RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154237

Ensembl transcript IDs: ENST00000388948.8, ENST00000525284.5, ENST00000525395.2, ENST00000525617.2, ENST00000526457.3, ENST00000527698.1, ENST00000531270.5, ENST00000532029.6, ENST00000532145.1, ENST00000534045.5, ENST00000538064.1

Found 2262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATaGGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACC +
Preference number: 1 (lower is better)
Translates to: GPRLSRRPGRARTAP*VASRRSLWLSGRET
Trigger: GGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCG +
Preference number: 1 (lower is better)
Translates to: VCWAQAVSQTGQGTY*SMSGVPSLSVAVRA
Trigger: CGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp ACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCCGTGTCCAAGGGCCGCACGGGAAAC +
Preference number: 1 (lower is better)
Translates to: TSAMESPSGTFGLAV*LAAGGSVSKGRTGN
Trigger: GTTTCCCGTGCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp CAGAGCGGGTGGATGCTGATGCCGATGAGCGCCACGATGCAGGGGTaGTGCAGCGCGTGCAGCATGCTGGCCTCCTGCCGGAACTCGGAG +
Preference number: 1 (lower is better)
Translates to: QSGWMLMPMSATMQG*CSACSMLASCRNSE
Trigger: CTCCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATCAGCATCCACCCGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp TTGAGGCTGCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: LRLLSGASSRAKQSG*MLMPMSATMQGCCS
Trigger: GCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGCAGCCTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTG +
Preference number: 1 (lower is better)
Translates to: PPAAPEPGGCPWTAS*QSGAGGGPVQGAVL
Trigger: CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CCGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGTCCAAGGGCCGCACGGGAAACATGT +
Preference number: 1 (lower is better)
Translates to: PRWSPPQAPLGWPCG*LPGVPCPRAARETC
Trigger: ACATGTTTCCCGTGCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp TCCTTGATGTCGTTGTCGGGCGTCTGCTCCACCAGCTGCTCCAGCTaGCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGC +
Preference number: 1 (lower is better)
Translates to: SLMSLSGVCSTSCSS*LSVRYCTSSSRLRR
Trigger: GCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGACATCAAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp AGCGGGTGGATGCTGATGCCGATGAGCGCCACGATGCAGGGGTGCTaGAGCGCGTGCAGCATGCTGGCCTCCTGCCGGAACTCGGAGAAG +
Preference number: 1 (lower is better)
Translates to: SGWMLMPMSATMQGC*SACSMLASCRNSEK
Trigger: CTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATCAGCATCCACCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAAGGGCCGCACGGGAAACATGTCCCT +
Preference number: 1 (lower is better)
Translates to: DGVPLRHLWVGRVAG*RGFRVQGPHGKHVP
Trigger: AGGGACATGTTTCCCGTGCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTG +
Preference number: 1 (lower is better)
Translates to: PGCLADRAGHVLLHE*RPVALCGCQGGKPL
Trigger: CAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATaGCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCA +
Preference number: 1 (lower is better)
Translates to: VAGTALPPAAPEPGG*PWTASWQSGAGGGP
Trigger: TGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GTACATGATGCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGCTGCCGGGGGTTCCGTGTCCAAGGG +
Preference number: 1 (lower is better)
Translates to: VHDAHVRDGVPLRHL*VGRVAGCRGFRVQG
Trigger: CCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCATCATGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp TGTAGGGCTCCAGCCGCCTGCAGATCTCCAGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCATTGCTGTACCAGACCTCAGAGCCGC +
Preference number: 1 (lower is better)
Translates to: CRAPAACRSPGRHSR*QGGPAHCCTRPQSR
Trigger: GCGGCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGGCTGGAGCCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp TTAGTGTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGAC +
Preference number: 1 (lower is better)
Translates to: LVSQHSIMSACSRRN*TSSGCPRTGRMPLD
Trigger: GTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGACACTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GGTCGCTTCTCTGGCTTAGTGTCCCAGCACTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGG +
Preference number: 1 (lower is better)
Translates to: GRFSGLVSQHSIMSA*SRRNCTSSGCPRTG
Trigger: CCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGACACTAAGCCAGAGAAGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp TGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGACAGCAAC +
Preference number: 1 (lower is better)
Translates to: CPRTGRMPLDSFLAI*SWWWPSAGRCPDSN
Trigger: GTTGCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: GTALPPAAPEPGGCP*TASWQSGAGGGPVQ
Trigger: CTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp CAAGGAGGCCCGGCCCATTGCTGTACCAGACCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCACTGGGTAGGGGTTCTGCCGTGCGT +
Preference number: 1 (lower is better)
Translates to: QGGPAHCCTRPQSRC*PPPWPSLGRGSAVR
Trigger: ACGCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GGCCCTGCTTTGTTTGACCCAGCTCAGAACAGGATCCTGCACCCCTaGTCCTGCAAACTGATGGGGGAGGCCAGAGGAGGCCGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: GPALFDPAQNRILHP*SCKLMGEARGGRSQ
Trigger: CTGGGAGCGGCCTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGGGGTGCAGGATCCTGTTCTGAGCTGGGTCAAACAAAGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TGTTGGCTGTGTGTGAGCACAGGTAGGAGCAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACACAGCCACAAGCCCATCGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: CWLCVSTGRSSCPLG*PAPRETQPQAHRRG
Trigger: GCCTCGCCGATGGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCTACCTGTGCTCACACACAGCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CGTGCAGCATGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATaGCATCGGTGGCCCGCAGGTGCCTCAGCATGGTGTCTGCCGGTA +
Preference number: 1 (lower is better)
Translates to: RAACWPPAGTRRSSS*HRWPAGASAWCLPV
Trigger: TACCGGCAGACACCATGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCTGCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp TTGACCCAGCTCAGAACAGGATCCTGCACCCCTGCTCCTGCAAACTaGTGGGGGAGGCCAGAGGAGGCCGCTCCCAGCCTGATACCACTG +
Preference number: 1 (lower is better)
Translates to: LTQLRTGSCTPAPAN*WGRPEEAAPSLIPL
Trigger: CAGTGGTATCAGGCTGGGAGCGGCCTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGGGGTGCAGGATCCTGTTCTGAGCTGGGTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp AAACTGCCAGGAGCTTCCGCGGAGACCCCCACTTGCAATTCTGTGTaGACAGTCCCCTCCTTCAAGGCCGCAGCCACGCCAGGCTCTCCT +
Preference number: 1 (lower is better)
Translates to: KLPGASAETPTCNSV*TVPSFKAAATPGSP
Trigger: AGGAGAGCCTGGCGTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGCGGAAGCTCCTGGCAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp ATGCTGATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATG +
Preference number: 1 (lower is better)
Translates to: MLMPMSATMQGCCSA*SMLASCRNSEKFFM
Trigger: CATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp TGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCT +
Preference number: 1 (lower is better)
Translates to: CRCWLKVSPSMGVRS*SDLSEAAPGVCSMS
Trigger: AGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp AGGTTCCAGACCACCACGTACAGGGCCTTGTCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACG +
Preference number: 1 (lower is better)
Translates to: RFQTTTYRALSVKKH*LTVAMLAGPPMSQT
Trigger: CGTCTGGGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGTGGTCTGGAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GGCTGGGGACCCCGCAGAAGTACCGGGCACACAGCTGGTAGGTGGTaGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACC +
Preference number: 1 (lower is better)
Translates to: GWGPRRSTGHTAGRW*SGTSPRSWPCHPGT
Trigger: GGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTGTGTGCCCGGTACTTCTGCGGGGTCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp TTCTGGTCCTCGGTGGCTGTCCACAGGGATCTCTGGACCTGGAGCTaGCAGCTCACCTTCATCCCAGGGCAGCACATCCTCTGCACCTCC +
Preference number: 1 (lower is better)
Translates to: FWSSVAVHRDLWTWS*QLTFIPGQHILCTS
Trigger: GGAGGTGCAGAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGGACCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531270.5
3UTR TCA 90 bp CCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCTGGCCCAGGCCTCGGGGACTCAGGA +
Preference number: 1 (lower is better)
Translates to: PRAFPHGDLPEHRDI*SWLAQAGPGLGDSG
Trigger: TCCTGAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp ATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTCCGTGTaGTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGC +
Preference number: 1 (lower is better)
Translates to: MSKYCTSSDFSLGSV*WAQAVSQTGQGTYC
Trigger: GCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp ACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTaGTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCA +
Preference number: 1 (lower is better)
Translates to: TQMRSLTARIFTACR*WLKVSPSMGVRSCS
Trigger: TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCAGCCCCGGGCCAGCCAGCTCTGATG +
Preference number: 1 (lower is better)
Translates to: ENSICLLGPWRTRGR*QRGQAAAPGQPALM
Trigger: CATCAGAGCTGGCTGGCCCGGGGCTGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR CCA 90 bp TTCAAGGCCGCAGCCACGCCAGGCTCTCCTGTCCCTCCCACACAGTaGCTTGAACCCACAACAGGGTCTTTGCATGTGCAAGGCCCTTGC +
Preference number: 1 (lower is better)
Translates to: FKAAATPGSPVPPTQ*LEPTTGSLHVQGPC
Trigger: GCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGAGGGACAGGAGAGCCTGGCGTGGCTGCGGCCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp AGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTGGACCTGGAGCTaGCAGCTCACCTTCATCCCAGGGCAGCACATCCTCTGCACCTCC +
Preference number: 1 (lower is better)
Translates to: RLVSVAVHRDLWTWS*QLTFIPGQHILCTS
Trigger: GGAGGTGCAGAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 90 bp GGGCACACAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCCTCTGCCCT +
Preference number: 1 (lower is better)
Translates to: GHTAGRWWSGTSPRS*PCHPGTRRPPPLCP
Trigger: AGGGCAGAGGGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTGTGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp AGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAGAACTTGCTGGGGAGCTGGGGAGGC +
Preference number: 1 (lower is better)
Translates to: RQHRAYVACLSPRSR*RKAHWKNLLGSWGG
Trigger: GCCTCCCCAGCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGAC +
Preference number: 1 (lower is better)
Translates to: QMRSLTARIFTACRC*LKVSPSMGVRSCSD
Trigger: GTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp GCAGAGGGGTCAGGCTGCAGCCCCGGGCCAGCCAGCTCTGATGTGTaGCAGTCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCC +
Preference number: 1 (lower is better)
Translates to: AEGSGCSPGPASSDV*QSFHRNYLLLRVQA
Trigger: GGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTCACACATCAGAGCTGGCTGGCCCGGGGCTGCAGCCTGACCCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR TCA 90 bp GCCGATGGCAGAGGGGTCAGGCTGCAGCCCCGGGCCAGCCAGCTCTaGTGTGTGACAGTCATTCCACAGGAATTACCTTCTCTTGCGAGT +
Preference number: 1 (lower is better)
Translates to: ADGRGVRLQPRASQL*CVTVIPQELPSLAS
Trigger: ACTCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTCACACATCAGAGCTGGCTGGCCCGGGGCTGCAGCCTGACCCCTCTGCCATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR TCA 90 bp TGCGTCTTCATCCGCGATGCTGAACTTGGACCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCTGTCCTTTGGGGTGCCCCGCACCAC +
Preference number: 1 (lower is better)
Translates to: CVFIRDAELGPVGCV*AQVGAAVLWGAPHH
Trigger: GTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCTACCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp GGCGGGGTGGGGATGAGGAGTAGGAGGACATGGAGCAGTAGTCAGTaGGTGATTCCTGGTGGATCAGGATCTGCGTGCCCAGCTCCTCAC +
Preference number: 1 (lower is better)
Translates to: GGVGMRSRRTWSSSQ*VIPGGSGSACPAPH
Trigger: GTGAGGAGCTGGGCACGCAGATCCTGATCCACCAGGAATCACTCACTGACTACTGCTCCATGTCCTCCTACTCCTCATCCCCACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp CTCCTGTCCCTCCCACACAGTGGCTTGAACCCACAACAGGGTCTTTaGATGTGCAAGGCCCTTGCACCCAGTGCCCTCAGAGCTCCATGG +
Preference number: 1 (lower is better)
Translates to: LLSLPHSGLNPQQGL*MCKALAPSALRAPW
Trigger: CCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGAGGGACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp AGTGCTTCCCAGCGGAGGGCCTCTAGTGTAATTCCATCTGAGACCTaGGGATGGCAGGAAGGCCCGGCCCTGCTTTGTTTGACCCAGCTC +
Preference number: 1 (lower is better)
Translates to: SASQRRASSVIPSET*GWQEGPALLCLTQL
Trigger: GAGCTGGGTCAAACAAAGCAGGGCCGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAATTACACTAGAGGCCCTCCGCTGGGAAGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp CTGTCATTGGCGACGGGCAGGGCGATCTCAAACTTGGCCAGGAACTaGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACC +
Preference number: 1 (lower is better)
Translates to: LSLATGRAISNLARN*KYCSSVCCVKPVPT
Trigger: GGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCTGCCCGTCGCCAATGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGG +
Preference number: 1 (lower is better)
Translates to: HSLPCRSTAHPLISH*GPCAGPRLSRRPGR
Trigger: CCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp GGCAGCTCACCTTCATCCCAGGGCAGCACATCCTCTGCACCTCCATaGGGCCCTTCTCTGTGTTCACCACCGTGTAGTTCCTGGACTCCT +
Preference number: 1 (lower is better)
Translates to: GSSPSSQGSTSSAPP*GPSLCSPPCSSWTP
Trigger: AGGAGTCCAGGAACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp CCTTCACTGGGTAGGGGTTCTGCCGTGCGTCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTGTGTGTGAGCACAGGTAGGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PSLGRGSAVRLHPRC*TWTCWLCVSTGRSS
Trigger: GCTGCTCCTACCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCCCTACCCAGTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp ATTCCTGGTGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATaGTGCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTGGGT +
Preference number: 1 (lower is better)
Translates to: IPGGSGSACPAPHCT*CSRPRWSPPQAPLG
Trigger: ACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCACCAGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp TCCCTCCCACACAGTGGCTTGAACCCACAACAGGGTCTTTGCATGTaGAAGGCCCTTGCACCCAGTGCCCTCAGAGCTCCATGGAATGCC +
Preference number: 1 (lower is better)
Translates to: SLPHSGLNPQQGLCM*KALAPSALRAPWNA
Trigger: GGCATTCCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTaGACATCCTCTGATTTCTCACTGGGGTCCGTGTGCTGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: SRSMAVRTQSSMSKY*TSSDFSLGSVCWAQ
Trigger: CTGGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GCTGTTGACCACCTCCATGGCCTTCACTGGGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCTGAACTTGGACCTGTTGGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: AVDHLHGLHWVGVLP*VFIRDAELGPVGCV
Trigger: CACACAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAGGTGGTCAACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp TCCCAGCGGAGGGCCTCTAGTGTAATTCCATCTGAGACCTGGGGATaGCAGGAAGGCCCGGCCCTGCTTTGTTTGACCCAGCTCAGAACA +
Preference number: 1 (lower is better)
Translates to: SQRRASSVIPSETWG*QEGPALLCLTQLRT
Trigger: TGTTCTGAGCTGGGTCAAACAAAGCAGGGCCGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAATTACACTAGAGGCCCTCCGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp AGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCCAAGCTaGCCCAGGCCTCGGGGACTCAGGAGCCTGTGGAATGTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: RPSRTQRHLILACPS*PRPRGLRSLWNVLR
Trigger: TCTCAGCACATTCCACAGGCTCCTGAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp AAAGACAGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTGGACCTaGAGCTGGCAGCTCACCTTCATCCCAGGGCAGCACATCCTCTGC +
Preference number: 1 (lower is better)
Translates to: KDRLVSVAVHRDLWT*SWQLTFIPGQHILC
Trigger: GCAGAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCTGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 90 bp GTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGCGTCTTCATCCGCGATGCTGAACTT +
Preference number: 1 (lower is better)
Translates to: VPDLRAAVDHLHGLH*VGVLPCVFIRDAEL
Trigger: AAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp CCATTATCCCCAGACAGCGAGTGGGTCTGGGAGGGACTGAGCCCGTaGTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGCTTCGTT +
Preference number: 1 (lower is better)
Translates to: PLSPDSEWVWEGLSP*CGHKRSKDRGHSFV
Trigger: AACGAAGCTGTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGATAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp GTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACCACGGCGTTTGGGGCCTTGGCCTCG +
Preference number: 1 (lower is better)
Translates to: VAILSTRNLASIKSR*VPTTSTTAFGALAS
Trigger: CGAGGCCAAGGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GGCTTGCTGGCGGTGGCACTTAAAGGAACTCATTCATTCTCTGGATaGGGCAACACTCCTCACCCGGGATCCCCCAAGGGCTTTCCCACA +
Preference number: 1 (lower is better)
Translates to: GLLAVALKGTHSFSG*GNTPHPGSPKGFPT
Trigger: TGTGGGAAAGCCCTTGGGGGATCCCGGGTGAGGAGTGTTGCCCCATCCAGAGAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GGCCATCTAGGCATATACGTGCAAGTCACAGGGGATGCGATGGCTTaGCTTGGGCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: GHLGIYVQVTGDAMA*LGLRGLTHCAASCF
Trigger: AAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCACGTATATGCCTAGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GGAGTCAGCTCTCGGGCTTTTAAGACGGCAATGACTCGGCCCCGCTaGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAACATCTCCA +
Preference number: 1 (lower is better)
Translates to: GVSSRAFKTAMTRPR*APESFSRPMTITSP
Trigger: TGGAGATGTTATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAGCCCGAGAGCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp AGTTACTTCAGGCCATCTAGGCATATACGTGCAAGTCACAGGGGATaGGATGGCTTGGCTTGGGCTCAGAGGCCTGACGCACTGTGCTGC +
Preference number: 1 (lower is better)
Translates to: SYFRPSRHIRASHRG*DGLAWAQRPDALCC
Trigger: GCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCACGTATATGCCTAGATGGCCTGAAGTAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp CCAGCTCTGATGTGTGACAGTCATTCCACAGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGT +
Preference number: 1 (lower is better)
Translates to: PALMCDSHSTGITFS*ECKPPAGPAPRRTG
Trigger: ACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTCACACATCAGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR GCA 90 bp GCGATCTCAAACTTGGCCAGGAACTGGAAGTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCCACCAGCAGCATCCTGAGGTCTTCT +
Preference number: 1 (lower is better)
Translates to: AISNLARNWKYCSSV*CVKPVPTSSILRSS
Trigger: AGAAGACCTCAGGATGCTGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CTAAGCGGGTGCACTCGGACTGTGTGCCTCTGGGCTTGCTGGCGGTaGCACTTAAAGGAACTCATTCATTCTCTGGATGGGGCAACACTC +
Preference number: 1 (lower is better)
Translates to: LSGCTRTVCLWACWR*HLKELIHSLDGATL
Trigger: GAGTGTTGCCCCATCCAGAGAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCACCCGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp CCAGCACATAGGCACGCAGCGTTGCAATCCTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGTGCGTCCCGACCACCAGCACCACGG +
Preference number: 1 (lower is better)
Translates to: PAHRHAALQSFPHGT*LQLNPGASRPPAPR
Trigger: CCGTGGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp CAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCTGGCTTAGTG +
Preference number: 1 (lower is better)
Translates to: QHSSYMKVAKVGSFI*LTTDRASGRFSGLV
Trigger: CACTAAGCCAGAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp GTTGAAAAAGACAGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTCACCTTCATCCCAGGGCAGCACATC +
Preference number: 1 (lower is better)
Translates to: VEKDRLVSVAVHRDL*TWSWQLTFIPGQHI
Trigger: GATGTGCTGCCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCTGTCTTTTTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 90 bp CTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTaGATGGTGTTGGCTGTGGGGTGCCGCATACCGTGGGTGTCCAGG +
Preference number: 1 (lower is better)
Translates to: LCQKPTGTKLILNTL*MVLAVGCRIPWVSR
Trigger: CCTGGACACCCACGGTATGCGGCACCCCACAGCCAACACCATTCAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp CTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCACCATTCCATAGGAGAACATATCTAC +
Preference number: 1 (lower is better)
Translates to: LGNLELVVAQCRALS*QQLVEHHSIGEHIY
Trigger: GTAGATATGTTCTCCTATGGAATGGTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp GAACCCACAACAGGGTCTTTGCATGTGCAAGGCCCTTGCACCCAGTaGCCTCAGAGCTCCATGGAATGCCTTCTTCCCATTCCTCAGTCT +
Preference number: 1 (lower is better)
Translates to: EPTTGSLHVQGPCTQ*PQSSMECLLPIPQS
Trigger: AGACTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp ACTTCAGGCCATCTGGGCTTATATATGCGTGCAGGTCACAGGGGATaGGATGGCTTAGCTTGGGCTCAGAGGCCTGACATTCCTGCCTTC +
Preference number: 1 (lower is better)
Translates to: TSGHLGLYMRAGHRG*DGLAWAQRPDIPAF
Trigger: GAAGGCAGGAATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCGCATCCCCTGTGACCTGCACGCATATATAAGCCCAGATGGCCTGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp ATCTCAAACTTGGCCAGGAACTGGAAGTACTGCTCTTCCGTCTGCTaGGTGAAGCCAGTCCCCACCAGCAGCATCCTGAGGTCTTCTGCT +
Preference number: 1 (lower is better)
Translates to: ISNLARNWKYCSSVC*VKPVPTSSILRSSA
Trigger: AGCAGAAGACCTCAGGATGCTGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTGGCCAAGTTTGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 90 bp TCTAGGCATATACGTGCAAGTCACAGGGGATGCGATGGCTTGGCTTaGGCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAAC +
Preference number: 1 (lower is better)
Translates to: SRHIRASHRGCDGLA*AQRPDALCCKLLSN
Trigger: GTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCACGTATATGCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GGAGGAGGTTCTGGAGGAATGCCTGGCCGCTGCAGTTCAGGTGTTTaGAAGTTCTTGTGTGCTGGAGATGTGGCTGGGGTTTGTCTCACA +
Preference number: 1 (lower is better)
Translates to: GGGSGGMPGRCSSGV*KFLCAGDVAGVCLT
Trigger: TGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAACCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGTTCTaGAGGAATGCCTGGCCGCTGCAGTTCAGGTGTTTGGAAGTTCTT +
Preference number: 1 (lower is better)
Translates to: ARFLALVASSWGRRF*RNAWPLQFRCLEVL
Trigger: AAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAACCTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp AAGAGGCGGGCTAGCGGCTTGTACTATAGCACAGCCTGCCTTTGCTaGTGTGTGGCCATTAGGCCTGGTGGAACTGCCATCCATAAACCA +
Preference number: 1 (lower is better)
Translates to: KRRASGLYYSTACLC*CVAIRPGGTAIHKP
Trigger: TGGTTTATGGATGGCAGTTCCACCAGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGCCGCTAGCCCGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TCTAAGAGGCGGGCTAGCGGCTTGTACTATAGCACAGCCTGCCTTTaGTGGTGTGTGGCCATTAGGCCTGGTGGAACTGCCATCCATAAA +
Preference number: 1 (lower is better)
Translates to: SKRRASGLYYSTACL*WCVAIRPGGTAIHK
Trigger: TTTATGGATGGCAGTTCCACCAGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGCCGCTAGCCCGCCTCTTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp AACACCACGGTGTACTCCTGGCCCTGGGATGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGG +
Preference number: 1 (lower is better)
Translates to: NTTVYSWPWDEKKAV*FPQHSSYMKVAKVG
Trigger: CCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp CAAGGGACCACACCAGAATGTTGTCCGACTTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGTAGGCCAGGCCCGAGGCGATCTGGT +
Preference number: 1 (lower is better)
Translates to: QGTTPECCPTSGHRR*CFSCAGRPGPRRSG
Trigger: ACCAGATCGCCTCGGGCCTGGCCTACCTGCACAAGAAAAACATCATCTTCTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTCCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 90 bp GGGATGAGAAGAAGGCTGTCTGCTTCCCACAGCACAGTTCATACATaGAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACA +
Preference number: 1 (lower is better)
Translates to: GMRRRLSASHSTVHT*RWQKSGPSSGSPPT
Trigger: TGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp ACGTTCCTAGGCCAAGCCACGAATTGCCCAACTGGGTGGTCCGGCTaGCCTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACC +
Preference number: 1 (lower is better)
Translates to: TFLGQATNCPTGWSG*PAISLVCVLIVNST
Trigger: GGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCCTAGGAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp CTGATGTGTGACAGTCATTCCACAGGAATTACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAA +
Preference number: 1 (lower is better)
Translates to: LMCDSHSTGITFSCE*KPPAGPAPRRTGRK
Trigger: TTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTCACACATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR GCA 90 bp GATTCCACACTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTT +
Preference number: 1 (lower is better)
Translates to: DSTLQVHLRQADQHP*YKPLPEANGNEAHL
Trigger: AAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGTGTGGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531270.5
3UTR CCA 90 bp GACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTaGGATGAGAAGAAGGCTGTCTGCTTCCCACAGCACAGTTCATAC +
Preference number: 1 (lower is better)
Translates to: DSSFPSQNTTVYSWP*DEKKAVCFPQHSSY
Trigger: GTATGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp CTGCCTGCCTCTTTGACAGGCTGCAGAGGATGGCACTGTTGCATGTaGAGGAATTTTATGACCTCCCTCATGATAGAGGTTGGGGTTGCT +
Preference number: 1 (lower is better)
Translates to: LPASLTGCRGWHCCM*RNFMTSLMIEVGVA
Trigger: AGCAACCCCAACCTCTATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp CCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTaGATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGACTT +
Preference number: 1 (lower is better)
Translates to: PSLSLLVSCPPPSYH*MKALTRYQHYALGL
Trigger: AAGTCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
3UTR CCA 90 bp AGGACCAAGGCAGGCGTCCCTGCGTGGTCTGACACCTCTGAAACCTaGGTGAATAATCAGAGAGGTGTCCCTGCAATGATTAAACACCAA +
Preference number: 1 (lower is better)
Translates to: RTKAGVPAWSDTSET*VNNQRGVPAMIKHQ
Trigger: TTGGTGTTTAATCATTGCAGGGACACCTCTCTGATTATTCACCCAGGTTTCAGAGGTGTCAGACCACGCAGGGACGCCTGCCTTGGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp TGCAAGTCACAGGGGATGCGATGGCTTGGCTTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTA +
Preference number: 1 (lower is better)
Translates to: CKSQGMRWLGLGSEA*RTVLQAAFKQMHLL
Trigger: TAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TTAGTGCTGCCTGCCTCTTTGACAGGCTGCAGAGGATGGCACTGTTaGATGTGCAGGAATTTTATGACCTCCCTCATGATAGAGGTTGGG +
Preference number: 1 (lower is better)
Translates to: LVLPASLTGCRGWHC*MCRNFMTSLMIEVG
Trigger: CCCAACCTCTATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp AACATTCCAGTCCAGCAGTTAGTGCTGCCTGCCTCTTTGACAGGCTaGAGAGGATGGCACTGTTGCATGTGCAGGAATTTTATGACCTCC +
Preference number: 1 (lower is better)
Translates to: NIPVQQLVLPASLTG*RGWHCCMCRNFMTS
Trigger: GGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGCTGGACTGGAATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTT +
Preference number: 1 (lower is better)
Translates to: FKKLQVHLRQADQHP*YKPLPEANGNEAHL
Trigger: AAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 90 bp TCAAATGTAACGTTCCTAGGCCAAGCCACGAATTGCCCAACTGGGTaGTCCGGCTGCCCTGCTATCTCACTTGTTTGTGTGCTTATTGTC +
Preference number: 1 (lower is better)
Translates to: SNVTFLGQATNCPTG*SGCPAISLVCVLIV
Trigger: GACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCCTAGGAACGTTACATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GCCGCTGCAGTTCAGGTGTTTGGAAGTTCTTGTGTGCTGGAGATGTaGCTGGGGTTTGTCTCACAGTGGAGGCAAGGAATTGCAACTTTT +
Preference number: 1 (lower is better)
Translates to: AAAVQVFGSSCVLEM*LGFVSQWRQGIATF
Trigger: AAAAGTTGCAATTCCTTGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp AAGATTTGGGATGAGTTGCACTGGGAACAGAGACTAGGGAGGGACTaGTGTGTAAAAGAACGCCTGGACGTCAGGCACCTCAGACCATTT +
Preference number: 1 (lower is better)
Translates to: KIWDELHWEQRLGRD*CVKERLDVRHLRPF
Trigger: AAATGGTCTGAGGTGCCTGACGTCCAGGCGTTCTTTTACACATCAGTCCCTCCCTAGTCTCTGTTCCCAGTGCAACTCATCCCAAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp CAGCATCCTGAGGTCTTCTGCTCTGATCACCCCATTCTTGGCCACTaGCCGAGAGCCCTTAATATTAAAGATCCTCTGCAGACATTCGGA +
Preference number: 1 (lower is better)
Translates to: QHPEVFCSDHPILGH*PRALNIKDPLQTFG
Trigger: TCCGAATGTCTGCAGAGGATCTTTAATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 90 bp AGGGGATGCGATGGCTTGGCTTGGGCTCAGAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAACAAATGCATTTATTATATCTTGGAG +
Preference number: 1 (lower is better)
Translates to: RGCDGLAWAQRPDAL*CKLLSNKCIYYILE
Trigger: CTCCAAGATATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp TTATTATATCTTGGAGAACATTCCAGTCCAGCAGTTAGTGCTGCCTaGCTCTTTGACAGGCTGCAGAGGATGGCACTGTTGCATGTGCAG +
Preference number: 1 (lower is better)
Translates to: LLYLGEHSSPAVSAA*LFDRLQRMALLHVQ
Trigger: CTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGCTGGACTGGAATGTTCTCCAAGATATAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp GGATGCGATGGCTTGGCTTGGGCTCAGAGGCCTGACGCACTGTGCTaGAAGCTGCTTTCAAACAAATGCATTTATTATATCTTGGAGAAC +
Preference number: 1 (lower is better)
Translates to: GCDGLAWAQRPDALC*KLLSNKCIYYILEN
Trigger: GTTCTCCAAGATATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp ATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTaGGCTCCTAAAAGCAGAGATTCGGCCAGCGCAGGTAGCTCACAC +
Preference number: 1 (lower is better)
Translates to: ISLVCVLIVNSTYEE*APKSRDSASAGSSH
Trigger: GTGTGAGCTACCTGCGCTGGCCGAATCTCTGCTTTTAGGAGCTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp ATCAGACAGTATAGAGGTGGGAAGGCCAAACCGAGGAATTATGTTTaGCAGAAGGGAAGAAATGACCATGGTGGCCTTCTCAGACCCTGT +
Preference number: 1 (lower is better)
Translates to: IRQYRGGKAKPRNYV*QKGRNDHGGLLRPC
Trigger: ACAGGGTCTGAGAAGGCCACCATGGTCATTTCTTCCCTTCTGTCAAACATAATTCCTCGGTTTGGCCTTCCCACCTCTATACTGTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp ATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCTATGGGTCTTaGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATGGA +
Preference number: 1 (lower is better)
Translates to: IPMRMHLDLGIPYGS*KVTWIDTFWWVVYG
Trigger: TCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 90 bp GTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAGGCCCTTTCTGAAGTCCTGCTGATT +
Preference number: 1 (lower is better)
Translates to: VQTNRACAPAASKFT*QSYKHKALSEVLLI
Trigger: AATCAGCAGGACTTCAGAAAGGGCCTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp TTTGAAATTGGTGAGATGTTTCTTGGGCTGGTTGGTCTGAGGACTTaGGGTTGTAGGTGGATCTTTCTCATGGACCAAAGAGCAGGAGGA +
Preference number: 1 (lower is better)
Translates to: FEIGEMFLGLVGLRT*GCRWIFLMDQRAGG
Trigger: TCCTCCTGCTCTTTGGTCCATGAGAAAGATCCACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAAGAAACATCTCACCAATTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 90 bp GCTAAAACAGTAAGGTCAAGTTGTTTGGACAGAAGGTCTACAGGGTaGGGTCCTGGCTCTTGTGTAAGAATTCTGACTGCACTAACCATG +
Preference number: 1 (lower is better)
Translates to: AKTVRSSCLDRRSTG*GPGSCVRILTALTM
Trigger: CATGGTTAGTGCAGTCAGAATTCTTACACAAGAGCCAGGACCGCACCCTGTAGACCTTCTGTCCAAACAACTTGACCTTACTGTTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp CTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTaGCACGTTCTGGTGGGTTGTTTATGGATTTCTGCTCTTTGTAGA +
Preference number: 1 (lower is better)
Translates to: LGLGDPLWVLESYMD*HVLVGCLWISALCR
Trigger: TCTACAAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATaGATTTATTATATCTTGGAGAACATTCCAGTCCAGCAGTTAGTG +
Preference number: 1 (lower is better)
Translates to: AQRPDALCCKLLSNK*IYYILENIPVQQLV
Trigger: CACTAACTGCTGGACTGGAATGTTCTCCAAGATATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp ATGCACTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATaGATTGACACGTTCTGGTGGGTTGTTTATGGATTTCTGCTCTTT +
Preference number: 1 (lower is better)
Translates to: MHLDLGIPYGSWKVT*IDTFWWVVYGFLLF
Trigger: AAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 90 bp TTACTGGATTTGAAATTGGTGAGATGTTTCTTGGGCTGGTTGGTCTaGGGACTTGAGGTTGTAGGTGGATCTTTCTCATGGACCAAAGAG +
Preference number: 1 (lower is better)
Translates to: LLDLKLVRCFLGWLV*GLEVVGGSFSWTKE
Trigger: CTCTTTGGTCCATGAGAAAGATCCACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAAGAAACATCTCACCAATTTCAAATCCAGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 90 bp GAATGTCATCAGTTAAGGTGGGGCAGGGCATATTCACTTCTTTTGTaGTTCTTCAGTTACTTCAGGCCATCTGGGCTTATATATGCGTGC +
Preference number: 1 (lower is better)
Translates to: ECHQLRWGRAYSLLL*FFSYFRPSGLIYAC
Trigger: GCACGCATATATAAGCCCAGATGGCCTGAAGTAACTGAAGAATCACAAAAGAAGTGAATATGCCCTGCCCCACCTTAACTGATGACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp CGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTaGGTTTTTATATTTGATGAAAAAGAGCCTAAACGCTATCTGATT +
Preference number: 1 (lower is better)
Translates to: RKVSQGCCQTRHELG*VFIFDEKEPKRYLI
Trigger: AATCAGATAGCGTTTAGGCTCTTTTTCATCAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp GGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTaGTGGGTTGTTTATGGATTTCTGCTCTTTGTAGAAACGTTGAAA +
Preference number: 1 (lower is better)
Translates to: GIPYGSWKVTWIDTF*WVVYGFLLFVETLK
Trigger: TTTCAACGTTTCTACAAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 90 bp CCCATGCCCTTAACCTGTTTGCCTTTCCGGTTTTCTGTTTCTTATTaGCATTACGAACTCTCTGTAATGAAGATAAGTGAGGTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: PMPLTCLPFRFSVSY*HYELSVMKISEVFV
Trigger: GACAAAGACCTCACTTATCTTCATTACAGAGAGTTCGTAATGTCAATAAGAAACAGAAAACCGGAAAGGCAAACAGGTTAAGGGCATGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 90 bp ATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTaGGTTGTTTATGGATTTCTGCTCTTTGTAGAAACGTTGAAAAAG +
Preference number: 1 (lower is better)
Translates to: IPYGSWKVTWIDTFW*VVYGFLLFVETLKK
Trigger: CTTTTTCAACGTTTCTACAAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 90 bp AAAGTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTaGGGTCAAGCGGCATTGCAGAAGAAAATAAGGCATTTAGGTTTT +
Preference number: 1 (lower is better)
Translates to: KVLFSGYLELLLSLY*GQAALQKKIRHLGF
Trigger: AAAACCTAAATGCCTTATTTTCTTCTGCAATGCCGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRAALLL*QHGLLQ
Trigger: CTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGC...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTCGGCTGCGGCGCTGCTaGTCTGCCAGCACGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PPADLQGGTVDDKEARPIRLRRC*SASTAS
Trigger: GGAGGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCG...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGTCCCGGCTGCGGCGCTaGTGCTCTGCCAGCACGGCC +
Preference number: 2 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQSRLRR*CSASTA
Trigger: GGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGA...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCCGTCGTCGTCCCGGCTaGGGCGCTGCTGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPRRRPG*GAAALP
Trigger: TGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACG...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp ATGATGCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCCGGGGGTTCCGTGTCCAAGGGCCGC +
Preference number: 2 (lower is better)
Translates to: MMLTSAMESPSGTFG*AVWLAAGGSVSKGR
Trigger: GCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCATCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: RLGTQMRSLTARIFTACRAALLL*QHGLLQ
Trigger: CTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGC...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCG +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLGQGTY*SMSGVP
Trigger: CGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGCCACGATGCAGGGGTaGTGCAGCGCGTGCAGCATG +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLATMQG*CSACSM
Trigger: CATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCGGCTCAGGTAGCTCCTaGGGATCAGCCGCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: DADERHDAGVLQRVQHAGGSGSS*GSAALP
Trigger: TGGCAGGGCGGCTGATCCCCAGGAGCTACCTGAGCC...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCGCGCGTGCAGCATGCTaGCCTCCTGCCGGAACTCGG +
Preference number: 2 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPARAAC*PPAGTR
Trigger: CCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGC...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp TCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: SSGCPRTGRMPLDSF*AIWSWWWPSAGRCP
Trigger: AGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTCCCCAGACAGCGAGTaGGTCTGGGAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSPDSE*VWEGLS
Trigger: GCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGGAATGGTGTTGGCTGTaGGGTGCCGCATACCGTGGG +
Preference number: 2 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCREWCWL*GAAYRG
Trigger: CCCACGGTATGCGGCACCCCACAGCCAACACCATTC...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGT +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLIWSWW*PSAGRC
Trigger: ACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGAT...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACGGAGCAGCTGTCCTTTaGGGTGCCCCGCACCACGGG +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHGAAVL*GAPHHG
Trigger: CCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGTGGGGCACTGGAATaGGAGGAGAGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCGALE*EERESG
Trigger: CCCACTCTCCCTCTCCTCTCATTCCAGTGCCCCACA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATAGCCCCCATCAAAAGTaGCCAGGAGCCCTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHSPHQK*PGALPA
Trigger: GGCAGGAAGGGCTCCTGGTCACTTTTGATGGGGGCT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR TCA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTTGCTCTTCCGTCTGCTaGGTGAAGCCAGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRCSSVC*VKPVPT
Trigger: GGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCA...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCACGATGCAGGGGTGCTaGAGCGCGTGCAGCATGCTG +
Preference number: 2 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPTMQGC*SACSML
Trigger: CAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGT...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: DADERHDAGVLQRVQHAGKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCAGGTTCCTCAGGCCGTaGCTGGTGTCCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: DADERHDAGVLQRVQHAGRFLRP*LVSGKW
Trigger: CCATTTCCCGGACACCAGCCACGGCCTGAGGAACCT...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATGGGTGCCGCATACCGTaGGTGTCCAGGCCAGGTTTA +
Preference number: 2 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHGCRIP*VSRPGL
Trigger: TAAACCTGGCCTGGACACCCACGGTATGCGGCACCC...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCATTGACGGCCACAGGCTaGCCCTGGTACCGGGCCCGG +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPLTATG*PWYRAR
Trigger: CCGGGCCCGGTACCAGGGCCAGCCTGTGGCCGTCAA...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp GCCTCCTCCCCCAGCGCCAGGTTCCAGACCACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGT +
Preference number: 2 (lower is better)
Translates to: ASSPSARFQTTTYRA*SVKKHWLTVAMLAG
Trigger: ACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGTGGTCTGGAACCTGGCGCTGGGGGAGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp CGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: RNCTSSGCPRTGRMP*DSFLAIWSWWWPSA
Trigger: TGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTCCAAGCCTGTGACTaGCAGAGCAGCGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGFQACD*QSSVST
Trigger: GGTGGAGACGCTGCTCTGTCAGTCACAGGCTTGGAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGTGGGGGAGCTTTTTaGGCCAGGATGAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSGGAF*ARMSQE
Trigger: CTCCTGGCTCATCCTGGCTCAAAAAGCTCCCCCACT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCACCGGGCCCGGTAGATaGCGGTGCCACTGCCGCCCT +
Preference number: 2 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPTGPGR*RCHCRP
Trigger: AGGGCGGCAGTGGCACCGTCATCTACCGGGCCCGGT...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGTGTGCCTCTGGGCTTaGTGGCGGTGGCACTTAAAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGVCLWA*WRWHLK
Trigger: CTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACAC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTGGAGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: PGAGGGAAECQHIGTQRCHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...GCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCGGCAGCCGATGGTGCTaGCCACGTCCTTCATGCTGC +
Preference number: 2 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPGSRWC*PRPSCC
Trigger: GCAGCATGAAGGACGTGGGCAGCACCATCGGCTGCC...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGGGATCAGCCGCCCTaGCAGTCGCTGGCAGCCGAT +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGDQPP*QSLAAD
Trigger: ATCGGCTGCCAGCGACTGGCAGGGCGGCTGATCCCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAA +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGRVAG*RGFRVQ
Trigger: TTGGACACGGAACCCCCGGCAGCCAGCCACACGGCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGACAGCGAGTGGGTCTaGGAGGGACTGAGCCCGTGC +
Preference number: 2 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYDSEWV*EGLSPC
Trigger: GCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGCGCCCTGCCAGTCGCTaGCAGCCGATGGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: QELEVLLFRLLREASPHQRPASR*QPMVLP
Trigger: GGGCAGCACCATCGGCTGCCAGCGACTGGCAGGGCG...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTCCCGTCGCTCTCTGTaGCTGTCAGGGCGGGAAACC +
Preference number: 2 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSRRSL*LSGRET
Trigger: GGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: LGTQMRSLTARIFTACRCAIWSW*WPSAGR
Trigger: GCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGC...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGTGGGGAAATGGGGTaGACGTCAGGTGGATCAGAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCGEMG*TSGGSE
Trigger: CTCTGATCCACCTGACGTTCACCCCATTTCCCCACA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATACCCAGCACTCCATCATaGGCGCCTGCAGTCGCCGGA +
Preference number: 2 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIPSTPS*APAVAG
Trigger: TCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGG...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCAT +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGRHSR*QGGPAH
Trigger: ATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGCACAGCCTGCCTTTaGTGGTGTGTGGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSTACL*WCVAIR
Trigger: CCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAGGGGGAGCGGCAGAGTaGCAGCACATAGGCACGCAG +
Preference number: 2 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIGGAAE*QHIGTQ
Trigger: CTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCC...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCTCCCGGCTGCGGCGCTaGTGCTCTGCCAGCACGGCC +
Preference number: 2 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGSRLRR*CSASTA
Trigger: GGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGA...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGCAGCGCGTGCAGCATaGTGGCCTCCTGCCGGAACT +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPAARAA*WPPAGT
Trigger: AGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPGCCSA*SMLASC
Trigger: GCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTTGGCTTGCCCAAGCTaGCCCAGGCCTCGGGGACTC +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHLACPS*PRPRGL
Trigger: GAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTGGCTTGCCCAAGCTaGCCCAGGCCTCGGGGACTC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELACPS*PRPRGL
Trigger: GAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGCTGCAGGCATTCCTTaGCCTGGTGGCCAGATTTCT +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGAAGIP*PGGQIS
Trigger: AGAAATCTGGCCACCAGGCCAAGGAATGCCTGCAGC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCGGAAGCCTGTGGCCCTaGAGCCGGAGGGGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSGSLWP*SRRGSG
Trigger: GCCGCTCCCCCTCCGGCTCCAGGGCCACAGGCTTCC...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGGGAGGTAGCTGTCATTaGCGACGGGCAGGGCGATCT +
Preference number: 2 (lower is better)
Translates to: RLGTQMRSLTARIFTACRGGSCH*RRAGRS
Trigger: AGATCGCCCTGCCCGTCGCCAATGACAGCTACCTCC...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGCAGGCCAGGTTTAGATaGAAGGAGATGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLQARFR*KEMGQE
Trigger: CTCCTGCCCCATCTCCTTCCATCTAAACCTGGCCTG...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: VPALHHERLQSPELHFLRPLISH*GPCAGP
Trigger: GGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGG...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGTGCCACTGCCGCCCTaGCCCAGGACGCTGCCCTCG +
Preference number: 2 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQVPLPP*PRTLPS
Trigger: CGAGGGCAGCGTCCTGGGCCAGGGCGGCAGTGGCAC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHSSWHR*PAGASA
Trigger: TGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGA...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACGCGCGTGCAGCATGCTaGCCTCCTGCCGGAACTCGG +
Preference number: 2 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHARAAC*PPAGTR
Trigger: CCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGC...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGC +
Preference number: 2 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPLHGLH*VGVLPC
Trigger: GCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAG...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTGTGAGTGATTCCTGGTaGATCAGGATCTGCGTGCCC +
Preference number: 2 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRVSDSW*IRICVP
Trigger: GGGCACGCAGATCCTGATCCACCAGGAATCACTCAC...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp AGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTaGAGGCTGCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGG +
Preference number: 2 (lower is better)
Translates to: RGIKEESLAFSDSTV*RLLSGASSRAKQSG
Trigger: CCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGCAGCCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp CAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCC +
Preference number: 2 (lower is better)
Translates to: QISREAQSMTRRPGP*LYQTSEPLLTTSMA
Trigger: GGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTCCGGGAAGTCGGTCATaGACAGTTCAGGGACCAGCT +
Preference number: 2 (lower is better)
Translates to: PPADLQGGTVDDKEARPIPGSRS*TVQGPA
Trigger: AGCTGGTCCCTGAACTGTTCATGACCGACTTCCCGG...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACGGCGCCCTCATGGAATaGCTGCCTCGAAATCCCGTA +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHGALME*LPRNPV
Trigger: TACGGGATTTCGAGGCAGTCATTCCATGAGGGCGCC...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTGCCCTACCTCAAGTaGTTCCCAGCGGAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELPYLK*FPAEGL
Trigger: GAGGCCCTCCGCTGGGAAGCACTTGAGGTAGGGCAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTCGTCGTCGTCCCGGCTaGGGCGCTGCTGCTCTGCCA +
Preference number: 2 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSRRRPG*GAAALP
Trigger: TGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACG...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCCTGTCCGTCAGGTACTaGACGTCGTCGTCCCGGCTG +
Preference number: 2 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLLSVRY*TSSSRL
Trigger: CAGCCGGGACGACGACGTGCAGTACCTGACGGACAG...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCGTTGTCGGGCGTCTaGTCCACCAGCTGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSLSGV*STSCSS
Trigger: GCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCG +
Preference number: 2 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAGQGTY*SMSGVP
Trigger: CGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCC...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACTCGGTGGCCCGCAGGTaGCTCAGCATGGTGTCTGCC +
Preference number: 2 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHSVARR*LSMVSA
Trigger: GGCAGACACCATGCTGAGGCACCTGCGGGCCACCGA...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCAGCATGCTGGCCTCCTaGCGGAACTCGGAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSMLAS*RNSEKF
Trigger: GAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCT...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 2 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGGAGGCCCGGCCCATTaGTGTACCAGACCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQGGPAH*CTRPQS
Trigger: GCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAGACCCTCAGCCCCCTaGGACTTGGTGCCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRPSAP*DLVPRL
Trigger: CAACCTGGGCACCAAGTCCCAGGGGGCTGAGGGTCT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGTCGCTGGCAGCCGATaGTGCTGCCCACGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWVAGSR*CCPRPS
Trigger: TGAAGGACGTGGGCAGCACCATCGGCTGCCAGCGAC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGCTGGTGTCCGGGAAATaGAGCAGGGTGCCGGTTTCT +
Preference number: 2 (lower is better)
Translates to: VPALHHERLQSPELHFLRLVSGK*SRVPVS
Trigger: AGAAACCGGCACCCTGCTCCATTTCCCGGACACCAG...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGAATGGTGTTGGCTGTaGGGTGCCGCATACCGTGGG +
Preference number: 2 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLEWCWL*GAAYRG
Trigger: CCCACGGTATGCGGCACCCCACAGCCAACACCATTC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHVLLHE*RPVALC
Trigger: ACAGAGAGCGACGGGACGCCACTCATGGAGCAGTAC...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGC +
Preference number: 2 (lower is better)
Translates to: LGTQMRSLTARIFTACRCAKQSG*MLMPMS
Trigger: GCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGT +
Preference number: 2 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPIWSWW*PSAGRC
Trigger: ACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGAT...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 2 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp TTCCAGACCACCACGTACAGGGCCTTGTCCGTGAAGAAGCACTGGTaGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTTG +
Preference number: 2 (lower is better)
Translates to: FQTTTYRALSVKKHW*TVAMLAGPPMSQTL
Trigger: CAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGTGGTCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCCTGCTCCTGCAAACTaGTGGGGGAGGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHPAPAN*WGRPEE
Trigger: CTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGTGTGGCGCCAAGATTaGAAGGAGAAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGVWRQD*KEKEVE
Trigger: CTCAACCTCTTTCTCCTTTCAATCTTGGCGCCACAC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGAGGAAGCTGATGGCTaGCTGCAGGTCCTCGTAGTC +
Preference number: 2 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPAEEADG*LQVLVV
Trigger: GACTACGAGGACCTGCAGTCAGCCATCAGCTTCCTC...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGGCCTGTGCTCCAGCTaGGTCCAAATTTACTTGACA +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGGLCSS*VQIYLT
Trigger: TGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGCTCTGGGAGTGGCTaGCAGGTGAGTTGGACAGTC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGSGSG*QVSWTV
Trigger: GACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 2 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCTCGTTGTCGGGCGTCTaGTCCACCAGCTGCTCCAGC +
Preference number: 2 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPSLSGV*STSCSS
Trigger: GCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGA...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTCAGCAGTTGGGGGATaGGGTATTCAGAGAACTCTG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSAVGG*GIQRTL
Trigger: CAGAGTTCTCTGAATACCCCATCCCCCAACTGCTGA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGCATGTTGGCACAGTaGGCAAGGAGGGGCTGCCCA +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHCMLAQ*ARRGCP
Trigger: TGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGCCTGCAAAGCAGCCTaGCCTCGCGTGATGCCAAAG +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHACKAA*PRVMPK
Trigger: CTTTGGCATCACGCGAGGCCAGGCTGCTTTGCAGGC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACT +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLGRSQT*PGTGST
Trigger: AGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCCCCTCTGAATGGTGTTaGCTGTGGGGTGCCGCATAC +
Preference number: 2 (lower is better)
Translates to: LGTQMRSLTARIFTACRCPSEWC*LWGAAY
Trigger: GTATGCGGCACCCCACAGCCAACACCATTCAGAGGG...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCA +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGSSWHR*PAGASA
Trigger: TGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGA...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAG +
Preference number: 2 (lower is better)
Translates to: PPADLQGGTVDDKEARPITTVYS*PWDEKK
Trigger: CTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGT...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCATGAGGGTGGTAAGTaGCATCTATCTGAGATGCCT +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGHEGGK*HLSEMP
Trigger: AGGCATCTCAGATAGATGTCACTTACCACCCTCATG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAAGCCGGACCGGGTGTaGGGAGGGGAGGTGATAAAA +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEKPDRV*GGEVIK
