)
Translates to: LHCWWDCKLVQP*WRVYFLTRLNP
Trigger: GGGGTTGAGCCTCGTTAAGAAATAGACCCTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680235.1
CDS CAA 90 bp GAGATGCCTGCTCTGCTAATGGGCTGGACAAGATTAAAAGGAGTATaGTCAGCATTGAACTCTGTTTTGTCCTGCTTCTCCTTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: EMPALLMGWTRLKGV*SALNSVLSCFSFQH
Trigger: ATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGTCCAGCCCATTAGCAGAGCAGGCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS TCA 72 bp AGGTCAAGGCTGCAACAAGCTATGATCATGCCACTGTaGGCCAGCCTTAACAGTCTTATCTTCAAAAATTGC +
Preference number: 6 (lower is better)
Translates to: RSRLQQAMIMPL*ASLNSLIFKNC
Trigger: GCAATTTTTGAAGATAAGACTGTTAAGGCTGGCTCACAGTGGCATGATCATAGCTTGTTGCAGCCTTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680422.1
CDS CAA 72 bp GCTCTGCTAATGGGCTGGACAAGATTAAAAGGAGTATaGTCAGCATTGAACTCTGTTTTGTCCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: ALLMGWTRLKGV*SALNSVLSCFS
Trigger: GGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGTCCAGCCCATTAGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS CAA 90 bp CTTCCCAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTGCATaGTACCTGGACAGACTTCTATTAATTTGCACAGAAGTGACCAAC +
Preference number: 6 (lower is better)
Translates to: LPNHFQHPGVPLSFA*YLDRLLLICTEVTN
Trigger: GTTGGTCACTTCTGTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000416796.5
ENST00000474202.1
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS CAA 90 bp AGGACTTCCACATTATTGCCTCTCTCAAACAGCACATGTAAAGCTTaGCATCCAAGTTTCTGGACTTCATCATTGGCTGGAAATGAGTGC +
Preference number: 6 (lower is better)
Translates to: RTSTLLPLSNSTCKA*HPSFWTSSLAGNEC
Trigger: GCACTCATTTCCAGCCAATGATGAAGTCCAGAAACTTGGATGCAAAGCTTTACATGTGCTGTTTGAGAGAGGCAATAATGTGGAAGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416796.5
CDS CAA 72 bp GGTCAGACAAACTGTGCCATGATTTTACAAAGCCACTaGGGTTCCACAAAGTACAAGTCACTTAACTGCAGT +
Preference number: 6 (lower is better)
Translates to: GQTNCAMILQSH*GSTKYKSLNCS
Trigger: ACTGCAGTTAAGTGACTTGTACTTTGTGGAACCCAAGTGGCTTTGTAAAATCATGGCACAGTTTGTCTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680425.1
ENST00000680453.1
CDS CAA 90 bp GCTCTGCTAATGGGCTGGACAAGATTAAAAGGAGTATTGTCAGCATaGAACTCTGTTTTGTCCTGCTTCTCCTTTCAGCATGATTATCAG +
Preference number: 6 (lower is better)
Translates to: ALLMGWTRLKGVLSA*NSVLSCFSFQHDYQ
Trigger: CTGATAATCATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGTCCAGCCCATTAGCAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS TCA 72 bp TTGAATGGCACTCCTATTGAAAGAGTTATCCAGAGATaGCAGCTTCAAATAACCCTTGGCCATCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: LNGTPIERVIQR*QLQITLGHLHL
Trigger: GAGATGAAGATGGCCAAGGGTTATTTGAAGCTGTCATCTCTGGATAACTCTTTCAATAGGAGTGCCATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS TCA 72 bp TACAGCTTGTATCTTTGGGAGAGAGTGCCGGTCTTATaGTGTTTGAATGGCACTCCTATTGAAAGAGTTATC +
Preference number: 6 (lower is better)