Trigger: TTTTATCACCTCCCCTCCTCACACCCGGTCCGGCTT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGGGAAACAGGCCCTTaGAAAGAAGGTAATGTGGAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGRETGP*KEGNVE
Trigger: CTCCACATTACCTTCTTTTCAAGGGCCTGTTTCCCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAGGTCCTCGTAGTCCTTaGTGTCGTTGTCGGGCGTCT +
Preference number: 2 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIGPRSP*CRCRAS
Trigger: AGACGCCCGACAACGACATCAAGGACTACGAGGACC...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCACCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPPVGCV*AQVGAA
Trigger: AGCTGCTCCTACCTGTGCTCACACACAGCCAACAGG...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGCCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCT +
Preference number: 2 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQPVGCV*AQVGAA
Trigger: AGCTGCTCCTACCTGTGCTCACACACAGCCAACAGG...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCATACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCC +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPYCSSV*CVKPVP
Trigger: GGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTA...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCAGGAACTGGAAGTACTaGTCTTCCGTCTGCTGCGTG +
Preference number: 2 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPRNWKY*SSVCCV
Trigger: CACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCT...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACA +
Preference number: 2 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPSCPLG*PAPRET
Trigger: TGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCT...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCGGACTGTGTGCCTCTaGGCTTGCTGGCGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRTVCL*ACWRWH
Trigger: GTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCGGACTGTGTGCCTCTaGGCTTGCTGGCGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFRTVCL*ACWRWH
Trigger: GTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTCCTGCCTTGGCTCCTaGGTAGCTGGGACTTTAGGC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEESCLGS*VAGTLG
Trigger: GCCTAAAGTCCCAGCTACCCAGGAGCCAAGGCAGGA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGACACAAAGGAGGCTTTaGATTGGGAAGAAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGTQRRL*IGKKGS
Trigger: ACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGCAGCACCACGGCGTTTaGGGCCTTGGCCTCGATGTT +
Preference number: 2 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAQHHGV*GLGLDV
Trigger: AACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTG...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTGGAAGCCTGTGGCCCTaGAGCCGGAGGGGGAGCGGC +
Preference number: 2 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLGSLWP*SRRGSG
Trigger: GCCGCTCCCCCTCCGGCTCCAGGGCCACAGGCTTCC...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGGGCTCAGGTAGCTCCTaGGGATCAGCCGCCCTGCCA +
Preference number: 2 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRGSGSS*GSAALP
Trigger: TGGCAGGGCGGCTGATCCCCAGGAGCTACCTGAGCC...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCAGGTTCCTCAGGCCGTaGCTGGTGTCCGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVRFLRP*LVSGKW
Trigger: CCATTTCCCGGACACCAGCCACGGCCTGAGGAACCT...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHPWTAS*QSGAGG
Trigger: ACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGG...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGCAGCGGTCGCTTCTCTaGCTTAGTGTCCCAGCACTC +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGQRSLL*LSVPAL
Trigger: GAGTGCTGGGACACTAAGCCAGAGAAGCGACCGCTG...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp TCTCCTGTCCCTCCCACACAGTGGCTTGAACCCACAACAGGGTCTTaGCATGTGCAAGGCCCTTGCACCCAGTGCCCTCAGAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: SPVPPTQWLEPTTGS*HVQGPCTQCPQSSM
Trigger: CATGGAGCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGAGGGACAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCCTGCTCCTGCAAACTaGTGGGGGAGGCCAGAGGAG +
Preference number: 2 (lower is better)
Translates to: GFPTRRPSRTQRHLILACPAPAN*WGRPEE
Trigger: CTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGGCGGAGGTGGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFRRRWQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCCACCTCCGCCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGCAGGATGGAAAAATTaGAAGTGCTGTTTTCCGGCT +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGAGWKN*KCCFPA
Trigger: AGCCGGAAAACAGCACTTTCAATTTTTCCATCCTGC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGACAGGCCTGAATTCTaGGAAGGGAAAGTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGDRPEF*EGKVVK
Trigger: TTTTACCACTTTCCCTTCTCAGAATTCAGGCCTGTC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCCCATTCTTGGCCACTaGCCGAGAGCCCTTAATATT +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHPILGH*PRALNI
Trigger: AATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGG...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGCTTCCGTCTGCTGCGTaGAGCCAGTCCCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQLPSAA*SQSPPA
Trigger: TGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAG...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 2 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHRGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGAGAGCTGCACACGACTaGCGTAACCATGGAGGGGGC +
Preference number: 2 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMRAAHD*RNHGGG
Trigger: GCCCCCTCCATGGTTACGTCAGTCGTGTGCAGCTCT...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGTGAATTTTGGTGCCTaGAAAGCAGCCTGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEVNFGA*KAAWPR
Trigger: GCGAGGCCAGGCTGCTTTGCAGGCACCAAAATTCAC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGGCTTTAAAAGGCCATaGTGTAGCAGGAGAGTGATA +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGGFKRP*CSRRVI
Trigger: TATCACTCTCCTGCTACAGCATGGCCTTTTAAAGCC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCGTCTGCTCCACCAGCTaGTCCAGCTGCCTGTCCGTC +
Preference number: 2 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGVCSTS*SSCLSV
Trigger: GACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGAC...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTGTCTGCTCCACCAGCTaGTCCAGCTGCCTGTCCGTC +
Preference number: 2 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVVCSTS*SSCLSV
Trigger: GACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGAC...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACCGCTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHRCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCG...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: QELEVLLFRLLREASPHQRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCCCCAGACAGCGAGTaGGTCTGGGAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSPDSE*VWEGLS
Trigger: GCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGGCCACCTGCATGTTaGCACAGTGGGCAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGPPAC*HSGQGG
Trigger: CCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGGAC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGQGLWE*LPGELD
Trigger: GTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGT +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVVLLHE*RPVALC
Trigger: ACAGAGAGCGACGGGACGCCACTCATGGAGCAGTAC...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGC +
Preference number: 2 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLAKQSG*MLMPMS
Trigger: GCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLSFLAI*SWWWPS
Trigger: ACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCT...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCGTATCCAAGGCCTGTTaGGGTGTGTTTAAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: LGTQMRSLTARIFTACRCVSKAC*GVFKGH
Trigger: GTGCCCCTTAAACACACCCCAACAGGCCTTGGATAC...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGCCTGTGGAATGTGCTaGGAGCCTGAGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: GFPTRRPSRTQRHLILACACGMC*EPEVSG
Trigger: GCCAGAGACCTCAGGCTCTCAGCACATTCCACAGGC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTCCCACACAGTGGCTTaGACCCACAACAGGGTCTTT +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHSHTVA*THNRVF
Trigger: AAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCTCCTGGCCCTGGGATaGGAAGAAGGCTGTCTGCTT +
Preference number: 2 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMLLALG*EEGCLL
Trigger: AAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGGGCAAGGAGGGGCTaGCCATTATCCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGWARRG*PLSPDS
Trigger: GCTGTCTGGGGATAATGGGCAGCCCCTCCTTGCCCA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCCACCCATGGAAGCTaGTCAGGGGCCACCTGCATG +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSTHGS*SGATCM
Trigger: CATGCAGGTGGCCCCTGAGCAGCTTCCATGGGTGGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCAGGGACCATGCTGAATaGTGGGCCCATCCCAGCAAC +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSRDHAE*WAHPSN
Trigger: GTTGCTGGGATGGGCCCAGCATTCAGCATGGTCCCT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTGGTTACCACCCTCTaGCAACATGAGGGTGGTAAG +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELVTTL*QHEGGK
Trigger: CTTACCACCCTCATGTTGGCAGAGGGTGGTAACCAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGCCCTTGCACCCAGTaGCCTCAGAGCTCCATGGAA +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGPCTQ*PQSSME
Trigger: TTCCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGCAAGTCACAGGGGATaGGATGGCTTGGCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSASHRG*DGLAWA
Trigger: AGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGGAAAGGGGTCGGGGTaGAGAGATACGAGGTCGGGA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFGKGSG*RDTRSG
Trigger: TCCCGACCTCGTATCTCTGCACCCCGACCCCTTTCC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACC +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGSIKSR*VPTTST
Trigger: GGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGA...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATATCAATTAAATCCAGGTaGGTCCCGACCACCAGCACC +
Preference number: 2 (lower is better)
Translates to: AMTRPRWAPESFSRPMTISIKSR*VPTTST
Trigger: GGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGA...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGCATCCTGAGGTCTTCTaGTCTGATCACCCCATTCTT +
Preference number: 2 (lower is better)
Translates to: VPALHHERLQSPELHFLRHPEVF*SDHPIL
Trigger: AAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATG...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTGTCTTCTAGGTCCTTaGAGAACTAGAGGCCGATGG +
Preference number: 2 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYCLLGP*RTRGRW
Trigger: CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 2 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTGCGATGGCTTGGCTTaGGCTCAGAGGCCTGACGCA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFCDGLA*AQRPDA
Trigger: TGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGACAGAGATAAGAGGTTaGGGCACAGAAATAAGGGAT +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGTEIRG*GTEIRD
Trigger: ATCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCATTCCTTGGCCTGGTaGCCAGATTTCTGGCACTTG +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEHSLAW*PDFWHL
Trigger: CAAGTGCCAGAAATCTGGCCACCAGGCCAAGGAATG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCCACCAGCACCCGTGTaGGGCTCGGTAGTCAAAGTG +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFPPAPV*GSVVKV
Trigger: CACTTTGACTACCGAGCCCCACACGGGTGCTGGTGG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CCA 90 bp AAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACAGGAGGTAGCTGTCATTaGCGACGGGCAGGGCGATCT +
Preference number: 2 (lower is better)
Translates to: KSRSMAVRTQSSMSKYCTGGSCH*RRAGRS
Trigger: AGATCGCCCTGCCCGTCGCCAATGACAGCTACCTCC...TGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCCCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCT +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSPGGCP*TASWQS
Trigger: AGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGG...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp GTGATAAAAAGATTATATGGTGGAGGAGCGGAGGCTGAGGAAGAATaGGGACCTAGCTCGGCCTGGCAAGGAGCAGCCTGGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VIKRLYGGGAEAEEE*GPSSAWQGAAWGGG
Trigger: CCCTCCTCCCCAGGCTGCTCCTTGCCAGGCCGAGCTAGGTCCCAATTCTTCCTCAGCCTCCGCTCCTCCACCATATAATCTTTTTATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTaGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGT +
Preference number: 2 (lower is better)
Translates to: SRRGSGRVPAHRHAA*QSFPHGTWLQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTTCCAAGCCTGTGACTaGCAGAGCAGCGTCTCCACC +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPFQACD*QSSVST
Trigger: GGTGGAGACGCTGCTCTGTCAGTCACAGGCTTGGAA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAGGAGTAGGAGAGGGTaGATTTTGGTGCCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRSRRG*ILVPAK
Trigger: CTTTGCAGGCACCAAAATTCACCCTCTCCTACTCCT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATGAGGAAGCTGATGGCTaGCTGCAGGTCCTCGTAGTC +
Preference number: 2 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDEEADG*LQVLVV
Trigger: GACTACGAGGACCTGCAGTCAGCCATCAGCTTCCTC...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 2 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQRGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGTGCACTCGGACTGTGTaGCTCTGGGCTTGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQCTRTV*LWACWR
Trigger: CCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCA...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGAGGGACTGAGCCCGTaGTGTGGTCATAAGCGCTCA +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPEGLSP*CGHKRS
Trigger: TGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGACTCCTGAGACCCTaGTGTGGGATGAGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGLLRP*CGMRVR
Trigger: TCTCACCCTCATCCCACAGCAGGGTCTCAGGAGTCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCAGAGCTCCATGGAATaGCTTCTTCCCATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEQSSME*LLPIPQ
Trigger: CTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCCAGGGTCTTTGCATGTaGAAGGCCCTTGCACCCAGT +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSQGLCM*KALAPS
Trigger: ACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTG...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGATAGAGGTTGGGGTTaGTTCCTGTTTGGGGCCATA +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEDRGWG*FLFGAI
Trigger: TATGGCCCCAAACAGGAAGCAACCCCAACCTCTATC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGGACCTTCCAGGCTCTTaGAGGAAATCTCATGTAAGT +
Preference number: 2 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQDLPGS*RKSHVS
Trigger: ACTTACATGAGATTTCCTGCAAGAGCCTGGAAGGTC...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLILKIL*RHSESQ
Trigger: TTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATAT...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCC +
Preference number: 2 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGYCSSV*CVKPVP
Trigger: GGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTA...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGGAACTGGAAGTACTaGTCTTCCGTCTGCTGCGTG +
Preference number: 2 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPRNWKY*SSVCCV
Trigger: CACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCT...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTGGGCTTGCTGGCGGTaGCACTTAAAGGAACTCATT +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEWACWR*HLKELI
Trigger: AATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACATCTGGGGGTTAACTaGGCAGTTGTGGGGCACTGG +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGHLGVN*AVVGHW
Trigger: CCAGTGCCCCACAACTGCCCAGTTAACCCCCAGATG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAATCTGGCTTGCATCTaGGGGTTAACTGGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEENLACI*GLTGQL
Trigger: CAACTGCCCAGTTAACCCCCAGATGCAAGCCAGATT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGCCAAAGCAAAAGCTTaGGGCCTGGGGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSAKAKA*GLGQME
Trigger: TTCCATCTGCCCCAGGCCCCAAGCTTTTGCTTTGGC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCACAGGGGATGCGATaGCTTGGCTTGGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSQGMR*LGLGSE
Trigger: CTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGTGGATCTTTCTCATaGACCAAAGAGCAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGGSFS*TKEQED
Trigger: GTCCTCCTGCTCTTTGGTCCATGAGAAAGATCCACC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGATAGATTTCCACGATaGAAAGGAAATGAGAGGTTC +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGDRFPR*KGNERF
Trigger: GAACCTCTCATTTCCTTTCCATCGTGGAAATCTATC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCTCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTG +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVSVKKH*LTVAML
Trigger: CAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGCAGGTGACGACAGCTaGAGTATCCAAGGCCTGTTG +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSAGDDS*SIQGLL
Trigger: CAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGTGCTCACGTCCGCGATaGAGTCCCCCTCAGGCACCT +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQCSRPR*SPPQAP
Trigger: AGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp TCTGGAGGAATGCCTGGCCGCTGCAGTTCAGGTGTTTGGAAGTTCTaGTGTGCTGGAGATGTGGCTGGGGTTTGTCTCACAGTGGAGGCA +
Preference number: 2 (lower is better)
Translates to: SGGMPGRCSSGVWKF*CAGDVAGVCLTVEA
Trigger: TGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGTACACGTGTGCAGTaGATGTTTAGCAAATACATA +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCTRVQ*MFSKYI
Trigger: TATGTATTTGCTAAACATTCACTGCACACGTGTACA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGCCTAAACGCTATCTaGTTTGGGATAAAGAAAAAG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSLNAI*FGIKKK
Trigger: CTTTTTCTTTATCCCAAATCAGATAGCGTTTAGGCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGCTTCCGTCTGCTGCGTaGAGCCAGTCCCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGLPSAA*SQSPPA
Trigger: TGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAG...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGTGAATTTTGGTGCCTaGAAAGCAGCCTGGCCTCGC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGVNFGA*KAAWPR
Trigger: GCGAGGCCAGGCTGCTTTGCAGGCACCAAAATTCAC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCATTGTACCTCCTGGTaGAGGCTGCAGGCCTCGCCA +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQHCTSW*RLQASP
Trigger: TGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGCCTCTTTGACAGGCTaGAGAGGATGGCACTGTTGC +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPASLTG*RGWHCC
Trigger: GCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCCTCTTTGACAGGCTaGAGAGGATGGCACTGTTGC +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFASLTG*RGWHCC
Trigger: GCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCCTGACGCACTGTGCTaGAAGCTGCTTTCAAACAAA +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEPDALC*KLLSNK
Trigger: TTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTGTGTTGGCTGTGGGGTaGCGCATACCGTGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLVLAVG*RIPWVS
Trigger: GGACACCCACGGTATGCGGCACCCCACAGCCAACAC...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCCGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACG +
Preference number: 2 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPRAINL*QKPTGT
Trigger: CGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPAADQHP*YKPLPE
Trigger: TTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGC...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTGCCTCTGGGCTTGCTaGCGGTGGCACTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFCLWAC*RWHLKE
Trigger: TTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCCAAAGCAAAAGCTTaGGGCCTGGGGCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFAKAKA*GLGQME
Trigger: TTCCATCTGCCCCAGGCCCCAAGCTTTTGCTTTGGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGGTCGCTGGCAGCCGATaGTGCTGCCCACGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGVAGSR*CCPRPS
Trigger: TGAAGGACGTGGGCAGCACCATCGGCTGCCAGCGAC...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGGCCAGGTTTAGATaGAAGGAGATGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: SCRSISARLISIRAINLCQARFR*KEMGQE
Trigger: CTCCTGCCCCATCTCCTTCCATCTAAACCTGGCCTG...GCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 90 bp CTCAGCATGGTGTCTGCCGGTACGTTAGCAAAGTTCTTGAATTTTTaGATGTGGAAGCGCTTGACGGCCACAGGCTGGCCCTGGTACCGG +
Preference number: 2 (lower is better)
Translates to: LSMVSAGTLAKFLNF*MWKRLTATGWPWYR
Trigger: CCGGTACCAGGGCCAGCCTGTGGCCGTCAAGCGCTTCCACATCAAAAAATTCAAGAACTTTGCTAACGTACCGGCAGACACCATGCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp CTTGTGCAGGTAGGCCAGGCCCGAGGCGATCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAGGGGTATAAAGGAAGAATCTCTGGC +
Preference number: 2 (lower is better)
Translates to: LVQVGQARGDLVGYF*GEHVSQGYKGRISG
Trigger: GCCAGAGATTCTTCCTTTATACCCCTGGGACACATGCTCACCCAAAAAATAGCCTACCAGATCGCCTCGGGCCTGGCCTACCTGCACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGGCCGCTCCCAGCCTaGTACCACTGTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRPLPA*YHCLPW
Trigger: CCAGGGAAGACAGTGGTATCAGGCTGGGAGCGGCCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTTGGGCTGGTTGGTCTaGGGACTTGAGGTTGTAGGT +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPLGWLV*GLEVVG
Trigger: ACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAGAAAGTTACATGGATTaGCACGTTCTGGTGGGTTGT +
Preference number: 2 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPESYMD*HVLVGC
Trigger: ACAACCCACCAGAACGTGTCAATCCATGTAACTTTC...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCTGCACCCCTGCTCCTaGAAACTGATGGGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYLHPCS*KLMGEA
Trigger: GGCCTCCCCCATCAGTTTGCAGGAGCAGGGGTGCAG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCCACAACAGGGTCTTTaGATGTGCAAGGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPPQQGL*MCKALA
Trigger: TGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRPDAL*CKLLSN
Trigger: GTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 2 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGTGTTGGCTGTGGGGTaGCGCATACCGTGGGTGTCC +
Preference number: 2 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLVLAVG*RIPWVS
Trigger: GGACACCCACGGTATGCGGCACCCCACAGCCAACAC...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCATCCATGTCGAAGTACTaGACATCCTCTGATTTCTCA +
Preference number: 2 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPASMSKY*TSSDFS
Trigger: TGAGAAATCAGAGGATGTGCAGTACTTCGACATGGA...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCGCTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQRCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTCAGCAGTTGGGGGATaGGGTATTCAGAGAACTCTG +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSSAVGG*GIQRTL
Trigger: CAGAGTTCTCTGAATACCCCATCCCCCAACTGCTGA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCAGCGTCTCCACCCATaGAAGCTGCTCAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYQRLHP*KLLRGH
Trigger: GTGGCCCCTGAGCAGCTTCCATGGGTGGAGACGCTG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCAGAGATATAAGAGGTaGGGGCATGGAAATAAGGGA +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEQRYKR*GHGNKG
Trigger: TCCCTTATTTCCATGCCCCCACCTCTTATATCTCTG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGCTGGAGATGTGGCTaGGGTTTGTCTCACAGTGGA +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGCWRCG*GLSHSG
Trigger: TCCACTGTGAGACAAACCCCAGCCACATCTCCAGCA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGCAGCACCACGGCGTTTaGGGCCTTGGCCTCGATGTT +
Preference number: 2 (lower is better)
Translates to: ARSVAILSTRNLASIKSRQHHGV*GLGLDV
Trigger: AACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTG...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGATCAAGGAATTGACGTaGTCCGTGATGAAAGCCATG +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWIKELT*SVMKAM
Trigger: CATGGCTTTCATCACGGACCACGTCAATTCCTTGAT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGATCAAGGAATTGACGTaGTCCGTGATGAAAGCCATG +
Preference number: 2 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGIKELT*SVMKAM
Trigger: CATGGCTTTCATCACGGACCACGTCAATTCCTTGAT...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTQAPLG*PCGWLP
Trigger: CGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp AATGTAAAGGCTAAGCGGGTGCACTCGGACTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAAGGAACTCATTCATTCTCTGGATGG +
Preference number: 2 (lower is better)
Translates to: NVKAKRVHSDCVPLG*LAVALKGTHSFSGW
Trigger: CCATCCAGAGAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCACCCGCTTAGCCTTTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp ATGGGGGCTGTCTGTGAAGCTTTGGGGCAGTACAGCCCAGGTAATTaGCTGAGCCTGATGGGTGTCAGGGTCAGTCCAAGTGAAAGTGAA +
Preference number: 2 (lower is better)
Translates to: MGAVCEALGQYSPGN*LSLMGVRVSPSESE
Trigger: TTCACTTTCACTTGGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPEHRDI*SWLAQA
Trigger: AGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAGGTG +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYGRRIA*TWEAEV
Trigger: CACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGGCGGGCGGATCACCTaGGCTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTGGRIT*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAGGTGATCCGCCCGCC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCCTCTGAAACCTGGGTaGATAATCAGAGAGGTGTCC +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPPLKPG*IIREVS
Trigger: GGACACCTCTCTGATTATTCACCCAGGTTTCAGAGG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGCCTTGGCCTCGATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 2 (lower is better)
Translates to: ARSVAILSTRNLASIKSRPWPRC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGG...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGGCCTGTGCTCCAGCTaGGTCCAAATTTACTTGACA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFGLCSS*VQIYLT
Trigger: TGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGATGGAATCTGGCTTaGATCTGGGGGTTAACTGGG +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRWNLA*IWGLTG
Trigger: CCCAGTTAACCCCCAGATGCAAGCCAGATTCCATCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCCTCCTGGTGCAGGCTaGAGGCCTCGCCAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGPPGAG*RPRQPQ
Trigger: CTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACAGAGCTCCATGGAATaGCTTCTTCCCATTCCTCAG +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGQSSME*LLPIPQ
Trigger: CTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCACTTGCAATTCTGTGTaGACAGTCCCCTCCTTCAAG +
Preference number: 2 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSTCNSV*TVPSFK
Trigger: CTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: RLISIRAINLCQKPTGTKHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCATAGGCACGCAGCGTTaGAATCCTTTCCACACGGAA +
Preference number: 2 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPIGTQR*NPFHTE
Trigger: TTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTAT...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 2 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGATTCCATCTGAGACCTaGGGATGGCAGGAAGGCCCG +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVIPSET*GWQEGP
Trigger: CGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAAT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTTCAAACTCCCATTCTaGTTTAAGGAGCCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHFKLPF*FKEPQR
Trigger: CCTTTGGGGCTCCTTAAACCAGAATGGGAGTTTGAA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATTAAGAAGGAGATGCTaGCTGGTTACCACCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGLRRRC*LVTTLC
Trigger: GCAGAGGGTGGTAACCAGCCAGCATCTCCTTCTTAA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGT +
Preference number: 2 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAFPHGT*LQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAA...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 90 bp CAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTG +
Preference number: 2 (lower is better)
Translates to: QVHLRQADQHPCYKP*PEANGNEAHLKYPL
Trigger: CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAATGTGCTGAGAGCCTaGGGTCTCTGGCGGGGAAAG +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYNVLRA*GLWRGK
Trigger: CTTTCCCCGCCAGAGACCTCAGGCTCTCAGCACATT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGAAATCCCATACAATGTaGTTTCACAACCAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWKSHTM*FHNQKP
Trigger: AGGCTTCTGGTTGTGAAATCACATTGTATGGGATTT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAAACACAGAGATTCTTaGCTGTGTCTCCGGTCACAG +
Preference number: 2 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPKHRDS*LCLRSQ
Trigger: CTGTGACCGGAGACACAGTCAAGAATCTCTGTGTTT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTCCATTCAGCAAAGTaGGTTGTAAAGTTGACTGAA +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELHSAK*VVKLTE
Trigger: TTCAGTCAACTTTACAACTCACTTTGCTGAATGGAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGTTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTLGSEA*RTVLQA
Trigger: AGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAA...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR TCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGCCTTGGCCTCGATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 2 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLPWPRC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGG...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAGATTTCTTTTCACTCTaGATGTGCTACAGCGATTTC +
Preference number: 2 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPDFFSL*MCYSDF
Trigger: GAAATCGCTGTAGCACATTCAGAGTGAAAAGAAATC...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGTGGGCAAGGAGGGGCTaGCCATTATCCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTWARRG*PLSPDS
Trigger: GCTGTCTGGGGATAATGGGCAGCCCCTCCTTGCCCA...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGCTCAGGGGCCACCTaGATGTTGGCACAGTGGGCA +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQACSGAT*MLAQWA
Trigger: TGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGCA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCCACCCATGGAAGCTaGTCAGGGGCCACCTGCATG +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASTHGS*SGATCM
Trigger: CATGCAGGTGGCCCCTGAGCAGCTTCCATGGGTGGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGTTTAAGAAGGAGATaGTGGCTGGTTACCACCCTC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGCLRRR*WLVTTL
Trigger: GAGGGTGGTAACCAGCCAGCATCTCCTTCTTAAACA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCCACAACAGGGTCTTTaGATGTGCAAGGCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQPQQGL*MCKALA
Trigger: TGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGGCAGCCGATGGTGCTaGCCACGTCCTTCATGCTGC +
Preference number: 2 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLGSRWC*PRPSCC
Trigger: GCAGCATGAAGGACGTGGGCAGCACCATCGGCTGCC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGCTGGCAGCCGATGGTaGTGCCCACGTCCTTCATGC +
Preference number: 2 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLAGSRW*CPRPSC
Trigger: GCATGAAGGACGTGGGCAGCACCATCGGCTGCCAGC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAA +
Preference number: 2 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQILKIL*RHSESQ
Trigger: TTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATAT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGCATCCTGAGGTCTTCTaGTCTGATCACCCCATTCTT +
Preference number: 2 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQHPEVF*SDHPIL
Trigger: AAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATG...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 2 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGGGTTTGTCTCACAGTaGAGGCAAGGAATTGCAACT +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGGFVSQ*RQGIAT
Trigger: AGTTGCAATTCCTTGCCTCCACTGTGAGACAAACCC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RAINLCQKPTGTKLILNTLSSQN*RLATAS
Trigger: GGAGGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAA...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATTGACACGTTCTGGTaGGTTGTTTATGGATTTCTG +
Preference number: 2 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPIDTFW*VVYGFL
Trigger: CAGAAATCCATAAACAACCCACCAGAACGTGTCAAT...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCTCTTGGAAAGTTACATaGATTGACACGTTCTGGTGG +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVSWKVT*IDTFWW
Trigger: CCACCAGAACGTGTCAATCCATGTAACTTTCCAAGA...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 90 bp GTTAGTGCTGCCTGCCTCTTTGACAGGCTGCAGAGGATGGCACTGTaGCATGTGCAGGAATTTTATGACCTCCCTCATGATAGAGGTTGG +
Preference number: 2 (lower is better)
Translates to: VSAACLFDRLQRMAL*HVQEFYDLPHDRGW
Trigger: CCAACCTCTATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCACTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp TTAAGGTCGGGGGATACAAGAGGAGGACACAAAGGAGGCTTTGGATaGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAATA +
Preference number: 2 (lower is better)
Translates to: LRSGDTRGGHKGGFG*GRRAVMRCGCSPGI
Trigger: TATTCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGTCCTCCTCTTGTATCCCCCGACCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp GTGTCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTaGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACG +
Preference number: 2 (lower is better)
Translates to: VSGISQAIPMRMHLD*GIPYGSWKVTWIDT
Trigger: CGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGGCCGCTCCCAGCCTaGTACCACTGTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSERPLPA*YHCLPW
Trigger: CCAGGGAAGACAGTGGTATCAGGCTGGGAGCGGCCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAG +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEASKFT*QSYKHK
Trigger: CTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTAGGCGGAGGTGGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRRRWQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCCACCTCCGCCT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATGCACTCGGACTGTGTaGCTCTGGGCTTGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLCTRTV*LWACWR
Trigger: CCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTGGCACTGTTGCATGTaGAGGAATTTTATGACCTCC +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFWHCCM*RNFMTS
Trigger: GGAGGTCATAAAATTCCTGCACATGCAACAGTGCCA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGACCTTCCAGGCTCTTaGAGGAAATCTCATGTAAGT +
Preference number: 2 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSDLPGS*RKSHVS
Trigger: ACTTACATGAGATTTCCTGCAAGAGCCTGGAAGGTC...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTGCCTCTGGGCTTGCTaGCGGTGGCACTTAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYCLWAC*RWHLKE
Trigger: TTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGT +
Preference number: 2 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVFPHGT*LQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAA...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGCCTGTGGAATGTGCTaGGAGCCTGAGGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGACGMC*EPEVSG
Trigger: GCCAGAGACCTCAGGCTCTCAGCACATTCCACAGGC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCTTTTTCCAAGCCTGTaGCTGACAGAGCAGCGTCTC +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYLFPSL*LTEQRL
Trigger: GAGACGCTGCTCTGTCAGTCACAGGCTTGGAAAAAG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGAAACACAGAGATTCTTaGCTGTGTCTCCGGTCACAG +
Preference number: 2 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQKHRDS*LCLRSQ
Trigger: CTGTGACCGGAGACACAGTCAAGAATCTCTGTGTTT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGLGSEA*RTVLQA
Trigger: AGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGTGTGCCTCTGGGCTTaGTGGCGGTGGCACTTAAAG +
Preference number: 2 (lower is better)
Translates to: DYYVQTNRACAPAASKFTVCLWA*WRWHLK
Trigger: CTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACAC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTGCTCAGGGGCCACCTaGATGTTGGCACAGTGGGCA +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSECSGAT*MLAQWA
Trigger: TGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGCA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCCATATTCTAAGAGATaGTATAGTGAACATCCTTGT +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEPYSKR*YSEHPC
Trigger: ACAAGGATGTTCACTATAGCATCTCTTAGAATATGG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGATAGAGGTTGGGGTTaGTTCCTGTTTGGGGCCATA +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVDRGWG*FLFGAI
Trigger: TATGGCCCCAAACAGGAAGCAACCCCAACCTCTATC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRPDAL*CKLLSN
Trigger: GTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGGTTGGGGGTTTCTTaGCCCCCAGAAAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGLGVS*PPERRR
Trigger: TCTCCGCCTTTCTGGGGGGCAAGAAACCCCCAACCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGCACCTCAGACCATTTaGCCATTTTACGACAAGAAT +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGAPQTI*PFYDKN
Trigger: ATTCTTGTCGTAAAATGGGCAAATGGTCTGAGGTGC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: DYYVQTNRACAPAASKFTRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTTAAGAAGGAGATGCTaGCTGGTTACCACCCTCTGC +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVLRRRC*LVTTLC
Trigger: GCAGAGGGTGGTAACCAGCCAGCATCTCCTTCTTAA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTTGTTCTGTATCTTTaGGCACTTTTACCAAGATTT +
Preference number: 2 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELVLYL*ALLPRF
Trigger: AAATCTTGGTAAAAGTGCCCAAAGATACAGAACAAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGGCAACGTGCTCAGTaGGGGAGCTTTTTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAWQRAQ*GSFLSQ
Trigger: CTGGCTCAAAAAGCTCCCCCACTGAGCACGTTGCCA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGAAAGAAGGAAGATTTaGGATGAGTTGCACTGGGAA +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFERRKI*DELHWE
Trigger: TTCCCAGTGCAACTCATCCCAAATCTTCCTTCTTTC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATTTCAAAGCATGCTGTaGGATGGGATATTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGFQSML*DGILVL
Trigger: CAACACCAATATCCCATCCCACAGCATGCTTTGAAA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp ACCAAATTTAATGCACGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGCGCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: TKFNARPCEETTKQA*CEQQGCLFHLGAGG
Trigger: CCCACCTGCGCCCAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGTGCATTAAATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTGTGGGGCACTGGAATaGGAGGAGAGGGAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSCGALE*EERESG
Trigger: CCCACTCTCCCTCTCCTCTCATTCCAGTGCCCCACA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCTCAGAACAGGATCCTaGACCCCTGCTCCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: DYYVQTNRACAPAASKFTLRTGS*TPAPAN
Trigger: GTTTGCAGGAGCAGGGGTGCAGGATCCTGTTCTGAG...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCATCTGATCTTGGCTTaGCCAAGCTGGCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGHLILA*PSWPRP
Trigger: AGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCATGTGCAAGGCCCTTaGACCCAGTGCCCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHVQGP*TQCPQS
Trigger: GCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCACTGTGCTGCAAGCTaGTTTCAAACAAATGCATTT +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFHCAAS*FQTNAF
Trigger: AAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR GCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGATAGGCACGCAGCGTTaGAATCCTTTCCACACGGAA +
Preference number: 2 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLIGTQR*NPFHTE
Trigger: TTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTAT...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTATTCCATCTGAGACCTaGGGATGGCAGGAAGGCCCG +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGIPSET*GWQEGP
Trigger: CGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAAT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGGAGAGGGTGAATTTTaGTGCCTGCAAAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTGEGEF*CLQSSL
Trigger: CAGGCTGCTTTGCAGGCACCAAAATTCACCCTCTCC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAACATTTTACTGTTGTaGAGACTGTTTCCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGNILLL*RLFPCC
Trigger: ACAGCAGGGAAACAGTCTCCACAACAGTAAAATGTT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCCTCATGATAGAGGTTaGGGTTGCTTCCTGTTTGGG +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYPHDRG*GCFLFG
Trigger: CCCAAACAGGAAGCAACCCCAACCTCTATCATGAGG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGGGATGAGTTGCACTaGGAACAGAGACTAGGGAGG +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAWDELH*EQRLGR
Trigger: CCTCCCTAGTCTCTGTTCCCAGTGCAACTCATCCCA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAAACGAGGCATGAACTaGGCTGGGTTTTTATATTTG +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGKRGMN*AGFLYL
Trigger: CAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp TCATGGGGGTCAGGTGTGGTATCAGGAATAATGTGGGAGGCTGGATaGAAGTCGGTGCCAGGAAAAATGGTAATTGTGGGAGACTCAATA +
Preference number: 2 (lower is better)
Translates to: SWGSGVVSGIMWEAG*KSVPGKMVIVGDSI
Trigger: TATTGAGTCTCCCACAATTACCATTTTTCCTGGCACCGACTTCAATCCAGCCTCCCACATTATTCCTGATACCACACCTGACCCCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGTGTGGCGCCAAGATTaGAAGGAGAAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAVWRQD*KEKEVE
Trigger: CTCAACCTCTTTCTCCTTTCAATCTTGGCGCCACAC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCAGGGTCTTTGCATGTaGAAGGCCCTTGCACCCAGT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGQGLCM*KALAPS
Trigger: ACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 2 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGAACTCATTCATTCTCTaGATGGGGCAACACTCCTCA +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVNSFIL*MGQHSS
Trigger: TGAGGAGTGTTGCCCCATCCAGAGAATGAATGAGTT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGTTAACTGGGCAGTTGTaGGGCACTGGAATGAGAGGA +
Preference number: 2 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTLTGQL*GTGMRG
Trigger: TCCTCTCATTCCAGTGCCCCACAACTGCCCAGTTAA...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGAAGGAGATGCTGGCTaGTTACCACCCTCTGCCAAC +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEEGDAG*LPPSAN
Trigger: GTTGGCAGAGGGTGGTAACCAGCCAGCATCTCCTTC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTCACATTGTACCTCCTaGTGCAGGCTGCAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSSHCTS*CRLQAS
Trigger: CGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCTTAAGTGGAACTGCTaGGTCAGAGGGTATGTGCAT +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYLKWNC*VRGYVH
Trigger: ATGCACATACCCTCTGACCCAGCAGTTCCACTTAAG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGCATTTATTATATCTTaGAGAACATTCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGAFIIS*RTFQSS
Trigger: GCTGGACTGGAATGTTCTCCAAGATATAATAAATGC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCATTTATTATATCTTaGAGAACATTCCAGTCCAGC +
Preference number: 2 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFAFIIS*RTFQSS
Trigger: GCTGGACTGGAATGTTCTCCAAGATATAATAAATGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGT +
Preference number: 2 (lower is better)
Translates to: PYGSWKVTWIDTFWWVVYPWTAS*QSGAGG
Trigger: ACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGG...ATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 90 bp AGGTATTTTAGTTATCTGACTCGGGGCATGTTGAGTAAAGTCAATTaGCCAGTCCTGGGTGGAGGCAAATCCCTGAGCTTGATGTGTAGG +
Preference number: 2 (lower is better)
Translates to: RYFSYLTRGMLSKVN*PVLGGGKSLSLMCR
Trigger: CCTACACATCAAGCTCAGGGATTTGCCTCCACCCAGGACTGGCAAATTGACTTTACTCAACATGCCCCGAGTCAGATAACTAAAATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp TTGATGTTGATGTGCTCCTTGACGTCAAGGGACCACACCAGAATGTaGTCCGACTTCAGGTCACAGAAGATGATGTTTTTCTTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: LMLMCSLTSRDHTRM*SDFRSQKMMFFLCR
Trigger: CCTGCACAAGAAAAACATCATCTTCTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTCCCTTGACGTCAAGGAGCACATCAACATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTGGAGACTGTTTCCCTaGTGTTGGGTGAGGTCAAGC +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEWRLFP*CWVRSS
Trigger: GCTTGACCTCACCCAACAGCAGGGAAACAGTCTCCA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACCATATTCTAAGAGATaGTATAGTGAACATCCTTGT +
Preference number: 2 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGPYSKR*YSEHPC
Trigger: ACAAGGATGTTCACTATAGCATCTCTTAGAATATGG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGCAGTTAGTGCTGCCTaGCTCTTTGACAGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSAVSAA*LFDRLQ
Trigger: CTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGTGGATCAGAGAGATaGAGTCATGGGGGTCAGGTG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGGSER*SHGGQV
Trigger: CACCTGACCCCCATGACTGCATCTCTCTGATCCACC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATCGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACG +
Preference number: 2 (lower is better)
Translates to: PYGSWKVTWIDTFWWVVYRAINL*QKPTGT
Trigger: CGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG...ATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACT +
Preference number: 2 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLGRSQT*PGTGST
Trigger: AGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCTCCATTCAGCAAAGTaGGTTGTAAAGTTGACTGAA +
Preference number: 2 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVLHSAK*VVKLTE
Trigger: TTCAGTCAACTTTACAACTCACTTTGCTGAATGGAG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCATTCATTCTCTGGATaGGGCAACACTCCTCACCCG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHSFSG*GNTPHP
Trigger: CGGGTGAGGAGTGTTGCCCCATCCAGAGAATGAATG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTGGGCTTGCTGGCGGTaGCACTTAAAGGAACTCATT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGWACWR*HLKELI
Trigger: AATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGAGAGGGTGAATTTTaGTGCCTGCAAAGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGEGEF*CLQSSL
Trigger: CAGGCTGCTTTGCAGGCACCAAAATTCACCCTCTCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 90 bp GCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTATATCTaGGAGAACATTCCAGTCCAGCAGTTAGTGCTGCCTGCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: ALCCKLLSNKCIYYI*ENIPVQQLVLPASL
Trigger: CAAAGAGGCAGGCAGCACTAACTGCTGGACTGGAATGTTCTCCAAGATATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSEHRDI*SWLAQA
Trigger: AGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAAATCCCATACAATGTaGTTTCACAACCAGAAGCCT +
Preference number: 2 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYKSHTM*FHNQKP
Trigger: AGGCTTCTGGTTGTGAAATCACATTGTATGGGATTT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGAGAGTATATGGGTTTaGCACCATGGGGTGGATAGG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSESIWV*HHGVDR
Trigger: CCTATCCACCCCATGGTGTCAAACCCATATACTCTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGAAGAGAGGCTGGGATaGAGGGTGCAAAGGAATAGT +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSEERLG*RVQRNS
Trigger: ACTATTCCTTTGCACCCTTCATCCCAGCCTCTCTTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAACAAACAGGGCCTGTaGTCCAGCTGCGTCCAAATT +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSNKQGL*SSCVQI
Trigger: AATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTTGGAAGTTCTTGTGTaGTGGAGATGTGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLEVLV*WRCGWG
Trigger: ACCCCAGCCACATCTCCAGCACACAAGAACTTCCAA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAA +
Preference number: 2 (lower is better)
Translates to: PYGSWKVTWIDTFWWVVYADQHP*YKPLPE
Trigger: TTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGC...ATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTACCACTGTCTTCCCTaGGGCTGTAAAATCAGCAGT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGYHCLP*GCKISS
Trigger: ACTGCTGATTTTACAGCCCCAGGGAAGACAGTGGTA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATACCACTGTCTTCCCTaGGGCTGTAAAATCAGCAGT +
Preference number: 2 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLYHCLP*GCKISS
Trigger: ACTGCTGATTTTACAGCCCCAGGGAAGACAGTGGTA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCCATAAATCCCCTGTaGACAACGTTCCTTTTCGTA +
Preference number: 2 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASINPL*TTFLFV
Trigger: TACGAAAAGGAACGTTGTCCACAGGGGATTTATGGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTTAAGAGAAAATTGCTaGGCAGGTAGGGGAGGGCTA +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGLRENC*AGRGGL
Trigger: TAGCCCTCCCCTACCTGCCCAGCAATTTTCTCTTAA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGAAGTTCTTGTGTGCTaGAGATGTGGCTGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSEVLVC*RCGWGL
Trigger: CAAACCCCAGCCACATCTCCAGCACACAAGAACTTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAGAGAGATGCAGTCATaGGGGTCAGGTGTGGTATCA +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSREMQS*GSGVVS
Trigger: TGATACCACACCTGACCCCCATGACTGCATCTCTCT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGGAAGAAGGAAATGTaGGGAAATGGGGTGAACGTC +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGKKEM*GNGVNV
Trigger: GACGTTCACCCCATTTCCCCACATTTCCTTCTTCCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGCAGGATGGAAAAATTaGAAGTGCTGTTTTCCGGCT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGAGWKN*KCCFPA
Trigger: AGCCGGAAAACAGCACTTTCAATTTTTCCATCCTGC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTGTTTAAGAAGGAGATaGTGGCTGGTTACCACCCTC +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSCLRRR*WLVTTL
Trigger: GAGGGTGGTAACCAGCCAGCATCTCCTTCTTAAACA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTACACAAAGGAGGCTTTaGATTGGGAAGAAGGGCAGT +
Preference number: 2 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSTQRRL*IGKKGS
Trigger: ACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTCCGCTGTACACGTGTaGAGTGAATGTTTAGCAAAT +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGSAVHV*SECLAN
Trigger: ATTTGCTAAACATTCACTGCACACGTGTACAGCGGA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAACTCATTCATTCTCTaGATGGGGCAACACTCCTCA +
Preference number: 2 (lower is better)
Translates to: FGINPIQCDFTTRSLTAENSFIL*MGQHSS
Trigger: TGAGGAGTGTTGCCCCATCCAGAGAATGAATGAGTT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTCCATAAATCCCCTGTaGACAACGTTCCTTTTCGTA +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGSINPL*TTFLFV
Trigger: TACGAAAAGGAACGTTGTCCACAGGGGATTTATGGA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTATAGGCAAAACAATGTaGTTGATAAGGCACAGATCC +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGIGKTM*LIRHRS
Trigger: GGATCTGTGCCTTATCAACCACATTGTTTTGCCTAT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAG +
Preference number: 2 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLASKFT*QSYKHK
Trigger: CTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAACAAGATTATTATGTaGAAACAAACAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSENKIIM*KQTGPV
Trigger: CACAGGCCCTGTTTGTTTGCACATAATAATCTTGTT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAACAAGATTATTATGTaGAAACAAACAGGGCCTGTG +
Preference number: 2 (lower is better)
Translates to: FGINPIQCDFTTRSLTAENKIIM*KQTGPV
Trigger: CACAGGCCCTGTTTGTTTGCACATAATAATCTTGTT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCCGTTTTATAAGATTTaGGTAGGTAAAGGAAAAAGG +
Preference number: 2 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGPFYKI*VGKGKR
Trigger: CCTTTTTCCTTTACCTACCCAAATCTTATAAAACGG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CGGCCACAGGCTGGCCCTGGTACCGGGCCCGGTAGATaGCGGTGCCACTGCCGCCCTGGCCCAGGACGCTGC +
Preference number: 3 (lower is better)
Translates to: RPQAGPGTGPGR*RCHCRPGPGRC
Trigger: GCAGCGTCCTGGGCCAGGGCGGCAGTGGCACCGTCATCTACCGGGCCCGGTACCAGGGCCAGCCTGTGGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAGGCTCAGGTAGCTCCT +
Preference number: 3 (lower is better)
Translates to: LHVVVPAAALLL*QHGLLQAQVAP
Trigger: AGGAGCTACCTGAGCCTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp AGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGTCCAAGGGCCGCACGG +
Preference number: 3 (lower is better)
Translates to: SPPQAPLGWPCG*LPGVPCPRAAR
Trigger: CCGTGCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAAGGGCCGCACGGGAAA +
Preference number: 3 (lower is better)
Translates to: PLRHLWVGRVAG*RGFRVQGPHGK
Trigger: TTTCCCGTGCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CTCGCAGACCGGGCAGGGCACGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: LADRAGHVLLHE*RPVALCGCQGG
Trigger: CCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGCGCCACGATGCAGGGG +
Preference number: 3 (lower is better)
Translates to: LSGASSRAKQSG*MLMPMSATMQG
Trigger: CCCCTGCATCGTGGCGCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp ATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCCGTGTCCAAGGGCCGC +
Preference number: 3 (lower is better)
Translates to: MESPSGTFGLAV*LAAGGSVSKGR
Trigger: GCGGCCCTTGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CGTCCGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCGGGGGTTCCGTGTCCA +
Preference number: 3 (lower is better)
Translates to: RPRWSPPQAPLG*PCGWLPGVPCP
Trigger: TGGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGCTGCCGGGGGTTCCGT +
Preference number: 3 (lower is better)
Translates to: AHVRDGVPLRHL*VGRVAGCRGFR
Trigger: ACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp GCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCGTCGCTCTCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: AQAVSQTGQGTY*SMSGVPSLSVA
Trigger: AGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGCCGGAACTCGGAGAAG +
Preference number: 3 (lower is better)
Translates to: PMSATMQGCCSA*SMLASCRNSEK
Trigger: CTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCACGGAGAGAAGGGGTaGGGGTCCTTGCCCATTCCC +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGHGEKG*GSLPIP
Trigger: GGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGTG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATaGGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGG +
Preference number: 3 (lower is better)
Translates to: LSRRPGRARTAP*VASRRSLWLSG
Trigger: CCCTGACAGCCACAGAGAGCGACGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp GGGAAGTCGGTCATGAACAGTTCAGGGACCAGCTCCTaGAGCGGCACGGGGAGGTCCGGGTGTCTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: GKSVMNSSGTSS*SGTGRSGCLGQ
Trigger: CTGCCCCAGACACCCGGACCTCCCCGTGCCGCTGCAGGAGCTGGTCCCTGAACTGTTCATGACCGACTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCCAGAACCGGGCGGATG +
Preference number: 3 (lower is better)
Translates to: QHSIMSACSRRN*TSSGCPRTGRM
Trigger: CATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: APEPGGCPWTAS*QSGAGGGPVQG
Trigger: GCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCGCCTTGGCCTCGATGTaGAGCAGCCAGAACTGGAGG +
Preference number: 3 (lower is better)
Translates to: DADERHDAGVLQRVQHAGALASM*SSQNWR
Trigger: CCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGGC...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGCTGATCACCCCATTCTaGGCCACTGACCGAGAGCCC +
Preference number: 3 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLLITPF*ATDREP
Trigger: GGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAG...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGTCGGACAGCACGGTGTaGAGGCTGCTGAGCGGCGCG +
Preference number: 3 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLSDSTV*RLLSGA
Trigger: CGCGCCGCTCAGCAGCCTCAACACCGTGCTGTCCGA...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp AGCGTCTCCACCCATGGAAGCTGCTCAGGGGCCACCTaGATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: SVSTHGSCSGAT*MLAQWARRGCP
Trigger: TGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGCAGCTTCCATGGGTGGAGACGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GCCTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTGGCTaGCAGGTGAGTTGGACAGTCCGATTTCCAGTGGGG +
Preference number: 3 (lower is better)
Translates to: ALGRSSRGSGSG*QVSWTVRFPVG
Trigger: CCCCACTGGAAATCGGACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp AGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTaGTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGG +
Preference number: 3 (lower is better)
Translates to: RSLTARIFTACR*WLKVSPSMGVR
Trigger: CCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp ACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCT +
Preference number: 3 (lower is better)
Translates to: TGRMPLDSFLAI*SWWWPSAGRCP
Trigger: AGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGC +
Preference number: 3 (lower is better)
Translates to: LPPAAPEPGGCP*TASWQSGAGGG
Trigger: GCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TGGAGAAAGGCACACTGGAAGAACTTGCTGGGGAGCTaGGGAGGCTTGAGGGGGACCTGGCAGCCTGGCGGG +
Preference number: 3 (lower is better)
Translates to: WRKAHWKNLLGS*GGLRGTWQPGG
Trigger: CCCGCCAGGCTGCCAGGTCCCCCTCAAGCCTCCCCAGCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 3 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp CCAGCCGCCTGCAGATCTCCAGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCATTGCTGTACCAGACCT +
Preference number: 3 (lower is better)
Translates to: PAACRSPGRHSR*QGGPAHCCTRP
Trigger: AGGTCTGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp GCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTaGCCATTATCCCCAGACAGCGAGTGGGTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: ATCMLAQWARRG*PLSPDSEWVWE
Trigger: CTCCCAGACCCACTCGCTGTCTGGGGATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GGAGCTTCCGCGGAGACCCCCACTTGCAATTCTGTGTaGACAGTCCCCTCCTTCAAGGCCGCAGCCACGCCA +
Preference number: 3 (lower is better)
Translates to: GASAETPTCNSV*TVPSFKAAATP
Trigger: TGGCGTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGCGGAAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp TACTGCACATCCTCTGATTTCTCACTGGGGTCCGTGTaGTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: YCTSSDFSLGSV*WAQAVSQTGQG
Trigger: GCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp TCTGGCTTAGTGTCCCAGCACTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACTTCCTCCGGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: SGLVSQHSIMSA*SRRNCTSSGCP
Trigger: GGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGACACTAAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp TGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCAGCACCGGGCGTATGT +
Preference number: 3 (lower is better)
Translates to: WLKVSPSMGVRS*SDLSEAAPGVC
Trigger: ACATACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp AGGGGCTGCCCATTATCCCCAGACAGCGAGTGGGTCTaGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGC +
Preference number: 3 (lower is better)
Translates to: RGCPLSPDSEWV*EGLSPCCGHKR
Trigger: GCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGATAATGGGCAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTaGTGGTGGCCCAGTGCAGGGCGCTGTCCTGACAGC +
Preference number: 3 (lower is better)
Translates to: RMPLDSFLAIWS*WWPSAGRCPDS
Trigger: GCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCA +
Preference number: 3 (lower is better)
Translates to: SLTARIFTACRC*LKVSPSMGVRS
Trigger: TGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGGGTTAACTGGGCAGTaGTGGGGCACTGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGGLTGQ*WGTGMR
Trigger: TCTCATTCCAGTGCCCCACAACTGCCCAGTTAACCC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCACCAGCACCACGGCGTTaGGGGCCTTGGCCTCGATGT +
Preference number: 3 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPPAPRR*GPWPRC
Trigger: ACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTGG...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCTCGCTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPSLCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCGA...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTTTGATGTGGAAGCGCTaGACGGCCACAGGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: AAPEPGGCPWTASWQSGALMWKR*TATGWP
Trigger: GGGCCAGCCTGTGGCCGTCAAGCGCTTCCACATCAA...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 3 (lower is better)
Translates to: KVHTTVSFATTAASTSTPRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTACAGCCCAGGTAATTaGCTGAGCCTGATGGGTGTC +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGYSPGN*LSLMGV
Trigger: GACACCCATCAGGCTCAGCAAATTACCTGGGCTGTA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCAGGATGCACTTGGACTaGGGGATCCCCTATGGGTCT +
Preference number: 3 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPRMHLD*GIPYGS
Trigger: AGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCT...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 72 bp TGTTCTCCAGGAAGAGCCTGGCCGGGAAGTCGGTCATaGACAGTTCAGGGACCAGCTCCTGCAGCGGCACGG +
Preference number: 3 (lower is better)
Translates to: CSPGRAWPGSRS*TVQGPAPAAAR
Trigger: CCGTGCCGCTGCAGGAGCTGGTCCCTGAACTGTTCATGACCGACTTCCCGGCCAGGCTCTTCCTGGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp ACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATaGCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGT +
Preference number: 3 (lower is better)
Translates to: TALPPAAPEPGG*PWTASWQSGAG
Trigger: ACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTaGAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGG +
Preference number: 3 (lower is better)
Translates to: QMRSLTARIFTA*RCWLKVSPSMG
Trigger: CCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GAGAGCCTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGGACAGTCCGATTTCCAGT +
Preference number: 3 (lower is better)
Translates to: ESLGPEFQGLWE*LPGELDSPISS
Trigger: ACTGGAAATCGGACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CAGTCAGAGAGCCTTGGGCCGGAGTTCCAGGGGCTCTaGGAGTGGCTGCCAGGTGAGTTGGACAGTCCGATT +
Preference number: 3 (lower is better)
Translates to: QSESLGPEFQGL*EWLPGELDSPI
Trigger: AATCGGACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTCTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CCAAGAAGATCTGGGAAGGAGTCAGTCAGAGAGCCTTaGGCCGGAGTTCCAGGGGCTCTGGGAGTGGCTGCC +
Preference number: 3 (lower is better)
Translates to: PRRSGKESVREP*AGVPGALGVAA
Trigger: GGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTCTGACTGACTCCTTCCCAGATCTTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp ACCACCACGTACAGGGCCTTGTCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATG +
Preference number: 3 (lower is better)
Translates to: TTTYRALSVKKH*LTVAMLAGPPM
Trigger: CATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCATGGTGTCTGCCGGTA +
Preference number: 3 (lower is better)
Translates to: PAGTRRSSSWHR*PAGASAWCLPV
Trigger: TACCGGCAGACACCATGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATaGCATCGGTGGCCCGCAGGTGCCTCAGCATGGTGT +
Preference number: 3 (lower is better)
Translates to: CWPPAGTRRSSS*HRWPAGASAWC
Trigger: ACACCATGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGTCCTGACAGCAACTCG +
Preference number: 3 (lower is better)
Translates to: PLDSFLAIWSWW*PSAGRCPDSNS
Trigger: CGAGTTGCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TCGGTGGCTGTCCACAGGGATCTCTGGACCTGGAGCTaGCAGCTCACCTTCATCCCAGGGCAGCACATCCTC +
Preference number: 3 (lower is better)
Translates to: SVAVHRDLWTWS*QLTFIPGQHIL
Trigger: GAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTCAGCCCCCTGGGACTaGGTGCCCAGGTTGGTAAAA +
Preference number: 3 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYSAPWD*VPRLVK
Trigger: TTTTACCAACCTGGGCACCAAGTCCCAGGGGGCTGA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGTGCTGCCTGCCTCTTaGACAGGCTGCAGAGGATGG +
Preference number: 3 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEVLPAS*TGCRGW
Trigger: CCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCAC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCCAGCACCACGGCGTTaGGGGCCTTGGCCTCGATGT +
Preference number: 3 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMPAPRR*GPWPRC
Trigger: ACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTGG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCTGATCACCCCATTCTaGGCCACTGACCGAGAGCCC +
Preference number: 3 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWLITPF*ATDREP
Trigger: GGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATTCGGACAGCACGGTGTaGAGGCTGCTGAGCGGCGCG +
Preference number: 3 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDSDSTV*RLLSGA
Trigger: CGCGCCGCTCAGCAGCCTCAACACCGTGCTGTCCGA...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATC +
Preference number: 3 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLTGRMP*DSFLAI
Trigger: GATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp TTCCCACACGGAGACCTTCCCGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCTGGCCCAGGCCTCGGG +
Preference number: 3 (lower is better)
Translates to: FPHGDLPEHRDI*SWLAQAGPGLG
Trigger: CCCGAGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CACGCCAGGCTCTCCTGTCCCTCCCACACAGTGGCTTaGACCCACAACAGGGTCTTTGCATGTGCAAGGCCC +
Preference number: 3 (lower is better)
Translates to: HARLSCPSHTVA*THNRVFACARP
Trigger: GGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGAGGGACAGGAGAGCCTGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CCGGCCCATTGCTGTACCAGACCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCACTGGGTAGGGGTTCT +
Preference number: 3 (lower is better)
Translates to: PAHCCTRPQSRC*PPPWPSLGRGS
Trigger: AGAACCCCTACCCAGTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp CATGCGGAGTCAGCTCTCGGGCTTTTAAGACGGCAATaGCTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: HAESALGLLRRQ*LGPAGRQNPSP
Trigger: TGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAGCCCGAGAGCTGACTCCGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CCAGACAGCGAGTGGGTCTGGGAGGGACTGAGCCCGTaGTGTGGTCATAAGCGCTCAAAAGACAGAGGCCAC +
Preference number: 3 (lower is better)
Translates to: PDSEWVWEGLSP*CGHKRSKDRGH
Trigger: GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GTGTGGAGAGAGAGAATGGGCGATGTTTCTCAGGGCTaGTTCGAGCGGGATTCGGGGCGGCGTGGGAACCTA +
Preference number: 3 (lower is better)
Translates to: VWRERMGDVSQG*FERDSGRRGNL
Trigger: TAGGTTCCCACGCCGCCCCGAATCCCGCTCGAAGCAGCCCTGAGAAACATCGCCCATTCTCTCTCTCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp TGTGTGAGCACAGGTAGGAGCAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACACAGCCACAAGCCCAT +
Preference number: 3 (lower is better)
Translates to: CVSTGRSSCPLG*PAPRETQPQAH
Trigger: ATGGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCTACCTGTGCTCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp AGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTGGGGTCCCGCACAGAT +
Preference number: 3 (lower is better)
Translates to: SSRGSGSGCQVS*TVRFPVGSRTD
Trigger: ATCTGTGCGGGACCCCACTGGAAATCGGACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp ATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGCTGTCCTGACAGCAAC +
Preference number: 3 (lower is better)
Translates to: MPLDSFLAIWSW*WPSAGRCPDSN
Trigger: GTTGCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GACAGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTCACCTTCATCCCAGGG +
Preference number: 3 (lower is better)
Translates to: DRLVSVAVHRDL*TWSWQLTFIPG
Trigger: CCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 72 bp CTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGCGTCTTCATCCGCGAT +
Preference number: 3 (lower is better)
Translates to: LRAAVDHLHGLH*VGVLPCVFIRD
Trigger: ATCGCGGATGAAGACGCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGGCCCGGCCCTGCTTaGTTTGACCCAGCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRPGPA*FDPAQN
Trigger: GTTCTGAGCTGGGTCAAACAAAGCAGGGCCGGGCCT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCAGAGACATCTGATCTaGGCTTGCCCAAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHQRHLI*ACPSWP
Trigger: GGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCACCATTCCATAGGAGAA +
Preference number: 3 (lower is better)
Translates to: LELVVAQCRALS*QQLVEHHSIGE
Trigger: TTCTCCTATGGAATGGTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CGGGCTAGCGGCTTGTACTATAGCACAGCCTGCCTTTaGTGGTGTGTGGCCATTAGGCCTGGTGGAACTGCC +
Preference number: 3 (lower is better)
Translates to: RASGLYYSTACL*WCVAIRPGGTA
Trigger: GGCAGTTCCACCAGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGCCGCTAGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp TGGCAGCTCACCTTCATCCCAGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTCTCTGTGTTCACCACC +
Preference number: 3 (lower is better)
Translates to: WQLTFIPGQHIL*TSMRPFSVFTT
Trigger: GGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCCTGGGATGAAGGTGAGCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CAGCGGAGGGCCTCTAGTGTAATTCCATCTGAGACCTaGGGATGGCAGGAAGGCCCGGCCCTGCTTTGTTTG +
Preference number: 3 (lower is better)
Translates to: QRRASSVIPSET*GWQEGPALLCL
Trigger: CAAACAAAGCAGGGCCGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAATTACACTAGAGGCCCTCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GGCTGGGCTTTTCCAGGAGTAGGAGAGGGTGAATTTTaGTGCCTGCAAAGCAGCCTGGCCTCGCGTGATGCC +
Preference number: 3 (lower is better)
Translates to: GWAFPGVGEGEF*CLQSSLASRDA
Trigger: GGCATCACGCGAGGCCAGGCTGCTTTGCAGGCACCAAAATTCACCCTCTCCTACTCCTGGAAAAGCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp ATACGTGCAAGTCACAGGGGATGCGATGGCTTGGCTTaGGCTCAGAGGCCTGACGCACTGTGCTGCAAGCTG +
Preference number: 3 (lower is better)
Translates to: IRASHRGCDGLA*AQRPDALCCKL
Trigger: CAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCACGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGTTCTaGAGGAATGCCTGGCCGCTGCAGTTCAGGTGTTTG +
Preference number: 3 (lower is better)
Translates to: LALVASSWGRRF*RNAWPLQFRCL
Trigger: CAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAACCTCCTCCCCCAGGAGCTTGCTACAAGTGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GAAGGGGACGGGTTTACCTTCCACTGTGAGAGTTACTaGCAGCTCGGCGTCCGTGATGGTCTAGGGGGCTTC +
Preference number: 3 (lower is better)
Translates to: EGDGFTFHCESY*QLGVRDGLGGF
Trigger: GAAGCCCCCTAGACCATCACGGACGCCGAGCTGCCAGTAACTCTCACAGTGGAAGGTAAACCCGTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACCAGACGACCTCCTCCC +
Preference number: 3 (lower is better)
Translates to: AGRWWSGTSPRS*PCHPGTRRPPP
Trigger: GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GGACCCCGCAGAAGTACCGGGCACACAGCTGGTAGGTaGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGT +
Preference number: 3 (lower is better)
Translates to: GPRRSTGHTAGR*WSGTSPRSWPC
Trigger: ACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTGTGTGCCCGGTACTTCTGCGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp ATTTTCTGGTCCTCGGTGGCTGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTCACCTTCATCCCAGGG +
Preference number: 3 (lower is better)
Translates to: IFWSSVAVHRDL*TWSWQLTFIPG
Trigger: CCCTGGGATGAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGGACCAGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531270.5
3UTR-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGGTTAACTGGGCAGTaGTGGGGCACTGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGLTGQ*WGTGMR
Trigger: TCTCATTCCAGTGCCCCACAACTGCCCAGTTAACCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGGGGATGCGATGGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRGCDG*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LGTQMRSLTARIFTACRCRNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPTTYRA*SVKKHW
Trigger: CCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGT...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPLVGYF*GEHVSQ
Trigger: CTGGGACACATGCTCACCCAAAAAATAGCCTACCAG...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGACATCTGATCTTGGCTaGCCCAAGCTGGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILTSDLG*PKLAQA
Trigger: GGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTCTTTGTAATTCAATaGCTGCCCATGCCCTTAACC +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGFFVIQ*LPMPLT
Trigger: GGTTAAGGGCATGGGCAGCAATTGAATTACAAAGAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCACCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAAC +
Preference number: 3 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPPCYKP*PEANGN
Trigger: GTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGG...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGACCACACCAGAATGTaGTCCGACTTCAGGTCACAG +
Preference number: 3 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPDHTRM*SDFRSQ
Trigger: CTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSPLDSF*AIWSWW
Trigger: CCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp AGAGGGGTCAGGCTGCAGCCCCGGGCCAGCCAGCTCTaGTGTGTGACAGTCATTCCACAGGAATTACCTTCT +
Preference number: 3 (lower is better)
Translates to: RGVRLQPRASQL*CVTVIPQELPS
Trigger: AGAAGGTAATTCCTGTGGAATGACTGTCACACATCAGAGCTGGCTGGCCCGGGGCTGCAGCCTGACCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR TCA 72 bp GGTAGGGGTTCTGCCGTGCGTCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTGTGTGTGAGCACAGGT +
Preference number: 3 (lower is better)
Translates to: GRGSAVRLHPRC*TWTCWLCVSTG
Trigger: ACCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CACAGTGGCTTGAACCCACAACAGGGTCTTTGCATGTaGAAGGCCCTTGCACCCAGTGCCCTCAGAGCTCCA +
Preference number: 3 (lower is better)
Translates to: HSGLNPQQGLCM*KALAPSALRAP
Trigger: TGGAGCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGGGTTCAAGCCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp AGGCCATCTAGGCATATACGTGCAAGTCACAGGGGATaGGATGGCTTGGCTTGGGCTCAGAGGCCTGACGCA +
Preference number: 3 (lower is better)
Translates to: RPSRHIRASHRG*DGLAWAQRPDA
Trigger: TGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGCACGTATATGCCTAGATGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CCTGGGGGAGGAGGTTCTGGAGGAATGCCTGGCCGCTaGAGTTCAGGTGTTTGGAAGTTCTTGTGTGCTGGA +
Preference number: 3 (lower is better)
Translates to: PGGGGSGGMPGR*SSGVWKFLCAG
Trigger: TCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAACCTCCTCCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACCACGGCGTTTGGGGCC +
Preference number: 3 (lower is better)
Translates to: LSTRNLASIKSR*VPTTSTTAFGA
Trigger: GGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp AACTTGGCCAGGAACTGGAAGTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCCACCAGCAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: NLARNWKYCSSV*CVKPVPTSSIL
Trigger: CAGGATGCTGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTGGCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp TCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGGTaGCTCAGCATGGTGTCTGCCGGTACGTTAGCAAAG +
Preference number: 3 (lower is better)
Translates to: SEKFFMASVARR*LSMVSAGTLAK
Trigger: CTTTGCTAACGTACCGGCAGACACCATGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CACCTCCATGGCCTTCACTGGGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCTGAACTTGGACCTGTT +
Preference number: 3 (lower is better)
Translates to: HLHGLHWVGVLP*VFIRDAELGPV
Trigger: AACAGGTCCAAGTTCAGCATCGCGGATGAAGACGCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp AGGGCCTCTAGTGTAATTCCATCTGAGACCTGGGGATaGCAGGAAGGCCCGGCCCTGCTTTGTTTGACCCAG +
Preference number: 3 (lower is better)
Translates to: RASSVIPSETWG*QEGPALLCLTQ
Trigger: CTGGGTCAAACAAAGCAGGGCCGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAATTACACTAGAGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GCAAGCTCCTGGGGGAGGAGGTTCTGGAGGAATGCCTaGCCGCTGCAGTTCAGGTGTTTGGAAGTTCTTGTG +
Preference number: 3 (lower is better)
Translates to: ASSWGRRFWRNA*PLQFRCLEVLV
Trigger: CACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAACCTCCTCCCCCAGGAGCTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCCAGGCTGTCTCGCAGA +
Preference number: 3 (lower is better)
Translates to: PCRSTAHPLISH*GPCAGPRLSRR
Trigger: TCTGCGAGACAGCCTGGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp CGGGCGTATGTAGCATGTCTGAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAGAACTTGCTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: RAYVACLSPRSR*RKAHWKNLLGS
Trigger: GCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACTCAGACATGCTACATACGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TCTCGGGCTTTTAAGACGGCAATGACTCGGCCCCGCTaGGCGCCAGAATCCTTCTCCAGGCCAATGACGATA +
Preference number: 3 (lower is better)
Translates to: SRAFKTAMTRPR*APESFSRPMTI
Trigger: TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAGCCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCGGCCCTGCTTTGTTaGACCCAGCTCAGAACAGGA +
Preference number: 3 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPALLC*TQLRTG
Trigger: TCCTGTTCTGAGCTGGGTCAAACAAAGCAGGGCCGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAA +
Preference number: 3 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPCVPLG*LAVALK
Trigger: TTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTACTGGATTTGAAATaGGTGAGATGTTTCTTGGGC +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGLLDLK*VRCFLG
Trigger: GCCCAAGAAACATCTCACCAATTTCAAATCCAGTAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGACGGCGTTTGGGGCCTaGGCCTCGATGTTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: RLISIRAINLCQKPTGTKTAFGA*ASMLSS
Trigger: GCTGCTCAACATCGAGGCCAAGGCCCCAAACGCCGT...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCTCGCTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGSLCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCGA...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCTACATCACCAAGGAGTaGGCCTTGTCATCCAGGCAC +
Preference number: 3 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVYITKE*ALSSRH
Trigger: GTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTA...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp CATTATCCCCAGACAGCGAGTGGGTCTGGGAGGGACTaGGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACA +
Preference number: 3 (lower is better)
Translates to: HYPQTASGSGRD*ARAVVISAQKT
Trigger: TGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGATAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp CAGGGGATGCGATGGCTTGGCTTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCTGCTTTCAAACAAATG +
Preference number: 3 (lower is better)
Translates to: QGMRWLGLGSEA*RTVLQAAFKQM
Trigger: CATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp TCAGGCTGCAGCCCCGGGCCAGCCAGCTCTGATGTGTaGCAGTCATTCCACAGGAATTACCTTCTCTTGCGA +
Preference number: 3 (lower is better)
Translates to: SGCSPGPASSDV*QSFHRNYLLLR
Trigger: TCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTCACACATCAGAGCTGGCTGGCCCGGGGCTGCAGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR GCA 72 bp GACAGTCATTCCACAGGAATTACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCAGCTCCTCGTAGGACT +
Preference number: 3 (lower is better)
Translates to: DSHSTGITFSCE*KPPAGPAPRRT
Trigger: AGTCCTACGAGGAGCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGACTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
3UTR CCA 72 bp AGCGGGTGCACTCGGACTGTGTGCCTCTGGGCTTGCTaGCGGTGGCACTTAAAGGAACTCATTCATTCTCTG +
Preference number: 3 (lower is better)
Translates to: SGCTRTVCLWAC*RWHLKELIHSL
Trigger: CAGAGAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCACCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CCTTCTTCCCATTCCTCAGTCTCACATTGTACCTCCTaGTGCAGGCTGCAGGCCTCGCCAGCCTCAGTCAAA +
Preference number: 3 (lower is better)
Translates to: PSSHSSVSHCTS*CRLQASPASVK
Trigger: TTTGACTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGAGACTGAGGAATGGGAAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GCTAGCGGCTTGTACTATAGCACAGCCTGCCTTTGCTaGTGTGTGGCCATTAGGCCTGGTGGAACTGCCATC +
Preference number: 3 (lower is better)
Translates to: ASGLYYSTACLC*CVAIRPGGTAI
Trigger: GATGGCAGTTCCACCAGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGCCGCTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp AGCTGTCATTGGCGACGGGCAGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACTGCTCTTCCGTCTGCT +
Preference number: 3 (lower is better)
Translates to: SCHWRRAGRSQT*PGTGSTALPSA
Trigger: AGCAGACGGAAGAGCAGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCTGCCCGTCGCCAATGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TCATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCT +
Preference number: 3 (lower is better)
Translates to: SYMKVAKVGSFI*LTTDRASGRFS
Trigger: AGAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGCATGTGCAAGGCCCTaGCACCCAGTGCCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVACARP*HPVPSE
Trigger: CTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGCATTTATTATATCTaGGAGAACATTCCAGTCCAG +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCIYYI*ENIPVQ
Trigger: CTGGACTGGAATGTTCTCCAAGATATAATAAATGCA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGACTGTAGAGAGTGAGTaGAGCATAGTTTGTGATTTT +
Preference number: 3 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGTVESE*SIVCDF
Trigger: AAAATCACAAACTATGCTCAACTCACTCTCTACAGT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCATAGGCACGCAGCGTaGCAATCCTTTCCACACGGA +
Preference number: 3 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGHRHAA*QSFPHG
Trigger: TCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATG...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTCATAGGCACGCAGCGTaGCAATCCTTTCCACACGGA +
Preference number: 3 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVHRHAA*QSFPHG
Trigger: TCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATG...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp GGGATGAGGAGTAGGAGGACATGGAGCAGTAGTCAGTaGGTGATTCCTGGTGGATCAGGATCTGCGTGCCCA +
Preference number: 3 (lower is better)
Translates to: GMRSRRTWSSSQ*VIPGGSGSACP
Trigger: TGGGCACGCAGATCCTGATCCACCAGGAATCACTCACTGACTACTGCTCCATGTCCTCCTACTCCTCATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CTAAGCGGGTGCACTCGGACTGTGTGCCTCTGGGCTTaGTGGCGGTGGCACTTAAAGGAACTCATTCATTCT +
Preference number: 3 (lower is better)
Translates to: LSGCTRTVCLWA*WRWHLKELIHS
Trigger: AGAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCACCCGCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GGCCAAGCCACGAATTGCCCAACTGGGTGGTCCGGCTaGCCTGCTATCTCACTTGTTTGTGTGCTTATTGTC +
Preference number: 3 (lower is better)
Translates to: GQATNCPTGWSG*PAISLVCVLIV
Trigger: GACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CAGTCAAATGTAACGTTCCTAGGCCAAGCCACGAATTaGCCAACTGGGTGGTCCGGCTGCCCTGCTATCTCA +
Preference number: 3 (lower is better)
Translates to: QSNVTFLGQATN*PTGWSGCPAIS
Trigger: TGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCCTAGGAACGTTACATTTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp TCTTCCCATTCCTCAGTCTCACATTGTACCTCCTGGTaGAGGCTGCAGGCCTCGCCAGCCTCAGTCAAATGT +
Preference number: 3 (lower is better)
Translates to: SSHSSVSHCTSW*RLQASPASVKC
Trigger: ACATTTGACTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGAGACTGAGGAATGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GGCCCTTGCACCCAGTGCCCTCAGAGCTCCATGGAATaGCTTCTTCCCATTCCTCAGTCTCACATTGTACCT +
Preference number: 3 (lower is better)
Translates to: GPCTQCPQSSME*LLPIPQSHIVP
Trigger: AGGTACAATGTGAGACTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAAGCCAACGGGAACGAA +
Preference number: 3 (lower is better)
Translates to: LQVHLRQADQHP*YKPLPEANGNE
Trigger: TTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TGTAACGTTCCTAGGCCAAGCCACGAATTGCCCAACTaGGTGGTCCGGCTGCCCTGCTATCTCACTTGTTTG +
Preference number: 3 (lower is better)
Translates to: CNVPRPSHELPN*VVRLPCYLTCL
Trigger: CAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCCTAGGAACGTTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CCGCTGCAGTTCAGGTGTTTGGAAGTTCTTGTGTGCTaGAGATGTGGCTGGGGTTTGTCTCACAGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: PLQFRCLEVLVC*RCGWGLSHSGG
Trigger: GCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp TCTGGAGGAATGCCTGGCCGCTGCAGTTCAGGTGTTTaGAAGTTCTTGTGTGCTGGAGATGTGGCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: SGGMPGRCSSGV*KFLCAGDVAGV
Trigger: AACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGTTTCCCCTTCCTTTaGTCGGTGGAGAGGAATGTA +
Preference number: 3 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHSFPFL*SVERNV
Trigger: TACATTCCTCTCCACCGACAAAAGGAAGGGGAAACT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGGGGATGCGATGGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRGCDG*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCCATCGCATCCCCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAAGAGAAGGGAGAAATaGAAGTGTGGCGCCAAGATT +
Preference number: 3 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEKRREK*KCGAKI
Trigger: AATCTTGGCGCCACACTTCAATTTCTCCCTTCTCTT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTTGCAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: SCRSISARLISIRAINLCRNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...GCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CAA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: AILSTRNLASIKSRCVPTTTYRA*SVKKHW
Trigger: CCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGT...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTAGGGCGATCTCAAACTaGGCCAGGAACTGGAAGTAC +
Preference number: 3 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVRAISN*ARNWKY
Trigger: GTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCT...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGAAGTTCTTGAATTTTTaGATGTGGAAGCGCTTGACG +
Preference number: 3 (lower is better)
Translates to: RLGTQMRSLTARIFTACRKFLNF*MWKRLT
Trigger: CGTCAAGCGCTTCCACATCAAAAAATTCAAGAACTT...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTATGTTGATGTGCTCCTaGACGTCAAGGGACCACACC +
Preference number: 3 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVMLMCS*TSRDHT
Trigger: GGTGTGGTCCCTTGACGTCAAGGAGCACATCAACAT...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGACACGTTCTGGTGGGTaGTTTATGGATTTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWTRSGG*FMDFCS
Trigger: AGAGCAGAAATCCATAAACAACCCACCAGAACGTGT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR TCA 72 bp AAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTaGATGGTGTTGGCTGTGGGGTGCCGCATACCGTGG +
Preference number: 3 (lower is better)
Translates to: KPTGTKLILNTL*MVLAVGCRIPW
Trigger: CCACGGTATGCGGCACCCCACAGCCAACACCATTCAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp ATTCCTCAGTCTCACATTGTACCTCCTGGTGCAGGCTaGAGGCCTCGCCAGCCTCAGTCAAATGTAACGTTC +
Preference number: 3 (lower is better)
Translates to: IPQSHIVPPGAG*RPRQPQSNVTF
Trigger: GAACGTTACATTTGACTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGAGACTGAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CTTGGAGAACATTCCAGTCCAGCAGTTAGTGCTGCCTaGCTCTTTGACAGGCTGCAGAGGATGGCACTGTTG +
Preference number: 3 (lower is better)
Translates to: LGEHSSPAVSAA*LFDRLQRMALL
Trigger: CAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGCTGGACTGGAATGTTCTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp CATCTGGGCTTATATATGCGTGCAGGTCACAGGGGATaGGATGGCTTAGCTTGGGCTCAGAGGCCTGACATT +
Preference number: 3 (lower is better)
Translates to: HLGLYMRAGHRG*DGLAWAQRPDI
Trigger: AATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCGCATCCCCTGTGACCTGCACGCATATATAAGCCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTaGCACCACGGCAGCATCCACCAGCACCCGTGTGGG +
Preference number: 3 (lower is better)
Translates to: VFIFKGAHNSVL*HHGSIHQHPCG
Trigger: CCCACACGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR GCA 72 bp ATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTaGACATCCTCTGATTTCTCACTGGGGTCCGTGTGC +
Preference number: 3 (lower is better)
Translates to: MAVRTQSSMSKY*TSSDFSLGSVC
Trigger: GCACACGGACCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp GTGTACTCCTGGCCCTGGGATGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCATACATGAAGGTGGCA +
Preference number: 3 (lower is better)
Translates to: VYSWPWDEKKAV*FPQHSSYMKVA
Trigger: TGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAGTACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp GTCGGGGGATACAAGAGGAGGACACAAAGGAGGCTTTaGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: VGGYKRRTQRRL*IGKKGSNEVWL
Trigger: CAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGTCCTCCTCTTGTATCCCCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GGGGTGAACGTCAGGTGGATCAGAGAGATGCAGTCATaGGGGTCAGGTGTGGTATCAGGAATAATGTGGGAG +
Preference number: 3 (lower is better)
Translates to: GVNVRWIREMQS*GSGVVSGIMWE
Trigger: CTCCCACATTATTCCTGATACCACACCTGACCCCCATGACTGCATCTCTCTGATCCACCTGACGTTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp AGGCACGCAGCGTTGCAATCCTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGTGCGTCCCGACCACCA +
Preference number: 3 (lower is better)
Translates to: RHAALQSFPHGT*LQLNPGASRPP
Trigger: TGGTGGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp TCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAGGCTGTCTGCTTCCCA +
Preference number: 3 (lower is better)
Translates to: SSFPSQNTTVYS*PWDEKKAVCFP
Trigger: TGGGAAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCCGGCCCTGCTTTGTTaGACCCAGCTCAGAACAGGA +
Preference number: 3 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVPALLC*TQLRTG
Trigger: TCCTGTTCTGAGCTGGGTCAAACAAAGCAGGGCCGG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCGCGGAGACCCCCACTaGCAATTCTGTGTGCACAGT +
Preference number: 3 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVRGDPH*QFCVHS
Trigger: ACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGCG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTACCACCAAACAGGCTTaGTGTGAGCAACAAGGCTGT +
Preference number: 3 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFTTKQA*CEQQGC
Trigger: ACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCTCAGATAGCTTGATGTaGATGTGCTCCTTGACGTCA +
Preference number: 3 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVSDSLM*MCSLTS
Trigger: TGACGTCAAGGAGCACATCAACATCAAGCTATCTGA...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp AGCCACGAATTGCCCAACTGGGTGGTCCGGCTGCCCTaGTATCTCACTTGTTTGTGTGCTTATTGTCAACTC +
Preference number: 3 (lower is better)
Translates to: SHELPNWVVRLP*YLTCLCAYCQL
Trigger: GAGTTGACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp TTCAGTTACTTCAGGCCATCTGGGCTTATATATGCGTaGAGGTCACAGGGGATGCGATGGCTTAGCTTGGGC +
Preference number: 3 (lower is better)
Translates to: FSYFRPSGLIYA*RSQGMRWLSLG
Trigger: GCCCAAGCTAAGCCATCGCATCCCCTGTGACCTGCACGCATATATAAGCCCAGATGGCCTGAAGTAACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GCTTGTACTATAGCACAGCCTGCCTTTGCTGGTGTGTaGCCATTAGGCCTGGTGGAACTGCCATCCATAAAC +
Preference number: 3 (lower is better)
Translates to: ACTIAQPAFAGV*PLGLVELPSIN
Trigger: GTTTATGGATGGCAGTTCCACCAGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAGGCCCGGCCCTGCTTaGTTTGACCCAGCTCAGAAC +
Preference number: 3 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARPGPA*FDPAQN
Trigger: GTTCTGAGCTGGGTCAAACAAAGCAGGGCCGGGCCT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAAAAAGTGGCTATGTTaGCACATGTGTGTGCATATG +
Preference number: 3 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEKKWLC*HMCVHM
Trigger: CATATGCACACACATGTGCAAACATAGCCACTTTTT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGCCACAGCTTCGTTCTaGAAAGAATCTGTTTATTTT +
Preference number: 3 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYATASF*KESVYF
Trigger: AAAATAAACAGATTCTTTCAAGAACGAAGCTGTGGC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCAGCAACATTTTACTGTaGTGGAGACTGTTTCCCTGC +
Preference number: 3 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSSNILL*WRLFPC
Trigger: GCAGGGAAACAGTCTCCACAACAGTAAAATGTTGCT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTGTTTGTGTGCTTATaGTCAACTCTACCTATGAGG +
Preference number: 3 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELFVCL*STLPMR
Trigger: CCTCATAGGTAGAGTTGACAATAAGCACACAAACAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCACAGAGATAAGAGGTaGGGGCACAGAAATAAGGGA +
Preference number: 3 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPHRDKR*GHRNKG
Trigger: TCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGTG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTCAGATAGCTTGATGTaGATGTGCTCCTTGACGTCA +
Preference number: 3 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSSDSLM*MCSLTS
Trigger: TGACGTCAAGGAGCACATCAACATCAAGCTATCTGA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGCTTTCCACACGGAACTaGGCTTCAATTAAATCCAGG +
Preference number: 3 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRLSTRN*ASIKSR
Trigger: CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGAGGGCGATCTCAAACTaGGCCAGGAACTGGAAGTAC +
Preference number: 3 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGRAISN*ARNWKY
Trigger: GTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCT...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp ACACCAGAATGTTGTCCGACTTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGTAGGCCAGGCCCGAGG +
Preference number: 3 (lower is better)
Translates to: TPECCPTSGHRR*CFSCAGRPGPR
Trigger: CCTCGGGCCTGGCCTACCTGCACAAGAAAAACATCATCTTCTGTGACCTGAAGTCGGACAACATTCTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp AGAAGGCTGTCTGCTTCCCACAGCACAGTTCATACATaGAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: RRLSASHSTVHT*RWQKSGPSSGS
Trigger: TGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACAGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp GGTGGTCCGGCTGCCCTGCTATCTCACTTGTTTGTGTaGTTATTGTCAACTCTACCTATGAGGAGTGAGCTC +
Preference number: 3 (lower is better)
Translates to: GGPAALLSHLFV*LLSTLPMRSEL
Trigger: GAGCTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTTCTTTGTAATTCAATaGCTGCCCATGCCCTTAACC +
Preference number: 3 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFFFVIQ*LPMPLT
Trigger: GGTTAAGGGCATGGGCAGCAATTGAATTACAAAGAA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCACGGAGAGAAGGGGTaGGGGTCCTTGCCCATTCCC +
Preference number: 3 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHGEKG*GSLPIP
Trigger: GGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGTG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGATCTCATGTAAGTGTTaGAAGGTGATGTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRISCKC*KVMSGK
Trigger: CTTCCCAGACATCACCTTCAAACACTTACATGAGAT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp CTAGTCACGGAAGGAAACTGTAAGCCGGACCGGGTGTaGGGAGGGGAGGTGATAAAAAGATTATATGGTGGA +
Preference number: 3 (lower is better)
Translates to: LVTEGNCKPDRV*GGEVIKRLYGG
Trigger: TCCACCATATAATCTTTTTATCACCTCCCCTCCTCACACCCGGTCCGGCTTACAGTTTCCTTCCGTGACTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp GAGGTCTTCTGCTCTGATCACCCCATTCTTGGCCACTaGCCGAGAGCCCTTAATATTAAAGATCCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: EVFCSDHPILGH*PRALNIKDPLQ
Trigger: CTGCAGAGGATCTTTAATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAGAGCAGAAGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp CCTGCCTCTTTGACAGGCTGCAGAGGATGGCACTGTTaGATGTGCAGGAATTTTATGACCTCCCTCATGATA +
Preference number: 3 (lower is better)
Translates to: PASLTGCRGWHC*MCRNFMTSLMI
Trigger: TATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GCCACTGACCGAGAGCCCTTAATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAAATAGGGTCGAGGAAG +
Preference number: 3 (lower is better)
Translates to: ATDREPLILKIL*RHSESQIGSRK
Trigger: CTTCCTCGACCCTATTTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATATTAAGGGCTCTCGGTCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR GCA 72 bp TCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACGAAGCTCATCTTAAAT +
Preference number: 3 (lower is better)
Translates to: SARLISIRAINL*QKPTGTKLILN
Trigger: ATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CCA 72 bp AGGTGTTTGGAAGTTCTTGTGTGCTGGAGATGTGGCTaGGGTTTGTCTCACAGTGGAGGCAAGGAATTGCAA +
Preference number: 3 (lower is better)
Translates to: RCLEVLVCWRCG*GLSHSGGKELQ
Trigger: TTGCAATTCCTTGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GTTCAGGTGTTTGGAAGTTCTTGTGTGCTGGAGATGTaGCTGGGGTTTGTCTCACAGTGGAGGCAAGGAATT +
Preference number: 3 (lower is better)
Translates to: VQVFGSSCVLEM*LGFVSQWRQGI
Trigger: AATTCCTTGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp AGGATGCACTTGGACTTGGGGATCCCCTATGGGTCTTaGAAAGTTACATGGATTGACACGTTCTGGTGGGTT +
Preference number: 3 (lower is better)
Translates to: RMHLDLGIPYGS*KVTWIDTFWWV
Trigger: AACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCAGAGACATCTGATCTaGGCTTGCCCAAGCTGGCCC +
Preference number: 3 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGQRHLI*ACPSWP
Trigger: GGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAAAAAGTGGCTATGTTaGCACATGTGTGTGCATATG +
Preference number: 3 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFKKWLC*HMCVHM
Trigger: CATATGCACACACATGTGCAAACATAGCCACTTTTT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGCTATCTCACTTGTTaGTGTGCTTATTGTCAACTC +
Preference number: 3 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGCYLTC*CAYCQL
Trigger: GAGTTGACAATAAGCACACAAACAAGTGAGATAGCA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCAGTGGGGGAGCTTTTaGAGCCAGGATGAGCCAGGA +
Preference number: 3 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGQWGSF*SQDEPG
Trigger: TCCTGGCTCATCCTGGCTCAAAAAGCTCCCCCACTG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTTTCCACACGGAACTaGGCTTCAATTAAATCCAGG +
Preference number: 3 (lower is better)
Translates to: RLISIRAINLCQKPTGTKLSTRN*ASIKSR
Trigger: CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR TCA 72 bp GGTGAGATGTTTCTTGGGCTGGTTGGTCTGAGGACTTaGGGTTGTAGGTGGATCTTTCTCATGGACCAAAGA +
Preference number: 3 (lower is better)
Translates to: GEMFLGLVGLRT*GCRWIFLMDQR
Trigger: TCTTTGGTCCATGAGAAAGATCCACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAAGAAACATCTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GGCTTGGCTTGGGCTCAGAGGCCTGACGCACTGTGCTaGAAGCTGCTTTCAAACAAATGCATTTATTATATC +
Preference number: 3 (lower is better)
Translates to: GLAWAQRPDALC*KLLSNKCIYYI
Trigger: GATATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GATGGCTTGGCTTGGGCTCAGAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAACAAATGCATTTATTAT +
Preference number: 3 (lower is better)
Translates to: DGLAWAQRPDAL*CKLLSNKCIYY
Trigger: ATAATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GTAAGGTCAAGTTGTTTGGACAGAAGGTCTACAGGGTaGGGTCCTGGCTCTTGTGTAAGAATTCTGACTGCA +
Preference number: 3 (lower is better)
Translates to: VRSSCLDRRSTG*GPGSCVRILTA
Trigger: TGCAGTCAGAATTCTTACACAAGAGCCAGGACCGCACCCTGTAGACCTTCTGTCCAAACAACTTGACCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAA +
Preference number: 3 (lower is better)
Translates to: FGINPIQCDFTTRSLTAECVPLG*LAVALK
Trigger: TTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTAGTTTCCCCTTCCTTTaGTCGGTGGAGAGGAATGTA +
Preference number: 3 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCSFPFL*SVERNV
Trigger: TACATTCCTCTCCACCGACAAAAGGAAGGGGAAACT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGATCTCATGTAAGTGTTaGAAGGTGATGTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQISCKC*KVMSGK
Trigger: CTTCCCAGACATCACCTTCAAACACTTACATGAGAT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSERNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR TCA 72 bp AACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAGGCCCTTTCTGAAGTC +
Preference number: 3 (lower is better)
Translates to: NRACAPAASKFT*QSYKHKALSEV
Trigger: GACTTCAGAAAGGGCCTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp TATAGAGGTGGGAAGGCCAAACCGAGGAATTATGTTTaGCAGAAGGGAAGAAATGACCATGGTGGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: YRGGKAKPRNYV*QKGRNDHGGLL
Trigger: GAGAAGGCCACCATGGTCATTTCTTCCCTTCTGTCAAACATAATTCCTCGGTTTGGCCTTCCCACCTCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp GGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTaGCACGTTCTGGTGGGTTGTTTATGGATTTCTGCT +
Preference number: 3 (lower is better)
Translates to: GDPLWVLESYMD*HVLVGCLWISA
Trigger: AGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR GCA 72 bp TCTTTGACAGGCTGCAGAGGATGGCACTGTTGCATGTaGAGGAATTTTATGACCTCCCTCATGATAGAGGTT +
Preference number: 3 (lower is better)
Translates to: SLTGCRGWHCCM*RNFMTSLMIEV
Trigger: AACCTCTATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp AAGTTGTTTGGACAGAAGGTCTACAGGGTGCGGTCCTaGCTCTTGTGTAAGAATTCTGACTGCACTAACCAT +
Preference number: 3 (lower is better)
Translates to: KLFGQKVYRVRS*LLCKNSDCTNH
Trigger: ATGGTTAGTGCAGTCAGAATTCTTACACAAGAGCCAGGACCGCACCCTGTAGACCTTCTGTCCAAACAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTaGCGGTTTGGGGATAGCACCAGGAGATATCAGCTG +
Preference number: 3 (lower is better)
Translates to: PASKDYVFKSSE*RFGDSTRRYQL
Trigger: CAGCTGATATCTCCTGGTGCTATCCCCAAACCGCCACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTTGTTTGTGTGCTTATaGTCAACTCTACCTATGAGG +
Preference number: 3 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVLFVCL*STLPMR
Trigger: CCTCATAGGTAGAGTTGACAATAAGCACACAAACAA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR GCA 72 bp GGGGTTGCTTCCTGTTTGGGGCCATATTCTAAGAGATaGTATAGTGAACATCCTTGTTCTGTATCTTTGGGC +
Preference number: 3 (lower is better)
Translates to: GVASCLGPYSKR*YSEHPCSVSLG
Trigger: GCCCAAAGATACAGAACAAGGATGTTCACTATAGCATCTCTTAGAATATGGCCCCAAACAGGAAGCAACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp TCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTaGGTTTTTATATTTGATGAAAAAGAGCCTAAACGC +
Preference number: 3 (lower is better)
Translates to: SQGCCQTRHELG*VFIFDEKEPKR
Trigger: GCGTTTAGGCTCTTTTTCATCAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp TTTTACTGTTGTGGAGACTGTTTCCCTGCTGTTGGGTaGGGTCAAGCATTGATGTTTAAGGGTCTGTCTGTT +
Preference number: 3 (lower is better)
Translates to: FYCCGDCFPAVG*GQALMFKGLSV
Trigger: AACAGACAGACCCTTAAACATCAATGCTTGACCTCACCCAACAGCAGGGAAACAGTCTCCACAACAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp AGGAAAAATGGTAATTGTGGGAGACTCAATAAAGAGTaGGTACAGCTGAAGGAGCCGGGGAGCAGAAAGTAT +
Preference number: 3 (lower is better)
Translates to: RKNGNCGRLNKE*VQLKEPGSRKY
Trigger: ATACTTTCTGCTCCCCGGCTCCTTCAGCTGTACTCACTCTTTATTGAGTCTCCCACAATTACCATTTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp CAGCTGGAGTATGATCTCTCTTTCAAACTCCCATTCTaGTTTAAGGAGCCCCAAAGGGTAACTCTTGACAAA +
Preference number: 3 (lower is better)
Translates to: QLEYDLSFKLPF*FKEPQRVTLDK
Trigger: TTTGTCAAGAGTTACCCTTTGGGGCTCCTTAAACCAGAATGGGAGTTTGAAAGAGAGATCATACTCCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp AAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTaGGCTGGGTTTTTATATTTGATGAAAAAGAGCCTA +
Preference number: 3 (lower is better)
Translates to: KCLRVAAKRGMN*AGFLYLMKKSL
Trigger: TAGGCTCTTTTTCATCAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp GAGACTGTTTCCCTGCTGTTGGGTGAGGTCAAGCATTaGTGTTTAAGGGTCTGTCTGTTTCTTTGTAATTCA +
Preference number: 3 (lower is better)
Translates to: ETVSLLLGEVKH*CLRVCLFLCNS
Trigger: TGAATTACAAAGAAACAGACAGACCCTTAAACATCAATGCTTGACCTCACCCAACAGCAGGGAAACAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp TGCTTAAAAGAGTATTGTCTAAGTTGGCACCAGAGTTaGGGAGTTTTAAGAGGTTTAGAAGCCTGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: CLKEYCLSWHQS*GVLRGLEAWLS
Trigger: TGACAGCCAGGCTTCTAAACCTCTTAAAACTCCCCAACTCTGGTGCCAACTTAGACAATACTCTTTTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTaGGTTGTTTATGGATTTCTGCTCTTTGTAGAAACG +
Preference number: 3 (lower is better)
Translates to: GSWKVTWIDTFW*VVYGFLLFVET
Trigger: CGTTTCTACAAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAGCAACATTTTACTGTaGTGGAGACTGTTTCCCTGC +
Preference number: 3 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSSNILL*WRLFPC
Trigger: GCAGGGAAACAGTCTCCACAACAGTAAAATGTTGCT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGCTGCTTACTGGATTaGAAATTGGTGAGATGTTTC +
Preference number: 3 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGCLLD*KLVRCF
Trigger: GAAACATCTCACCAATTTCAAATCCAGTAAGCAGCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp GCACTTTTACCAAGATTTCAGGACCAAATACTTAAGTaGAACTGCTGGGTCAGAGGGTATGTGCATTTGAAA +
Preference number: 3 (lower is better)
Translates to: ALLPRFQDQILK*NCWVRGYVHLK
Trigger: TTTCAAATGCACATACCCTCTGACCCAGCAGTTCCACTTAAGTATTTGGTCCTGAAATCTTGGTAAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTTATGGAGTGAGGTATaGAGGATAGGAGAGTATATG +
Preference number: 3 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLWSEV*RIGEYM
Trigger: CATATACTCTCCTATCCTCAATACCTCACTCCATAA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CCA 72 bp TATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTaGTGGGTTGTTTATGGATTTCTGCTCTTTGTAGAA +
Preference number: 3 (lower is better)
Translates to: YGSWKVTWIDTF*WVVYGFLLFVE
Trigger: TTCTACAAAGAGCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CCA 72 bp AGAGATGCTATAGTGAACATCCTTGTTCTGTATCTTTaGGCACTTTTACCAAGATTTCAGGACCAAATACTT +
Preference number: 3 (lower is better)
Translates to: RDAIVNILVLYL*ALLPRFQDQIL
Trigger: AAGTATTTGGTCCTGAAATCTTGGTAAAAGTGCCCAAAGATACAGAACAAGGATGTTCACTATAGCATCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR TCA 72 bp TTAACCTGTTTGCCTTTCCGGTTTTCTGTTTCTTATTaGCATTACGAACTCTCTGTAATGAAGATAAGTGAG +
Preference number: 3 (lower is better)
Translates to: LTCLPFRFSVSY*HYELSVMKISE
Trigger: CTCACTTATCTTCATTACAGAGAGTTCGTAATGTCAATAAGAAACAGAAAACCGGAAAGGCAAACAGGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATCGGCTGCGGCGCTGCTaGTCTGCCAGCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHRLRRC*SASTAS