Translates to: YSLYLWERVPVL*CLNGTPIERVI
Trigger: GATAACTCTTTCAATAGGAGTGCCATTCAAACATCATAAGACCGGCACTCTCTCCCAAAGATACAAGCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679360.1
CDS GCA 72 bp CAATCATTTCCAACATCCTGGGGTCCCATTAAGCTTTaGATTGTACCTGGACAGACTTCTATTAATTTGCAC +
Preference number: 6 (lower is better)
Translates to: QSFPTSWGPIKL*IVPGQTSINLH
Trigger: GTGCAAATTAATAGAAGTCTGTCCAGGTACAATGCAAAGCTTAATGGGACCCCAGGATGTTGGAAATGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298910.12
ENST00000343742.6
ENST00000416796.5
ENST00000474202.1
ENST00000644108.1
ENST00000679360.1
ENST00000680235.1
ENST00000680790.1
CDS CAA 72 bp ATGGGCTGGACAAGATTAAAAGGAGTATTGTCAGCATaGAACTCTGTTTTGTCCTGCTTCTCCTTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: MGWTRLKGVLSA*NSVLSCFSFQH
Trigger: ATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGTCCAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS CAA 90 bp GGCTGGACAAGATTAAAAGGAGTATTGTCAGCATTGAACTCTGTTTaGTCCTGCTTCTCCTTTCAGCATGATTATCAGTTAACTGACAGG +
Preference number: 6 (lower is better)
Translates to: GWTRLKGVLSALNSV*SCFSFQHDYQLTDR
Trigger: CCTGTCAGTTAACTGATAATCATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCTTGTCCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681136.1
CDS GCA 72 bp TGTATTTTAAAGAATTCCACAGGAGTAGCCTTGGATTaGAAACACAGTGTATCAAGGGAAGGTTGTCATGTG +
Preference number: 6 (lower is better)
Translates to: CILKNSTGVALD*KHSVSREGCHV
Trigger: CACATGACAACCTTCCCTTGATACACTGTGTTTGCAATCCAAGGCTACTCCTGTGGAATTCTTTAAAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474202.1
CDS CAA 72 bp CTGTATTTTAAAGAATTCCACAGGAGTAGCCTTGGATaGCAAACACAGTGTATCAAGGGAAGGTTGTCATGT +
Preference number: 6 (lower is better)
Translates to: LYFKEFHRSSLG*QTQCIKGRLSC
Trigger: ACATGACAACCTTCCCTTGATACACTGTGTTTGCAATCCAAGGCTACTCCTGTGGAATTCTTTAAAATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474202.1
CDS TCA 72 bp AGGCCATTTGTTTTACATATCTATCATACTTACTGGTaGACACCAAGGACTTCCCAATCATTTCCAACATCC +
Preference number: 6 (lower is better)
Translates to: RPFVLHIYHTYW*TPRTSQSFPTS
Trigger: GGATGTTGGAAATGATTGGGAAGTCCTTGGTGTTCACCAGTAAGTATGATAGATATGTAAAACAAATGGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474202.1
CDS CAA 90 bp ATCAAGGGAAGGTTGTCATGTGTACAAATAAATACTCAAGGCCATTaGTTTTACATATCTATCATACTTACTGGTGAACACCAAGGACTT +
Preference number: 6 (lower is better)
Translates to: IKGRLSCVQINTQGH*FYISIILTGEHQGL
Trigger: AAGTCCTTGGTGTTCACCAGTAAGTATGATAGATATGTAAAACAAATGGCCTTGAGTATTTATTTGTACACATGACAACCTTCCCTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474202.1
CDS CAA 72 bp AGATTAAAAGGAGTATTGTCAGCATTGAACTCTGTTTaGTCCTGCTTCTCCTTTCAGCATGATTATCAGTTA +
Preference number: 6 (lower is better)
Translates to: RLKGVLSALNSV*SCFSFQHDYQL
Trigger: TAACTGATAATCATGCTGAAAGGAGAAGCAGGACAAAACAGAGTTCAATGCTGACAATACTCCTTTTAATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681136.1