Trigger: GGAGGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCG...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGGCTTGAGGGGGACCTaGCAGCCTGGCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGGLRGT*QPGGVG
Trigger: CCCCACCCCGCCAGGCTGCCAGGTCCCCCTCAAGCC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
71% GC, longest homopolymer 6 nt, total homopolymer stretches 25 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCCTGGCCCAGGACGCTaGCCTCGTCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGPGPGR*PRPRCA
Trigger: AGCACAGCGAGGACGAGGGCAGCGTCCTGGGCCAGG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCCCTGGCCCAGGACGCTaGCCTCGTCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGPGPGR*PRPRCA
Trigger: AGCACAGCGAGGACGAGGGCAGCGTCCTGGGCCAGG...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCCTCCTGGTGCAGGCTaGAGGCCTCGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGPPGAG*RPRQPQ
Trigger: CTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAATCCAGGTGCGTCCCGACCACCAGCACCACGGCGTTTGGGGCCTTGGCCTCGTTGACGGCCACAGGCTaGCCCTGGTACCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KSRCVPTTSTTAFGALASLTATG*PWYRAR
Trigger: CCGGGCCCGGTACCAGGGCCAGCCTGTGGCCGTCAA...CGAGGCCAAGGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCGGCTTGAGGGGGACCTaGCAGCCTGGCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPGLRGT*QPGGVG
Trigger: CCCCACCCCGCCAGGCTGCCAGGTCCCCCTCAAGCC...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGGGCTTGAGGGGGACCTaGCAGCCTGGCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRGLRGT*QPGGVG
Trigger: CCCCACCCCGCCAGGCTGCCAGGTCCCCCTCAAGCC...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp ACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCCGGGGGTTCCGTGTCC +
Preference number: 4 (lower is better)
Translates to: TSAMESPSGTFG*AVWLAAGGSVS
Trigger: GGACACGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp TGCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTaGGGTTGGCCGTGTGGCTGGCTGCCGGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: CSRPRWSPPQAP*GWPCGWLPGVP
Trigger: CGGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATGTCTGGGGCAGGAGATaGAGTCCCGCTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHVWGRR*SPARWP
Trigger: CGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGAC...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATCCCAGCACTCCATCATaGGCGCCTGCAGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADPSTPS*APAVAG
Trigger: TCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGG...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCTGGAGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCCTTTTAAGACGGCAATaGCTCGGCCCCGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PGAGGGAAECQHIGTQRCLLRRQ*LGPAGR
Trigger: GCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAG...GCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCTCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHAALLL*QHGLLQ
Trigger: CTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGC...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGCACTTCCTCCGGCTaGCCCAGAACCGGGCGGATG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCTSSG*PRTGRM
Trigger: CATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADCSRRN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCA...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGCTGGGTTGTCATCCGTaGGCTCGGTGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRLGCHP*ARWAAP
Trigger: TGGAGCTGCCCACCGAGCCCACGGATGACAACCCAG...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTCGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRRCHHG*VVIRGL
Trigger: GAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCG...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGAIWSW*WPSAGR
Trigger: GCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHPLRHL*VGRVAG
Trigger: GCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGG...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGACAGCGAGTGGGTCTaGGAGGGACTGAGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGDSEWV*EGLSPC
Trigger: GCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTCAGGTCCACTTCTCTTaGGGTGGAAGTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AACPSGTARRRPGCGAAAQVHFS*GGSAAS
Trigger: GCTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTG...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCCCCAGCACTCCATCATaGGCGCCTGCAGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPPSTPS*APAVAG
Trigger: TCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGG...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGGCGGAGGTGGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGRRRWQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCCACCTCCGCCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCCCAGCTGCCAGAGGTTaGCCAGCTGCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPPAARG*PAAPAQ
Trigger: CTGAGCTGGGGCAGCTGGGCAACCTCTGGCAGCTGG...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCCAGGAGGGTGGACTTaGCCTGGCGCGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYPGGWT*PGAGDP
Trigger: TGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATGGCAGCCGATGGTGCTaGCCACGTCCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADGSRWC*PRPSCC
Trigger: GCAGCATGAAGGACGTGGGCAGCACCATCGGCTGCC...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGGCTGCGGCGCTGCTaGTCTGCCAGCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWRLRRC*SASTAS
Trigger: GGAGGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCCCGGCTGCGGCGCTaGTGCTCTGCCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSRLRR*CSASTA
Trigger: GGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGCCTGGCCCAGGACGCTaGCCTCGTCCTCGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRPGPGR*PRPRCA
Trigger: AGCACAGCGAGGACGAGGGCAGCGTCCTGGGCCAGG...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATACGATGCAGGGGTGCTaGAGCGCGTGCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHTMQGC*SACSML
Trigger: CAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGTCCACCAGCACCCCATaGGGAGTCAGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLSTSTP*GVSSRA
Trigger: AGCCCGAGAGCTGACTCCGCATGGGGTGCTGGTGGA...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGGTCACCGCCCCGCGTaGACGGCTTGCCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPGHRPA*TACRPC
Trigger: ACACGGGCGGCAAGCCGTCCACGCGGGGCGGTGACC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTCATCCGTGGGCTCGGTaGGCAGCTCCACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRHPWAR*AAPPVS
Trigger: AGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATG...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSQAPLG*PCGWLP
Trigger: CGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTG...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGACCGGGCCCGGTAGATaGCGGTGCCACTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWTGPGR*RCHCRP
Trigger: AGGGCGGCAGTGGCACCGTCATCTACCGGGCCCGGT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRGRHSR*QGGPAH
Trigger: ATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCC...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCTGTACGCGGCGCGGATaGCTTCCGTCCTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSCTRRG*LPSCGT
Trigger: GGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACA...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATGAAGCCGCTGGGGACTaGAGGGACCTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHEAAGD*RDLVRT
Trigger: AGTCCTTACCAGGTCCCTGCAGTCCCCAGCGGCTTC...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCGAAGCCGCTGGGGACTaGAGGGACCTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGEAAGD*RDLVRT
Trigger: AGTCCTTACCAGGTCCCTGCAGTCCCCAGCGGCTTC...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCATCCGGGTCAGCCCCGTaGGTCAGGACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSSGSAP*VRTRSF
Trigger: GAAGCTCCTGGTCCTGACGCACGGGGCTGACCCGGA...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATCTCTTGAGGTGGAAGTaGCGCCAGCTGGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHLLRWK*RQLVPL
Trigger: CAGGGGAACCAGCTGGCGGCACTTCCACCTCAAGAG...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGGGGGGAGCGGCAGAGTaGCAGCACATAGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: RLGTQMRSLTARIFTACRGGAAE*QHIGTQ
Trigger: CTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCC...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGGGATCAGCCGCCCTaGCAGTCGCTGGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAGDQPP*QSLAAD
Trigger: ATCGGCTGCCAGCGACTGGCAGGGCGGCTGATCCCC...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCGGCTGCGGCGCTGCTaGTCTGCCAGCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRLRRC*SASTAS
Trigger: GGAGGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATACGTCGTCGTCCCGGCTaGGGCGCTGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIRRRPG*GAAALP
Trigger: TGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACG...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGCTCTTCCGTCTGCTaGGTGAAGCCAGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCSSVC*VKPVPT
Trigger: GGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPCSRRN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAGRVAG*RGFRVQ
Trigger: TTGGACACGGAACCCCCGGCAGCCAGCCACACGGCC...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGGTCACCGCCCCGCGTaGACGGCTTGCCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHGHRPA*TACRPC
Trigger: ACACGGGCGGCAAGCCGTCCACGCGGGGCGGTGACC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CCTGGAGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCGGGATGCTCAGAAGCTaGCCCTTTTCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PGAGGGAAECQHIGTQRCGMLRS*PFSSWD
Trigger: GTCCCAGCTGGAAAAGGGCCAGCTTCTGAGCATCCC...GCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGCCCAGGTGCCCTCGCTaGCAAGCCAAGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RLGTQMRSLTARIFTACRPRCPR*QAKASI
Trigger: GATGCTGGCCTTGGCTTGCCAGCGAGGGCACCTGGG...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGLSSQN*RLATAS
Trigger: GGAGGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACGGAAGCCTGTGGCCCTaGAGCCGGAGGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHGSLWP*SRRGSG
Trigger: GCCGCTCCCCCTCCGGCTCCAGGGCCACAGGCTTCC...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGCGCCCTGCCAGTCGCTaGCAGCCGATGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQRPASR*QPMVLP
Trigger: GGGCAGCACCATCGGCTGCCAGCGACTGGCAGGGCG...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGGGTGCCGCATACCGTaGGTGTCCAGGCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLGCRIP*VSRPGL
Trigger: TAAACCTGGCCTGGACACCCACGGTATGCGGCACCC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCGGGTGCCGCATACCGTaGGTGTCCAGGCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGGCRIP*VSRPGL
Trigger: TAAACCTGGCCTGGACACCCACGGTATGCGGCACCC...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGTGCCACTGCCGCCCTaGCCCAGGACGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQVPLPP*PRTLPS
Trigger: CGAGGGCAGCGTCCTGGGCCAGGGCGGCAGTGGCAC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGAKQSG*MLMPMS
Trigger: GCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AAATCCAGGTGCGTCCCGACCACCAGCACCACGGCGTTTGGGGCCTTGGCCTCGTGCTCACGTCCGCGATaGAGTCCCCCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: KSRCVPTTSTTAFGALASCSRPR*SPPQAP
Trigger: AGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA...CGAGGCCAAGGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp TGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPRTGRMPLDSF*AIWSWWWPSAG
Trigger: CCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCCTCCTGGCCCTGGGATaGGAAGAAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGLLALG*EEGCLL
Trigger: AAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAG...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCCCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSPQSRC*PPPWPS
Trigger: TGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGG...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGRHSR*QGGPAH
Trigger: ATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSGRHSR*QGGPAH
Trigger: ATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCC...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGGATGCCTTCCGTCCTaGGGGACCGCGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPGCLPS*GTALQG
Trigger: ACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGTCTGCTCCACCAGCTaGTCCAGCTGCCTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSVCSTS*SSCLSV
Trigger: GACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGAC...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLYCSSV*CVKPVP
Trigger: GGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTA...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTCAGGGACCAGCTCCTaGAGCGGCACGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHSGTSS*SGTGRS
Trigger: GGACCTCCCCGTGCCGCTGCAGGAGCTGGTCCCTGA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATCGCTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADRCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCG...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACA +
Preference number: 4 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPSCPLG*PAPRET
Trigger: TGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCT...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGVGVLP*VFIRDA
Trigger: AGCATCGCGGATGAAGACGCACGGCAGAACCCCTAC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLVGVLP*VFIRDA
Trigger: AGCATCGCGGATGAAGACGCACGGCAGAACCCCTAC...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTAGGGCTCCAGCCGCCTaGAGATCTCCAGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGARAPAA*RSPGRH
Trigger: GTGCCTCCCTGGAGATCTGCAGGCGGCTGGAGCCCT...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGAGCTGGGACGCGCACTaGTCGCAGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQSWDAH*SQASSS
Trigger: GCTGGAGGAGGCCTGCGACCAGTGCGCGTCCCAGCT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGTGGCCCTTTTCCAGCTaGGACGCGCACTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRWPFSS*DAHWSQ
Trigger: CTGCGACCAGTGCGCGTCCCAGCTGGAAAAGGGCCA...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGGGGTCGCCAGGCAGTTaGCAGAAAGGTCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRGSPGS*QKGRAP
Trigger: CGGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCC...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGAGCCAGCCGGCCTCTaGAGCTCCCACTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYEPAGL*SSHLVV
Trigger: GACCACCAAGTGGGAGCTCCAGAGGCCGGCTGGCTC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCGCTGGCAGCCGATaGTGCTGCCCACGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPVAGSR*CCPRPS
Trigger: TGAAGGACGTGGGCAGCACCATCGGCTGCCAGCGAC...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCCGGAGAAGTTCTTCATaGCATCGGTGGCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGRRSSS*HRWPAG
Trigger: ACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCG...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AACPSGTARRRPGCGAAATTVYS*PWDEKK
Trigger: CTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGT...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATAGGGATCTCTGGACCTaGAGCTGGCAGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHRDLWT*SWQLTF
Trigger: GAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGAGCAGCTGTCCTTTaGGGTGCCCCGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGAAVL*GAPHHG
Trigger: CCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIGWPCG*LPGVPC
Trigger: ACACGGAACCCCCGGCAGCCAGCCACACGGCCAACC...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLGWPCG*LPGVPC
Trigger: ACACGGAACCCCCGGCAGCCAGCCACACGGCCAACC...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSQAPLG*PCGWLP
Trigger: CGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTG...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACAACTTGCTGGGGAGCTaGGGAGGCTTGAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHNLLGS*GGLRGT
Trigger: GGTCCCCCTCAAGCCTCCCCAGCTCCCCAGCAAGTT...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp ACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATCTGGAGCTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSSGCPRTGRMP*DSFLAIWSWWW
Trigger: CCACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCGGCGCCCTCATGGAATaGCTGCCTCGAAATCCCGTA +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSGALME*LPRNPV
Trigger: TACGGGATTTCGAGGCAGTCATTCCATGAGGGCGCC...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQCRALS*QQLVEH
Trigger: GTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCA...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCCCAGCACTCCATCATaGGCGCCTGCAGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWPSTPS*APAVAG
Trigger: TCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCCCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSPVGCV*AQVGAA
Trigger: AGCTGCTCCTACCTGTGCTCACACACAGCCAACAGG...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAATGGGGGCTGTCTGTaGAGCTTTGGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGNGGCL*SFGAVQ
Trigger: CTGTACTGCCCCAAAGCTTCACAGACAGCCCCCATT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTGTACGCGGCGCGGATaGCTTCCGTCCTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHCTRRG*LPSCGT
Trigger: GGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACTTCACAACCCCCAGGTaGCCTCGCTGGCAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHFTTPR*PRWQAK
Trigger: CTTGGCTTGCCAGCGAGGGCACCTGGGGGTTGTGAA...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTTCACAACCCCCAGGTaGCCTCGCTGGCAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPFTTPR*PRWQAK
Trigger: CTTGGCTTGCCAGCGAGGGCACCTGGGGGTTGTGAA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGCTCTTGAGGTGGAAGTaGCGCCAGCTGGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQLLRWK*RQLVPL
Trigger: CAGGGGAACCAGCTGGCGGCACTTCCACCTCAAGAG...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGGGGATCAGCCGCCCTaGCAGTCGCTGGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: KVHTTVSFATTAASTSTPGDQPP*QSLAAD
Trigger: ATCGGCTGCCAGCGACTGGCAGGGCGGCTGATCCCC...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGGQGTY*SMSGVP
Trigger: CGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCC...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPSCPLG*PAPRET
Trigger: TGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCT...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGTGAATTTTGGTGCCTaGAAAGCAGCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGVNFGA*KAAWPR
Trigger: GCGAGGCCAGGCTGCTTTGCAGGCACCAAAATTCAC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCAGGGTCTTTGCATGTaGAAGGCCCTTGCACCCAGT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGQGLCM*KALAPS
Trigger: ACTGGGTGCAAGGGCCTTGCACATGCAAAGACCCTG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCCAGTTCAGAAGCCGCTaGGGACTGCAGGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPQFRSR*GLQGPG
Trigger: ACCAGGTCCCTGCAGTCCCCAGCGGCTTCTGAACTG...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACAGGGTGGACTTGCCCTaGCGCGGGGGACCCACGATG +
Preference number: 4 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHRVDLP*RGGPTM
Trigger: CATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCT...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGAGATCTCCAGGAGGGTaGACTTGCCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWRSPGG*TCPGAG
Trigger: CCCCGCGCCAGGGCAAGTCCACCCTCCTGGAGATCT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRLSSQN*RLATAS
Trigger: GGAGGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAA...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGGAAGCCTGTGGCCCTaGAGCCGGAGGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSGSLWP*SRRGSG
Trigger: GCCGCTCCCCCTCCGGCTCCAGGGCCACAGGCTTCC...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCGGAGGTAGCTGTCATTaGCGACGGGCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPGGSCH*RRAGRS
Trigger: AGATCGCCCTGCCCGTCGCCAATGACAGCTACCTCC...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGGTGCCACTGCCGCCCTaGCCCAGGACGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRVPLPP*PRTLPS
Trigger: CGAGGGCAGCGTCCTGGGCCAGGGCGGCAGTGGCAC...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGTTGACGGCCACAGGCTaGCCCTGGTACCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMLTATG*PWYRAR
Trigger: CCGGGCCCGGTACCAGGGCCAGCCTGTGGCCGTCAA...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPIAKQSG*MLMPMS
Trigger: GCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGGAGCAGCTGTCCTTTaGGGTGCCCCGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQGAAVL*GAPHHG
Trigger: CCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGACAGCTGGTAGGTGGTaGAGTGGTACATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRTAGRW*SGTSPR
Trigger: CCTTGGTGATGTACCACTCCACCACCTACCAGCTGT...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCTGGAGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCTGGAGAAAGGCACACTaGAAGAACTTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGAGGGAAECQHIGTQRCWRKAH*KNLLGS
Trigger: GCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCA...GCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGSPRSR*RKAHWK
Trigger: CTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACT...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCAGGTCTCCCCGTCCATaGGGGTCAGGTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPRSPRP*GSGHAQ
Trigger: CTGAGCATGACCTGACCCCCATGGACGGGGAGACCT...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINTACRC*LKVSPS
Trigger: GGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGT...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCGGACTGTGTGCCTCTaGGCTTGCTGGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRTVCL*ACWRWH
Trigger: GTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGGACTGTGTGCCTCTaGGCTTGCTGGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWRTVCL*ACWRWH
Trigger: GTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGGCCACCTGCATGTTaGCACAGTGGGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGPPAC*HSGQGG
Trigger: CCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCAAAAGCTTGGGGCCTaGGGCAGATGGAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGQKLGA*GRWNLA
Trigger: AGCCAGATTCCATCTGCCCCAGGCCCCAAGCTTTTG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGAAGGAGATGCTGGCTaGTTACCACCCTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGEGDAG*LPPSAN
Trigger: GTTGGCAGAGGGTGGTAACCAGCCAGCATCTCCTTC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGACCTAGCTCGGCCTaGCAAGGAGCAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGPSSA*QGAAWG
Trigger: TCCCCAGGCTGCTCCTTGCCAGGCCGAGCTAGGTCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGGCQVS*TVRFPV
Trigger: CACTGGAAATCGGACTGTCCAACTCACCTGGCAGCC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGCCACGGACTCAACCCTaGCGCGGGGGACCCACGATG +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAPRTQP*RGGPTM
Trigger: CATCGTGGGTCCCCCGCGCCAGGGTTGAGTCCGTGG...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS-3UTR TCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGAAAGGTCGAGCTCCGTaGTCTGGCAGGAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLKGRAP*SGRRCL
Trigger: TAGACATCTCCTGCCAGATCACGGAGCTCGACCTTT...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCAAAGGTCGAGCTCCGTaGTCTGGCAGGAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: DADERHDAGVLQRVQHAGKGRAP*SGRRCL
Trigger: TAGACATCTCCTGCCAGATCACGGAGCTCGACCTTT...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCGATGATTTCGTCCGATaGCTGCACGCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPDDFVR*LHARQL
Trigger: GAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATC...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCTGCAGGCACATTGCTaGTGGTCAGGTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGLQAHC*WSGLQC
Trigger: ACACTGAAGACCTGACCATCAGCAATGTGCCTGCAG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTCCTTGGCCTCGATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPIPWPRC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGG...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCCCTTGGCCTCGATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPPWPRC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGG...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCACTTCCGTCTGCTGCGTaGAGCCAGTCCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPLPSAA*SQSPPA
Trigger: TGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAG...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTACCGGGCCCGGTAGATaGCGGTGCCACTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFTGPGR*RCHCRP
Trigger: AGGGCGGCAGTGGCACCGTCATCTACCGGGCCCGGT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYPQSRC*PPPWPS
Trigger: TGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCCTGCTCCTGCAAACTaGTGGGGGAGGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWPAPAN*WGRPEE
Trigger: CTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTGTGGGAGGCTGGATTaGAGTCGGTGCCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGCGRLD*SRCQEK
Trigger: TTTTTCCTGGCACCGACTTCAATCCAGCCTCCCACA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAGCAGAAAGCTTTCTTaGTCTGAGGCGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYSRKLS*SEAAAG
Trigger: CCCCGCCGCCGCCTCAGAGCAAGAAAGCTTTCTGCT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGAAGCCGCTGGGGACTaGAGGGACCTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYEAAGD*RDLVRT
Trigger: AGTCCTTACCAGGTCCCTGCAGTCCCCAGCGGCTTC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTTCACAACCCCCAGGTaGCCTCGCTGGCAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYFTTPR*PRWQAK
Trigger: CTTGGCTTGCCAGCGAGGGCACCTGGGGGTTGTGAA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATTCCAGGGTTTTGAGCTaGCTGCAGGTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHSRVLS*LQVHFS
Trigger: AGAGAAGTGGACCTGCAGGCAGCTCAAAACCCTGGA...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTTCCAGCACACTTGCTaGCTCAGTCCCGGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYFQHTC*LSPGAL
Trigger: CAGCGCTCCGGGACTGAGGCAGCAAGTGTGCTGGAA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTTCTTCAGTGTCCAGCTaGCAGAGGTTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPISSVSS*QRLPSC
Trigger: GCAGCTGGGCAACCTCTGGCAGCTGGACACTGAAGA...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRSIKSR*VPTTST
Trigger: GGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGA...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGCTGGCAGCCGATGGTaGTGCCCACGTCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQAGSRW*CPRPSC
Trigger: GCATGAAGGACGTGGGCAGCACCATCGGCTGCCAGC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCGTCGTCGTCCCGGCTaGGGCGCTGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRRRPG*GAAALP
Trigger: TGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTGTCCGTCAGGTACTaGACGTCGTCGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELSVRY*TSSSRL
Trigger: CAGCCGGGACGACGACGTGCAGTACCTGACGGACAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCTGTCCGTCAGGTACTaGACGTCGTCGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWLSVRY*TSSSRL
Trigger: CAGCCGGGACGACGACGTGCAGTACCTGACGGACAG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCTCGTTGTCGGGCGTCTaGTCCACCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLSLSGV*STSCSS
Trigger: GCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGA...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRYCSSV*CVKPVP
Trigger: GGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTA...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAACGATGCAGGGGTGCTaGAGCGCGTGCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTITMQGC*SACSML
Trigger: CAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGT...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGCCACGATGCAGGGGTaGTGCAGCGCGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHATMQG*CSACSM
Trigger: CATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGTGCACTTCCTCCGGCTaGCCCAGAACCGGGCGGATG +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSACTSSG*PRTGRM
Trigger: CATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCA...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQCSRRN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCA...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHSIMSA*SRRNCT
Trigger: AGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGA...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHMGVRS*SDLSEA
Trigger: TGCCTCCGACAGGTCTGAGCATGACCTGACCCCCAT...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCTGCACCCCTGCTCCTaGAAACTGATGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWLHPCS*KLMGEA
Trigger: GGCCTCCCCCATCAGTTTGCAGGAGCAGGGGTGCAG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGCCCTTGCACCCAGTaGCCTCAGAGCTCCATGGAA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGPCTQ*PQSSME
Trigger: TTCCATGGAGCTCTGAGGGCACTGGGTGCAAGGGCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGAAAGGGGTCGGGGTaGAGAGATACGAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGKGSG*RDTRSG
Trigger: TCCCGACCTCGTATCTCTGCACCCCGACCCCTTTCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGGCCCTTTTCCAGCTaGGACGCGCACTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHWPFSS*DAHWSQ
Trigger: CTGCGACCAGTGCGCGTCCCAGCTGGAAAAGGGCCA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCCGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVRCHHG*VVIRGL
Trigger: GAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCG...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGCCCAGGTGCCCTCGCTaGCAAGCCAAGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQPRCPR*QAKASI
Trigger: GATGCTGGCCTTGGCTTGCCAGCGAGGGCACCTGGG...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTAATCCAGGAGGGAGGTaGGACAACTTGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AACPSGTARRRPGCGAAANPGGR*DNLLLE
Trigger: TTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATT...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGCACCACGGCGTTTaGGGCCTTGGCCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSQHHGV*GLGLDV
Trigger: AACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTG...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGGAAGCCTGTGGCCCTaGAGCCGGAGGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWGSLWP*SRRGSG
Trigger: GCCGCTCCCCCTCCGGCTCCAGGGCCACAGGCTTCC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTAGGTTCCTCAGGCCGTaGCTGGTGTCCGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGARFLRP*LVSGKW
Trigger: CCATTTCCCGGACACCAGCCACGGCCTGAGGAACCT...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGAGGTAGCTGTCATTaGCGACGGGCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGGSCH*RRAGRS
Trigger: AGATCGCCCTGCCCGTCGCCAATGACAGCTACCTCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPVLLHE*RPVALC
Trigger: ACAGAGAGCGACGGGACGCCACTCATGGAGCAGTAC...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPAIWSW*WPSAGR
Trigger: GCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGC...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHPWTAS*QSGAGG
Trigger: ACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGG...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGTQMRSLTARIFTACRCVHRDL*TWSWQL
Trigger: GAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGAC...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCGGAGCAGCTGTCCTTTaGGGTGCCCCGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLGAAVL*GAPHHG
Trigger: CCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCACTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPALHGLH*VGVLPC
Trigger: GCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAG...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHFGLAV*LAAGGS
Trigger: GGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVPLRHL*VGRVAG
Trigger: GCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGG...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTGCTCACGTCCGCGATaGAGTCCCCCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWCSRPR*SPPQAP
Trigger: AGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACTCGGCCCCGCTaGGCGCCAGAATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPMTRPR*APESFS
Trigger: GGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCAT...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCAGCGTCTCCACCCATaGAAGCTGCTCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHQRLHP*KLLRGH
Trigger: GTGGCCCCTGAGCAGCTTCCATGGGTGGAGACGCTG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAGCCGCTGTTGACCACC +
Preference number: 4 (lower is better)
Translates to: REAQSMTRRPGP*LYQTSEPLLTT
Trigger: GGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCGGCGACCTCTGGTGGTaGAAAAGGCAATACGCTTCG +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPGDLWW*KRQYAS
Trigger: CGAAGCGTATTGCCTTTTTCACCACCAGAGGTCGCC...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGAGGAAGCTGATGGCTaGCTGCAGGTCCTCGTAGTC +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAEEADG*LQVLVV
Trigger: GACTACGAGGACCTGCAGTCAGCCATCAGCTTCCTC...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATAGGGCGGGAAACCACTaGTCAATCAAGGAATTGACG +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADRAGNH*SIKELT
Trigger: CGTCAATTCCTTGATTGATCAGTGGTTTCCCGCCCT...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPLHPRC*TWTCWL
Trigger: CAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAG...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATGCAGTAGTCAGTGAGTaGTTCCTGGTGGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADAVVSE*FLVDQD
Trigger: ATCCTGATCCACCAGGAATCACTCACTGACTACTGC...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGCAGTAGTCAGTGAGTaGTTCCTGGTGGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGAVVSE*FLVDQD
Trigger: ATCCTGATCCACCAGGAATCACTCACTGACTACTGC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGGCGGAGGTGGCAGTaGGCTGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRRRWQ*AEIAPL
Trigger: CAATGGCGCGATCTCAGCTCACTGCCACCTCCGCCT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTGCTGCCTGCCTCTTTaGCAGGCTGCAGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEECCLPL*QAAEDG
Trigger: GCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACAGGATGCCTTCCGTCCTaGGGGACCGCGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KSRSMAVRTQSSMSKYCTGCLPS*GTALQG
Trigger: ACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCC...TGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATTTTTTCCCGGATAACTaGTGGGCAAGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHFFPDN*WARDWL
Trigger: AAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAA...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCAGCTGCCAGAGGTTaGCCAGCTGCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLPAARG*PAAPAQ
Trigger: CTGAGCTGGGGCAGCTGGGCAACCTCTGGCAGCTGG...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGGCAGCCGATGGTGCTaGCCACGTCCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: KVHTTVSFATTAASTSTPGSRWC*PRPSCC
Trigger: GCAGCATGAAGGACGTGGGCAGCACCATCGGCTGCC...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGTGTTGGCTGTGGGGTaGCGCATACCGTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KVHTTVSFATTAASTSTPVLAVG*RIPWVS
Trigger: GGACACCCACGGTATGCGGCACCCCACAGCCAACAC...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCGTGTTGGCTGTGGGGTaGCGCATACCGTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVVLAVG*RIPWVS
Trigger: GGACACCCACGGTATGCGGCACCCCACAGCCAACAC...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGCGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACG +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLRAINL*QKPTGT
Trigger: CGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCTCAGGGACCAGCTCCTaGAGCGGCACGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGSGTSS*SGTGRS
Trigger: GGACCTCCCCGTGCCGCTGCAGGAGCTGGTCCCTGA...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATTCAGGGACCAGCTCCTaGAGCGGCACGGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDSGTSS*SGTGRS
Trigger: GGACCTCCCCGTGCCGCTGCAGGAGCTGGTCCCTGA...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGCCSA*SMLASC
Trigger: GCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDGCCSA*SMLASC
Trigger: GCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCC...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGCCACGATGCAGGGGTaGTGCAGCGCGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMATMQG*CSACSM
Trigger: CATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGC...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATCCTGGTAGCCAGGAGTaGCCTCCACGCCTAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDPGSQE*PPRLGR
Trigger: GCGCCCTAGGCGTGGAGGGCACTCCTGGCTACCAGG...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCCAGAACCGGGCGGATaGCCTTGGACAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEPEPGG*PWTASW
Trigger: CCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGGGAGGCCCGGCCCATTaGTGTACCAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAGGPAH*CTRPQS
Trigger: GCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCC...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACGRVAG*RGFRVQ
Trigger: TTGGACACGGAACCCCCGGCAGCCAGCCACACGGCC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAGGATCTTCACGGCCTaGAGGTGCTGGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYRIFTA*RCWLKV
Trigger: GACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCTCCACCAGCACCCCATaGGGAGTCAGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPSTSTP*GVSSRA
Trigger: AGCCCGAGAGCTGACTCCGCATGGGGTGCTGGTGGA...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGGGCAAGGAGGGGCTaGCCATTATCCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHWARRG*PLSPDS
Trigger: GCTGTCTGGGGATAATGGGCAGCCCCTCCTTGCCCA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGCTCAGGGGCCACCTaGATGTTGGCACAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHCSGAT*MLAQWA
Trigger: TGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGCA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGATGGAATCTGGCTTaGATCTGGGGGTTAACTGGG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGRWNLA*IWGLTG
Trigger: CCCAGTTAACCCCCAGATGCAAGCCAGATTCCATCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGCAAGTCACAGGGGATaGGATGGCTTGGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYASHRG*DGLAWA
Trigger: AGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGAGGAATCCTGGGCTaGAGGCATTCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGGILG*RHSLAW
Trigger: CCAGGCCAAGGAATGCCTGCAGCCCAGGATTCCTCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCACTGCCACTGCCGCTaGCTGTGGGGTGCATTAAGG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEHCHCR*LWGALR
Trigger: CCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAGCTGGGACGCGCACTaGTCGCAGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILSWDAH*SQASSS
Trigger: GCTGGAGGAGGCCTGCGACCAGTGCGCGTCCCAGCT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCCATCCGTGGGCTCGGTaGGCAGCTCCACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVHPWAR*AAPPVS
Trigger: AGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATG...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATCAGTTCAGAAGCCGCTaGGGACTGCAGGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINQFRSR*GLQGPG
Trigger: ACCAGGTCCCTGCAGTCCCCAGCGGCTTCTGAACTG...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGGGGTCGCCAGGCAGTTaGCAGAAAGGTCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAGSPGS*QKGRAP
Trigger: CGGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCC...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGAATCCAGGAGGGAGGTaGGACAACTTGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLNPGGR*DNLLLE
Trigger: TTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATT...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCTCAGTCCCGGAGCGCTaGCGACCTCTGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLSVPER*RPLVVK
Trigger: TTTCACCACCAGAGGTCGCCAGCGCTCCGGGACTGA...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGTCGCTGGCAGCCGATaGTGCTGCCCACGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPVAGSR*CCPRPS
Trigger: TGAAGGACGTGGGCAGCACCATCGGCTGCCAGCGAC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCGCCCTGCCAGTCGCTaGCAGCCGATGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRPASR*QPMVLP
Trigger: GGGCAGCACCATCGGCTGCCAGCGACTGGCAGGGCG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCGGCTCAGGTAGCTCCTaGGGATCAGCCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLGSGSS*GSAALP
Trigger: TGGCAGGGCGGCTGATCCCCAGGAGCTACCTGAGCC...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINSSWHR*PAGASA
Trigger: TGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGA...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCGCGCGTGCAGCATGCTaGCCTCCTGCCGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPARAAC*PPAGTR
Trigger: CCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGC...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCGCGTGCAGCATGCTaGCCTCCTGCCGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQARAAC*PPAGTR
Trigger: CCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGGCGAAGCAGAGCGGGTaGATGCTGATGCCGATGAGC +
Preference number: 4 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGAKQSG*MLMPMS
Trigger: GCTCATCGGCATCAGCATCCACCCGCTCTGCTTCGC...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCACCTAGGGCGCCCTCATaGAATGACTGCCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSPRAPS*NDCLEI
Trigger: GATTTCGAGGCAGTCATTCCATGAGGGCGCCCTAGG...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSSFLAI*SWWWPS
Trigger: ACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCT...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSPGGCP*TASWQS
Trigger: AGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGG...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCAGCGGTCGCTTCTCTaGCTTAGTGTCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYQRSLL*LSVPAL
Trigger: GAGTGCTGGGACACTAAGCCAGAGAAGCGACCGCTG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINVHRDL*TWSWQL
Trigger: GAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGAC...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCTGCTCACGTCCGCGATaGAGTCCCCCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPCSRPR*SPPQAP
Trigger: AGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTTGTCTTCTAGGTCCTTaGAGAACTAGAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRCLLGP*RTRGRW
Trigger: CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACA...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTGCCTCTGGGCTTGCTaGCGGTGGCACTTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPCLWAC*RWHLKE
Trigger: TTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGGGCCTGGGGCAGATaGAATCTGGCTTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGAWGR*NLACIW
Trigger: CCAGATGCAAGCCAGATTCCATCTGCCCCAGGCCCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGCACGAATTGCCCAACTaGGTGGTCCGGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPHELPN*VVRLPC
Trigger: GCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTG...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTGCGATGGCTTGGCTTaGGCTCAGAGGCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEECDGLA*AQRPDA
Trigger: TGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTCTTGGGGATCCCCTATaGGTCTTGGAAAGTTACATG +
Preference number: 4 (lower is better)
Translates to: AACPSGTARRRPGCGAAALGDPL*VLESYM
Trigger: CATGTAACTTTCCAAGACCCATAGGGGATCCCCAAG...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 72 bp ACACGGAGACCTTCCCGAACACAGAGACATCTGATCTaGGCTTGCCCAAGCTGGCCCAGGCCTCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: TRRPSRTQRHLI*ACPSWPRPRGL
Trigger: GAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp CCCAGCGCCAGGTTCCAGACCACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGGTTGACAGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: PSARFQTTTYRA*SVKKHWLTVAM
Trigger: CATGGCCACTGTCAACCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGTGGTCTGGAACCTGGCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCAAAAGCTTTCTTGCTCTaGGGCGGCGGCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLPSTFISLHEGPHQIPAKAFLL*GGGGAG
Trigger: CCCGGCCCCGCCGCCGCCTCAGAGCAAGAAAGCTTT...TGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYPPVSC*VGSGPS
Trigger: AGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGGGCAAGCGCACGATaGCAGGGAACTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGASAR*QGTHSS
Trigger: GGAAGAATGAGTTCCCTGTCATCGTGCGCTTGCCCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGCTTCATTCCCTGACTTaGTGGCCGCATACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLLHSLT*WPHTGA
Trigger: TGCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAG...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQAGDPR*SSSSAC
Trigger: GCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATATCTTAAATACCCTCTaGATGGTGTTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHILNTL*MVLAVG
Trigger: CCCCACAGCCAACACCATTCAGAGGGTATTTAAGAT...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCAGGGCGGGAAACCACTaGTCAATCAAGGAATTGACG +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSRAGNH*SIKELT
Trigger: CGTCAATTCCTTGATTGATCAGTGGTTTCCCGCCCT...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAGGCGCCCTCATGGAATaGCTGCCTCGAAATCCCGTA +
Preference number: 4 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPGALME*LPRNPV
Trigger: TACGGGATTTCGAGGCAGTCATTCCATGAGGGCGCC...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHCRALS*QQLVEH
Trigger: GTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCACTCCTGGCCCTGGGATaGGAAGAAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPLLALG*EEGCLL
Trigger: AAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAG...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHPVGCV*AQVGAA
Trigger: AGCTGCTCCTACCTGTGCTCACACACAGCCAACAGG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYLHPRC*TWTCWL
Trigger: CAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGCCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPPQSRC*PPPWPS
Trigger: TGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGG...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAGGAGGACAGGGGATTaGTCTCCCAAGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEERRTGD*SPKGGS
Trigger: GGAACCTCCCTTGGGAGATCAATCCCCTGTCCTCCT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCAGACAGGTCCACTGTaGGACCCAGGCTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWQTGPL*DPGWKV
Trigger: CACTTTCCAGCCTGGGTCTCACAGTGGACCTGTCTG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGGGGTCTTTGCGACATaGCAGCCATCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLGVFAT*QPSTLA
Trigger: TGCAAGGGTTGATGGCTGGCATGTCGCAAAGACCCC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCATAGGCTGCCGGGATaGTCAGAAGCTGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYHRLPG*SEAGPF
Trigger: AAAAGGGCCAGCTTCTGAGCATCCCGGCAGCCTATG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLVSKIR*HHGWVV
Trigger: GACAACCCAGCCGTGGTGGCAGCGTATTTTGGACAC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCGACTCAAGCAATTCCTaGACAACTGCCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPDSSNS*TTAVCP
Trigger: TGGACACACGGCAGTTGTGCAGGAATTGCTTGAGTC...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCATTTCGTCCGATGACTaGACGCCAGGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPISSDD*TPGSSP
Trigger: GGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAAT...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCAGCTGCCAGAGGTTaGCCAGCTGCCCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPAARG*PAAPAQ
Trigger: CTGAGCTGGGGCAGCTGGGCAACCTCTGGCAGCTGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCTTCAGTGTCCAGCTaGCAGAGGTTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSSVSS*QRLPSC
Trigger: GCAGCTGGGCAACCTCTGGCAGCTGGACACTGAAGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCCAGGAGGGTGGACTTaGCCTGGCGCGGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQPGGWT*PGAGDP
Trigger: TGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp GAAGATTCCACACTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATGGGGGAGCGGCAGAGTaGCAGCACATAGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: EDSTLQVHLRQADQHPCYGGAAE*QHIGTQ
Trigger: CTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCC...ATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGTGTGGAATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS-3UTR GCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTCCCGGCTGCGGCGCTaGTGCTCTGCCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRSRLRR*CSASTA
Trigger: GGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGA...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCGCTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEERCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGTCGGTGGCCCGCAGGTaGCTCAGCATGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQSVARR*LSMVSA
Trigger: GGCAGACACCATGCTGAGGCACCTGCGGGCCACCGA...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCGCAGCGCGTGCAGCATaGTGGCCTCCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPAARAA*WPPAGT
Trigger: AGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGC...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCCACGATGCAGGGGTaGTGCAGCGCGTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQATMQG*CSACSM
Trigger: CATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAGGGCTCCAGCCGCCTaGAGATCTCCAGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILRAPAA*RSPGRH
Trigger: GTGCCTCCCTGGAGATCTGCAGGCGGCTGGAGCCCT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCGGATCAGGATCTGCGTaGCCAGCTCCTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: LGTQMRSLTARIFTACRCGSGSA*PAPHCT
Trigger: TGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCC...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGATCAGGATCTGCGTaGCCAGCTCCTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGSGSA*PAPHCT
Trigger: TGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGAGGATCTTCACGGCCTaGAGGTGCTGGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQRIFTA*RCWLKV
Trigger: GACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGTGTGCCTCTGGGCTTaGTGGCGGTGGCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEVCLWA*WRWHLK
Trigger: CTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACAC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGAGGGACTGAGCCCGTaGTGTGGTCATAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHEGLSP*CGHKRS
Trigger: TGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGACTCCTGAGACCCTaGTGTGGGATGAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGLLRP*CGMRVR
Trigger: TCTCACCCTCATCCCACAGCAGGGTCTCAGGAGTCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGCAAGTCACAGGGGATaGGATGGCTTGGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEASHRG*DGLAWA
Trigger: AGCCCAAGCCAAGCCATCGCATCCCCTGTGACTTGC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCTGGCCCTTTTCCAGCTaGGACGCGCACTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLWPFSS*DAHWSQ
Trigger: CTGCGACCAGTGCGCGTCCCAGCTGGAAAAGGGCCA...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGTTCCCGGATAACTGCTaGGCAAGGGACTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQFPDNC*ARDWLQ
Trigger: TTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAA...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGTCGAGCTCCGTGATCTaGCAGGAGATGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQSSSVI*QEMSMS
Trigger: GCTCATAGACATCTCCTGCCAGATCACGGAGCTCGA...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGGCAGCTCCCCCAGGTaGTTGTCGGAGAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSGSSPR*LSERFS
Trigger: GCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGTCAGTCCCGGAGCGCTaGCGACCTCTGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQSVPER*RPLVVK
Trigger: TTTCACCACCAGAGGTCGCCAGCGCTCCGGGACTGA...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGTCTCCATGCACCACCTaGGGGGCCCTCCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILSPCTT*GALPVC
Trigger: ACAGACGGGGAGGGCCCCCCAGGTGGTGCATGGAGA...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGGCTCAGGTAGCTCCTaGGGATCAGCCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFGSGSS*GSAALP
Trigger: TGGCAGGGCGGCTGATCCCCAGGAGCTACCTGAGCC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGGCTCAGGTAGCTCCTaGGGATCAGCCGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQGSGSS*GSAALP
Trigger: TGGCAGGGCGGCTGATCCCCAGGAGCTACCTGAGCC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAAGGTTCCTCAGGCCGTaGCTGGTGTCCGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: KVHTTVSFATTAASTSTPRFLRP*LVSGKW
Trigger: CCATTTCCCGGACACCAGCCACGGCCTGAGGAACCT...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGAATGGTGTTGGCTGTaGGGTGCCGCATACCGTGGG +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPEWCWL*GAAYRG
Trigger: CCCACGGTATGCGGCACCCCACAGCCAACACCATTC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGCCCTCTGAATGGTGTTaGCTGTGGGGTGCCGCATAC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQPSEWC*LWGAAY
Trigger: GTATGCGGCACCCCACAGCCAACACCATTCAGAGGG...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPPLISH*GPCAGP
Trigger: GGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGG...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSIWSWW*PSAGRC
Trigger: ACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGAT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLIWSWW*PSAGRC
Trigger: ACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGAT...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSAIWSW*WPSAGR
Trigger: GCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGC...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTCCACCGTGTAGTTCCTaGACTCCTCTTTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPIPPCSS*TPLFHP
Trigger: GGGATGGAAAAGAGGAGTCCAGGAACTACACGGTGG...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCCTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGCCACCGTGTAGTTCCTaGACTCCTCTTTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RLGTQMRSLTARIFTACRPPCSS*TPLFHP
Trigger: GGGATGGAAAAGAGGAGTCCAGGAACTACACGGTGG...CCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCCACACAGCTGGTAGGTaGTGGAGTGGTACATCACCA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPHTAGR*WSGTSP
Trigger: TGGTGATGTACCACTCCACCACCTACCAGCTGTGTG...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFFGLAV*LAAGGS
Trigger: GGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPTACRC*LKVSPS
Trigger: GGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGT...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTGCATGTTGGCACAGTaGGCAAGGAGGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHCMLAQ*ARRGCP
Trigger: TGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGGCCTGCAAAGCAGCCTaGCCTCGCGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPACKAA*PRVMPK
Trigger: CTTTGGCATCACGCGAGGCCAGGCTGCTTTGCAGGC...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGACCAAATACTTAAGTaGAACTGCTGGGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGDQILK*NCWVRG
Trigger: CCCTCTGACCCAGCAGTTCCACTTAAGTATTTGGTC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCTTGTAGCAAGCTCCTaGGGGAGGAGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHLVASS*GRRFWR
Trigger: CCTCCAGAACCTCCTCCCCCAGGAGCTTGCTACAAG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATACCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCT +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIPPVSC*VGSGPS
Trigger: AGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGG...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATACTACCCAGGGCAGTCTaGGATGGGACCATTTCACAC +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTILPRAV*DGTISH
Trigger: GTGTGAAATGGTCCCATCTCAGACTGCCCTGGGTAG...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGATGATTTCGTCCGATaGCTGCACGCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQDDFVR*LHARQL
Trigger: GAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATCCAGGGGAACTTCTTTaGGTGCGTTTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADPGELL*VRFLRN
Trigger: ATTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGG...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGGTCCTCGTAGTCCTTaGTGTCGTTGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPGPRSP*CRCRAS
Trigger: AGACGCCCGACAACGACATCAAGGACTACGAGGACC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCCCCATTCTTGGCCACTaGCCGAGAGCCCTTAATATT +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPPILGH*PRALNI
Trigger: AATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGG...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCAGCCCCCATCAAAAGTaGCCAGGAGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLSPHQK*PGALPA
Trigger: GGCAGGAAGGGCTCCTGGTCACTTTTGATGGGGGCT...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCGCACGTACTGCTCCATaGGTGGCGTCCCGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSARTAP*VASRRS
Trigger: AGAGCGACGGGACGCCACTCATGGAGCAGTACGTGC...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCCCGGGAAGTCGGTCATaGACAGTTCAGGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPPGSRS*TVQGPA
Trigger: AGCTGGTCCCTGAACTGTTCATGACCGACTTCCCGG...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSAIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLCRALS*QQLVEH
Trigger: GTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCA...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCTCCTGGCCCTGGGATaGGAAGAAGGCTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHLLALG*EEGCLL
Trigger: AAGCAGACAGCCTTCTTCTCATCCCAGGGCCAGGAG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCGGCCAAGAAGCAGGTaGCGACAGCTGGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRPRSR*RQLEYP
Trigger: TGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGCCTGTTGGCTGTGTGTaGGCACAGGTAGGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPPVGCV*AQVGAA
Trigger: AGCTGCTCCTACCTGTGCTCACACACAGCCAACAGG...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCTCAGAGCCGCTGTTaGCCACCTCCATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLPQSRC*PPPWPS
Trigger: TGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGG...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGGCCGCTCCCAGCCTaGTACCACTGTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFRPLPA*YHCLPW
Trigger: CCAGGGAAGACAGTGGTATCAGGCTGGGAGCGGCCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAATGTGCTGAGAGCCTaGGGTCTCTGGCGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHNVLRA*GLWRGK
Trigger: CTTTCCCCGCCAGAGACCTCAGGCTCTCAGCACATT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGCGGGCGGATCACCTaGGCTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGGRIT*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAGGTGATCCGCCCGCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCACTATGTACGCGGCGCGGATaGCTTCCGTCCTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: LPSTFISLHEGPHQIPALCTRRG*LPSCGT
Trigger: GGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACA...TAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYSIKSR*VPTTST
Trigger: GGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGCTGGCAGCCGATGGTaGTGCCCACGTCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACAGSRW*CPRPSC
Trigger: GCATGAAGGACGTGGGCAGCACCATCGGCTGCCAGC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTCCCGGCTGCGGCGCTaGTGCTCTGCCAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCSRLRR*CSASTA
Trigger: GGCCGTGCTGGCAGAGCAGCAGCGCCGCAGCCGGGA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTCGTCGTCGTCCCGGCTaGGGCGCTGCTGCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLRRRPG*GAAALP
Trigger: TGGCAGAGCAGCAGCGCCGCAGCCGGGACGACGACG...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGTCTGCTCCACCAGCTaGTCCAGCTGCCTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILVCSTS*SSCLSV
Trigger: GACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGAC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGGTCTGCTCCACCAGCTaGTCCAGCTGCCTGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRVCSTS*SSCLSV
Trigger: GACGGACAGGCAGCTGGAGCAGCTGGTGGAGCAGAC...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGTCGTTGTCGGGCGTCTaGTCCACCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILSLSGV*STSCSS
Trigger: GCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGA...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGTGTTGGCTGTGGGGTaGCGCATACCGTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACVLAVG*RIPWVS
Trigger: GGACACCCACGGTATGCGGCACCCCACAGCCAACAC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGGGCAGGGCACGTACTaGTCCATGAGTGGCGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWGQGTY*SMSGVP
Trigger: CGGGACGCCACTCATGGAGCAGTACGTGCCCTGCCC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAAGCATGCTGGCCTCCTaGCGGAACTCGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: KVHTTVSFATTAASTSTPSMLAS*RNSEKF
Trigger: GAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCT...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCAGCATGCTGGCCTCCTaGCGGAACTCGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVSMLAS*RNSEKF
Trigger: GAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCT...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGGGGTGCTGCAGCGCGTaGAGCATGCTGGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLISIRAINLCQKPTGTKGCCSA*SMLASC
Trigger: GCAGGAGGCCAGCATGCTGCACGCGCTGCAGCACCC...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQVGVLP*VFIRDA
Trigger: AGCATCGCGGATGAAGACGCACGGCAGAACCCCTAC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPMGVRS*SDLSEA
Trigger: TGCCTCCGACAGGTCTGAGCATGACCTGACCCCCAT...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCTCAGAACAGGATCCTaGACCCCTGCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHLRTGS*TPAPAN
Trigger: GTTTGCAGGAGCAGGGGTGCAGGATCCTGTTCTGAG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCTGCCCTACCTCAAGTaGTTCCCAGCGGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACLPYLK*FPAEGL
Trigger: GAGGCCCTCCGCTGGGAAGCACTTGAGGTAGGGCAG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACTGCCCTACCTCAAGTaGTTCCCAGCGGAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGLPYLK*FPAEGL
Trigger: GAGGCCCTCCGCTGGGAAGCACTTGAGGTAGGGCAG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGCAGTTAGTGCTGCCTaGCTCTTTGACAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWAVSAA*LFDRLQ
Trigger: CTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGTGGATCAGAGAGATaGAGTCATGGGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGGSER*SHGGQV
Trigger: CACCTGACCCCCATGACTGCATCTCTCTGATCCACC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGGCTTATATATGCGTaGAGGTCACAGGGGATGCGA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGLIYA*RSQGMR
Trigger: TCGCATCCCCTGTGACCTGCACGCATATATAAGCCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTAGCTGGGACGCGCACTaGTCGCAGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRASWDAH*SQASSS
Trigger: GCTGGAGGAGGCCTGCGACCAGTGCGCGTCCCAGCT...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGGGATGCTCAGAAGCTaGCCCTTTTCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQGMLRS*PFSSWD
Trigger: GTCCCAGCTGGAAAAGGGCCAGCTTCTGAGCATCCC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACTGGGTTGTCATCCGTaGGCTCGGTGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGLGCHP*ARWAAP
Trigger: TGGAGCTGCCCACCGAGCCCACGGATGACAACCCAG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTCAGCAGATGTTTGCTaGGGTCAGGACTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPSADVC*GQDYPA
Trigger: TGCTGGATAGTCCTGACCCCAGCAAACATCTGCTGA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCATCAGCAGATGTTTGCTaGGGTCAGGACTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSSADVC*GQDYPA
Trigger: TGCTGGATAGTCCTGACCCCAGCAAACATCTGCTGA...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGCAGGGCAGTCTGAGATaGGACCATTTCACACGGAGA +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLQGSLR*DHFTRR
Trigger: TCTCCGTGTGAAATGGTCCCATCTCAGACTGCCCTG...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGCAGCTCCCCCAGGTaGTTGTCGGAGAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGSSPR*LSERFS
Trigger: GCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGGAAGTGCCGCCAGCTaGTTCCCCTGTAACCTCAAG +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPGSAAS*FPCNLK
Trigger: CTTGAGGTTACAGGGGAACCAGCTGGCGGCACTTCC...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGGAAGTGCCGCCAGCTaGTTCCCCTGTAACCTCAAG +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQGSAAS*FPCNLK
Trigger: CTTGAGGTTACAGGGGAACCAGCTGGCGGCACTTCC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCCCGTCGCTCTCTGTaGCTGTCAGGGCGGGAAACC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSRRSL*LSGRET
Trigger: GGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCCGGAGAAGTTCTTCATaGCATCGGTGGCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVRRSSS*HRWPAG
Trigger: ACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCG...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHPGGCP*TASWQS
Trigger: AGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGTCGGGTCCTTCATCTaGCTCACCACCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGVGSFI*LTTDRA
Trigger: GGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGAC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGTATCCAAGGCCTGTTaGGGTGTGTTTAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLVSKAC*GVFKGH
Trigger: GTGCCCCTTAAACACACCCCAACAGGCCTTGGATAC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATGCAGGTGACGACAGCTaGAGTATCCAAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINAGDDS*SIQGLL
Trigger: CAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGC...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATACAGCTGGTAGGTGGTaGAGTGGTACATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYTAGRW*SGTSPR
Trigger: CCTTGGTGATGTACCACTCCACCACCTACCAGCTGT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAACAGCTGGTAGGTGGTaGAGTGGTACATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPATAGRW*SGTSPR
Trigger: CCTTGGTGATGTACCACTCCACCACCTACCAGCTGT...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWFGLAV*LAAGGS
Trigger: GGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTGCTCACGTCCGCGATaGAGTCCCCCTCAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACCSRPR*SPPQAP
Trigger: AGGTGCCTGAGGGGGACTCCATCGCGGACGTGAGCA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATGTGAGTGATTCCTGGTaGATCAGGATCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINVSDSW*IRICVP
Trigger: GGGCACGCAGATCCTGATCCACCAGGAATCACTCAC...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTCAGTGAGTGATTCCTaGTGGATCAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSVSDS*WIRICV
Trigger: CACGCAGATCCTGATCCACCAGGAATCACTCACTGA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSPRSR*RKAHWK
Trigger: CTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGAGGTCTCCCCGTCCATaGGGGTCAGGTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMRSPRP*GSGHAQ
Trigger: CTGAGCATGACCTGACCCCCATGGACGGGGAGACCT...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTCAGCAGTTGGGGGATaGGGTATTCAGAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPSAVGG*GIQRTL
Trigger: CAGAGTTCTCTGAATACCCCATCCCCCAACTGCTGA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTCCCCAGACAGCGAGTaGGTCTGGGAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSPDSE*VWEGLS
Trigger: GCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGCAGTTGTGGGGCACTaGAATGAGAGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEAVVGH*NERRGR
Trigger: TCTCCCTCTCCTCTCATTCCAGTGCCCCACAACTGC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCACGAATTGCCCAACTaGGTGGTCCGGCTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPHELPN*VVRLPC
Trigger: GCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGCCCTCAGAGCTCCATaGAATGCCTTCTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYALRAP*NAFFPF
Trigger: GAATGGGAAGAAGGCATTCCATGGAGCTCTGAGGGC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCTTGTAGCAAGCTCCTaGGGGAGGAGGTTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHLVASS*GRRFWR
Trigger: CCTCCAGAACCTCCTCCCCCAGGAGCTTGCTACAAG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCGGCAAGGTGCTCAGTaGGGGTGCTTTTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRQGAQ*GCFLSQ
Trigger: CTGGCTCAAAAAGCACCCCCACTGAGCACCTTGCCG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGTGGGGAGCTGCAGCTaGCGCCAGCCTCACATCACT +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGVGSCS*RQPHIT
Trigger: AGTGATGTGAGGCTGGCGCCAGCTGCAGCTCCCCAC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTGTAGCCTGGAACAGATaGTTTCGTCCGATGACTGCA +
Preference number: 4 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAVAWNR*FRPMTA
Trigger: TGCAGTCATCGGACGAAATCATCTGTTCCAGGCTAC...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCACTGCAGGCACATTGCTaGTGGTCAGGTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPLQAHC*WSGLQC
Trigger: ACACTGAAGACCTGACCATCAGCAATGTGCCTGCAG...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCCACTTGGTGGTCCTaGTGGTGGCCTCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPTWWS*WWPLHA
Trigger: TGCATGGAGAGGCCACCATCAGGACCACCAAGTGGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTTCCGTCTGCTGCGTaGAGCCAGTCCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLPSAA*SQSPPA
Trigger: TGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGCCCCCATCAAAAGTaGCCAGGAGCCCTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSPHQK*PGALPA
Trigger: GGCAGGAAGGGCTCCTGGTCACTTTTGATGGGGGCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGGCGCCCTCATGGAATaGCTGCCTCGAAATCCCGTA +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSGALME*LPRNPV
Trigger: TACGGGATTTCGAGGCAGTCATTCCATGAGGGCGCC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCGGCCAAGAAGCAGGTaGCGACAGCTGGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLRPRSR*RQLEYP
Trigger: TGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCG...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGAGCTGCACACGACTaGCGTAACCATGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRAAHD*RNHGGG
Trigger: GCCCCCTCCATGGTTACGTCAGTCGTGTGCAGCTCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTTGCAGAGCTGCACACGACTaGCGTAACCATGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCRSISARLISIRAINLCRAAHD*RNHGGG
Trigger: GCCCCCTCCATGGTTACGTCAGTCGTGTGCAGCTCT...GCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTAGAGCTGCACACGACTaGCGTAACCATGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSRAAHD*RNHGGG
Trigger: GCCCCCTCCATGGTTACGTCAGTCGTGTGCAGCTCT...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGGCCGCTCCCAGCCTaGTACCACTGTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRPLPA*YHCLPW
Trigger: CCAGGGAAGACAGTGGTATCAGGCTGGGAGCGGCCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTTTTTCCAAGCCTGTaGCTGACAGAGCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELFPSL*LTEQRL
Trigger: GAGACGCTGCTCTGTCAGTCACAGGCTTGGAAAAAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTGTGGGGCACTGGAATaGGAGGAGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACCGALE*EERESG
Trigger: CCCACTCTCCCTCTCCTCTCATTCCAGTGCCCCACA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILGRRIA*TWEAEV
Trigger: CACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTGCTGCCTGCCTCTTTaGCAGGCTGCAGAGGATGGC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPCCLPL*QAAEDG
Trigger: GCCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGTGTGGCGCCAAGATTaGAAGGAGAAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYVWRQD*KEKEVE
Trigger: CTCAACCTCTTTCTCCTTTCAATCTTGGCGCCACAC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGTTTACCTTCCACTGTaGGAGTTACTGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHVYLPL*ELLAAR
Trigger: CCGAGCTGCCAGTAACTCTCACAGTGGAAGGTAAAC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTGTGGGGAAATGGGGTaGACGTCAGGTGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHCGEMG*TSGGSE
Trigger: CTCTGATCCACCTGACGTTCACCCCATTTCCCCACA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGGAAGGGAGGGGGCCTaGATAATCCCTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPGREGA*IIPEEQ
Trigger: CTGCTCCTCAGGGATTATTCAGGCCCCCTCCCTTCC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGGAAGGGAGGGGGCCTaGATAATCCCTGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACGREGA*IIPEEQ
Trigger: CTGCTCCTCAGGGATTATTCAGGCCCCCTCCCTTCC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCAGATCCCCATAGGCTaGCGGGATGCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMQIPIG*RDAQKL
Trigger: CAGCTTCTGAGCATCCCGGCAGCCTATGGGGATCTG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHVSKIR*HHGWVV
Trigger: GACAACCCAGCCGTGGTGGCAGCGTATTTTGGACAC...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCTCCGGGTCAGCCCCGTaGGTCAGGACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTSGSAP*VRTRSF
Trigger: GAAGCTCCTGGTCCTGACGCACGGGGCTGACCCGGA...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTTTTTCCCGGATAACTaGTGGGCAAGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYFFPDN*WARDWL
Trigger: AAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTATTTCGTCCGATGACTaGACGCCAGGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFISSDD*TPGSSP
Trigger: GGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAAT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCATTTCGTCCGATGACTaGACGCCAGGCAGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSISSDD*TPGSSP
Trigger: GGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAAT...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATTCCAGGGTTTTGAGCTaGCTGCAGGTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINSRVLS*LQVHFS
Trigger: AGAGAAGTGGACCTGCAGGCAGCTCAAAACCCTGGA...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTTTCCAGCACACTTGCTaGCTCAGTCCCGGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSFQHTC*LSPGAL
Trigger: CAGCGCTCCGGGACTGAGGCAGCAAGTGTGCTGGAA...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAAGACAGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTGGACCTGGAGCTGGCGCTGTGCTCCAGCTTaGTGTTCTCCAGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KDRLVSVAVHRDLWTWSWRCAPA*CSPGRA
Trigger: GGCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCG...CCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCTGTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCCTCGTCCTCGCTGTaGTCCAGCTTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPSSSL*SSLLFS
Trigger: GGAGAACAGCAAGCTGGAGCACAGCGAGGACGAGGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGCCCTCGTCCTCGCTGTaGTCCAGCTTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQPSSSL*SSLLFS
Trigger: GGAGAACAGCAAGCTGGAGCACAGCGAGGACGAGGG...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCTCGGTGGCCCGCAGGTaGCTCAGCATGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTSVARR*LSMVSA
Trigger: GGCAGACACCATGCTGAGGCACCTGCGGGCCACCGA...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCGCAGCGCGTGCAGCATaGTGGCCTCCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTAARAA*WPPAGT
Trigger: AGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGC...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGACGATGCAGGGGTGCTaGAGCGCGTGCAGCATGCTG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWTMQGC*SACSML
Trigger: CAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGTGCACTTCCTCCGGCTaGCCCAGAACCGGGCGGATG +
Preference number: 4 (lower is better)
Translates to: RLISIRAINLCQKPTGTKCTSSG*PRTGRM
Trigger: CATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCA...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACAGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KSRSMAVRTQSSMSKYCTGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...TGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGGAGGCCCGGCCCATTaGTGTACCAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWGGPAH*CTRPQS
Trigger: GCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGTGCTCAGGGGCCACCTaGATGTTGGCACAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILCSGAT*MLAQWA
Trigger: TGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGCA...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCATGTGCAAGGCCCTTaGACCCAGTGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFHVQGP*TQCPQS
Trigger: GCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGCCTCTTTGACAGGCTaGAGAGGATGGCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHASLTG*RGWHCC
Trigger: GCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEERPDAL*CKLLSN
Trigger: GTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCATAGCTGGGACGCGCACTaGTCGCAGGCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSLSQSVGLLPSTFISLHSWDAH*SQASSS
Trigger: GCTGGAGGAGGCCTGCGACCAGTGCGCGTCCCAGCT...ATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp CTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCATGGCCCTTTTCCAGCTaGGACGCGCACTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LLPSTFISLHEGPHQIPAWPFSS*DAHWSQ
Trigger: CTGCGACCAGTGCGCGTCCCAGCTGGAAAAGGGCCA...TGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCATCCGTGGGCTCGGTaGGCAGCTCCACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWHPWAR*AAPPVS
Trigger: AGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTGGGTTGTCATCCGTaGGCTCGGTGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLGCHP*ARWAAP
Trigger: TGGAGCTGCCCACCGAGCCCACGGATGACAACCCAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTTCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCCGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLPSLSLLVSCPPPSYHCRCHHG*VVIRGL
Trigger: GAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCG...GCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCAGTTCAGAAGCCGCTaGGGACTGCAGGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACQFRSR*GLQGPG
Trigger: ACCAGGTCCCTGCAGTCCCCAGCGGCTTCTGAACTG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGCAGGGCAGTCTGAGATaGGACCATTTCACACGGAGA +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQQGSLR*DHFTRR
Trigger: TCTCCGTGTGAAATGGTCCCATCTCAGACTGCCCTG...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAATCCAGGAGGGAGGTaGGACAACTTGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYNPGGR*DNLLLE
Trigger: TTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLGRSQT*PGTGST
Trigger: AGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCC...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSGRSQT*PGTGST
Trigger: AGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCC...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCGGAGGTAGCTGTCATTaGCGACGGGCAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGGGSCH*RRAGRS
Trigger: AGATCGCCCTGCCCGTCGCCAATGACAGCTACCTCC...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGGGTGCCGCATACCGTaGGTGTCCAGGCCAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILGCRIP*VSRPGL
Trigger: TAAACCTGGCCTGGACACCCACGGTATGCGGCACCC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSVLLHE*RPVALC
Trigger: ACAGAGAGCGACGGGACGCCACTCATGGAGCAGTAC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACSSWHR*PAGASA
Trigger: TGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCGCAATCTGGAGCTGGTaGTGGCCCAGTGCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTAIWSW*WPSAGR
Trigger: GCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGC...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTTTTCTGGTCCTCGGTaGCTGTCCACAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWFSGPR*LSTGIS
Trigger: AGAGATCCCTGTGGACAGCCACCGAGGACCAGAAAA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCATTGCTGTACCAGACCTCAGAGCCGCTGTTGACCACCTCCATGGCCTTCACGCAGGTGACGACAGCTaGAGTATCCAAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PIAVPDLRAAVDHLHGLHAGDDS*SIQGLL
Trigger: CAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGC...GTGAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGTCTGGTACAGCAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGGTGAGTGATTCCTGGTaGATCAGGATCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPVSDSW*IRICVP
Trigger: GGGCACGCAGATCCTGATCCACCAGGAATCACTCAC...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTGGGCTTGCTGGCGGTaGCACTTAAAGGAACTCATT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYWACWR*HLKELI
Trigger: AATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCAAAAGCTTGGGGCCTaGGGCAGATGGAATCTGGCT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHQKLGA*GRWNLA
Trigger: AGCCAGATTCCATCTGCCCCAGGCCCCAAGCTTTTG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGCCTGCAAAGCAGCCTaGCCTCGCGTGATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPACKAA*PRVMPK
Trigger: CTTTGGCATCACGCGAGGCCAGGCTGCTTTGCAGGC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCCTCATGATAGAGGTTaGGGTTGCTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYPHDRG*GCFLFG
Trigger: CCCAAACAGGAAGCAACCCCAACCTCTATCATGAGG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGACGGAGAGAAGGGGTTaGGGTCCTTGCCCATTCCCC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILTERRG*GPCPFP
Trigger: GGGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGCAGGGAGATGGGGGTaGGGCCGTTTTATAGGATTT +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHAGRWG*GRFIGF
Trigger: AAATCCTATAAAACGGCCCCACCCCCATCTCCCTGC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AGATTATATGGTGGAGGAGCGGAGGCTGAGGAAGAATaGGGACCTAGCTCGGCCTGGCAAGGAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RLYGGGAEAEEE*GPSSAWQGAAW
Trigger: CCAGGCTGCTCCTTGCCAGGCCGAGCTAGGTCCCAATTCTTCCTCAGCCTCCGCTCCTCCACCATATAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPRDWLQ*STFSAD
Trigger: ATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCT...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGATGATTTCGTCCGATaGCTGCACGCCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFDDFVR*LHARQL
Trigger: GAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTCCACATCCTTCAGGTaGTTTTTCCAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSTSFR*FFQKTA
Trigger: GGCTGTCTTTTGGAAAAATCACCTGAAGGATGTGGA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGAGAGATCCAGGGTTTTaGGCTGCCTGCAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMRDPGF*AACRST
Trigger: AGTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCT...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILAGDPR*SSSSAC
Trigger: GCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATGGTCCTCGTAGTCCTTaGTGTCGTTGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDGPRSP*CRCRAS
Trigger: AGACGCCCGACAACGACATCAAGGACTACGAGGACC...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGAGGAAGCTGATGGCTaGCTGCAGGTCCTCGTAGTC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFEEADG*LQVLVV
Trigger: GACTACGAGGACCTGCAGTCAGCCATCAGCTTCCTC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGGTCTGGGGCAGGAGATaGAGTCCCGCTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGVWGRR*SPARWP
Trigger: CGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGAC...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCCGGGAAGTCGGTCATaGACAGTTCAGGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFPGSRS*TVQGPA
Trigger: AGCTGGTCCCTGAACTGTTCATGACCGACTTCCCGG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCCCGGGAAGTCGGTCATaGACAGTTCAGGGACCAGCT +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPPGSRS*TVQGPA
Trigger: AGCTGGTCCCTGAACTGTTCATGACCGACTTCCCGG...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEERGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCGGCCAAGAAGCAGGTaGCGACAGCTGGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRPRSR*RQLEYP
Trigger: TGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCCTTTTAAGACGGCAATaGCTCGGCCCCGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTLLRRQ*LGPAGR
Trigger: GCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAG...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTTCCAAGCCTGTGACTaGCAGAGCAGCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACFQACD*QSSVST
Trigger: GGTGGAGACGCTGCTCTGTCAGTCACAGGCTTGGAA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGAGGAGTAGGAGAGGGTaGATTTTGGTGCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEERSRRG*ILVPAK
Trigger: CTTTGCAGGCACCAAAATTCACCCTCTCCTACTCCT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCTTTTTGAGCCAGGATaGGCCAGGAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYLFEPG*ARRRNF
Trigger: GAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAAG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAGGAGGACAGGGGATTaGTCTCCCAAGGGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRRTGD*SPKGGS
Trigger: GGAACCTCCCTTGGGAGATCAATCCCCTGTCCTCCT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGTGTGGCGCCAAGATTaGAAGGAGAAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWVWRQD*KEKEVE
Trigger: CTCAACCTCTTTCTCCTTTCAATCTTGGCGCCACAC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAAGGAAGATTTGGGATaGGTTGCACTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYKEDLG*VALGTE
Trigger: CTCTGTTCCCAGTGCAACTCATCCCAAATCTTCCTT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAAGCCGGACCGGGTGTaGGGAGGGGAGGTGATAAAA +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPKPDRV*GGEVIK
Trigger: TTTTATCACCTCCCCTCCTCACACCCGGTCCGGCTT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAGACTCAATAAAGAGTaGGTACAGCTGAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYRLNKE*VQLKEP
Trigger: CGGCTCCTTCAGCTGTACTCACTCTTTATTGAGTCT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTCTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGAGCAGAAAGCTTTCTTaGTCTGAGGCGGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VSCPPPSYHCMKALTRYQSRKLS*SEAAAG
Trigger: CCCCGCCGCCGCCTCAGAGCAAGAAAGCTTTCTGCT...CTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTGGTGGGACAACTTGTTaGTGGAAATGTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRGGTTC*WKCQFQ
Trigger: TTGAAATTGACATTTCCAGCAACAAGTTGTCCCACC...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGGTCCATCTTCATTTTTaGCAAGTTGGTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGVHLHF*QVGFWR
Trigger: TCTCCAGAAACCAACTTGGCAAAAATGAAGATGGAC...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCTTCAGTGTCCAGCTaGCAGAGGTTGCCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSSVSS*QRLPSC
Trigger: GCAGCTGGGCAACCTCTGGCAGCTGGACACTGAAGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGTCATCTTCATCAGCTTaGACTTTTCCGCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRSSSSA*TFPLSA
Trigger: TGCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGA...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACATAGGCACGCAGCGTTaGAATCCTTTCCACACGGAA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHIGTQR*NPFHTE
Trigger: TTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTAT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGCATCCTGAGGTCTTCTaGTCTGATCACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLHPEVF*SDHPIL
Trigger: AAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATG...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTGCTCTTCCGTCTGCTaGGTGAAGCCAGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWCSSVC*VKPVPT
Trigger: GGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTACTGCTCTTCCGTCTaGTGCGTGAAGCCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACYCSSV*CVKPVP
Trigger: GGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTCGGTGGCCCGCAGGTaGCTCAGCATGGTGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVSVARR*LSMVSA
Trigger: GGCAGACACCATGCTGAGGCACCTGCGGGCCACCGA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGCAGCGCGTGCAGCATaGTGGCCTCCTGCCGGAACT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVAARAA*WPPAGT
Trigger: AGTTCCGGCAGGAGGCCAGCATGCTGCACGCGCTGC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCCAGAACCGGGCGGATaGCCTTGGACAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWPEPGG*PWTASW
Trigger: CCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACSIMSA*SRRNCT
Trigger: AGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGTAGGGGTTCTGCCGTaGGTCTTCATCCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACVGVLP*VFIRDA
Trigger: AGCATCGCGGATGAAGACGCACGGCAGAACCCCTAC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGGATCAGGATCTGCGTaGCCAGCTCCTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMGSGSA*PAPHCT
Trigger: TGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCC...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSMGVRS*SDLSEA
Trigger: TGCCTCCGACAGGTCTGAGCATGACCTGACCCCCAT...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAGGATCTTCACGGCCTaGAGGTGCTGGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILRIFTA*RCWLKV
Trigger: GACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCATCTGATCTTGGCTTaGCCAAGCTGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPHLILA*PSWPRP
Trigger: AGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGGCCTGTGCTCCAGCTaGGTCCAAATTTACTTGACA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHGLCSS*VQIYLT
Trigger: TGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGGGACCATGCTGAATaGTGGGCCCATCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRDHAE*WAHPSN
Trigger: GTTGCTGGGATGGGCCCAGCATTCAGCATGGTCCCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCATTGTACCTCCTGGTaGAGGCTGCAGGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWHCTSW*RLQASP
Trigger: TGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCCACAACAGGGTCTTTaGATGTGCAAGGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHPQQGL*MCKALA
Trigger: TGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGGGCTTATATATGCGTaGAGGTCACAGGGGATGCGA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHGLIYA*RSQGMR
Trigger: TCGCATCCCCTGTGACCTGCACGCATATATAAGCCC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCGAAAAGAGAGTCAGTaGAGGGAGATGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILRKESQ*REMGVG
Trigger: CCCCACCCCCATCTCCCTGCACTGACTCTCTTTTCG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTCTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCACTGCCGCTGGCTGTaGGGTGCATTAAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: VSCPPPSYHCMKALTRYQHCRWL*GALRRG
Trigger: TCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTG...CTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGGGATGCTCAGAAGCTaGCCCTTTTCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILGMLRS*PFSSWD
Trigger: GTCCCAGCTGGAAAAGGGCCAGCTTCTGAGCATCCC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TTCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCACCCAGGTGCCCTCGCTaGCAAGCCAAGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: FFPLSVCWSLALHLHITAPRCPR*QAKASI
Trigger: GATGCTGGCCTTGGCTTGCCAGCGAGGGCACCTGGG...TGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATTTCCCGGATAACTGCTaGGCAAGGGACTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHFPDNC*ARDWLQ
Trigger: TTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAA...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTGGCAGCTCCCCCAGGTaGTTGTCGGAGAGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRAGSSPR*LSERFS
Trigger: GCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCC...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCCACGGACTCAACCTTaGCTCTCGAGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVPRTQP*LSSQPA
Trigger: GGCCGGCTGGCTCGAGAGCCAAGGTTGAGTCCGTGG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGTCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: WIRICVPSSSLYMMLTSASVKKH*LTVAML
Trigger: CAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTTGAGCAGCCAGAACTaGAGGTTGGCCACGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLSSQN*RLATAS
Trigger: GGAGGCCGTGGCCAACCTCCAGTTCTGGCTGCTCAA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: AERRELQGEAERVDADADFPHGT*LQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAA...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCGCCCTGCCAGTCGCTaGCAGCCGATGGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTRPASR*QPMVLP
Trigger: GGGCAGCACCATCGGCTGCCAGCGACTGGCAGGGCG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCTGGTGTCCGGGAAATaGAGCAGGGTGCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILLVSGK*SRVPVS
Trigger: AGAAACCGGCACCCTGCTCCATTTCCCGGACACCAG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCCTGGTGTCCGGGAAATaGAGCAGGGTGCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSLVSGK*SRVPVS
Trigger: AGAAACCGGCACCCTGCTCCATTTCCCGGACACCAG...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCAGGCCAGGTTTAGATaGAAGGAGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMQARFR*KEMGQE
Trigger: CTCCTGCCCCATCTCCTTCCATCTAAACCTGGCCTG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATCCCTCTGAATGGTGTTaGCTGTGGGGTGCCGCATAC +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDPSEWC*LWGAAY
Trigger: GTATGCGGCACCCCACAGCCAACACCATTCAGAGGG...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGTACTGCTCCATGAGTaGCGTCCCGTCGCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILVLLHE*RPVALC
Trigger: ACAGAGAGCGACGGGACGCCACTCATGGAGCAGTAC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPPGGCP*TASWQS
Trigger: AGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGCAGCGGTCGCTTCTCTaGCTTAGTGTCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRQRSLL*LSVPAL
Trigger: GAGTGCTGGGACACTAAGCCAGAGAAGCGACCGCTG...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGGGATCTCTGGACCTaGAGCTGGCAGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFRDLWT*SWQLTF
Trigger: GAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLHGLH*VGVLPC
Trigger: GCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVTSPRS*PCHPGT
Trigger: GGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGT...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGGTCTCCCCGTCCATaGGGGTCAGGTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRSPRP*GSGHAQ
Trigger: CTGAGCATGACCTGACCCCCATGGACGGGGAGACCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCATGACTCGGCCCCGCTaGGCGCCAGAATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTMTRPR*APESFS
Trigger: GGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCAT...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATATGTCTTCTAGGTCCTTaGAGAACTAGAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: AMTRPRWAPESFSRPMTICLLGP*RTRGRW
Trigger: CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACA...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTCAGCAGTTGGGGGATaGGGTATTCAGAGAACTCTG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEESAVGG*GIQRTL
Trigger: CAGAGTTCTCTGAATACCCCATCCCCCAACTGCTGA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTAACTGGGCAGTTGTaGGGCACTGGAATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELTGQL*GTGMRG
Trigger: TCCTCTCATTCCAGTGCCCCACAACTGCCCAGTTAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCATCTGGGGGTTAACTaGGCAGTTGTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACHLGVN*AVVGHW
Trigger: CCAGTGCCCCACAACTGCCCAGTTAACCCCCAGATG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTTAAGAAGGAGATGCTaGCTGGTTACCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHLRRRC*LVTTLC
Trigger: GCAGAGGGTGGTAACCAGCCAGCATCTCCTTCTTAA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCACATTGTACCTCCTaGTGCAGGCTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSHCTS*CRLQAS
Trigger: CGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGCCCTCAGAGCTCCATaGAATGCCTTCTTCCCATTC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHALRAP*NAFFPF
Trigger: GAATGGGAAGAAGGCATTCCATGGAGCTCTGAGGGC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTGCGATGGCTTGGCTTaGGCTCAGAGGCCTGACGCA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWCDGLA*AQRPDA
Trigger: TGCGTCAGGCCTCTGAGCCCAAGCCAAGCCATCGCA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAGGAGGAATGGAGAGTaGAAGGTTGCCTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYRRNGE*KVAYSE
Trigger: TTCACTGTAGGCAACCTTCCACTCTCCATTCCTCCT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCTAAAAGTATTAGGGTaGCAGCAGCCGCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHLKVLG*QQPLHR
Trigger: TCTGTGCAGCGGCTGCTGCCACCCTAATACTTTTAG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTCAGCTGTGATGGCTTaGAGAAACAGTGTAAACTGG +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPSAVMA*RNSVNW
Trigger: CCAGTTTACACTGTTTCTCCAAGCCATCACAGCTGA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTCGGACTCAACCTACTTaGCTCTCGAGCCAGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRARTQPT*LSSQPA
Trigger: GGCCGGCTGGCTCGAGAGCCAAGTAGGTTGAGTCCG...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 72 bp GCTAAGCGGGTGCACTCGGACTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAAGGAACTCATTCATTC +
Preference number: 4 (lower is better)
Translates to: AKRVHSDCVPLG*LAVALKGTHSF
Trigger: GAATGAATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCACCCGCTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCATTTGAGTGCGTTTTCTaGGAAATCCACATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSFECVF*EIHILQ
Trigger: CTGAAGGATGTGGATTTCTCAGAAAACGCACTCAAA...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTCAGGTCCACTTCTCTTaGGGTGGAAGTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRAQVHFS*GGSAAS
Trigger: GCTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTG...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp AAAGACAGACTAGTCTCGGTGGCTGTCCACAGGGATCTCTGGACCTGGAGCTGGCGGAAGATTCCACACTaGGGTAGCCCCCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: KDRLVSVAVHRDLWTWSWRKIPH*GSPHQK
Trigger: CTTTTGATGGGGGCTACCTCAGTGTGGAATCTTCCG...CCAGCTCCAGGTCCAGAGATCCCTGTGGACAGCCACCGAGACTAGTCTGTCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp AAATCCAGGTGCGTCCCGACCACCAGCACCACGGCGTTTGGGGCCTTGGCCTCGGAAGTCCCTCACTTCTaGTTGGCAAACAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: KSRCVPTTSTTAFGALASEVPHF*LANNFH
Trigger: ATGAAAATTGTTTGCCAATCAGAAGTGAGGGACTTC...CGAGGCCAAGGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGACCGGGCCCGGTAGATaGCGGTGCCACTGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLTGPGR*RCHCRP
Trigger: AGGGCGGCAGTGGCACCGTCATCTACCGGGCCCGGT...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFLHPRC*TWTCWL
Trigger: CAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACGAAAAGGGAGTCAGTaGAGGGAGATAGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRKGSQ*REIGVR
Trigger: CCTCACGCCTATCTCCCTTCACTGACTCCCTTTTCG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAGGGAAACAGGCCCTTaGAAAGAAGGTAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRETGP*KEGNVE
Trigger: CTCCACATTACCTTCTTTTCAAGGGCCTGTTTCCCT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCTTTTTGAGCCAGGATaGGCCAGGAAAAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWLFEPG*ARKRTF
Trigger: GAAAGTCCTTTTCCTGGCTCATCCTGGCTCAAAAAG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTGGGGTCTTTGCGACATaGCAGCCATCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVGVFAT*QPSTLA
Trigger: TGCAAGGGTTGATGGCTGGCATGTCGCAAAGACCCC...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGACTCAAGCAATTCCTaGACAACTGCCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHDSSNS*TTAVCP
Trigger: TGGACACACGGCAGTTGTGCAGGAATTGCTTGAGTC...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTCCGGGTCAGCCCCGTaGGTCAGGACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCSGSAP*VRTRSF
Trigger: GAAGCTCCTGGTCCTGACGCACGGGGCTGACCCGGA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTTTCCAGCACACTTGCTaGCTCAGTCCCGGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRAFQHTC*LSPGAL
Trigger: CAGCGCTCCGGGACTGAGGCAGCAAGTGTGCTGGAA...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCCAGGTAAGACAGCATTaGTTTGGGGCCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LGTQMRSLTARIFTACRCQVRQH*FGAFFL
Trigger: CAAAAAGAAGGCCCCAAAGCAATGCTGTCTTACCTG...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTAALLL*QHGLLQ
Trigger: CTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGCGGCGCTGCTGCTCTaGCAGCACGGCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLAALLL*QHGLLQ
Trigger: CTGCAGGAGGCCGTGCTGGCAGAGCAGCAGCGCCGC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTGCACTTCCTCCGGCTaGCCCAGAACCGGGCGGATG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYCTSSG*PRTGRM
Trigger: CATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGGGCAGCACATCCTCTaGACCTCCATGAGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQGQHIL*TSMRPF
Trigger: GAAGGGCCTCATGGAGGTGCAGAGGATGTGCTGCCC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp ACTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTAGGGCTCCAGCCGCCTaGAGATCTCCAGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: TWTWGSPMGLGKLHGLTRRAPAA*RSPGRH
Trigger: GTGCCTCCCTGGAGATCTGCAGGCGGCTGGAGCCCT...ACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTGRVAG*RGFRVQ
Trigger: TTGGACACGGAACCCCCGGCAGCCAGCCACACGGCC...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGATGGGGGTCAGGTCATaGTCAGACCTGTCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWMGVRS*SDLSEA
Trigger: TGCCTCCGACAGGTCTGAGCATGACCTGACCCCCAT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCTCAGAACAGGATCCTaGACCCCTGCTCCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILLRTGS*TPAPAN
Trigger: GTTTGCAGGAGCAGGGGTGCAGGATCCTGTTCTGAG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGTTTAAGAAGGAGATaGTGGCTGGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHCLRRR*WLVTTL
Trigger: GAGGGTGGTAACCAGCCAGCATCTCCTTCTTAAACA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCAGAGCTCCATGGAATaGCTTCTTCCCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHQSSME*LLPIPQ
Trigger: CTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACACTTGCAATTCTGTGTaGACAGTCCCCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHTCNSV*TVPSFK
Trigger: CTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGACTTGCAATTCTGTGTaGACAGTCCCCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEETCNSV*TVPSFK
Trigger: CTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGT...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGCGGAGACCCCCACTTaGAATTCTGTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPAETPT*NSVCTV
Trigger: GACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCCTGACGCACTGTGCTaGAAGCTGCTTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHPDALC*KLLSNK
Trigger: TTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGGGTTGGGGGTTTCTTaGCCCCCAGAAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQGLGVS*PPERRR
Trigger: TCTCCGCCTTTCTGGGGGGCAAGAAACCCCCAACCC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCGCACCTCAGACCATTTaGCCATTTTACGACAAGAAT +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPAPQTI*PFYDKN
Trigger: ATTCTTGTCGTAAAATGGGCAAATGGTCTGAGGTGC...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGCACAGCCTGCCTTTaGTGGTGTGTGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSTACL*WCVAIR
Trigger: CCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAGCACAGCCTGCCTTTaGTGGTGTGTGGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILSTACL*WCVAIR
Trigger: CCTAATGGCCACACACCAGCAAAGGCAGGCTGTGCT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGACTGGCATAATCCCATaGGGAGTCAGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPTGIIP*GVSSRA
Trigger: AGCCCGAGAGCTGACTCCGCATGGGATTATGCCAGT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GTCTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGGGGATGCTCAGAAGCTaGCCCTTTTCCAGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VSCPPPSYHCMKALTRYQGMLRS*PFSSWD
Trigger: GTCCCAGCTGGAAAAGGGCCAGCTTCTGAGCATCCC...CTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGGGACTGTGTCGAGGTaGTTGTCGTTCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGGTVSR*LSFRQR
Trigger: CCTTTGCCTGAACGACAACCACCTCGACACAGTCCC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCGGGACTGTGTCGAGGTaGTTGTCGTTCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGGTVSR*LSFRQR
Trigger: CCTTTGCCTGAACGACAACCACCTCGACACAGTCCC...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCTCTCCATGCACCACCTaGGGGGCCCTCCCCGTCTGT +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVSPCTT*GALPVC
Trigger: ACAGACGGGGAGGGCCCCCCAGGTGGTGCATGGAGA...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPFPHGT*LQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAA...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCAGGCCAGGTTTAGATaGAAGGAGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILQARFR*KEMGQE
Trigger: CTCCTGCCCCATCTCCTTCCATCTAAACCTGGCCTG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTCCCGTCGCTCTCTGTaGCTGTCAGGGCGGGAAACC +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGSRRSL*LSGRET
Trigger: GGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGA...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCCTAGGGCGCCCTCATaGAATGACTGCCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPPRAPS*NDCLEI
Trigger: GATTTCGAGGCAGTCATTCCATGAGGGCGCCCTAGG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRSFLAI*SWWWPS
Trigger: ACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFTTVYS*PWDEKK
Trigger: CTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCAGGTGACGACAGCTaGAGTATCCAAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILAGDDS*SIQGLL
Trigger: CAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCACACAGCTGGTAGGTaGTGGAGTGGTACATCACCA +
Preference number: 4 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLHTAGR*WSGTSP
Trigger: TGGTGATGTACCACTCCACCACCTACCAGCTGTGTG...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCTTTGGGTTGGCCGTGTaGCTGGCTGCCGGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVFGLAV*LAAGGS
Trigger: GGAACCCCCGGCAGCCAGCCACACGGCCAACCCAAA...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCQAPLG*PCGWLP
Trigger: CGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCAGGCACCTTTGGGTTaGCCGTGTGGCTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYQAPLG*PCGWLP
Trigger: CGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGCTTGAGGGGGACCTaGCAGCCTGGCGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGLRGT*QPGGVG
Trigger: CCCCACCCCGCCAGGCTGCCAGGTCCCCCTCAAGCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACSPRSR*RKAHWK
Trigger: CTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCAGTCCTCGCAGTCGGTaGAGAAAGGCACACTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPSPRSR*RKAHWK
Trigger: CTTCCAGTGTGCCTTTCTCCACCGACTGCGAGGACT...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCTACRC*LKVSPS
Trigger: GGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATACGGCCTGCAGGTGCTaGCTGAAGGTCTCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYTACRC*LKVSPS
Trigger: GGACGGGGAGACCTTCAGCCAGCACCTGCAGGCCGT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGATTCCATCTGAGACCTaGGGATGGCAGGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWIPSET*GWQEGP
Trigger: CGGGCCTTCCTGCCATCCCCAGGTCTCAGATGGAAT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTTGGCTTGCCCAAGCTaGCCCAGGCCTCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYLACPS*PRPRGL
Trigger: GAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCAGCGTCTCCACCCATaGAAGCTGCTCAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVQRLHP*KLLRGH
Trigger: GTGGCCCCTGAGCAGCTTCCATGGGTGGAGACGCTG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGAGACCCTCAGCCCCCTaGGACTTGGTGCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVRPSAP*DLVPRL
Trigger: CAACCTGGGCACCAAGTCCCAGGGGGCTGAGGGTCT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGGGTTGCTTCCTGTTTaGGGCCATATTCTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYGLLPV*GHILRD
Trigger: ATCTCTTAGAATATGGCCCCAAACAGGAAGCAACCC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGTGGCAACGTGCTCAGTaGGGGAGCTTTTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILWQRAQ*GSFLSQ
Trigger: CTGGCTCAAAAAGCTCCCCCACTGAGCACGTTGCCA...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTGGGATGAGTTGCACTaGGAACAGAGACTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSWDELH*EQRLGR
Trigger: CCTCCCTAGTCTCTGTTCCCAGTGCAACTCATCCCA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGGACCTAGCTCGGCCTaGCAAGGAGCAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYGPSSA*QGAAWG
Trigger: TCCCCAGGCTGCTCCTTGCCAGGCCGAGCTAGGTCC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGCTGCAGGCATTCCTTaGCCTGGTGGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACAAGIP*PGGQIS
Trigger: AGAAATCTGGCCACCAGGCCAAGGAATGCCTGCAGC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCTGCAGGCATTCCTTaGCCTGGTGGCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFAAGIP*PGGQIS
Trigger: AGAAATCTGGCCACCAGGCCAAGGAATGCCTGCAGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTACAGGGTGCGGTCCTaGCTCTTGTGTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHYRVRS*LLCKNS
Trigger: AGAATTCTTACACAAGAGCCAGGACCGCACCCTGTA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCTAAAAGTATTAGGGTaGCAGCAGCCGCTGCACAGA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHLKVLG*QQPLHR
Trigger: TCTGTGCAGCGGCTGCTGCCACCCTAATACTTTTAG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGACAGCCTGCCTTTGCTaGTGTGTGGCCATTAGGCCT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILTACLC*CVAIRP
Trigger: AGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGGATGCACTTGGACTTaGGGATCCCCTATGGGTCTT +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMGCTWT*GSPMGL
Trigger: AAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCC...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCCACCAGCACCCGTGTaGGGCTCGGTAGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQPPAPV*GSVVKV
Trigger: CACTTTGACTACCGAGCCCCACACGGGTGCTGGTGG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR CAA 72 bp TCAGTCAAATGTAACGTTCCTAGGCCAAGCCACGAATaGCCCAACTGGGTGGTCCGGCTGCCCTGCTATCTC +
Preference number: 4 (lower is better)
Translates to: SVKCNVPRPSHE*PNWVVRLPCYL
Trigger: GAGATAGCAGGGCAGCCGGACCACCCAGTTGGGCAATTCGTGGCTTGGCCTAGGAACGTTACATTTGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AGGCTGCCTTCCCAGTCCGTGACCGGCGCTGGAGTTTaGGGTCCACGGATAAAACGTGTCTCCTTTATCTCT +
Preference number: 4 (lower is better)
Translates to: RLPSQSVTGAGV*GPRIKRVSFIS
Trigger: AGAGATAAAGGAGACACGTTTTATCCGTGGACCCAAAACTCCAGCGCCGGTCACGGACTGGGAAGGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp GGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTaGCAATCCTTTCCACACGGAACTTGGCTTCAATTA +
Preference number: 4 (lower is better)
Translates to: GSGRVPAHRHAA*QSFPHGTWLQL
Trigger: TAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCT +
Preference number: 4 (lower is better)
Translates to: VSCPPPSYHCMKALTRYQPPVSC*VGSGPS
Trigger: AGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGG...CTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGGGGCAAGCGCACGATaGCAGGGAACTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQGASAR*QGTHSS
Trigger: GGAAGAATGAGTTCCCTGTCATCGTGCGCTTGCCCC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPRDWLQ*STFSAD
Trigger: ATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCT...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAAAGGTCGAGCTCCGTaGTCTGGCAGGAGATGTCTA +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPKGRAP*SGRRCL
Trigger: TAGACATCTCCTGCCAGATCACGGAGCTCGACCTTT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGTCCACATCCTTCAGGTaGTTTTTCCAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGSTSFR*FFQKTA
Trigger: GGCTGTCTTTTGGAAAAATCACCTGAAGGATGTGGA...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGAGTCATCTTAAATACCCTCTaGATGGTGTTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DLRAQLLTVHDAHVRDGVILNTL*MVLAVG
Trigger: CCCCACAGCCAACACCATTCAGAGGGTATTTAAGAT...GACTCCATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGGATTTCTTTTCACTCTaGATGTGCTACAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: VPALHHERLQSPELHFLRDFFSL*MCYSDF
Trigger: GAAATCGCTGTAGCACATTCAGAGTGAAAAGAAATC...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTGCAGGGCGCTGTCCTaGCAGCAACTCGTAGAGCAC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVCRALS*QQLVEH
Trigger: GTGCTCTACGAGTTGCTGTCAGGACAGCGCCCTGCA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCCCAGCACTCCATCATaGGCGCCTGCAGTCGCCGGA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAPSTPS*APAVAG
Trigger: TCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGGGAGGCACAGTCGATaGCAAGGAGGCCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAGRHSR*QGGPAH
Trigger: ATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGCAGTAGTCAGTGAGTaGTTCCTGGTGGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMAVVSE*FLVDQD
Trigger: ATCCTGATCCACCAGGAATCACTCACTGACTACTGC...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCTTTTAAGACGGCAATaGCTCGGCCCCGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCLLRRQ*LGPAGR
Trigger: GCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCATGAGGGTGGTAAGTaGCATCTATCTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHHEGGK*HLSEMP
Trigger: AGGCATCTCAGATAGATGTCACTTACCACCCTCATG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTCCCACACAGTGGCTTaGACCCACAACAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPSHTVA*THNRVF
Trigger: AAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGCTTTTTGAGCCAGGATaGGCCAGGAGAAGGAATTTC +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPLFEPG*ARRRNF
Trigger: GAAATTCCTTCTCCTGGCTCATCCTGGCTCAAAAAG...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGTTGGGCTGGTTGGTCTaGGGACTTGAGGTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILLGWLV*GLEVVG
Trigger: ACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAA...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGAGAAGGGAGAAATTaGAGTGTGGCGCCAAGATTG +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHREGRN*SVAPRL
Trigger: CAATCTTGGCGCCACACTTCAATTTCTCCCTTCTCT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCCTGTTGTGGGGTTTaGGGGCCGGAATTTAATTTT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSCCGV*GPEFNF
Trigger: AAAATTAAATTCCGGCCCTCAAACCCCACAACAGGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGTTTACCTTCCACTGTaGGAGTTACTGGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPVYLPL*ELLAAR
Trigger: CCGAGCTGCCAGTAACTCTCACAGTGGAAGGTAAAC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACACCAGCCATCAACCCTTaGAGCAGCCGATCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KSRSMAVRTQSSMSKYCTPAINP*SSRSSK
Trigger: CTTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGG...TGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CTCTTGCCCTCCACCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCAGGGGTCTTTGCGACATaGCAGCCATCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLPSTFISLHEGPHQIPAGVFAT*QPSTLA
Trigger: TGCAAGGGTTGATGGCTGGCATGTCGCAAAGACCCC...TGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATTGTACGCGGCGCGGATaGCTTCCGTCCTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: PYGSWKVTWIDTFWWVVYCTRRG*LPSCGT
Trigger: GGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACA...ATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCCAGATCCCCATAGGCTaGCGGGATGCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTQIPIG*RDAQKL
Trigger: CAGCTTCTGAGCATCCCGGCAGCCTATGGGGATCTG...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCATTTCACAACCCCCAGGTaGCCTCGCTGGCAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSLSQSVGLLPSTFISLHFTTPR*PRWQAK
Trigger: CTTGGCTTGCCAGCGAGGGCACCTGGGGGTTGTGAA...ATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGTTCTCAGCAGATGTTTaGTGGGGTCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQFSADV*WGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAA...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGTCCATCTTCATTTTTaGCAAGTTGGTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPIVHLHF*QVGFWR
Trigger: TCTCCAGAAACCAACTTGGCAAAAATGAAGATGGAC...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATCAGGTAAGACAGCATTaGTTTGGGGCCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: EWRPVALCGCQGGKPLINQVRQH*FGAFFL
Trigger: CAAAAAGAAGGCCCCAAAGCAATGCTGTCTTACCTG...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAGACCTTCCAGGCTCTTaGAGGAAATCTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPDLPGS*RKSHVS
Trigger: ACTTACATGAGATTTCCTGCAAGAGCCTGGAAGGTC...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGGCAGCCGATGGTGCTaGCCACGTCCTTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCGSRWC*PRPSCC
Trigger: GCAGCATGAAGGACGTGGGCAGCACCATCGGCTGCC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCTCGTTGTCGGGCGTCTaGTCCACCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVSLSGV*STSCSS
Trigger: GCTGGAGCAGCTGGTGGAGCAGACGCCCGACAACGA...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PPADLQGGTVDDKEARPIILKIL*RHSESQ
Trigger: TTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATAT...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTTGCTCTTCCGTCTGCTaGGTGAAGCCAGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLCSSVC*VKPVPT
Trigger: GGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCA...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQADQHP*YKPLPE
Trigger: TTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTCCATGTCGAAGTACTaGACATCCTCTGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: LGTQMRSLTARIFTACRCSMSKY*TSSDFS
Trigger: TGAGAAATCAGAGGATGTGCAGTACTTCGACATGGA...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTCCCTCGTCCTCGCTGTaGTCCAGCTTGCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSPSSSL*SSLLFS
Trigger: GGAGAACAGCAAGCTGGAGCACAGCGAGGACGAGGG...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGCCAGAACCGGGCGGATaGCCTTGGACAGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRPEPGG*PWTASW
Trigger: CCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGG...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp ACTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTGGAGGCCCGGCCCATTaGTGTACCAGACCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TWTWGSPMGLGKLHGLTRGGPAH*CTRPQS
Trigger: GCTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCC...ACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTCCACCAGCACCCCATaGGGAGTCAGCTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYSTSTP*GVSSRA
Trigger: AGCCCGAGAGCTGACTCCGCATGGGGTGCTGGTGGA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCAACAAACAGGGCCTGTaGTCCAGCTGCGTCCAAATT +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSNKQGL*SSCVQI
Trigger: AATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTCCACCCATGGAAGCTaGTCAGGGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVSTHGS*SGATCM
Trigger: CATGCAGGTGGCCCCTGAGCAGCTTCCATGGGTGGA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTGGAGACTGTTTCCCTaGTGTTGGGTGAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFWRLFP*CWVRSS
Trigger: GCTTGACCTCACCCAACAGCAGGGAAACAGTCTCCA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAAAGTGTCTCAGGGTTaGTGCCAAACGAGGCATGAA +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHKVSQG*CQTRHE
Trigger: TTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTACTATAGCACAGCCTaGCTTTGCTGGTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFYYSTA*LCWCVA
Trigger: GGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGGGTCACCGCCCCGCGTaGACGGCTTGCCGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: HYALGLLNLQTCKPNIFLGHRPA*TACRPC
Trigger: ACACGGGCGGCAAGCCGTCCACGCGGGGCGGTGACC...CAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp ATATCACTGCATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGACTTCTCATCCGTGGGCTCGGTaGGCAGCTCCACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISLHEGPHQIPALCSWTSHPWAR*AAPPVS
Trigger: AGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATG...AGAAGTCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCAGGGCAGTCTGAGATaGGACCATTTCACACGGAGA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILQGSLR*DHFTRR
Trigger: TCTCCGTGTGAAATGGTCCCATCTCAGACTGCCCTG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCGAGCCAGCCGGCCTCTaGAGCTCCCACTTGGTGGTC +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTEPAGL*SSHLVV
Trigger: GACCACCAAGTGGGAGCTCCAGAGGCCGGCTGGCTC...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSVKKH*LTVAML
Trigger: CAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGTCCGTGAAGAAGCACTaGTTGACAGTGGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRSVKKH*LTVAML
Trigger: CAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLPLISH*GPCAGP
Trigger: GGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGG...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGTGCCACTGCCGCCCTaGCCCAGGACGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSVPLPP*PRTLPS
Trigger: CGAGGGCAGCGTCCTGGGCCAGGGCGGCAGTGGCAC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTTGACGGCCACAGGCTaGCCCTGGTACCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGLTATG*PWYRAR
Trigger: CCGGGCCCGGTACCAGGGCCAGCCTGTGGCCGTCAA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTTCTTCATGGCATCGGTaGCCCGCAGGTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLSSWHR*PAGASA
Trigger: TGCTGAGGCACCTGCGGGCCACCGATGCCATGAAGA...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVLHGLH*VGVLPC
Trigger: GCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILTSPRS*PCHPGT
Trigger: GGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATCACACAGCTGGTAGGTaGTGGAGTGGTACATCACCA +
Preference number: 4 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDHTAGR*WSGTSP
Trigger: TGGTGATGTACCACTCCACCACCTACCAGCTGTGTG...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGTGAGTGATTCCTGGTaGATCAGGATCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWVSDSW*IRICVP
Trigger: GGGCACGCAGATCCTGATCCACCAGGAATCACTCAC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTCAGTGAGTGATTCCTaGTGGATCAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSSVSDS*WIRICV
Trigger: CACGCAGATCCTGATCCACCAGGAATCACTCACTGA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGCATTCATTCTCTGGATaGGGCAACACTCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPHSFSG*GNTPHP
Trigger: CGGGTGAGGAGTGTTGCCCCATCCAGAGAATGAATG...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGACAGCGAGTGGGTCTaGGAGGGACTGAGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQADSEWV*EGLSPC
Trigger: GCACGGGCTCAGTCCCTCCCAGACCCACTCGCTGTC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTGCATGTTGGCACAGTaGGCAAGGAGGGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVCMLAQ*ARRGCP
Trigger: TGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCAATCTGGCTTGCATCTaGGGGTTAACTGGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSNLACI*GLTGQL
Trigger: CAACTGCCCAGTTAACCCCCAGATGCAAGCCAGATT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGGGGTTGCTTCCTGTTTaGGGCCATATTCTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWGLLPV*GHILRD
Trigger: ATCTCTTAGAATATGGCCCCAAACAGGAAGCAACCC...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTTCTGGAGGAATGCCTaGCCGCTGCAGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWFWRNA*PLQFRC
Trigger: ACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGGGGTGAACGTCAGGTaGATCAGAGAGATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFGVNVR*IREMQS
Trigger: TGACTGCATCTCTCTGATCCACCTGACGTTCACCCC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCATGGATTGACACGTTCTaGTGGGTTGTTTATGGATTT +
Preference number: 4 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSWIDTF*WVVYGF
Trigger: AAATCCATAAACAACCCACCAGAACGTGTCAATCCA...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 72 bp ATGCCTGGCCGCTGCAGTTCAGGTGTTTGGAAGTTCTaGTGTGCTGGAGATGTGGCTGGGGTTTGTCTCACA +
Preference number: 4 (lower is better)
Translates to: MPGRCSSGVWKF*CAGDVAGVCLT
Trigger: TGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAAACACCTGAACTGCAGCGGCCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp GTCTGTGAAGCTTTGGGGCAGTACAGCCCAGGTAATTaGCTGAGCCTGATGGGTGTCAGGGTCAGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VCEALGQYSPGN*LSLMGVRVSPS
Trigger: ACTTGGACTGACCCTGACACCCATCAGGCTCAGCAAATTACCTGGGCTGTACTGCCCCAAAGCTTCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp GGCTTGACTGATGTAATGGGGGCTGTCTGTGAAGCTTaGGGGCAGTACAGCCCAGGTAATTTGCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GLTDVMGAVCEA*GQYSPGNLLSL
Trigger: CAGGCTCAGCAAATTACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAGCCCCCATTACATCAGTCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp GTAGGCCAGGCCCGAGGCGATCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAGGGGTATAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: VGQARGDLVGYF*GEHVSQGYKGR
Trigger: TCTTCCTTTATACCCCTGGGACACATGCTCACCCAAAAAATAGCCTACCAGATCGCCTCGGGCCTGGCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAAAGCTTTCTTGCTCTaGGGCGGCGGCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEKAFLL*GGGGAG
Trigger: CCCGGCCCCGCCGCCGCCTCAGAGCAAGAAAGCTTT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTGGGGCAAGCGCACGATaGCAGGGAACTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLGASAR*QGTHSS
Trigger: GGAAGAATGAGTTCCCTGTCATCGTGCGCTTGCCCC...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TTCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCAGGGGCAAGCGCACGATaGCAGGGAACTCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FFPLSVCWSLALHLHITAGASAR*QGTHSS
Trigger: GGAAGAATGAGTTCCCTGTCATCGTGCGCTTGCCCC...TGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGTAGCCTGGAACAGATaGTTTCGTCCGATGACTGCA +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQVAWNR*FRPMTA
Trigger: TGCAGTCATCGGACGAAATCATCTGTTCCAGGCTAC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTGCAGGCACATTGCTaGTGGTCAGGTCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLQAHC*WSGLQC
Trigger: ACACTGAAGACCTGACCATCAGCAATGTGCCTGCAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCCATTCTTGGCCACTaGCCGAGAGCCCTTAATATT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPILGH*PRALNI
Trigger: AATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCTTCCGTCTGCTGCGTaGAGCCAGTCCCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALPSAA*SQSPPA
Trigger: TGCTGGTGGGGACTGGCTTCACGCAGCAGACGGAAG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCGAAGTCCCTCACTTCTaGTTGGCAAACAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSEVPHF*LANNFH
Trigger: ATGAAAATTGTTTGCCAATCAGAAGTGAGGGACTTC...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAGGGCGGGAAACCACTaGTCAATCAAGGAATTGACG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRAGNH*SIKELT
Trigger: CGTCAATTCCTTGATTGATCAGTGGTTTCCCGCCCT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSGHRR*CFSCAG
Trigger: ACCTGCACAAGAAAAACATCATCTTCTGTGACCTGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGCGCCCTCATGGAATaGCTGCCTCGAAATCCCGTA +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVGALME*LPRNPV
Trigger: TACGGGATTTCGAGGCAGTCATTCCATGAGGGCGCC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 4 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSRGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCTTCATCCGCGATGCTaGACTTGGACCTGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQLHPRC*TWTCWL
Trigger: CAGCCAACAGGTCCAAGTTCAGCATCGCGGATGAAG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGGAGCAGTAGTCAGTaGGTGATTCCTGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGWSSSQ*VIPGGS
Trigger: TGATCCACCAGGAATCACTCACTGACTACTGCTCCA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGTGGAGCAGTAGTCAGTaGGTGATTCCTGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRWSSSQ*VIPGGS
Trigger: TGATCCACCAGGAATCACTCACTGACTACTGCTCCA...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGEHRDI*SWLAQA
Trigger: AGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGAACACAGAGACATCTaGTCTTGGCTTGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILEHRDI*SWLAQA
Trigger: AGCTTGGGCAAGCCAAGATCAGATGTCTCTGTGTTC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTGTACACGTGTGCAGTaGATGTTTAGCAAATACATA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPCTRVQ*MFSKYI
Trigger: TATGTATTTGCTAAACATTCACTGCACACGTGTACA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGTGGGGCACTGGAATaGGAGGAGAGGGAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCCGALE*EERESG
Trigger: CCCACTCTCCCTCTCCTCTCATTCCAGTGCCCCACA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGGAGTAGGAGAGGGTaGATTTTGGTGCCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRSRRG*ILVPAK
Trigger: CTTTGCAGGCACCAAAATTCACCCTCTCCTACTCCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGGCAGGAGAATTGCTTaGACCTGGGAGGCGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCGRRIA*TWEAEV
Trigger: CACCTCCGCCTCCCAGGTTCAAGCAATTCTCCTGCC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCCTCTGAAACCTGGGTaGATAATCAGAGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFPLKPG*IIREVS
Trigger: GGACACCTCTCTGATTATTCACCCAGGTTTCAGAGG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGACGATGGAAAGGAAATaGGAGGTTCTAAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPTMERK*EVLRGG
Trigger: CCCGCCTCTTAGAACCTCTCATTTCCTTTCCATCGT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCCGTTCTACCTTTCCTaGAGGCTGAGGACTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWPFYLS*RLRTVR
Trigger: CCTTACAGTCCTCAGCCTTCAGGAAAGGTAGAACGG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TGTCTGCTTCCCACAGCACAGTTCATACATGAAGGTGGCAAAAGTCGGGTCCTTCGATGTCCCAGACGTTaGACTCCACGGACTCAACCC +
Preference number: 4 (lower is better)
Translates to: CLLPTAQFIHEGGKSRVLRCPRR*TPRTQP
Trigger: GGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCG...AAGGACCCGACTTTTGCCACCTTCATGTATGAACTGTGCTGTGGGAAGCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGATGCCTTCCGTCCTaGGGGACCGCGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGCLPS*GTALQG
Trigger: ACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ATTTTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGGGATGCCTTCCGTCCTaGGGGACCGCGCTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: ILRVGCYKSEFFPLSVCWGCLPS*GTALQG
Trigger: ACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCC...CCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTTTTTTCCCGGATAACTaGTGGGCAAGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVFFPDN*WARDWL
Trigger: AAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAA...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGATAGGCACGCAGCGTTaGAATCCTTTCCACACGGAA +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRIGTQR*NPFHTE
Trigger: TTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTAT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCTGGCAGCCGATGGTaGTGCCCACGTCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTAGSRW*CPRPSC
Trigger: GCATGAAGGACGTGGGCAGCACCATCGGCTGCCAGC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGGGATCAGCCGCCCTaGCAGTCGCTGGCAGCCGAT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGDQPP*QSLAAD
Trigger: ATCGGCTGCCAGCGACTGGCAGGGCGGCTGATCCCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTGTCCGTCAGGTACTaGACGTCGTCGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTLSVRY*TSSSRL
Trigger: CAGCCGGGACGACGACGTGCAGTACCTGACGGACAG...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGSIMSA*SRRNCT
Trigger: AGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGA...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCTGCACCCCTGCTCCTaGAAACTGATGGGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALHPCS*KLMGEA
Trigger: GGCCTCCCCCATCAGTTTGCAGGAGCAGGGGTGCAG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAACAAACAGGGCCTGTaGTCCAGCTGCGTCCAAATT +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGNKQGL*SSCVQI
Trigger: AATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCAACAAGATTATTATGTaGAAACAAACAGGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPNKIIM*KQTGPV
Trigger: CACAGGCCCTGTTTGTTTGCACATAATAATCTTGTT...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTCCGCTGTACACGTGTaGAGTGAATGTTTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWSAVHV*SECLAN
Trigger: ATTTGCTAAACATTCACTGCACACGTGTACAGCGGA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTCCACCCATGGAAGCTaGTCAGGGGCCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYSTHGS*SGATCM
Trigger: CATGCAGGTGGCCCCTGAGCAGCTTCCATGGGTGGA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACCTCCTGGTGCAGGCTaGAGGCCTCGCCAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLPPGAG*RPRQPQ
Trigger: CTGAGGCTGGCGAGGCCTGCAGCCTGCACCAGGAGG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCAGAGCTCCATGGAATaGCTTCTTCCCATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFQSSME*LLPIPQ
Trigger: CTGAGGAATGGGAAGAAGGCATTCCATGGAGCTCTG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGATAGAGGTTGGGGTTaGTTCCTGTTTGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACDRGWG*FLFGAI
Trigger: TATGGCCCCAAACAGGAAGCAACCCCAACCTCTATC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGGGTTGGGGGTTTCTTaGCCCCCAGAAAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCGLGVS*PPERRR
Trigger: TCTCCGCCTTTCTGGGGGGCAAGAAACCCCCAACCC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGGAAAGGGGTCGGGGTaGAGAGATACGAGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYGKGSG*RDTRSG
Trigger: TCCCGACCTCGTATCTCTGCACCCCGACCCCTTTCC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGCACCTCAGACCATTTaGCCATTTTACGACAAGAAT +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHAPQTI*PFYDKN
Trigger: ATTCTTGTCGTAAAATGGGCAAATGGTCTGAGGTGC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTACTATAGCACAGCCTaGCTTTGCTGGTGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWYYSTA*LCWCVA
Trigger: GGCCACACACCAGCAAAGGCAGGCTGTGCTATAGTA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCCCAGGTGCCCTCGCTaGCAAGCCAAGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTPRCPR*QAKASI
Trigger: GATGCTGGCCTTGGCTTGCCAGCGAGGGCACCTGGG...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTCAGCAGATGTTTGCTaGGGTCAGGACTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACSADVC*GQDYPA
Trigger: TGCTGGATAGTCCTGACCCCAGCAAACATCTGCTGA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AGGCACGGCCAAGAAGCAGGTGACGACAGCTGGAGTATCCAAGGCCTGTTGGGGTCATTTTTGCCAAGTTaGTTTCTGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: RHGQEAGDDSWSIQGLLGSFLPS*FLERSR
Trigger: CCTGGATCTCTCCAGAAACCAACTTGGCAAAAATGA...CCCCAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGGGTGGACTTGCCCTaGCGCGGGGGACCCACGATG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSERVDLP*RGGPTM
Trigger: CATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGAATGGTGTTGGCTGTaGGGTGCCGCATACCGTGGG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYEWCWL*GAAYRG
Trigger: CCCACGGTATGCGGCACCCCACAGCCAACACCATTC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGAATGGTGTTGGCTGTaGGGTGCCGCATACCGTGGG +
Preference number: 4 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLEWCWL*GAAYRG
Trigger: CCCACGGTATGCGGCACCCCACAGCCAACACCATTC...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCCTCTGATTTCTCACTaGGGTCCGTGTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCPLISH*GPCAGP
Trigger: GGGCCCAGCACACGGACCCCAGTGAGAAATCAGAGG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWPWTAS*QSGAGG
Trigger: ACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTAGGGATCTCTGGACCTaGAGCTGGCAGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSRDLWT*SWQLTF
Trigger: GAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCT...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGWPCG*LPGVPC
Trigger: ACACGGAACCCCCGGCAGCCAGCCACACGGCCAACC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGGTTGGCCGTGTGGCTaGCTGCCGGGGGTTCCGTGT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLGWPCG*LPGVPC
Trigger: ACACGGAACCCCCGGCAGCCAGCCACACGGCCAACC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTCAGTGAGTGATTCCTaGTGGATCAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSVSDS*WIRICV
Trigger: CACGCAGATCCTGATCCACCAGGAATCACTCACTGA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGAACTTGCTGGGGAGCTaGGGAGGCTTGAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTNLLGS*GGLRGT
Trigger: GGTCCCCCTCAAGCCTCCCCAGCTCCCCAGCAAGTT...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGGTCTCCCCGTCCATaGGGGTCAGGTCATGCTCAG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRSPRP*GSGHAQ
Trigger: CTGAGCATGACCTGACCCCCATGGACGGGGAGACCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGTTCAAACTCCCATTCTaGTTTAAGGAGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPFKLPF*FKEPQR
Trigger: CCTTTGGGGCTCCTTAAACCAGAATGGGAGTTTGAA...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGCAGTTGTGGGGCACTaGAATGAGAGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQAVVGH*NERRGR
Trigger: TCTCCCTCTCCTCTCATTCCAGTGCCCCACAACTGC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGGGGCCTGGGGCAGATaGAATCTGGCTTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCGAWGR*NLACIW
Trigger: CCAGATGCAAGCCAGATTCCATCTGCCCCAGGCCCC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCCAGGCTAGAAAGCTaGTGTGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPRLES*CDHSSL
Trigger: CAGTGAGCTATGATCACACCAGCTTTCTAGCCTGGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGAAAGAAGGAAGATTTaGGATGAGTTGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEERRKI*DELHWE
Trigger: TTCCCAGTGCAACTCATCCCAAATCTTCCTTCTTTC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTTCAAAGCATGCTGTaGGATGGGATATTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEFQSML*DGILVL
Trigger: CAACACCAATATCCCATCCCACAGCATGCTTTGAAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATTTAGGACAAGTGAAATaGGGGAATTGTAAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYLGQVK*GNCKES
Trigger: ACTCTCCTTACAATTCCCCCATTTCACTTGTCCTAA...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATATAGGCAAAACAATGTaGTTGATAAGGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYIGKTM*LIRHRS
Trigger: GGATCTGTGCCTTATCAACCACATTGTTTTGCCTAT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTGTCTGTGAAGCTTTaGGGCAGTACAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLSVKL*GSTAQV
Trigger: TACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAATAATGTGGGAGGCTaGATTGAAGTCGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACNNVGG*IEVGAR
Trigger: CCTGGCACCGACTTCAATCCAGCCTCCCACATTATT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGGGAAGAAGGAAATGTaGGGAAATGGGGTGAACGTC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGGKKEM*GNGVNV
Trigger: GACGTTCACCCCATTTCCCCACATTTCCTTCTTCCC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCCTGGTGGGTTGTTTATaGATTTCTGCTCTTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LGTQMRSLTARIFTACRCLVGCL*ISALCR
Trigger: TCTACAAAGAGCAGAAATCCATAAACAACCCACCAG...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGATCCCCTATGGGTCTTaGAAAGTTACATGGATTGAC +
Preference number: 4 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWIPYGS*KVTWID
Trigger: GTCAATCCATGTAACTTTCCAAGACCCATAGGGGAT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
3UTR CAA 72 bp GCTGAATGCTGGGCCCATCCCAGCAACATTTTACTGTaGTGGAGACTGTTTCCCTGCTGTTGGGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AECWAHPSNILL*WRLFPCCWVRS
Trigger: TGACCTCACCCAACAGCAGGGAAACAGTCTCCACAACAGTAAAATGTTGCTGGGATGGGCCCAGCATTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp GCCCAACTGGGTGGTCCGGCTGCCCTGCTATCTCACTaGTTTGTGTGCTTATTGTCAACTCTACCTATGAGG +
Preference number: 4 (lower is better)
Translates to: AQLGGPAALLSH*FVCLLSTLPMR
Trigger: CCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGGACCACCCAGTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AAGGAAATGAGAGGTTCTAAGAGGCGGGCTAGCGGCTaGTACTATAGCACAGCCTGCCTTTGCTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KEMRGSKRRASG*YYSTACLCWCV
Trigger: CACACACCAGCAAAGGCAGGCTGTGCTATAGTACAAGCCGCTAGCCCGCCTCTTAGAACCTCTCATTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp TGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTaGCCACCACGGCAGCATCCACCAGCACCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: CFHFQRCTQQCP*PPRQHPPAPVW
Trigger: CCACACGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGCTACCCAGGGCAGTCTaGGATGGGACCATTTCACAC +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRLPRAV*DGTISH
Trigger: GTGTGAAATGGTCCCATCTCAGACTGCCCTGGGTAG...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCGAAGCTGTCAGTTTTTaGAGTTTTGAGAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPEAVSF*SFERCK
Trigger: CTTGCACCTCTCAAAACTTCAAAAACTGACAGCTTC...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGAGAGATCCAGGGTTTTaGGCTGCCTGCAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRRDPGF*AACRST
Trigger: AGTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCT...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGGGCGACCTCTGGTGGTaGAAAAGGCAATACGCTTCG +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGGDLWW*KRQYAS
Trigger: CGAAGCGTATTGCCTTTTTCACCACCAGAGGTCGCC...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCCCACTTGGTGGTCCTaGTGGTGGCCTCTCCATGCA +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTPTWWS*WWPLHA
Trigger: TGCATGGAGAGGCCACCATCAGGACCACCAAGTGGG...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCCTTGGCCTCGATGTTaGGCAGCCAGAACTGGAGGT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYPWPRC*AARTGG
Trigger: ACCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGGTCCTCGTAGTCCTTaGTGTCGTTGTCGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCGPRSP*CRCRAS
Trigger: AGACGCCCGACAACGACATCAAGGACTACGAGGACC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGATCTTAAATACCCTCTaGATGGTGTTGGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPILNTL*MVLAVG
Trigger: CCCCACAGCCAACACCATTCAGAGGGTATTTAAGAT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPSGHRR*CFSCAG
Trigger: ACCTGCACAAGAAAAACATCATCTTCTGTGACCTGA...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCAGCCTGGCCTCGCGTaGTGCCAAAGCAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYQPGLA*CQSKSL
Trigger: CAAGCTTTTGCTTTGGCATCACGCGAGGCCAGGCTG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAAACACAGAGATTCTTaGCTGTGTCTCCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFKHRDS*LCLRSQ
Trigger: CTGTGACCGGAGACACAGTCAAGAATCTCTGTGTTT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAAGGAAGATTTGGGATaGGTTGCACTGGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFKEDLG*VALGTE
Trigger: CTCTGTTCCCAGTGCAACTCATCCCAAATCTTCCTT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAAATTTGGGCTTGACTaGTGTAATGGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACKFGLD*CNGGCL
Trigger: CAGACAGCCCCCATTACATCAGTCAAGCCCAAATTT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGACTCAATAAAGAGTaGGTACAGCTGAAGGAGCCG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRLNKE*VQLKEP
Trigger: CGGCTCCTTCAGCTGTACTCACTCTTTATTGAGTCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTTCCAAGGACAGGCCTaGATTCTGAGAAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPFQGQA*ILRRES
Trigger: ACTTTCCCTTCTCAGAATTCAGGCCTGTCCTTGGAA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAAAAGGTCTAAGAATTaGGATGACTCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHKRSKN*DDSGHL
Trigger: CAGATGTCCTGAGTCATCTCAATTCTTAGACCTTTT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGTTGTCACTGCCACTaGCGCTGGCTGTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQACCHCH*RWLWGA
Trigger: TGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCAGATCCCCATAGGCTaGCGGGATGCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCQIPIG*RDAQKL
Trigger: CAGCTTCTGAGCATCCCGGCAGCCTATGGGGATCTG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGAGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PSYHCMKALTRYQHYALGVSKIR*HHGWVV
Trigger: GACAACCCAGCCGTGGTGGCAGCGTATTTTGGACAC...TCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp ATTTTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGTCCGGGTCAGCCCCGTaGGTCAGGACCAGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILRVGCYKSEFFPLSVCWSGSAP*VRTRSF
Trigger: GAAGCTCCTGGTCCTGACGCACGGGGCTGACCCGGA...CCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGTTCTCAGCAGATGTTTaGTGGGGTCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRFSADV*WGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAA...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGTGGGACAACTTGTTaGTGGAAATGTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGGTTC*WKCQFQ
Trigger: TTGAAATTGACATTTCCAGCAACAAGTTGTCCCACC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTTCAATTAAATCCAGGTaGGTCCCGACCACCAGCACC +
Preference number: 4 (lower is better)
Translates to: LFSKSCRSISARLISIRASIKSR*VPTTST
Trigger: GGTGCTGGTGGTCGGGACGCACCTGGATTTAATTGA...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCATCCTGAGGTCTTCTaGTCTGATCACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILHPEVF*SDHPIL
Trigger: AAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCAGGAACTGGAAGTACTaGTCTTCCGTCTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTRNWKY*SSVCCV
Trigger: CACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCT...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGTCCATGTCGAAGTACTaGACATCCTCTGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: QELEVLLFRLLREASPHQSMSKY*TSSDFS
Trigger: TGAGAAATCAGAGGATGTGCAGTACTTCGACATGGA...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTAGCATGCTGGCCTCCTaGCGGAACTCGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCSMLAS*RNSEKF
Trigger: GAACTTCTCCGAGTTCCGGCAGGAGGCCAGCATGCT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTGCAGTCGCCGGAACTaGACTTCCTCCGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSECSRRN*TSSGCP
Trigger: GGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACTGCA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTCCATCATGAGCGCCTaGAGTCGCCGGAACTGCACT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYSIMSA*SRRNCT
Trigger: AGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACA +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTSCPLG*PAPRET
Trigger: TGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCT...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGGGCTCCAGCCGCCTaGAGATCTCCAGGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLRAPAA*RSPGRH
Trigger: GTGCCTCCCTGGAGATCTGCAGGCGGCTGGAGCCCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGCCGTGTGGCTGGCTaGCGGGGGTTCCGTGTCCAA +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGRVAG*RGFRVQ
Trigger: TTGGACACGGAACCCCCGGCAGCCAGCCACACGGCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGATGGAATCTGGCTTaGATCTGGGGGTTAACTGGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRWNLA*IWGLTG
Trigger: CCCAGTTAACCCCCAGATGCAAGCCAGATTCCATCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGCGGAGACCCCCACTTaGAATTCTGTGTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVAETPT*NSVCTV
Trigger: GACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACCTGACGCACTGTGCTaGAAGCTGCTTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGPDALC*KLLSNK
Trigger: TTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGAATGCCTGGCCGCTaGAGTTCAGGTGTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVGMPGR*SSGVWK
Trigger: CTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGGCTCTGGGAGTGGCTaGCAGGTGAGTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTGSGSG*QVSWTV
Trigger: GACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGATCTGGGCTTATATATaGGTGCAGGTCACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILIWAYI*VQVTGD
Trigger: ATCCCCTGTGACCTGCACGCATATATAAGCCCAGAT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCGAAAAGAGAGTCAGTaGAGGGAGATGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCRKESQ*REMGVG
Trigger: CCCCACCCCCATCTCCCTGCACTGACTCTCTTTTCG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCACACCAGTACATGCTaGGGGGTCTTTGCGACATGC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVHTSTC*GVFATC
Trigger: GCATGTCGCAAAGACCCCCCAGCATGTACTGGTGTG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRCHHG*VVIRGL
Trigger: GAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGGGTCGCCAGGCAGTTaGCAGAAAGGTCGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTGSPGS*QKGRAP
Trigger: CGGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGATCTCCAGGAGGGTaGACTTGCCCTGGCGCGGGG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLRSPGG*TCPGAG
Trigger: CCCCGCGCCAGGGCAAGTCCACCCTCCTGGAGATCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCAGCACCACGGCGTTTaGGGCCTTGGCCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTQHHGV*GLGLDV
Trigger: AACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGTCGCTGGCAGCCGATaGTGCTGCCCACGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTVAGSR*CCPRPS
Trigger: TGAAGGACGTGGGCAGCACCATCGGCTGCCAGCGAC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGCGCGTGCAGCATGCTaGCCTCCTGCCGGAACTCGG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSARAAC*PPAGTR
Trigger: CCGAGTTCCGGCAGGAGGCCAGCATGCTGCACGCGC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGCCTAGGGCGCCCTCATaGAATGACTGCCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRPRAPS*NDCLEI
Trigger: GATTTCGAGGCAGTCATTCCATGAGGGCGCCCTAGG...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGCAGCGGTCGCTTCTCTaGCTTAGTGTCCCAGCACTC +
Preference number: 4 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLQRSLL*LSVPAL
Trigger: GAGTGCTGGGACACTAAGCCAGAGAAGCGACCGCTG...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAVHRDL*TWSWQL
Trigger: GAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGAC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGTATCCAAGGCCTGTTaGGGTGTGTTTAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQVSKAC*GVFKGH
Trigger: GTGCCCCTTAAACACACCCCAACAGGCCTTGGATAC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGAGCAGCTGTCCTTTaGGGTGCCCCGCACCACGGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGAAVL*GAPHHG
Trigger: CCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCTCCATGGCCTTCACTaGGTAGGGGTTCTGCCGTGC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTLHGLH*VGVLPC
Trigger: GCACGGCAGAACCCCTACCCAGTGAAGGCCATGGAG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RLISIRAINLCQKPTGTKTSPRS*PCHPGT
Trigger: GGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGT...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGPLRHL*VGRVAG
Trigger: GCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGTGAGTGATTCCTGGTaGATCAGGATCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVVSDSW*IRICVP
Trigger: GGGCACGCAGATCCTGATCCACCAGGAATCACTCAC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAAATGTCGAACTCCCTaGCGCCCCAGCCCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAKCRTP*RPSPSR
Trigger: TCTGGAGGGGCTGGGGCGCCAGGGAGTTCGACATTT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTGCCTCTGGGCTTGCTaGCGGTGGCACTTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVCLWAC*RWHLKE
Trigger: TTCCTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCCCAGGCTAGAAAGCTaGTGTGATCATAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWPRLES*CDHSSL
Trigger: CAGTGAGCTATGATCACACCAGCTTTCTAGCCTGGG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGAAGGAGATGCTGGCTaGTTACCACCCTCTGCCAAC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVEGDAG*LPPSAN
Trigger: GTTGGCAGAGGGTGGTAACCAGCCAGCATCTCCTTC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGATTATCCAGGCATTGTaGTGCACGCCTGTAATCGCA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILIIQAL*CTPVIA
Trigger: TGCGATTACAGGCGTGCACCACAATGCCTGGATAAT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACTTAAGTGGAACTGCTaGGTCAGAGGGTATGTGCAT +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGLKWNC*VRGYVH
Trigger: ATGCACATACCCTCTGACCCAGCAGTTCCACTTAAG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCTTAAGTGGAACTGCTaGGTCAGAGGGTATGTGCAT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFLKWNC*VRGYVH
Trigger: ATGCACATACCCTCTGACCCAGCAGTTCCACTTAAG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTTAAGAGAAAATTGCTaGGCAGGTAGGGGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPLRENC*AGRGGL
Trigger: TAGCCCTCCCCTACCTGCCCAGCAATTTTCTCTTAA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGAGGCATTCCTTGGCCTaGTGGCCAGATTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVRHSLA*WPDFWH
Trigger: GTGCCAGAAATCTGGCCACCAGGCCAAGGAATGCCT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTACACAAAGGAGGCTTTaGATTGGGAAGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFTQRRL*IGKKGS
Trigger: ACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTAGGACAAGTGAAATaGGGGAATTGTAAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELGQVK*GNCKES
Trigger: ACTCTCCTTACAATTCCCCCATTTCACTTGTCCTAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCCACAATAATGGATTATaGAGTGAGGTATTGAGGATA +
Preference number: 4 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPHNNGL*SEVLRI
Trigger: TATCCTCAATACCTCACTCCATAATCCATTATTGTG...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGGGGTGAACGTCAGGTaGATCAGAGAGATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQGVNVR*IREMQS
Trigger: TGACTGCATCTCTCTGATCCACCTGACGTTCACCCC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTGTGGAGAGAGAGAATaGGCGATGTTTCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWCGERE*AMFLRA
Trigger: AGCCCTGAGAAACATCGCCCATTCTCTCTCTCCACA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGTGCGATGGCTTAGCTTaGGCTCAGAGGCCTGACATT +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQCDGLA*AQRPDI
Trigger: AATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCGCA...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRDWLQ*STFSAD
Trigger: ATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGCAGTTTTTGAAGTTTTaGGAGGTGCAAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMQFLKF*EVQESR
Trigger: CCTGGATTCTTGCACCTCTCAAAACTTCAAAAACTG...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGCCAGGGGAACTTCTTTaGGTGCGTTTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRPGELL*VRFLRN
Trigger: ATTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGG...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGAGATCCAGGGTTTTaGGCTGCCTGCAGGTCCACT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRDPGF*AACRST
Trigger: AGTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCGGAAGATTCCACACTaGGGTAGCCCCCATCAAAAG +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVRKIPH*GSPHQK
Trigger: CTTTTGATGGGGGCTACCTCAGTGTGGAATCTTCCG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGTCTGGGGCAGGAGATaGAGTCCCGCTCGATGGCCG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEVWGRR*SPARWP
Trigger: CGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGAC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQRGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR TCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAGAGCTGCACACGACTaGCGTAACCATGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTRAAHD*RNHGGG
Trigger: GCCCCCTCCATGGTTACGTCAGTCGTGTGCAGCTCT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTTTAAGACGGCAATaGCTCGGCCCCGCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLLRRQ*LGPAGR
Trigger: GCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAAAG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAGTGGGGGAGCTTTTTaGGCCAGGATGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASGGAF*ARMSQE
Trigger: CTCCTGGCTCATCCTGGCTCAAAAAGCTCCCCCACT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAAAGGAGAAAGAGGTTaGGGGATAGTGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWKGERG*GIVREV
Trigger: AACCTCCCTCACTATCCCTCAACCTCTTTCTCCTTT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCAGGATGGAAAAATTaGAAGTGCTGTTTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFAGWKN*KCCFPA
Trigger: AGCCGGAAAACAGCACTTTCAATTTTTCCATCCTGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGGGAAACAGGCCCTTaGAAAGAAGGTAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRETGP*KEGNVE
Trigger: CTCCACATTACCTTCTTTTCAAGGGCCTGTTTCCCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTATGGTAAGGGGTGCATaGTCGGTCACCAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCMVRGA*SVTKEG
Trigger: TCCCTCCTTGGTGACCGATCATGCACCCCTTACCAT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGTGGGGAAATGGGGTaGACGTCAGGTGGATCAGAG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCCGEMG*TSGGSE
Trigger: CTCTGATCCACCTGACGTTCACCCCATTTCCCCACA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGACAGGCCTGAATTCTaGGAAGGGAAAGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFDRPEF*EGKVVK
Trigger: TTTTACCACTTTCCCTTCTCAGAATTCAGGCCTGTC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTTCCAAGGACAGGCCTaGATTCTGAGAAGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWFQGQA*ILRRES
Trigger: ACTTTCCCTTCTCAGAATTCAGGCCTGTCCTTGGAA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGAGAGCAGGGCACGTATaGGTAGTTGAGAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWRAGHV*VVENGE
Trigger: TTCACCATTCTCAACTACTCATACGTGCCCTGCTCT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGAAAGTTACATGGATTaGCACGTTCTGGTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSESYMD*HVLVGC
Trigger: ACAACCCACCAGAACGTGTCAATCCATGTAACTTTC...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCCGCTGGCTGTGGGGTaGATTAAGGCGTGGACTCGT +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTPLAVG*IKAWTR
Trigger: ACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGG...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp ATTTTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGTCCCGCTGTTGTCACTaGCACTGCCGCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILRVGCYKSEFFPLSVCWSRCCH*HCRWLW
Trigger: CCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGA...CCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYVSKIR*HHGWVV
Trigger: GACAACCCAGCCGTGGTGGCAGCGTATTTTGGACAC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATTTCTTTTTGGATTTCTaGAGGCACATTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHFFLDF*RHIADG
Trigger: ACCATCAGCAATGTGCCTGCAGAAATCCAAAAAGAA...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGGGGAGCGGCAGAGTaGCAGCACATAGGCACGCAG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGGAAE*QHIGTQ
Trigger: CTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCGACCTTCCAGGCTCTTaGAGGAAATCTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSDLPGS*RKSHVS
Trigger: ACTTACATGAGATTTCCTGCAAGAGCCTGGAAGGTC...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCCGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACG +
Preference number: 4 (lower is better)
Translates to: AILSTRNLASIKSRCVPTRAINL*QKPTGT
Trigger: CGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGTATTCAGAGAACTCTaGTCCAGAGAACCAGAGAAC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFVFREL*SREPEN
Trigger: GTTCTCTGGTTCTCTGGAGCAGAGTTCTCTGAATAC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGGCTTTAAAAGGCCATaGTGTAGCAGGAGAGTGATA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGGFKRP*CSRRVI
Trigger: TATCACTCTCCTGCTACAGCATGGCCTTTTAAAGCC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGTGGGGGCGGCAAGGTaGTCAGTGGGGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTVGAAR*SVGVLF
Trigger: AAAAAGCACCCCCACTGAGCACCTTGCCGCCCCCAC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGATTCCAGGGCATTTCTaGAAGCTTTACAACATTTCA +
Preference number: 4 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQIPGHF*KLYNIS
Trigger: TGAAATGTTGTAAAGCTTCCAGAAATGCCCTGGAAT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCAAGACAGCATTGCTTTaGGGCCTTCTTTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPKTALL*GLLFGF
Trigger: AAATCCAAAAAGAAGGCCCCAAAGCAATGCTGTCTT...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCTGGTGTCCGGGAAATaGAGCAGGGTGCCGGTTTCT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTLVSGK*SRVPVS
Trigger: AGAAACCGGCACCCTGCTCCATTTCCCGGACACCAG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGCAGGCCAGGTTTAGATaGAAGGAGATGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLQARFR*KEMGQE
Trigger: CTCCTGCCCCATCTCCTTCCATCTAAACCTGGCCTG...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCCCTCTGAATGGTGTTaGCTGTGGGGTGCCGCATAC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAPSEWC*LWGAAY
Trigger: GTATGCGGCACCCCACAGCCAACACCATTCAGAGGG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGATCAAGGAATTGACGTaGTCCGTGATGAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILIKELT*SVMKAM
Trigger: CATGGCTTTCATCACGGACCACGTCAATTCCTTGAT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCATCAAGGAATTGACGTaGTCCGTGATGAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPIKELT*SVMKAM
Trigger: CATGGCTTTCATCACGGACCACGTCAATTCCTTGAT...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCCGGGCGGATGCCCTTaGACAGCTTCTTGGCAATCT +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTPGGCP*TASWQS
Trigger: AGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGG...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLTTVYS*PWDEKK
Trigger: CTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGT...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAGGGATCTCTGGACCTaGAGCTGGCAGCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARDLWT*SWQLTF
Trigger: GAAGGTGAGCTGCCAGCTCCAGGTCCAGAGATCCCT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCCCCTCAGGCACCTTTaGGTTGGCCGTGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSPLRHL*VGRVAG
Trigger: GCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTGGAGAAAGGCACACTaGAAGAACTTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGWRKAH*KNLLGS
Trigger: GCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCA...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTTGGCTTGCCCAAGCTaGCCCAGGCCTCGGGGACTC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLACPS*PRPRGL
Trigger: GAGTCCCCGAGGCCTGGGCCAGCTTGGGCAAGCCAA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAACTCATTCATTCTCTaGATGGGGCAACACTCCTCA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILNSFIL*MGQHSS
Trigger: TGAGGAGTGTTGCCCCATCCAGAGAATGAATGAGTT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAACTCATTCATTCTCTaGATGGGGCAACACTCCTCA +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPNSFIL*MGQHSS
Trigger: TGAGGAGTGTTGCCCCATCCAGAGAATGAATGAGTT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTTCAAACTCCCATTCTaGTTTAAGGAGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFFKLPF*FKEPQR
Trigger: CCTTTGGGGCTCCTTAAACCAGAATGGGAGTTTGAA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTCAACAAACTTCAGCTaGAGTATGATCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PWPGGQISGTCSKLLGEESTNFS*SMISLS
Trigger: TGAAAGAGAGATCATACTCCAGCTGAAGTTTGTTGA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATCCCCAGACAGCGAGTaGGTCTGGGAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLSPDSE*VWEGLS
Trigger: GCTCAGTCCCTCCCAGACCCACTCGCTGTCTGGGGA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGGCCACCTGCATGTTaGCACAGTGGGCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGPPAC*HSGQGG
Trigger: CCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGTCCTGCCTTGGCTCCTaGGTAGCTGGGACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTSCLGS*VAGTLG
Trigger: GCCTAAAGTCCCAGCTACCCAGGAGCCAAGGCAGGA...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACAGAGATATAAGAGGTaGGGGCATGGAAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGQRYKR*GHGNKG
Trigger: TCCCTTATTTCCATGCCCCCACCTCTTATATCTCTG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGACACAAAGGAGGCTTTaGATTGGGAAGAAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWTQRRL*IGKKGS
Trigger: ACTGCCCTTCTTCCCAATCCAAAGCCTCCTTTGTGT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGATAGATTTCCACGATaGAAAGGAAATGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHDRFPR*KGNERF
Trigger: GAACCTCTCATTTCCTTTCCATCGTGGAAATCTATC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCAGCTGTGATGGCTTaGAGAAACAGTGTAAACTGG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSAVMA*RNSVNW
Trigger: CCAGTTTACACTGTTTCTCCAAGCCATCACAGCTGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCGGCAAGGTGCTCAGTaGGGGTGCTTTTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARQGAQ*GCFLSQ
Trigger: CTGGCTCAAAAAGCACCCCCACTGAGCACCTTGCCG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTGCATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGACTTCTCAATCCTCTCTCAGTCTGTTaGTCTCTTGCCCTCCACCTT +
Preference number: 4 (lower is better)
Translates to: HCMKALTRYQHYALGLLNPLSVC*SLALHL
Trigger: AAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGG...ATTGAGAAGTCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
3UTR CAA 72 bp GCCTGCCTCTTTGACAGGCTGCAGAGGATGGCACTGTaGCATGTGCAGGAATTTTATGACCTCCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: ACLFDRLQRMAL*HVQEFYDLPHD
Trigger: ATCATGAGGGAGGTCATAAAATTCCTGCACATGCAACAGTGCCATCCTCTGCAGCCTGTCAAAGAGGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp CTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAA +
Preference number: 4 (lower is better)
Translates to: LRQADQHPCYKP*PEANGNEAHLK
Trigger: TTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTaGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SGISQAIPMRMH*DLGIPYGSWKV
Trigger: AACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVTRSHG*AESFLA
Trigger: AGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTPPVSC*VGSGPS
Trigger: AGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCTTCATTCCCTGACTTaGTGGCCGCATACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTLHSLT*WPHTGA
Trigger: TGCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGAAGCTGTCAGTTTTTaGAGTTTTGAGAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPEAVSF*SFERCK
Trigger: CTTGCACCTCTCAAAACTTCAAAAACTGACAGCTTC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATAAACCTTTGCTTTGAGTGCGTTTTCTaGGAAATCCACATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SCRSISARLISIRAINLCFECVF*EIHILQ
Trigger: CTGAAGGATGTGGATTTCTCAGAAAACGCACTCAAA...GCAAAGGTTTATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLAGDPR*SSSSAC
Trigger: GCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCGATGTCCCAGACGTTaGACTCCACGGACTCAACCT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTRCPRR*TPRTQP
Trigger: AGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGGAGGAAGCTGATGGCTaGCTGCAGGTCCTCGTAGTC +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLEEADG*LQVLVV
Trigger: GACTACGAGGACCTGCAGTCAGCCATCAGCTTCCTC...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGCACGTACTGCTCCATaGGTGGCGTCCCGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEARTAP*VASRRS
Trigger: AGAGCGACGGGACGCCACTCATGGAGCAGTACGTGC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGAGGGGCACATGCCCTTaGGGGTGTAGATGTAGATTT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVRGTCP*GCRCRF
Trigger: AAATCTACATCTACACCCTCAAGGGCATGTGCCCCT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGCGGCCAAGAAGCAGGTaGCGACAGCTGGAGTATCCA +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLRPRSR*RQLEYP
Trigger: TGGATACTCCAGCTGTCGTCACCTGCTTCTTGGCCG...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTGGAGCAGTAGTCAGTaGGTGATTCCTGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGWSSSQ*VIPGGS
Trigger: TGATCCACCAGGAATCACTCACTGACTACTGCTCCA...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCCTGCTCCTGCAAACTaGTGGGGGAGGCCAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSPAPAN*WGRPEE
Trigger: CTCCTCTGGCCTCCCCCATCAGTTTGCAGGAGCAGG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLGSEA*RTVLQA
Trigger: AGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTTGGGCTCAGAGGCCTaGCGCACTGTGCTGCAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSELGSEA*RTVLQA
Trigger: AGCTTGCAGCACAGTGCGTCAGGCCTCTGAGCCCAA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCGAAAAGGGAGTCAGTaGAGGGAGATAGGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARKGSQ*REIGVR
Trigger: CCTCACGCCTATCTCCCTTCACTGACTCCCTTTTCG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGAGAGTATATGGGTTTaGCACCATGGGGTGGATAGG +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVESIWV*HHGVDR
Trigger: CCTATCCACCCCATGGTGTCAAACCCATATACTCTC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCCGAGGAATTATGTTTaGCAGAAGGGAAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFPRNYV*QKGRND
Trigger: GTCATTTCTTCCCTTCTGTCAAACATAATTCCTCGG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTCCCGCTGTTGTCACTaGCACTGCCGCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAESRCCH*HCRWLW
Trigger: CCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCCAGCCATCAACCCTTaGAGCAGCCGATCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYPAINP*SSRSSK
Trigger: CTTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCATAGGCTGCCGGGATaGTCAGAAGCTGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTHRLPG*SEAGPF
Trigger: AAAAGGGCCAGCTTCTGAGCATCCCGGCAGCCTATG...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATAGAAGCCGCTGGGGACTaGAGGGACCTGGTAAGGACT +
Preference number: 4 (lower is better)
Translates to: YQHYALGLLNLQTCKPNIEAAGD*RDLVRT
Trigger: AGTCCTTACCAGGTCCCTGCAGTCCCCAGCGGCTTC...TATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GAGTTCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTTTTTTCCCGGATAACTaGTGGGCAAGGGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: EFFPLSVCWSLALHLHITFFPDN*WARDWL
Trigger: AAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAA...AGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGAACTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCTTGAGGTGGAAGTaGCGCCAGCTGGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLLRWK*RQLVPL
Trigger: CAGGGGAACCAGCTGGCGGCACTTCCACCTCAAGAG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCGTCCATCTTCATTTTTaGCAAGTTGGTTTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSVHLHF*QVGFWR
Trigger: TCTCCAGAAACCAACTTGGCAAAAATGAAGATGGAC...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGATAGGCACGCAGCGTTaGAATCCTTTCCACACGGAA +
Preference number: 4 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGIGTQR*NPFHTE
Trigger: TTCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTAT...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGGAACTGGAAGTACTaGTCTTCCGTCTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRNWKY*SSVCCV
Trigger: CACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCCATGTCGAAGTACTaGACATCCTCTGATTTCTCA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSMSKY*TSSDFS
Trigger: TGAGAAATCAGAGGATGTGCAGTACTTCGACATGGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTAGCTGTCCTTTGGGGTaGCCCGCACCACGGGAAACA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGSCPLG*PAPRET
Trigger: TGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTTCTGGTGGGTTGTTTATAGGATCTTCACGGCCTaGAGGTGCTGGCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: PYGSWKVTWIDTFWWVVYRIFTA*RCWLKV
Trigger: GACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCT...ATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTACCTTCTCTTGCGAGTaGAAGCCTCCAGCCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGTFSCE*KPPAGP
Trigger: TGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCGGAATTACCTTCTCTTaGGAGTGCAAGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVGITFS*ECKPPA
Trigger: GGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCC...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTGCACTCGGACTGTGTaGCTCTGGGCTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAECTRTV*LWACWR
Trigger: CCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTGCACTCGGACTGTGTaGCTCTGGGCTTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSCTRTV*LWACWR
Trigger: CCGCCAGCAAGCCCAGAGGCACACAGTCCGAGTGCA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCCGCTGTACACGTGTaGAGTGAATGTTTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSAVHV*SECLAN
Trigger: ATTTGCTAAACATTCACTGCACACGTGTACAGCGGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGGACTCCTGAGACCCTaGTGTGGGATGAGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTGLLRP*CGMRVR
Trigger: TCTCACCCTCATCCCACAGCAGGGTCTCAGGAGTCC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACATGTGCAAGGCCCTTaGACCCAGTGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLHVQGP*TQCPQS
Trigger: GCTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAGAGTAAAAAGAGGCTaGTTACTGGATTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRVKRG*LLDLKL
Trigger: CAATTTCAAATCCAGTAAGCAGCCTCTTTTTACTCT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGGAATGCCTGGCCGCTaGAGTTCAGGTGTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTGMPGR*SSGVWK
Trigger: CTTCCAAACACCTGAACTGCAGCGGCCAGGCATTCC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGCTCTGGGAGTGGCTaGCAGGTGAGTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGSGSG*QVSWTV
Trigger: GACTGTCCAACTCACCTGGCAGCCACTCCCAGAGCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGGCTGGGATGAAGGGTaGAAAGGAATAGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILGWDEG*KGIVKK
Trigger: TTTCTTTACTATTCCTTTGCACCCTTCATCCCAGCC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGTGGGGGCGGCAAGGTaGTCAGTGGGGGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGVGAAR*SVGVLF
Trigger: AAAAAGCACCCCCACTGAGCACCTTGCCGCCCCCAC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCCGGACAGGCCACCCTaGCCAGCATACCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGPDRPP*PAYLHR
Trigger: TCTGTGAAGGTATGCTGGGCAGGGTGGCCTGTCCGG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCACTGCCGCTGGCTGTaGGGTGCATTAAGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEHCRWL*GALRRG
Trigger: TCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp ATTTTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGCACTGCCACTGCCGCTaGCTGTGGGGTGCATTAAGG +
Preference number: 4 (lower is better)
Translates to: ILRVGCYKSEFFPLSVCWHCHCR*LWGALR
Trigger: CCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTG...CCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCTCGAGCTCCGTGATCTaGCAGGAGATGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVSSSVI*QEMSMS
Trigger: GCTCATAGACATCTCCTGCCAGATCACGGAGCTCGA...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTCAGTCCCGGAGCGCTaGCGACCTCTGGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSESVPER*RPLVVK
Trigger: TTTCACCACCAGAGGTCGCCAGCGCTCCGGGACTGA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCGGGACTGTGTCGAGGTaGTTGTCGTTCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTGTVSR*LSFRQR
Trigger: CCTTTGCCTGAACGACAACCACCTCGACACAGTCCC...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCAGCACCACGGCGTTTaGGGCCTTGGCCTCGATGTT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEQHHGV*GLGLDV
Trigger: AACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTATCTGGAGCTGGTGGTaGCCCAGTGCAGGGCGCTGT +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSIWSWW*PSAGRC
Trigger: ACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGAT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGACCACGGTGTACTCCTaGCCCTGGGATGAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQATTVYS*PWDEKK
Trigger: CTTCTTCTCATCCCAGGGCCAGGAGTACACCGTGGT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCCACCGTGTAGTTCCTaGACTCCTCTTTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYPPCSS*TPLFHP
Trigger: GGGATGGAAAAGAGGAGTCCAGGAACTACACGGTGG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGTCCACAGGGATCTCTaGACCTGGAGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEVHRDL*TWSWQL
Trigger: GAGCTGCCAGCTCCAGGTCCAGAGATCCCTGTGGAC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTTTTCTGGTCCTCGGTaGCTGTCCACAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYFSGPR*LSTGIS
Trigger: AGAGATCCCTGTGGACAGCCACCGAGGACCAGAAAA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGTATCCAAGGCCTGTTaGGGTGTGTTTAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCVSKAC*GVFKGH
Trigger: GTGCCCCTTAAACACACCCCAACAGGCCTTGGATAC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAACTTGCTGGGGAGCTaGGGAGGCTTGAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSNLLGS*GGLRGT
Trigger: GGTCCCCCTCAAGCCTCCCCAGCTCCCCAGCAAGTT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTATGACTCGGCCCCGCTaGGCGCCAGAATCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSMTRPR*APESFS
Trigger: GGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCAT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGGAGAGGGTGAATTTTaGTGCCTGCAAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYGEGEF*CLQSSL
Trigger: CAGGCTGCTTTGCAGGCACCAAAATTCACCCTCTCC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTCACATTGTACCTCCTaGTGCAGGCTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTSHCTS*CRLQAS
Trigger: CGAGGCCTGCAGCCTGCACCAGGAGGTACAATGTGA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTCACAGGGGATGCGATaGCTTGGCTTGGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTSQGMR*LGLGSE
Trigger: CTCTGAGCCCAAGCCAAGCCATCGCATCCCCTGTGA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGTGGATCTTTCTCATaGACCAAAGAGCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVGGSFS*TKEQED
Trigger: GTCCTCCTGCTCTTTGGTCCATGAGAAAGATCCACC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGAAAGAAGGAAGATTTaGGATGAGTTGCACTGGGAA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGERRKI*DELHWE
Trigger: TTCCCAGTGCAACTCATCCCAAATCTTCCTTCTTTC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSQGLWE*LPGELD
Trigger: GTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEQGLWE*LPGELD
Trigger: GTCCAACTCACCTGGCAGCCACTCCCAGAGCCCCTG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCACAATAATGGATTATaGAGTGAGGTATTGAGGATA +
Preference number: 4 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHHNNGL*SEVLRI
Trigger: TATCCTCAATACCTCACTCCATAATCCATTATTGTG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGCGATGGCTTAGCTTaGGCTCAGAGGCCTGACATT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCCDGLA*AQRPDI
Trigger: AATGTCAGGCCTCTGAGCCCAAGCTAAGCCATCGCA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp CACAGAGATAAGAGGTTGGGGCACAGAAATAAGGGATaGGGGCGCAGAGATATGAGGTTGGAGTACTTGCTC +
Preference number: 4 (lower is better)
Translates to: HRDKRLGHRNKG*GRRDMRLEYLL
Trigger: GAGCAAGTACTCCAACCTCATATCTCTGCGCCCCAATCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AGTTATCTGACTCGGGGCATGTTGAGTAAAGTCAATTaGCCAGTCCTGGGTGGAGGCAAATCCCTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SYLTRGMLSKVN*PVLGGGKSLSL
Trigger: CAAGCTCAGGGATTTGCCTCCACCCAGGACTGGCAAATTGACTTTACTCAACATGCCCCGAGTCAGATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGTCTCTaGCCCTCCACCTTCATATCACTGCATGAAGGCCCT +
Preference number: 4 (lower is better)
Translates to: KVSSSLSQSVGL*PSTFISLHEGP
Trigger: AGGGCCTTCATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGAACTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
3UTR CAA 72 bp ATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTaGGGGATCCCCTATGGGTCTTGGAAAGTTACATGG +
Preference number: 4 (lower is better)
Translates to: ISQAIPMRMHLD*GIPYGSWKVTW
Trigger: CCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTTCTGGACACACAGCTaGCTCCTCCGGCCCCACACA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEFWTHS*LLRPHT
Trigger: TGTGTGGGGCCGGAGGAGTCAGCTGTGTGTCCAGAA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGTAGCCTGGAACAGATaGTTTCGTCCGATGACTGCA +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCVAWNR*FRPMTA
Trigger: TGCAGTCATCGGACGAAATCATCTGTTCCAGGCTAC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCAGTTTTTGAAGTTTTaGGAGGTGCAAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWQFLKF*EVQESR
Trigger: CCTGGATTCTTGCACCTCTCAAAACTTCAAAAACTG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTTTGAGTGCGTTTTCTaGGAAATCCACATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWFECVF*EIHILQ
Trigger: CTGAAGGATGTGGATTTCTCAGAAAACGCACTCAAA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCAGGTCCACTTCTCTTaGGGTGGAAGTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSQVHFS*GGSAAS
Trigger: GCTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGATTTCTTTTCACTCTaGATGTGCTACAGCGATTTC +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGDFFSL*MCYSDF
Trigger: GAAATCGCTGTAGCACATTCAGAGTGAAAAGAAATC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGGAAGTCCCTCACTTCTaGTTGGCAAACAATTTTCAT +
Preference number: 4 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPEVPHF*LANNFH
Trigger: ATGAAAATTGTTTGCCAATCAGAAGTGAGGGACTTC...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGATACAATGCGAGGCCTaGTCTCTGGGGCCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEIQCEA*SLGPGS
Trigger: GCTACCAGGCCCCAGAGATCAGGCCTCGCATTGTAT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGCCTGTGGAATGTGCTaGGAGCCTGAGGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSACGMC*EPEVSG
Trigger: GCCAGAGACCTCAGGCTCTCAGCACATTCCACAGGC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAAATCCCATACAATGTaGTTTCACAACCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACKSHTM*FHNQKP
Trigger: AGGCTTCTGGTTGTGAAATCACATTGTATGGGATTT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATTCCAAGCCTGTGACTaGCAGAGCAGCGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLFQACD*QSSVST
Trigger: GGTGGAGACGCTGCTCTGTCAGTCACAGGCTTGGAA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCTTTTTCCAAGCCTGTaGCTGACAGAGCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALFPSL*LTEQRL
Trigger: GAGACGCTGCTCTGTCAGTCACAGGCTTGGAAAAAG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTGGGCTGGTTGGTCTaGGGACTTGAGGTTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALGWLV*GLEVVG
Trigger: ACCTACAACCTCAAGTCCTCAGACCAACCAGCCCAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTGAAGAGAGGCTGGGATaGAGGGTGCAAAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCEERLG*RVQRNS
Trigger: ACTATTCCTTTGCACCCTTCATCCCAGCCTCTCTTC...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAATGGGGGCTGTCTGTaGAGCTTTGGGGCAGTACAG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTNGGCL*SFGAVQ
Trigger: CTGTACTGCCCCAAAGCTTCACAGACAGCCCCCATT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCCGAGGAATTATGTTTaGCAGAAGGGAAGAAATGAC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWPRNYV*QKGRND
Trigger: GTCATTTCTTCCCTTCTGTCAAACATAATTCCTCGG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCCGTTCTACCTTTCCTaGAGGCTGAGGACTGTAAGG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAPFYLS*RLRTVR
Trigger: CCTTACAGTCCTCAGCCTTCAGGAAAGGTAGAACGG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGATGACTCAGGACATCTaGTTAGAGAGTGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQMTQDI*LESAKG
Trigger: TCCTTTGGCACTCTCTAATCAGATGTCCTGAGTCAT...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCCAGCCATCAACCCTTaGAGCAGCCGATCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTPAINP*SSRSSK
Trigger: CTTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp ACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATCAGATCCCCATAGGCTaGCGGGATGCTCAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: TSTMLLDFSISRPVSQIYQIPIG*RDAQKL
Trigger: CAGCTTCTGAGCATCCCGGCAGCCTATGGGGATCTG...ATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGACTCAAGCAATTCCTaGACAACTGCCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYDSSNS*TTAVCP
Trigger: TGGACACACGGCAGTTGTGCAGGAATTGCTTGAGTC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CACTGCATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGACTTCTCAATTTCTCAGCAGATGTTTaGTGGGGTCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: HCMKALTRYQHYALGLLNFSADV*WGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAA...ATTGAGAAGTCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGGTGGGACAACTTGTTaGTGGAAATGTCAATTTCAA +
Preference number: 4 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQGGTTC*WKCQFQ
Trigger: TTGAAATTGACATTTCCAGCAACAAGTTGTCCCACC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCCAGGGTTTTGAGCTaGCTGCAGGTCCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASRVLS*LQVHFS
Trigger: AGAGAAGTGGACCTGCAGGCAGCTCAAAACCCTGGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGTCATCTTCATCAGCTTaGACTTTTCCGCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: RLISIRAINLCQKPTGTKSSSSA*TFPLSA
Trigger: TGCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGA...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSILKIL*RHSESQ
Trigger: TTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATAT...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGAGAAGAAGGCTGTCTaGTTCCCACAGCACAGTTCA +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYEKKAV*FPQHSS
Trigger: TGAACTGTGCTGTGGGAAGCAGACAGCCTTCTTCTC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGTGTGCCTCTGGGCTTaGTGGCGGTGGCACTTAAAG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGVCLWA*WRWHLK
Trigger: CTTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACAC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGAGGGACTGAGCCCGTaGTGTGGTCATAAGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGEGLSP*CGHKRS
Trigger: TGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGGGACCATGCTGAATaGTGGGCCCATCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSERDHAE*WAHPSN
Trigger: GTTGCTGGGATGGGCCCAGCATTCAGCATGGTCCCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCATTGTACCTCCTGGTaGAGGCTGCAGGCCTCGCCA +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHCTSW*RLQASP
Trigger: TGGCGAGGCCTGCAGCCTGCACCAGGAGGTACAATG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAGGCCTGACGCACTGTaGTGCAAGCTGCTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARPDAL*CKLLSN
Trigger: GTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTTGGAAGTTCTTGTGTaGTGGAGATGTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCLEVLV*WRCGWG
Trigger: ACCCCAGCCACATCTCCAGCACACAAGAACTTCCAA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGAGGAATCCTGGGCTaGAGGCATTCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGGILG*RHSLAW
Trigger: CCAGGCCAAGGAATGCCTGCAGCCCAGGATTCCTCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCGAGCTCCGTGATCTaGCAGGAGATGTCTATGAGC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASSSVI*QEMSMS
Trigger: GCTCATAGACATCTCCTGCCAGATCACGGAGCTCGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGTCATTTTTGCCAAGTTaGTTTCTGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWSFLPS*FLERSR
Trigger: CCTGGATCTCTCCAGAAACCAACTTGGCAAAAATGA...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAAGACAGCATTGCTTTaGGGCCTTCTTTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILKTALL*GLLFGF
Trigger: AAATCCAAAAAGAAGGCCCCAAAGCAATGCTGTCTT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTTTCCACACGGAACTTaGCTTCAATTAAATCCAGGT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACFPHGT*LQLNPG
Trigger: ACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAGGTTCCTCAGGCCGTaGCTGGTGTCCGGGAAATGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAERFLRP*LVSGKW
Trigger: CCATTTCCCGGACACCAGCCACGGCCTGAGGAACCT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCGGAGAAGTTCTTCATaGCATCGGTGGCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRRSSS*HRWPAG
Trigger: ACCTGCGGGCCACCGATGCCATGAAGAACTTCTCCG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGTATCCAAGGCCTGTTaGGGTGTGTTTAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAVSKAC*GVFKGH
Trigger: GTGCCCCTTAAACACACCCCAACAGGCCTTGGATAC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGCAGGTGACGACAGCTaGAGTATCCAAGGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTAGDDS*SIQGLL
Trigger: CAACAGGCCTTGGATACTCCAGCTGTCGTCACCTGC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGTCTTCTAGGTCCTTaGAGAACTAGAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCCLLGP*RTRGRW
Trigger: CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAGAACCAGAGAACCCTaGAGCCACCGCCAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSRTREP*SHRQAS
Trigger: ACTCGCCTGGCGGTGGCTCCAGGGTTCTCTGGTTCT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGGGCTTGCTGGCGGTaGCACTTAAAGGAACTCATT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCWACWR*HLKELI
Trigger: AATGAGTTCCTTTAAGTGCCACCGCCAGCAAGCCCA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCATCTGGGGGTTAACTaGGCAGTTGTGGGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGHLGVN*AVVGHW
Trigger: CCAGTGCCCCACAACTGCCCAGTTAACCCCCAGATG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGCCAAAGCAAAAGCTTaGGGCCTGGGGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTAKAKA*GLGQME
Trigger: TTCCATCTGCCCCAGGCCCCAAGCTTTTGCTTTGGC...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTTAAGAAGGAGATGCTaGCTGGTTACCACCCTCTGC +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCLRRRC*LVTTLC
Trigger: GCAGAGGGTGGTAACCAGCCAGCATCTCCTTCTTAA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCTTGTTCTGTATCTTTaGGCACTTTTACCAAGATTT +
Preference number: 4 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHLVLYL*ALLPRF
Trigger: AAATCTTGGTAAAAGTGCCCAAAGATACAGAACAAG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTACGGAGAGAAGGGGTTaGGGTCCTTGCCCATTCCCC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSTERRG*GPCPFP
Trigger: GGGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAAACGAGGCATGAACTaGGCTGGGTTTTTATATTTG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACKRGMN*AGFLYL
Trigger: CAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTACAGGGTGCGGTCCTaGCTCTTGTGTAAGAATTCT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVYRVRS*LLCKNS
Trigger: AGAATTCTTACACAAGAGCCAGGACCGCACCCTGTA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTAGAGAGATGCAGTCATaGGGGTCAGGTGTGGTATCA +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCREMQS*GSGVVS
Trigger: TGATACCACACCTGACCCCCATGACTGCATCTCTCT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGATAGATTTCCACGATaGAAAGGAAATGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFDRFPR*KGNERF
Trigger: GAACCTCTCATTTCCTTTCCATCGTGGAAATCTATC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AATGCACGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACAAGGCTGTTTATTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: NARPCEETTKQA*CEQQGCLFHLG
Trigger: GCCCAGGTGAAATAAACAGCCTTGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGTGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AGCATCCTGAGGTCTTCTGCTCTGATCACCCCATTCTaGGCCACTGACCGAGAGCCCTTAATATTAAAGATC +
Preference number: 4 (lower is better)
Translates to: SILRSSALITPF*ATDREPLILKI
Trigger: GATCTTTAATATTAAGGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCCAGGGGAACTTCTTTaGGTGCGTTTTCTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVPGELL*VRFLRN
Trigger: ATTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCGATGTCCCAGACGTTaGACTCCACGGACTCAACCT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRCPRR*TPRTQP
Trigger: AGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGASKFT*QSYKHK
Trigger: CTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATGTACACGTGTGCAGTaGATGTTTAGCAAATACATA +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGCTRVQ*MFSKYI
Trigger: TATGTATTTGCTAAACATTCACTGCACACGTGTACA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCAGCCTGGCCTCGCGTaGTGCCAAAGCAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEQPGLA*CQSKSL
Trigger: CAAGCTTTTGCTTTGGCATCACGCGAGGCCAGGCTG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAAACACAGAGATTCTTaGCTGTGTCTCCGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYKHRDS*LCLRSQ
Trigger: CTGTGACCGGAGACACAGTCAAGAATCTCTGTGTTT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTAGCCTAAACGCTATCTaGTTTGGGATAAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSLNAI*FGIKKK
Trigger: CTTTTTCTTTATCCCAAATCAGATAGCGTTTAGGCT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGAGGAACTGGAAGTACTaGTCTTCCGTCTGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLRNWKY*SSVCCV
Trigger: CACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCT...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCAGCTTGATGTTGATGTaGTCCTTGACGTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SVAILSTRNLASIKSRCVSLMLM*SLTSRD
Trigger: GTCCCTTGACGTCAAGGAGCACATCAACATCAAGCT...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCACAACAGTGTCCTTTaGCACCACGGCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGHNSVL*HHGSIH
Trigger: GTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCATCTGATCTTGGCTTaGCCAAGCTGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHLILA*PSWPRP
Trigger: AGGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGCAGTTAGTGCTGCCTaGCTCTTTGACAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGAVSAA*LFDRLQ
Trigger: CTGCAGCCTGTCAAAGAGGCAGGCAGCACTAACTGC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTGGAAGTTCTTGTGTaGTGGAGATGTGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALEVLV*WRCGWG
Trigger: ACCCCAGCCACATCTCCAGCACACAAGAACTTCCAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGTGGATCAGAGAGATaGAGTCATGGGGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGGSER*SHGGQV
Trigger: CACCTGACCCCCATGACTGCATCTCTCTGATCCACC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTATCTGGGCTTATATATaGGTGCAGGTCACAGGGGAT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCIWAYI*VQVTGD
Trigger: ATCCCCTGTGACCTGCACGCATATATAAGCCCAGAT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTCTGGGTTGTCATCCGTaGGCTCGGTGGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YALGLLNLQTCKPNIFLFLGCHP*ARWAAP
Trigger: TGGAGCTGCCCACCGAGCCCACGGATGACAACCCAG...AAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGATTCCAGGGCATTTCTaGAAGCTTTACAACATTTCA +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILIPGHF*KLYNIS
Trigger: TGAAATGTTGTAAAGCTTCCAGAAATGCCCTGGAAT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp GCACATCCTCTGCACCTCCATGAGGCCCTTCTCTGTGTTCACCACCGTGTAGTTATTCCAGGGCATTTCTaGAAGCTTTACAACATTTCA +
Preference number: 4 (lower is better)
Translates to: AHPLHLHEALLCVHHRVVIPGHF*KLYNIS
Trigger: TGAAATGTTGTAAAGCTTCCAGAAATGCCCTGGAAT...AACTACACGGTGGTGAACACAGAGAAGGGCCTCATGGAGGTGCAGAGGATGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGAAGTGCCGCCAGCTaGTTCCCCTGTAACCTCAAG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGSAAS*FPCNLK
Trigger: CTTGAGGTTACAGGGGAACCAGCTGGCGGCACTTCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLSFLAI*SWWWPS
Trigger: ACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTACAGCTGGTAGGTGGTaGAGTGGTACATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTTAGRW*SGTSPR
Trigger: CCTTGGTGATGTACCACTCCACCACCTACCAGCTGT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAGAACTAGAGGCCGATaGCAGAGGGGTCAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSRTRGR*QRGQAA
Trigger: TGCAGCCTGACCCCTCTGCCATCGGCCTCTAGTTCT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCATTCATTCTCTGGATaGGGCAACACTCCTCACCCG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTHSFSG*GNTPHP
Trigger: CGGGTGAGGAGTGTTGCCCCATCCAGAGAATGAATG...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTAACTGGGCAGTTGTaGGGCACTGGAATGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALTGQL*GTGMRG
Trigger: TCCTCTCATTCCAGTGCCCCACAACTGCCCAGTTAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGCCAAAGCAAAAGCTTaGGGCCTGGGGCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGAKAKA*GLGQME
Trigger: TTCCATCTGCCCCAGGCCCCAAGCTTTTGCTTTGGC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTCCTGCCTTGGCTCCTaGGTAGCTGGGACTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSSCLGS*VAGTLG
Trigger: GCCTAAAGTCCCAGCTACCCAGGAGCCAAGGCAGGA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTGGCAACGTGCTCAGTaGGGGAGCTTTTTGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGWQRAQ*GSFLSQ
Trigger: CTGGCTCAAAAAGCTCCCCCACTGAGCACGTTGCCA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTTCTGGAGGAATGCCTaGCCGCTGCAGTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGFWRNA*PLQFRC
Trigger: ACACCTGAACTGCAGCGGCCAGGCATTCCTCCAGAA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTCATTCCTTGGCCTGGTaGCCAGATTTCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTHSLAW*PDFWHL
Trigger: CAAGTGCCAGAAATCTGGCCACCAGGCCAAGGAATG...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGATAGGCAAAACAATGTaGTTGATAAGGCACAGATCC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWIGKTM*LIRHRS
Trigger: GGATCTGTGCCTTATCAACCACATTGTTTTGCCTAT...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGGAAATGTGGGGAAATaGGGTGAACGTCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTGNVGK*GERQVD
Trigger: ATCCACCTGACGTTCACCCCATTTCCCCACATTTCC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGACAGCCTGCCTTTGCTaGTGTGTGGCCATTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSETACLC*CVAIRP
Trigger: AGGCCTAATGGCCACACACCAGCAAAGGCAGGCTGT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGTGGAGAGAGAGAATaGGCGATGTTTCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQACGERE*AMFLRA
Trigger: AGCCCTGAGAAACATCGCCCATTCTCTCTCTCCACA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCTTCATTCCCTGACTTaGTGGCCGCATACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAELHSLT*WPHTGA
Trigger: TGCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCTACCCAGGGCAGTCTaGGATGGGACCATTTCACAC +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAELPRAV*DGTISH
Trigger: GTGTGAAATGGTCCCATCTCAGACTGCCCTGGGTAG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGCGACCTCTGGTGGTaGAAAAGGCAATACGCTTCG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGDLWW*KRQYAS
Trigger: CGAAGCGTATTGCCTTTTTCACCACCAGAGGTCGCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GCACGCAGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ARSVAILSTRNLASIKSRSGHRR*CFSCAG
Trigger: ACCTGCACAAGAAAAACATCATCTTCTGTGACCTGA...CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCTGCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTCCCACACAGTGGCTTaGACCCACAACAGGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSESHTVA*THNRVF
Trigger: AAAGACCCTGTTGTGGGTTCAAGCCACTGTGTGGGA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGATGGTAAGGGGTGCATaGTCGGTCACCAAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEMVRGA*SVTKEG
Trigger: TCCCTCCTTGGTGACCGATCATGCACCCCTTACCAT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTGTGGGAGGCTGGATTaGAGTCGGTGCCAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSECGRLD*SRCQEK
Trigger: TTTTTCCTGGCACCGACTTCAATCCAGCCTCCCACA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTATTCCGCTGGCTGTGGGGTaGATTAAGGCGTGGACTCGT +
Preference number: 4 (lower is better)
Translates to: ALGLLNLQTCKPNIFLFIPLAVG*IKAWTR
Trigger: ACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGG...AATAAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp ACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATCCAGCCATCAACCCTTaGAGCAGCCGATCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSTMLLDFSISRPVSQIYPAINP*SSRSSK
Trigger: CTTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGG...ATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGGGTCTTTGCGACATaGCAGCCATCAACCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGVFAT*QPSTLA
Trigger: TGCAAGGGTTGATGGCTGGCATGTCGCAAAGACCCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: VRTQSSMSKYCTSSDFSLADQHP*YKPLPE
Trigger: TTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGC...CAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGATCAGGATCTGCGTaGCCAGCTCCTCACTGTACA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGSGSA*PAPHCT
Trigger: TGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGTGAATTTTGGTGCCTaGAAAGCAGCCTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSVNFGA*KAAWPR
Trigger: GCGAGGCCAGGCTGCTTTGCAGGCACCAAAATTCAC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCTGGTTACCACCCTCTaGCAACATGAGGGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSELVTTL*QHEGGK
Trigger: CTTACCACCCTCATGTTGGCAGAGGGTGGTAACCAG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCCACAACAGGGTCTTTaGATGTGCAAGGCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGPQQGL*MCKALA
Trigger: TGCAAGGGCCTTGCACATGCAAAGACCCTGTTGTGG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCATATTCTAAGAGATaGTATAGTGAACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPYSKR*YSEHPC
Trigger: ACAAGGATGTTCACTATAGCATCTCTTAGAATATGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTGGCACTGTTGCATGTaGAGGAATTTTATGACCTCC +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYWHCCM*RNFMTS
Trigger: GGAGGTCATAAAATTCCTGCACATGCAACAGTGCCA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGAGTAAAAAGAGGCTaGTTACTGGATTTGAAATTG +
Preference number: 4 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRVKRG*LLDLKL
Trigger: CAATTTCAAATCCAGTAAGCAGCCTCTTTTTACTCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGAAGGTCTACAGGGTaGGGTCCTGGCTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSERRSTG*GPGSCV
Trigger: TACACAAGAGCCAGGACCGCACCCTGTAGACCTTCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTAGAAGGTCTACAGGGTaGGGTCCTGGCTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRRSTG*GPGSCV
Trigger: TACACAAGAGCCAGGACCGCACCCTGTAGACCTTCT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCATCAGATACCAGCACTATaGTCTTGGACTTCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SSLSQSVGLLPSTFISLHQIPAL*SWTSQS
Trigger: AGATTGAGAAGTCCAAGAGCATAGTGCTGGTATCTG...ATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp GCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTATTCAGTTCAGAAGCCGCTaGGGACTGCAGGGACCTGGT +
Preference number: 4 (lower is better)
Translates to: ALGLLNLQTCKPNIFLFIQFRSR*GLQGPG
Trigger: ACCAGGTCCCTGCAGTCCCCAGCGGCTTCTGAACTG...AATAAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp TACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTCCCGGATAACTGCTaGGCAAGGGACTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: YQHYALGLLNLQTCKPNIFPDNC*ARDWLQ
Trigger: TTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAA...TATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTTCATTTTTGCCAAGTTaGTTTCTGGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSSFLPS*FLERSR
Trigger: CCTGGATCTCTCCAGAAACCAACTTGGCAAAAATGA...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCCTAGGGCGCCCTCATaGAATGACTGCCTCGAAATC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSPRAPS*NDCLEI
Trigger: GATTTCGAGGCAGTCATTCCATGAGGGCGCCCTAGG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAGCTTCTTGGCAATCTaGAGCTGGTGGTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAESFLAI*SWWWPS
Trigger: ACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACCTTGGACAGCTTCTTaGCAATCTGGAGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLPWTAS*QSGAGG
Trigger: ACCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTTTTCTGGTCCTCGGTaGCTGTCCACAGGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEFSGPR*LSTGIS
Trigger: AGAGATCCCTGTGGACAGCCACCGAGGACCAGAAAA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTACATCACCAAGGAGTTaGCCTTGTCATCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGTSPRS*PCHPGT
Trigger: GGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTCAGTGAGTGATTCCTaGTGGATCAGGATCTGCGTG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTSVSDS*WIRICV
Trigger: CACGCAGATCCTGATCCACCAGGAATCACTCACTGA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTGGAGAAAGGCACACTaGAAGAACTTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEWRKAH*KNLLGS
Trigger: GCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTGGAGAAAGGCACACTaGAAGAACTTGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGWRKAH*KNLLGS
Trigger: GCTCCCCAGCAAGTTCTTCCAGTGTGCCTTTCTCCA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGAGAGGGTGAATTTTaGTGCCTGCAAAGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGEGEF*CLQSSL
Trigger: CAGGCTGCTTTGCAGGCACCAAAATTCACCCTCTCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCTTGTTCTGTATCTTTaGGCACTTTTACCAAGATTT +
Preference number: 4 (lower is better)
Translates to: GFPTRRPSRTQRHLILACLVLYL*ALLPRF
Trigger: AAATCTTGGTAAAAGTGCCCAAAGATACAGAACAAG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGCATTTATTATATCTTaGAGAACATTCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGENSICLLGPWRTRGRWAFIIS*RTFQSS
Trigger: GCTGGACTGGAATGTTCTCCAAGATATAATAAATGC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGACAGAGATAAGAGGTTaGGGCACAGAAATAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVTEIRG*GTEIRD
Trigger: ATCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGT...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGAGGAGGAATGGAGAGTaGAAGGTTGCCTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQARRNGE*KVAYSE
Trigger: TTCACTGTAGGCAACCTTCCACTCTCCATTCCTCCT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATGGGATGAGTTGCACTaGGAACAGAGACTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLWDELH*EQRLGR
Trigger: CCTCCCTAGTCTCTGTTCCCAGTGCAACTCATCCCA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAGGCATTCCTTGGCCTaGTGGCCAGATTTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSRHSLA*WPDFWH
Trigger: GTGCCAGAAATCTGGCCACCAGGCCAAGGAATGCCT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGGCTGCCAGGTGAGTTaGACAGTCCGATTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSGCQVS*TVRFPV
Trigger: CACTGGAAATCGGACTGTCCAACTCACCTGGCAGCC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTGTCTGTGAAGCTTTaGGGCAGTACAGCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLSVKL*GSTAQV
Trigger: TACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGCAGGGAGATGGGGGTaGGGCCGTTTTATAGGATTT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEAGRWG*GRFIGF
Trigger: AAATCCTATAAAACGGCCCCACCCCCATCTCCCTGC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp CCGGCTGCCCTGCTATCTCACTTGTTTGTGTGCTTATaGTCAACTCTACCTATGAGGAGTGAGCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PAALLSHLFVCL*STLPMRSELLK
Trigger: TTTTAGGAGCTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAGGGCAGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp TTGGAAGTTCTTGTGTGCTGGAGATGTGGCTGGGGTTaGTCTCACAGTGGAGGCAAGGAATTGCAACTTTTT +
Preference number: 4 (lower is better)
Translates to: LEVLVCWRCGWG*SHSGGKELQLF
Trigger: AAAAAGTTGCAATTCCTTGCCTCCACTGTGAGACAAACCCCAGCCACATCTCCAGCACACAAGAACTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp TCAGGTGTGGTATCAGGAATAATGTGGGAGGCTGGATaGAAGTCGGTGCCAGGAAAAATGGTAATTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SGVVSGIMWEAG*KSVPGKMVIVG
Trigger: TCCCACAATTACCATTTTTCCTGGCACCGACTTCAATCCAGCCTCCCACATTATTCCTGATACCACACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp ATGTGCTCCTTGACGTCAAGGGACCACACCAGAATGTaGTCCGACTTCAGGTCACAGAAGATGATGTTTTTC +
Preference number: 4 (lower is better)
Translates to: MCSLTSRDHTRM*SDFRSQKMMFF
Trigger: GAAAAACATCATCTTCTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTCCCTTGACGTCAAGGAGCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
3UTR CAA 72 bp TGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATaGACACGTTCTGGTGGGTTGTTTATGGATTTCTGC +
Preference number: 4 (lower is better)
Translates to: WGSPMGLGKLHG*TRSGGLFMDFC
Trigger: GCAGAAATCCATAAACAACCCACCAGAACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR TCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAAAGGAGAAAGAGGTTaGGGGATAGTGAGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTKGERG*GIVREV
Trigger: AACCTCCCTCACTATCCCTCAACCTCTTTCTCCTTT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCCTGTTGTGGGGTTTaGGGGCCGGAATTTAATTTT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASCCGV*GPEFNF
Trigger: AAAATTAAATTCCGGCCCTCAAACCCCACAACAGGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGAACGCTTGGCTGATTTaGCTAATAAAGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTNAWLI*LIKAGL
Trigger: CAGACCAGCCTTTATTAGTCAAATCAGCCAAGCGTT...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR TCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAGGAGATATCAGCTGTaGTGGCTTGGAGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTRRYQL*WLGETV
Trigger: CACTGTTTCTCCAAGCCATCACAGCTGATATCTCCT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATAGACTCAAGCAATTCCTaGACAACTGCCGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: YQHYALGLLNLQTCKPNIDSSNS*TTAVCP
Trigger: TGGACACACGGCAGTTGTGCAGGAATTGCTTGAGTC...TATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTTCTCAGCAGATGTTTaGTGGGGTCAGGACTATCCA +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTFSADV*WGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCAGGTAAGACAGCATTaGTTTGGGGCCTTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAQVRQH*FGAFFL
Trigger: CAAAAAGAAGGCCCCAAAGCAATGCTGTCTTACCTG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCATCTTCATCAGCTTaGACTTTTCCGCTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASSSSA*TFPLSA
Trigger: TGCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGCATCCTGAGGTCTTCTaGTCTGATCACCCCATTCTT +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLHPEVF*SDHPIL
Trigger: AAGAATGGGGTGATCAGAGCAGAAGACCTCAGGATG...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACGTGCTATAAACCTTTaGCAGAAGCCAACGGGAACG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLRAINL*QKPTGT
Trigger: CGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGCTGATCAGCATCCGTaGTATAAACCTTTGCCAGAA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAADQHP*YKPLPE
Trigger: TTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGCCTGTGCTCCAGCTaGGTCCAAATTTACTTGACA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGLCSS*VQIYLT
Trigger: TGTCAAGTAAATTTGGACGCAGCTGGAGCACAGGCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTGGAGACTGTTTCCCTaGTGTTGGGTGAGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSWRLFP*CWVRSS
Trigger: GCTTGACCTCACCCAACAGCAGGGAAACAGTCTCCA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCTGGTTACCACCCTCTaGCAACATGAGGGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLVTTL*QHEGGK
Trigger: CTTACCACCCTCATGTTGGCAGAGGGTGGTAACCAG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGATAGAGGTTGGGGTTaGTTCCTGTTTGGGGCCATA +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLDRGWG*FLFGAI
Trigger: TATGGCCCCAAACAGGAAGCAACCCCAACCTCTATC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGGCACTGTTGCATGTaGAGGAATTTTATGACCTCC +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAWHCCM*RNFMTS
Trigger: GGAGGTCATAAAATTCCTGCACATGCAACAGTGCCA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAGAGGATGGCACTGTTaGATGTGCAGGAATTTTATG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYRGWHC*MCRNFM
Trigger: CATAAAATTCCTGCACATGCAACAGTGCCATCCTCT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTCAGCAGATGTTTGCTaGGGTCAGGACTATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSTMLLDFSISRPVSQIYSADVC*GQDYPA
Trigger: TGCTGGATAGTCCTGACCCCAGCAAACATCTGCTGA...ATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTTCCCGGATAACTGCTaGGCAAGGGACTGGCTTCAA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEFPDNC*ARDWLQ
Trigger: TTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGGCGATCTCAAACTTaGCCAGGAACTGGAAGTACT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGRSQT*PGTGST
Trigger: AGTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCCACCGTGTAGTTCCTaGACTCCTCTTTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSPPCSS*TPLFHP
Trigger: GGGATGGAAAAGAGGAGTCCAGGAACTACACGGTGG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCACACAGCTGGTAGGTaGTGGAGTGGTACATCACCA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEHTAGR*WSGTSP
Trigger: TGGTGATGTACCACTCCACCACCTACCAGCTGTGTG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTACCACTGTCTTCCCTaGGGCTGTAAAATCAGCAGT +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTYHCLP*GCKISS
Trigger: ACTGCTGATTTTACAGCCCCAGGGAAGACAGTGGTA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGTGGATCTTTCTCATaGACCAAAGAGCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGGSFS*TKEQED
Trigger: GTCCTCCTGCTCTTTGGTCCATGAGAAAGATCCACC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTACAGAGATAAGAGGTTaGGGCACAGAAATAAGGGAT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCTEIRG*GTEIRD
Trigger: ATCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCATTCCTTGGCCTGGTaGCCAGATTTCTGGCACTTG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEHSLAW*PDFWHL
Trigger: CAAGTGCCAGAAATCTGGCCACCAGGCCAAGGAATG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTTTCAAAGCATGCTGTaGGATGGGATATTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYFQSML*DGILVL
Trigger: CAACACCAATATCCCATCCCACAGCATGCTTTGAAA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGAAATGTGGGGAAATaGGGTGAACGTCAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGNVGK*GERQVD
Trigger: ATCCACCTGACGTTCACCCCATTTCCCCACATTTCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTACTTCAGGCCATCTaGGCTTATATATGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALLQAI*AYICVQ
Trigger: CTGCACGCATATATAAGCCCAGATGGCCTGAAGTAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTCTTCATTCCCTGACTTaGTGGCCGCATACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: YALGLLNLQTCKPNIFLFLHSLT*WPHTGA
Trigger: TGCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAG...AAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp TTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGTCTAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LRVGCYKSEFFPLSVCWSRDWLQ*STFSAD
Trigger: ATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCT...AGACCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGAAGCTGTCAGTTTTTaGAGTTTTGAGAGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTEAVSF*SFERCK
Trigger: CTTGCACCTCTCAAAACTTCAAAAACTGACAGCTTC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTCAGGTCACAGAAGATaGTGTTTTTCTTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQASGHRR*CFSCAG
Trigger: ACCTGCACAAGAAAAACATCATCTTCTGTGACCTGA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGCAGTAGTCAGTGAGTaGTTCCTGGTGGATCAGGAT +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEAVVSE*FLVDQD
Trigger: ATCCTGATCCACCAGGAATCACTCACTGACTACTGC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTAAATCCCATACAATGTaGTTTCACAACCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCKSHTM*FHNQKP
Trigger: AGGCTTCTGGTTGTGAAATCACATTGTATGGGATTT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGAGAAGGGAGAAATTaGAGTGTGGCGCCAAGATTG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLREGRN*SVAPRL
Trigger: CAATCTTGGCGCCACACTTCAATTTCTCCCTTCTCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCCTCTGAAACCTGGGTaGATAATCAGAGAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEPLKPG*IIREVS
Trigger: GGACACCTCTCTGATTATTCACCCAGGTTTCAGAGG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGAGAGTATATGGGTTTaGCACCATGGGGTGGATAGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEESIWV*HHGVDR
Trigger: CCTATCCACCCCATGGTGTCAAACCCATATACTCTC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGAAGAGAGGCTGGGATaGAGGGTGCAAAGGAATAGT +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEEERLG*RVQRNS
Trigger: ACTATTCCTTTGCACCCTTCATCCCAGCCTCTCTTC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGACGATGGAAAGGAAATaGGAGGTTCTAAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAETMERK*EVLRGG
Trigger: CCCGCCTCTTAGAACCTCTCATTTCCTTTCCATCGT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTAGGAGATATCAGCTGTaGTGGCTTGGAGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRRYQL*WLGETV
Trigger: CACTGTTTCTCCAAGCCATCACAGCTGATATCTCCT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCTTTTTGAGCCAGGATaGGCCAGGAAAAGGACTTTC +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSELFEPG*ARKRTF
Trigger: GAAAGTCCTTTTCCTGGCTCATCCTGGCTCAAAAAG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTCATAGGCTGCCGGGATaGTCAGAAGCTGGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: YALGLLNLQTCKPNIFLFHRLPG*SEAGPF
Trigger: AAAAGGGCCAGCTTCTGAGCATCCCGGCAGCCTATG...AAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTATATTAAAGATCCTCTaGAGACATTCGGAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCILKIL*RHSESQ
Trigger: TTGGCTCTCCGAATGTCTGCAGAGGATCTTTAATAT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTGTTTAAGAAGGAGATaGTGGCTGGTTACCACCCTC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGCLRRR*WLVTTL
Trigger: GAGGGTGGTAACCAGCCAGCATCTCCTTCTTAAACA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGATCAAGGAATTGACGTaGTCCGTGATGAAAGCCATG +
Preference number: 4 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLIKELT*SVMKAM
Trigger: CATGGCTTTCATCACGGACCACGTCAATTCCTTGAT...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTGTCTTCTAGGTCCTTaGAGAACTAGAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSCLLGP*RTRGRW
Trigger: CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTAACATTTTACTGTTGTaGAGACTGTTTCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCNILLL*RLFPCC
Trigger: ACAGCAGGGAAACAGTCTCCACAACAGTAAAATGTT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCCTCATGATAGAGGTTaGGGTTGCTTCCTGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEPHDRG*GCFLFG
Trigger: CCCAAACAGGAAGCAACCCCAACCTCTATCATGAGG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAATAATGTGGGAGGCTaGATTGAAGTCGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAENNVGG*IEVGAR
Trigger: CCTGGCACCGACTTCAATCCAGCCTCCCACATTATT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGGAAGAAGGAAATGTaGGGAAATGGGGTGAACGTC +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGKKEM*GNGVNV
Trigger: GACGTTCACCCCATTTCCCCACATTTCCTTCTTCCC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGTTATTGGTGATGACCTaGATACGGTTTTGTATGAAT +
Preference number: 4 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQLLVMT*IRFCMN
Trigger: ATTCATACAAAACCGTATCCAGGTCATCACCAATAA...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CCA 90 bp ACTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTATTGACACGTTCTGGTaGGTTGTTTATGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: TWTWGSPMGLGKLHGLTRIDTFW*VVYGFL
Trigger: CAGAAATCCATAAACAACCCACCAGAACGTGTCAAT...ACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCTTCACAGAGGAGACTaGCATAATCCCATGCGGAGT +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAELHRGD*HNPMRS
Trigger: ACTCCGCATGGGATTATGCCAGTCTCCTCTGTGAAG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
3UTR CAA 72 bp TTGAAAGTGCTGTTTTCCGGCTATTTGGAACTACTGTaGAGTTTGTATTGGGGTCAAGCGGCATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKVLFSGYLELL*SLYWGQAALQK
Trigger: CTTCTGCAATGCCGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCACTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AATAAGAGGTATTTTAGTTATCTGACTCGGGGCATGTaGAGTAAAGTCAATTTGCCAGTCCTGGGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NKRYFSYLTRGM*SKVNLPVLGGG
Trigger: GCCTCCACCCAGGACTGGCAAATTGACTTTACTCAACATGCCCCGAGTCAGATAACTAAAATACCTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTTCCACATCCTTCAGGTaGTTTTTCCAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGSTSFR*FFQKTA
Trigger: GGCTGTCTTTTGGAAAAATCACCTGAAGGATGTGGA...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGCGTCCAAATTTACTTaGCAAAGCTATAAACACAAG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYASKFT*QSYKHK
Trigger: CTTGTGTTTATAGCTTTGTCAAGTAAATTTGGACGC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCATGAGGGTGGTAAGTaGCATCTATCTGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSHEGGK*HLSEMP
Trigger: AGGCATCTCAGATAGATGTCACTTACCACCCTCATG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCTCCATTCAGCAAAGTaGGTTGTAAAGTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALHSAK*VVKLTE
Trigger: TTCAGTCAACTTTACAACTCACTTTGCTGAATGGAG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGCAGGATGGAAAAATTaGAAGTGCTGTTTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEAGWKN*KCCFPA
Trigger: AGCCGGAAAACAGCACTTTCAATTTTTCCATCCTGC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAAATTTGGGCTTGACTaGTGTAATGGGGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSKFGLD*CNGGCL
Trigger: CAGACAGCCCCCATTACATCAGTCAAGCCCAAATTT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTAACGCTTGGCTGATTTaGCTAATAAAGGCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGNAWLI*LIKAGL
Trigger: CAGACCAGCCTTTATTAGTCAAATCAGCCAAGCGTT...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAGAGCAGGGCACGTATaGGTAGTTGAGAATGGTGAA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAERAGHV*VVENGE
Trigger: TTCACCATTCTCAACTACTCATACGTGCCCTGCTCT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTCTTCATATCACTGCATaGAGGCCCTCACCAGATACC +
Preference number: 4 (lower is better)
Translates to: TMLLDFSISRPVSQIYFCLHITA*RPSPDT
Trigger: GGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAG...ACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR GCA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGTTCTTTTTGGATTTCTaGAGGCACATTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTFFLDF*RHIADG
Trigger: ACCATCAGCAATGTGCCTGCAGAAATCCAAAAAGAA...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTTTCATTTTCAAAGGTaGACACAACAGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYFHFQR*TQQCPL
Trigger: CAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCACTGTGCTGCAAGCTaGTTTCAAACAAATGCATTT +
Preference number: 4 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAHCAAS*FQTNAF
Trigger: AAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAAAGTGTCTCAGGGTTaGTGCCAAACGAGGCATGAA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEKVSQG*CQTRHE
Trigger: TTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGGCTTTAAAAGGCCATaGTGTAGCAGGAGAGTGATA +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLGFKRP*CSRRVI
Trigger: TATCACTCTCCTGCTACAGCATGGCCTTTTAAAGCC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCAAGACAGCATTGCTTTaGGGCCTTCTTTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: RAINLCQKPTGTKLILNTKTALL*GLLFGF
Trigger: AAATCCAAAAAGAAGGCCCCAAAGCAATGCTGTCTT...GGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CCA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTCCATAAATCCCCTGTaGACAACGTTCCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: DYYVQTNRACAPAASKFTSINPL*TTFLFV
Trigger: TACGAAAAGGAACGTTGTCCACAGGGGATTTATGGA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGACCAAATACTTAAGTaGAACTGCTGGGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSDQILK*NCWVRG
Trigger: CCCTCTGACCCAGCAGTTCCACTTAAGTATTTGGTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTTAAGAGAAAATTGCTaGGCAGGTAGGGGAGGGCTA +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLRENC*AGRGGL
Trigger: TAGCCCTCCCCTACCTGCCCAGCAATTTTCTCTTAA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp TTGGAGAAGAGAGTAAAAAGAGGCTGCTTACTGGATTaGAAATTGGTGAGATGTTTCTTGGGCTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: LEKRVKRGCLLD*KLVRCFLGWLV
Trigger: GACCAACCAGCCCAAGAAACATCTCACCAATTTCAAATCCAGTAAGCAGCCTCTTTTTACTCTCTTCTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp ATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTAACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MLLDFSISRPVSQIYFCLTRSHG*AESFLA
Trigger: AGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGT...TAAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACAGTTTTTGAAGTTTTaGGAGGTGCAAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLQFLKF*EVQESR
Trigger: CCTGGATTCTTGCACCTCTCAAAACTTCAAAAACTG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTACTTCAGCTGGAGTATaGTCTCTCTTTCAAACTCCC +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSTSAGV*SLFQTP
Trigger: GGGAGTTTGAAAGAGAGATCATACTCCAGCTGAAGT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGATGACTCAGGACATCTaGTTAGAGAGTGCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEMTQDI*LESAKG
Trigger: TCCTTTGGCACTCTCTAATCAGATGTCCTGAGTCAT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTGACCTTCCAGGCTCTTaGAGGAAATCTCATGTAAGT +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSDLPGS*RKSHVS
Trigger: ACTTACATGAGATTTCCTGCAAGAGCCTGGAAGGTC...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR GCA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCCATATTCTAAGAGATaGTATAGTGAACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYPYSKR*YSEHPC
Trigger: ACAAGGATGTTCACTATAGCATCTCTTAGAATATGG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGAGGATGGCACTGTTaGATGTGCAGGAATTTTATG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLRGWHC*MCRNFM
Trigger: CATAAAATTCCTGCACATGCAACAGTGCCATCCTCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGGCTGGGATGAAGGGTaGAAAGGAATAGTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGGWDEG*KGIVKK
Trigger: TTTCTTTACTATTCCTTTGCACCCTTCATCCCAGCC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGTCCATAAATCCCCTGTaGACAACGTTCCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSESINPL*TTFLFV
Trigger: TACGAAAAGGAACGTTGTCCACAGGGGATTTATGGA...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCAGAGATATAAGAGGTaGGGGCATGGAAATAAGGGA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEQRYKR*GHGNKG
Trigger: TCCCTTATTTCCATGCCCCCACCTCTTATATCTCTG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTTACTTCAGGCCATCTaGGCTTATATATGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAELLQAI*AYICVQ
Trigger: CTGCACGCATATATAAGCCCAGATGGCCTGAAGTAA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR GCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATTCTTTTTGGATTTCTaGAGGCACATTGCTGATGGT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLFFLDF*RHIADG
Trigger: ACCATCAGCAATGTGCCTGCAGAAATCCAAAAAGAA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAAACGAGGCATGAACTaGGCTGGGTTTTTATATTTG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEKRGMN*AGFLYL
Trigger: CAAATATAAAAACCCAGCCCAGTTCATGCCTCGTTT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGCCTAAACGCTATCTaGTTTGGGATAAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLSLNAI*FGIKKK
Trigger: CTTTTTCTTTATCCCAAATCAGATAGCGTTTAGGCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR TCA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTAAAAGGTCTAAGAATTaGGATGACTCAGGACATCTG +
Preference number: 4 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSKRSKN*DDSGHL
Trigger: CAGATGTCCTGAGTCATCTCAATTCTTAGACCTTTT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTCAACAAACTTCAGCTaGAGTATGATCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAESTNFS*SMISLS
Trigger: TGAAAGAGAGATCATACTCCAGCTGAAGTTTGTTGA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGCATTTATTATATCTTaGAGAACATTCCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEAFIIS*RTFQSS
Trigger: GCTGGACTGGAATGTTCTCCAAGATATAATAAATGC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACCGTTTTATAAGATTTaGGTAGGTAAAGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLPFYKI*VGKGKR
Trigger: CCTTTTTCCTTTACCTACCCAAATCTTATAAAACGG...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCCGTTTTATAAGATTTaGGTAGGTAAAGGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEPFYKI*VGKGKR
Trigger: CCTTTTTCCTTTACCTACCCAAATCTTATAAAACGG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CCA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATTATTGGTGATGACCTaGATACGGTTTTGTATGAAT +
Preference number: 4 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLLVMT*IRFCMN
Trigger: ATTCATACAAAACCGTATCCAGGTCATCACCAATAA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp AAGAGATGCTATAGTGAACATCCTTGTTCTGTATCTTaGGGCACTTTTACCAAGATTTCAGGACCAAATACT +
Preference number: 4 (lower is better)
Translates to: KRCYSEHPCSVS*GTFTKISGPNT
Trigger: AGTATTTGGTCCTGAAATCTTGGTAAAAGTGCCCAAAGATACAGAACAAGGATGTTCACTATAGCATCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
3UTR CAA 72 bp TATCTGATTTGGGATAAAGAAAAAGGAGCATTAACCTaGACTATGCCTTTAGCTCCAGCCACCTTTTTAAGA +
Preference number: 4 (lower is better)
Translates to: YLIWDKEKGALT*TMPLAPATFLR
Trigger: TCTTAAAAAGGTGGCTGGAGCTAAAGGCATAGTCAAGGTTAATGCTCCTTTTTCTTTATCCCAAATCAGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS GCA 90 bp CCGCCTGTACGCGGCGCGGATGCCTTCCGTCCTGCGGGACCGCGCTaGAGGGTCACCGCCCCGCGTGGACGGCTTGCCGCCCGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: PPVRGADAFRPAGPR*RVTAPRGRLAARVP
Trigger: GGGGACACGGGCGGCAAGCCGTCCACGCGGGGCGGTGACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACAGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
CDS TCA 90 bp AGGCGTGGACTCGTAGCCATGGCTGAGCAGAAAGCTTTCTTGCTCTaGGGCGGCGGCGGGGCCGGGTGCGGGCGCTCCGGGACGCGGGGC +
Preference number: 5 (lower is better)
Translates to: RRGLVAMAEQKAFLL*GGGGAGCGRSGTRG
Trigger: GCCCCGCGTCCCGGAGCGCCCGCACCCGGCCCCGCCGCCGCCTCAGAGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGTCCACGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGCCCCCTCAGGCACCTTaGGGTTGGCCGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRPPQAP*GWPCGW
Trigger: CCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGG...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTACGGCGTTTGGGGCCTaGGCCTCGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: AACPSGTARRRPGCGAAATAFGA*ASMLSS
Trigger: GCTGCTCAACATCGAGGCCAAGGCCCCAAACGCCGT...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGTCGCCGGAACTGCACTTCCTCCGGCTGCCCCAGAACCGGGCGGATGCCCTTGACGGCGTTTGGGGCCTaGGCCTCGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SRRNCTSSGCPRTGRMPLTAFGA*ASMLSS
Trigger: GCTGCTCAACATCGAGGCCAAGGCCCCAAACGCCGT...CAAGGGCATCCGCCCGGTTCTGGGGCAGCCGGAGGAAGTGCAGTTCCGGCGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCCCAGCACCACGGCGTTaGGGGCCTTGGCCTCGATGT +
Preference number: 5 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSPAPRR*GPWPRC
Trigger: ACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTGG...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTTGATGTGGAAGCGCTaGACGGCCACAGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGLMWKR*TATGWP
Trigger: GGGCCAGCCTGTGGCCGTCAAGCGCTTCCACATCAA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 5 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCACCCCCTCAGGCACCTTaGGGTTGGCCGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSPPQAP*GWPCGW
Trigger: CCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGG...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS TCA 90 bp CCGCTGGCTGTGGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCTCTGAGGCGGCGGCGGGGCCGGGTG +
Preference number: 5 (lower is better)
Translates to: PLAVGCIKAWTRSHG*AESFLALRRRRGRV
Trigger: CACCCGGCCCCGCCGCCGCCTCAGAGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTCCAGGAGGGTGGACTaGCCCTGGCGCGGGGGACCC +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHSRRVD*PWRGGP
Trigger: GGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGGA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCTGATCACCCCATTCTaGGCCACTGACCGAGAGCCC +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGLITPF*ATDREP
Trigger: GGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGACCTCAGAGCCGCTGTaGACCACCTCCATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGTSEPL*TTSMAF
Trigger: GAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATGAAATTCCAGCACACTaGCTGCCTCAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHEIPAH*LPQSRS
Trigger: GCTCCGGGACTGAGGCAGCAAGTGTGCTGGAATTTC...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: DADERHDAGVLQRVQHAGTTYRA*SVKKHW
Trigger: CCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGT...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTGAGCGGCGCGAGCTCCAGGGCGAAGCAGAGCGGGTGGATGCTGATGCCGATACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: AERRELQGEAERVDADADTTYRA*SVKKHW
Trigger: CCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGT...ATCGGCATCAGCATCCACCCGCTCTGCTTCGCCCTGGAGCTCGCGCCGCTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTCGGACAGCACGGTGTaGAGGCTGCTGAGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHSDSTV*RLLSGA
Trigger: CGCGCCGCTCAGCAGCCTCAACACCGTGCTGTCCGA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTGCCTGTCCGTCAGGTACTGCACGTCGTCGTCCCGGCTGCGGCGCTGCTGCTCTGAACTTGGACCTGTaGGCTGTGTGTGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: AACPSGTARRRPGCGAAALNLDL*AVCEHR
Trigger: CCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAG...AGCAGCAGCGCCGCAGCCGGGACGACGACGTGCAGTACCTGACGGACAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LGTQMRSLTARIFTACRCSGTFG*AVWLAA
Trigger: GGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGA...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS CCA 90 bp AGCTCCCACTTGGTGGTCCTGATGGTGGCCTCTCCATGCACCACCTaGGGGGCCCTCCCCGTCTGTAAGATCTCCAGGAGGGTGGACTTG +
Preference number: 5 (lower is better)
Translates to: SSHLVVLMVASPCTT*GALPVCKISRRVDL
Trigger: CAAGTCCACCCTCCTGGAGATCTTACAGACGGGGAGGGCCCCCCAGGTGGTGCATGGAGAGGCCACCATCAGGACCACCAAGTGGGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS-3UTR CAA 90 bp CCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCGGGCGTGCCAGCCATCAACCCTaGCAGCAGCCGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: PVHGGQVMLRPVGGSTGRASHQP*QQPIFK
Trigger: TTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGGC...ACGCCCGGTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAAGGGTCGCCAGGCAGTaGGCAGAAAGGTCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPARVARQ*AERSSS
Trigger: GGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCCT...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCCTGCAGGTGCTGGCTGAAGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGCAGGTCCACTTCTCTaGAGGTGGAAGTGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: ACRCWLKVSPSMGVRSCSAGPLL*RWKCRQ
Trigger: CTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTGC...TGAGCATGACCTGACCCCCATGGACGGGGAGACCTTCAGCCAGCACCTGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTTCCAGGAGGGTGGACTaGCCCTGGCGCGGGGGACCC +
Preference number: 5 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSSRRVD*PWRGGP
Trigger: GGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGGA...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCCAGCACCACGGCGTTaGGGGCCTTGGCCTCGATGT +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHPAPRR*GPWPRC
Trigger: ACATCGAGGCCAAGGCCCCAAACGCCGTGGTGCTGG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCTTGATGTGGAAGCGCTaGACGGCCACAGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSLMWKR*TATGWP
Trigger: GGGCCAGCCTGTGGCCGTCAAGCGCTTCCACATCAA...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCACCTCAGAGCCGCTGTaGACCACCTCCATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPTSEPL*TTSMAF
Trigger: GAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGT...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATATCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AMTRPRWAPESFSRPMTISGTFG*AVWLAA
Trigger: GGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGA...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS TCA 90 bp GGTTGTCATCCGTGGGCTCGGTGGGCAGCTCCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCTCCAGATCCCCATAGGCTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: GCHPWARWAAPPVSC*VGSGPSPDPHRLPG
Trigger: TCCCGGCAGCCTATGGGGATCTGGAGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATGACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CCA 90 bp CTGGACACACAGCTGACTCCTCCGGCCCCACACACCAGTACATGCTaGGGGGTCTTTGCGACATGCCAGCCATCAACCCTTGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDTQLTPPAPHTSTC*GVFATCQPSTLAAA
Trigger: GGCTGCTGCAAGGGTTGATGGCTGGCATGTCGCAAAGACCCCCCAGCATGTACTGGTGTGTGGGGCCGGAGGAGTCAGCTGTGTGTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
ENST00000534045.5
CDS CCA 90 bp TTGAACTCCACGGACTCAACCTTGGCTCTCGAGCCAGCCGGCCTCTaGAGCTCCCACTTGGTGGTCCTGATGGTGGCCTCTCCATGCACC +
Preference number: 5 (lower is better)
Translates to: LNSTDSTLALEPAGL*SSHLVVLMVASPCT
Trigger: GGTGCATGGAGAGGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGGCCGGCTGGCTCGAGAGCCAAGGTTGAGTCCGTGGAGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS CCA 90 bp AACTCCACGGACTCAACCTACTTGGCTCTCGAGCCAGCCGGCCTCTaGAGCTCCCACTTGGTGGTCCTGATGGTGGCCTCTCCATGCACC +
Preference number: 5 (lower is better)
Translates to: NSTDSTYLALEPAGL*SSHLVVLMVASPCT
Trigger: GGTGCATGGAGAGGCCACCATCAGGACCACCAAGTGGGAGCTCCAGAGGCCGGCTGGCTCGAGAGCCAAGTAGGTTGAGTCCGTGGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGTTTCTCAGCAGATGTTaGCTGGGGTCAGGACTATCC +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRFLSRC*LGSGLS
Trigger: GGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAA...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCAATGACGATAAGGGTCGCCAGGCAGTaGGCAGAAAGGTCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: AMTRPRWAPESFSRPMTIRVARQ*AERSSS
Trigger: GGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCCT...TATCGTCATTGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRLVGYF*GEHVSQ
Trigger: CTGGGACACATGCTCACCCAAAAAATAGCCTACCAG...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYTGRMP*DSFLAI
Trigger: GATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: AAPEPGGCPWTASWQSGATGRMP*DSFLAI
Trigger: GATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATACCTCAGAGCCGCTGTaGACCACCTCCATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYTSEPL*TTSMAF
Trigger: GAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GTCCCAGCACTCCATCATGAGCGCCTGCAGTCGCCGGAACTGCACTTCCTCCGGACCAAGGAGTTGGCCTaGTCATCCAGGCACCAGACG +
Preference number: 5 (lower is better)
Translates to: VPALHHERLQSPELHFLRTKELA*SSRHQT
Trigger: CGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGT...CCGGAGGAAGTGCAGTTCCGGCGACTGCAGGCGCTCATGATGGAGTGCTGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGTCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPSGTFG*AVWLAA
Trigger: GGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGA...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp AAATCCAGGTGCGTCCCGACCACCAGCACCACGGCGTTTGGGGCCTTGGCCTCGCCCATGAGGATGCACTaGGACTTGGGGATCCCCTAT +
Preference number: 5 (lower is better)
Translates to: KSRCVPTTSTTAFGALASPMRMH*DLGIPY
Trigger: ATAGGGGATCCCCAAGTCCAAGTGCATCCTCATGGG...CGAGGCCAAGGCCCCAAACGCCGTGGTGCTGGTGGTCGGGACGCACCTGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS GCA 90 bp CAGCAGCCGATCTTCAAAGGCAGGTCCCGCTGTTGTCACTGCCACTaGCGCTGGCTGTGGGGTGCATTAAGGCGTGGACTCGTAGCCATG +
Preference number: 5 (lower is better)
Translates to: QQPIFKGRSRCCHCH*RWLWGALRRGLVAM
Trigger: CATGGCTACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCTGCCTTTGAAGATCGGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS GCA 90 bp CCCTTGCAGCAGCCGATCTTCAAAGGCAGGTCCCGCTGTTGTCACTaGCACTGCCGCTGGCTGTGGGGTGCATTAAGGCGTGGACTCGTA +
Preference number: 5 (lower is better)
Translates to: PLQQPIFKGRSRCCH*HCRWLWGALRRGLV
Trigger: TACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCTGCCTTTGAAGATCGGCTGCTGCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS GCA 90 bp ATTTCTGCAGGCACATTGCTGATGGTCAGGTCTTCAGTGTCCAGCTaGCAGAGGTTGCCCAGCTGCCCCAGCTCAGGAGGGAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: ISAGTLLMVRSSVSS*QRLPSCPSSGGSSR
Trigger: CCGGGAGCTCCCTCCTGAGCTGGGGCAGCTGGGCAACCTCTGGCAGCTGGACACTGAAGACCTGACCATCAGCAATGTGCCTGCAGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000531270.5
CDS GCA 90 bp GCTTCCTTCCCGCGTCCCTGCCTGCCAGGAAGGTCCCCTGTAGCTTaGAGAGACCATGGTAGACAGAGCAGTTGTATCTGCGCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ASFPRPCLPGRSPVA*RDHGRQSSCICASQ
Trigger: CTGGCTGGCGCAGATACAACTGCTCTGTCTACCATGGTCTCTGCAAGCTACAGGGGACCTTCCTGGCAGGCAGGGACGCGGGAAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534045.5
CDS-3UTR CAA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTCTTCATTCCCTGACTaGATGGCCGCATACAGGGGC +
Preference number: 5 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSSFPD*MAAYRG
Trigger: GCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAGA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGGCCGAAGCAGGAATATaGCAATGTCTTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRAEAGI*QCLHSL
Trigger: CAGGGAATGAAGACATTGCAATATTCCTGCTTCGGC...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCGCAGGTCCACTTCTCTaGAGGTGGAAGTGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLAGPLL*RWKCRQ
Trigger: CTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTGC...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGGCCTTGGCCTCGATGTaGAGCAGCCAGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQALASM*SSQNWR
Trigger: CCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGGC...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGGTCTCCCCGTCCATGGGGGTCAGGTCATGCTCAGACCTGTCGGAGGCAGCACCATAGGCACGCAGCGTaGCAATCCTTTCCACACGGA +
Preference number: 5 (lower is better)
Translates to: RSPRPWGSGHAQTCRRQHHRHAA*QSFPHG
Trigger: TCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATG...GTGCTGCCTCCGACAGGTCTGAGCATGACCTGACCCCCATGGACGGGGAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCAGGGCGATCTCAAACTaGGCCAGGAACTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSRAISN*ARNWKY
Trigger: GTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCT...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ACAGCTTCTTGGCAATCTGGAGCTGGTGGTGGCCCAGTGCAGGGCGCTGTCCTGTCGCTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: TASWQSGAGGGPVQGAVLSLCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCGA...CAGGACAGCGCCCTGCACTGGGCCACCACCAGCTCCAGATTGCCAAGAAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCTCGGACAGCACGGTGTaGAGGCTGCTGAGCGGCGCG +
Preference number: 5 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSSDSTV*RLLSGA
Trigger: CGCGCCGCTCAGCAGCCTCAACACCGTGCTGTCCGA...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCGACCACACCAGAATGTaGTCCGACTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSDHTRM*SDFRSQ
Trigger: CTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTC...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATAGGAGCAGCTGTCCTTaGGGGTGCCCCGCACCACGG +
Preference number: 5 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDRSSCP*GCPAPR
Trigger: CCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCCT...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTGGCTGAAGGTCTCCCCTCCGCGATGCTGAACTaGGACCTGTTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: VSDGEDLHGLQVLAEGLPSAMLN*DLLAVC
Trigger: ACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGA...GGGGAGACCTTCAGCCAGCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCCCCTCAGGCACCTTaGGGTTGGCCGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPPQAP*GWPCGW
Trigger: CCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACGTGCTGCCTGCCTCTTaGACAGGCTGCAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHVLPAS*TGCRGW
Trigger: CCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCAC...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATCAGTGGGGGAGCTTTTaGAGCCAGGATGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYQWGSF*SQDEPG
Trigger: TCCTGGCTCATCCTGGCTCAAAAAGCTCCCCCACTG...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCACGGAGAGAAGGGGTaGGGGTCCTTGCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHHGEKG*GSLPIP
Trigger: GGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGTG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS TCA 90 bp CCAGCTGCCCCAGCTCAGGAGGGAGCTCCCGGAGGCCAGGGTTGCTaGAGACAGATGTGTCCACCACGAGAGAATACACACACACACACA +
Preference number: 5 (lower is better)
Translates to: PAAPAQEGAPGGQGC*RQMCPPRENTHTHT
Trigger: TGTGTGTGTGTGTGTATTCTCTCGTGGTGGACACATCTGTCTTCAGCAACCCTGGCCTCCGGGAGCTCCCTCCTGAGCTGGGGCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525617.2
CDS GCA 90 bp GGACTCAAGCAATTCCTGCACAACTGCCGTGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTCATCCGTGGGCTCGGTGGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: GLKQFLHNCRVSKIR*HHGWVVIRGLGGQL
Trigger: GAGCTGCCCACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGCAGTTGTGCAGGAATTGCTTGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CCA 90 bp TTCCTGCACAACTGCCGTGTGTCCAAAATACGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTCGGTGGGCAGCTCCACCAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: FLHNCRVSKIRCHHG*VVIRGLGGQLHQSL
Trigger: AAGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGCAGTTGTGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CCA 90 bp GGGAGGGTCGCCAGGCAGTTGGCAGAAAGGTCGAGCTCCGTGATCTaGCAGGAGATGTCTATGAGCCAGTCTAGGTCTACCCAGGGCAGT +
Preference number: 5 (lower is better)
Translates to: GRVARQLAERSSSVI*QEMSMSQSRSTQGS
Trigger: ACTGCCCTGGGTAGACCTAGACTGGCTCATAGACATCTCCTGCCAGATCACGGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CCA 90 bp CAGATGATTTCGTCCGATGACTGCACGCCAGGCAGCTCCCCCAGGTaGTTGTCGGAGAGGTTCAGCTTCCGGAGATTGATGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QMISSDDCTPGSSPR*LSERFSFRRLMRPQ
Trigger: CTGGGGCCTCATCAATCTCCGGAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TGCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCATCTTCATTCCCTGACTaGATGGCCGCATACAGGGGC +
Preference number: 5 (lower is better)
Translates to: CWPPAGTRRSSSWHRWPASSFPD*MAAYRG
Trigger: GCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAGA...TGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAGCTCCCCCAGGTGGTaGTCGGAGAGGTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPSSPRW*SERFSF
Trigger: GAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCT...GGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGATCATCTTCATCAGCTaGCACTTTTCCGCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGIIFIS*HFSAFR
Trigger: GCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGAT...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGCTTTCCACACGGAACTaGGCTTCAATTAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRLSTRN*ASIKSR
Trigger: CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCGCCTGCAGATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTATGTTGATGTGCTCCTaGACGTCAAGGGACCACACC +
Preference number: 5 (lower is better)
Translates to: PPADLQGGTVDDKEARPIMLMCS*TSRDHT
Trigger: GGTGTGGTCCCTTGACGTCAAGGAGCACATCAACAT...AATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATCTGCAGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGTCAGATAGCTTGATGTaGATGTGCTCCTTGACGTCA +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRSDSLM*MCSLTS
Trigger: TGACGTCAAGGAGCACATCAACATCAAGCTATCTGA...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TTTAAGACGGCAATGACTCGGCCCCGCTGGGCGCCAGAATCCTTCTCCAGGCCACCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: FKTAMTRPRWAPESFSRPPLDSF*AIWSWW
Trigger: CCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG...TGGCCTGGAGAAGGATTCTGGCGCCCAGCGGGGCCGAGTCATTGCCGTCTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACACCAAGGAGTTGGCCTaGTCATCCAGGCACCAGACG +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHTKELA*SSRHQT
Trigger: CGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCCGGCCCTGCTTTGTTaGACCCAGCTCAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEPALLC*TQLRTG
Trigger: TCCTGTTCTGAGCTGGGTCAAACAAAGCAGGGCCGG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCAGAGACATCTGATCTaGGCTTGCCCAAGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEQRHLI*ACPSWP
Trigger: GGGCCAGCTTGGGCAAGCCAAGATCAGATGTCTCTG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAA +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEECVPLG*LAVALK
Trigger: TTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGTGTGCCTCTGGGCTaGCTGGCGGTGGCACTTAAA +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHCVPLG*LAVALK
Trigger: TTTAAGTGCCACCGCCAGCAAGCCCAGAGGCACACA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGTTCAGAGTGGCGGTTaGGGGATAGCACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYVQSGG*GIAPGD
Trigger: ATCTCCTGGTGCTATCCCCAAACCGCCACTCTGAAC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS TCA 90 bp AGATCTCCAGGAGGGTGGACTTGCCCTGGCGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGCACTTTTCCGCTTTCCGCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RSPGGWTCPGAGDPR*SSSSACTFPLSAAE
Trigger: CTCAGCTGCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGGAGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CCA 90 bp TTCAAAGGCAGGTCCCGCTGTTGTCACTGCCACTGCCGCTGGCTGTaGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCTGAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: FKGRSRCCHCHCRWL*GALRRGLVAMAEQK
Trigger: TTTCTGCTCAGCCATGGCTACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCTGCCTTTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS-3UTR CAA 90 bp GATCTCCAGGGAGGCACAGTCGATGACAAGGAGGCCCGGCCCATTGCTGTACCAGCCAGCCATCAACCCTaGCAGCAGCCGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: DLQGGTVDDKEARPIAVPASHQP*QQPIFK
Trigger: TTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGGC...TGGTACAGCAATGGGCCGGGCCTCCTTGTCATCGACTGTGCCTCCCTGGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGCGATGGAGTCCCCCTCAGGCACCTTTGGGTTGGCCGTGTGGCTGGCTGCCGGAGGTGGGACAACTTGTaGCTGGAAATGTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: RDGVPLRHLWVGRVAGCRRWDNL*LEMSIS
Trigger: TGAAATTGACATTTCCAGCAACAAGTTGTCCCACCT...CCGGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGGACTCCATCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCTGGAGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCTTCATTTTTGCCAAGTaGGTTTCTGGAGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: PGAGGGAAECQHIGTQRCFIFAK*VSGEIQ
Trigger: CTGGATCTCTCCAGAAACCAACTTGGCAAAAATGAA...GCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGGAAATTCCAGCACACTaGCTGCCTCAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: QELEVLLFRLLREASPHQEIPAH*LPQSRS
Trigger: GCTCCGGGACTGAGGCAGCAAGTGTGCTGGAATTTC...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGATGGCCTTGGCCTCGATGTaGAGCAGCCAGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: IRICVPSSSLYMMLTSAMALASM*SSQNWR
Trigger: CCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGGC...CATCGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAACGGCGTTTGGGGCCTaGGCCTCGATGTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGTAFGA*ASMLSS
Trigger: GCTGCTCAACATCGAGGCCAAGGCCCCAAACGCCGT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGCATAGGCACGCAGCGTaGCAATCCTTTCCACACGGA +
Preference number: 5 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQHRHAA*QSFPHG
Trigger: TCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATG...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTGCCCCAGAACCGGGCGGATGCCCTTGGACAGCTTCTTGGCAATCTGGAGCTCCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAAC +
Preference number: 5 (lower is better)
Translates to: AAPEPGGCPWTASWQSGAPCYKP*PEANGN
Trigger: GTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGG...AGCTCCAGATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGTTCTGGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATTCGCTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHSLCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCGA...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGCTGAACTTGGACCTGTaGGCTGTGTGTGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELNLDL*AVCEHR
Trigger: CCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAG...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRRPGP*LYQTSE
Trigger: CTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCACATCTGATCTTGGCTaGCCCAAGCTGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSTSDLG*PKLAQA
Trigger: GGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGGGGTTAACTGGGCAGTaGTGGGGCACTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEEGLTGQ*WGTGMR
Trigger: TCTCATTCCAGTGCCCCACAACTGCCCAGTTAACCC...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCCACAGAAATAAGGGATaGGGGCGCAGAGATATGAGG +
Preference number: 5 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPHRNKG*GRRDMR
Trigger: CCTCATATCTCTGCGCCCCAATCCCTTATTTCTGTG...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCGGAAAGTTACATGGATaGACACGTTCTGGTGGGTTG +
Preference number: 5 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPGKLHG*TRSGGL
Trigger: CAACCCACCAGAACGTGTCAATCCATGTAACTTTCC...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS TCA 90 bp CCGCTGGCTGTGGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCTCTGTTGCAGGGGAAGTGTTCGTGG +
Preference number: 5 (lower is better)
Translates to: PLAVGCIKAWTRSHG*AESFLALLQGKCSW
Trigger: CCACGAACACTTCCCCTGCAACAGAGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534045.5
CDS CCA 90 bp ACACACACACACACACACACACACACACACACACACGCACACACGTaGCTCCTGTCAGCCTCTGCAGCCTGTACCCCAGACCCCACACTT +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHTHAHT*LLSASAACTPDPTL
Trigger: AAGTGTGGGGTCTGGGGTACAGGCTGCAGAGGCTGACAGGAGCCACGTGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525617.2
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACTCTTCATTCCCTGACTaGATGGCCGCATACAGGGGC +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHSSFPD*MAAYRG
Trigger: GCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAGA...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATTTCAGCTTCCGGAGATaGATGAGGCCCCAGGGGATA +
Preference number: 5 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHFSFRR*MRPQGI
Trigger: TATCCCCTGGGGCCTCATCAATCTCCGGAAGCTGAA...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGAGCTCCCCCAGGTGGTaGTCGGAGAGGTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRSSPRW*SERFSF
Trigger: GAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATACTGTGTCGAGGTGGTaGTCGTTCAGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: EWRPVALCGCQGGKPLINTVSRW*SFRQRT
Trigger: AGTCCTTTGCCTGAACGACAACCACCTCGACACAGT...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCGATGTCCCAGACGTaGAACTCCACGGACTCAACC +
Preference number: 5 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLPMSQT*NSTDST
Trigger: GGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGG...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCTGATCACCCCATTCTaGGCCACTGACCGAGAGCCC +
Preference number: 5 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGLITPF*ATDREP
Trigger: GGGCTCTCGGTCAGTGGCCAAGAATGGGGTGATCAG...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACATGTTGATGTGCTCCTaGACGTCAAGGGACCACACC +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHMLMCS*TSRDHT
Trigger: GGTGTGGTCCCTTGACGTCAAGGAGCACATCAACAT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GGAGCAGCTGTCCTTTGGGGTGCCCCGCACCACGGGAAACACAGCCACAAGCCCTCAGATAGCTTGATGTaGATGTGCTCCTTGACGTCA +
Preference number: 5 (lower is better)
Translates to: GAAVLWGAPHHGKHSHKPSDSLM*MCSLTS
Trigger: TGACGTCAAGGAGCACATCAACATCAAGCTATCTGA...GGGCTTGTGGCTGTGTTTCCCGTGGTGCGGGGCACCCCAAAGGACAGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCATCCGCGATGCTGAACTaGGACCTGTTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: KVHTTVSFATTAASTSTPSAMLN*DLLAVC
Trigger: ACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGA...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCCAGGGGTATAAAGGAAGAATCTCTGGCGTTCTCGGACAGCACGGTGTTGAGGACCTCAGAGCCGCTGTaGACCACCTCCATGGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRGIKEESLAFSDSTVLRTSEPL*TTSMAF
Trigger: GAAGGCCATGGAGGTGGTCAACAGCGGCTCTGAGGT...CCTCAACACCGTGCTGTCCGAGAACGCCAGAGATTCTTCCTTTATACCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCACCAAGGAGTTGGCCTaGTCATCCAGGCACCAGACG +
Preference number: 5 (lower is better)
Translates to: VVHHQGVGLVIQAPDDLLTKELA*SSRHQT
Trigger: CGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGT...GAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWRNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCAGGCCCGGCCCTGCTTaGTTTGACCCAGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACRPGPA*FDPAQN
Trigger: GTTCTGAGCTGGGTCAAACAAAGCAGGGCCGGGCCT...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGACATCTGATCTTGGCTaGCCCAAGCTGGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPTSDLG*PKLAQA
Trigger: GGCCTGGGCCAGCTTGGGCAAGCCAAGATCAGATGT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGCATGTGCAAGGCCCTaGCACCCAGTGCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SGENSICLLGPWRTRGRWACARP*HPVPSE
Trigger: CTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCAGCGATGCTTGGGGTaGGGACTGAGGAGACAGGCG +
Preference number: 5 (lower is better)
Translates to: SGENSICLLGPWRTRGRWQRCLG*GLRRQA
Trigger: CGCCTGTCTCCTCAGTCCCAACCCCAAGCATCGCTG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGAGGATGCACTTGGACTaGGGGATCCCCTATGGGTCT +
Preference number: 5 (lower is better)
Translates to: QELEVLLFRLLREASPHQRMHLD*GIPYGS
Trigger: AGACCCATAGGGGATCCCCAAGTCCAAGTGCATCCT...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS TCA 90 bp CTGGAGAGATCCAGGGTTTTGAGCTGCCTGCAGGTCCACTTCTCTTaGGGTGGAAGTGCCGCCAGCTGGTTCCCCTGTAACCTCAAGAAC +
Preference number: 5 (lower is better)
Translates to: LERSRVLSCLQVHFS*GGSAASWFPCNLKN
Trigger: GTTCTTGAGGTTACAGGGGAACCAGCTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS GCA 90 bp TCACATCACTGCAACCATGTAGACCATGTCCCGGACAGGCCACCCTaGCCAGCATACCTTCACAGAGGAGACTGGCATAATCCCATGCGG +
Preference number: 5 (lower is better)
Translates to: SHHCNHVDHVPDRPP*PAYLHRGDWHNPMR
Trigger: CCGCATGGGATTATGCCAGTCTCCTCTGTGAAGGTATGCTGGGCAGGGTGGCCTGTCCGGGACATGGTCTACATGGTTGCAGTGATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATTTTCTCAGCAGATGTTaGCTGGGGTCAGGACTATCC +
Preference number: 5 (lower is better)
Translates to: EWRPVALCGCQGGKPLINFLSRC*LGSGLS
Trigger: GGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAA...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCCGTGAAGAAGCACTGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCGGGAGGTGGGACAACTaGTTGCTGGAAATGTCAATT +
Preference number: 5 (lower is better)
Translates to: SVKKHWLTVAMLAGPPMSGRWDN*LLEMSI
Trigger: AATTGACATTTCCAGCAACAAGTTGTCCCACCTCCC...GGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCAGTGCTTCTTCACGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGTCAGTTTTTGAAGTTTaGAGAGGTGCAAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGSVFEV*RGARIQ
Trigger: CTGGATTCTTGCACCTCTCAAAACTTCAAAAACTGA...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GATGCCGATGAGCGCCACGATGCAGGGGTGCTGCAGCGCGTGCAGCATGCTGGCTCAGTTTTTGAAGTTTaGAGAGGTGCAAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: DADERHDAGVLQRVQHAGSVFEV*RGARIQ
Trigger: CTGGATTCTTGCACCTCTCAAAACTTCAAAAACTGA...GCCAGCATGCTGCACGCGCTGCAGCACCCCTGCATCGTGGCGCTCATCGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CGTGTGCTGGGCCCAGGCTGTCTCGCAGACCGGGCAGGGCACGTACTGCTCCATTCAGTTTTTGAAGTTTaGAGAGGTGCAAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: RVLGPGCLADRAGHVLLHSVFEV*RGARIQ
Trigger: CTGGATTCTTGCACCTCTCAAAACTTCAAAAACTGA...ATGGAGCAGTACGTGCCCTGCCCGGTCTGCGAGACAGCCTGGGCCCAGCACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCGAGAGATCCAGGGTTTaGAGCTGCCTGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSERSRV*SCLQVH
Trigger: GTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCTC...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCTGGGGCAGGAGATGAAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATACTGTGTCGAGGTGGTaGTCGTTCAGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: SGAGDEVPLDGRQDTVFHTVSRW*SFRQRT
Trigger: AGTCCTTTGCCTGAACGACAACCACCTCGACACAGT...ATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTTCATCTCCTGCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTCCACGGACTCAACCTaGGCTCTCGAGCCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVSTDST*ALEPAG
Trigger: GCCGGCTGGCTCGAGAGCCAAGGTTGAGTCCGTGGA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCCGATGTCCCAGACGTaGAACTCCACGGACTCAACC +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILPMSQT*NSTDST
Trigger: GGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GAAGATTCCACACTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTATCCGATGTCCCAGACGTaGAACTCCACGGACTCAACC +
Preference number: 5 (lower is better)
Translates to: EDSTLQVHLRQADQHPCYPMSQT*NSTDST
Trigger: GGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGG...ATAGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGTGTGGAATCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS-3UTR CAA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCCCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAAC +
Preference number: 5 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPPCYKP*PEANGN
Trigger: GTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGG...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTCGCTGTGCTCCAGCTaGCTGTTCTCCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSLCSS*LFSRKS
Trigger: GCTCTTCCTGGAGAACAGCAAGCTGGAGCACAGCGA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCCCGACCTTGATGTGGAAGCGCTaGACGGCCACAGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AILSTRNLASIKSRCVPTLMWKR*TATGWP
Trigger: GGGCCAGCCTGTGGCCGTCAAGCGCTTCCACATCAA...GGTCGGGACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCATGTTGATGTGCTCCTaGACGTCAAGGGACCACACC +
Preference number: 5 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPMLMCS*TSRDHT
Trigger: GGTGTGGTCCCTTGACGTCAAGGAGCACATCAACAT...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCTGGCATTTCCCAAGCCATTCCCATGAGGATGCACTTGGACTTGGGGATCCCCCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGISQAIPMRMHLDLGIPPLDSF*AIWSWW
Trigger: CCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG...GGGGATCCCCAAGTCCAAGTGCATCCTCATGGGAATGGCTTGGGAAATGCCAGA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTCCGCGATGCTGAACTaGGACCTGTTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSSAMLN*DLLAVC
Trigger: ACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGACCAAGGAGTTGGCCTaGTCATCCAGGCACCAGACG +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPTKELA*SSRHQT
Trigger: CGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCCCCCTCAGGCACCTTaGGGTTGGCCGTGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCPPQAP*GWPCGW
Trigger: CCAGCCACACGGCCAACCCAAAGGTGCCTGAGGGGG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTCAGCCCCCTGGGACTaGGTGCCCAGGTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSAPWD*VPRLVK
Trigger: TTTTACCAACCTGGGCACCAAGTCCCAGGGGGCTGA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGGGGCGGCAAGGTGCTCAGTGGGGCCTTTTTCACTTCTTTaGTGGTGGAATGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: RGFVLWRAGVGAARCSVGPFSLL*WWNVIS
Trigger: ACTGATGACATTCCACCACAAAAGAAGTGAAAAAGG...CCCCACTGAGCACCTTGCCGCCCCCACTCCTGCCCGCCAGAGAACAAACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCAGCGATGCTTGGGGTaGGGACTGAGGAGACAGGCG +
Preference number: 5 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQQRCLG*GLRRQA
Trigger: CGCCTGTCTCCTCAGTCCCAACCCCAAGCATCGCTG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGCTGTCTGTGAAGCTTaGGGGCAGTACAGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFAVCEA*GQYSPG
Trigger: ACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAGC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATGTAAGGTCAAGTTGTTaGGACAGAAGGTCTACAGGG +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYVRSSC*DRRSTG
Trigger: CCCTGTAGACCTTCTGTCCAAACAACTTGACCTTAC...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTGTTTTCAAAAAGCTGCAGGTCCATCTCCGCCAGGCTGATCAGCATCCGTGCTACGGACTCAACCTACTaGGCTCTCGAGCCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: LFSKSCRSISARLISIRATDSTY*ALEPAG
Trigger: GCCGGCTGGCTCGAGAGCCAAGTAGGTTGAGTCCGT...AGCACGGATGCTGATCAGCCTGGCGGAGATGGACCTGCAGCTTTTTGAAAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCCCAGGGGAACTTCTTaGAGTGCGTTTTCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHPRGTS*SAFSEK
Trigger: TTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGGG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCCCAGGGGAACTTCTTaGAGTGCGTTTTCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWPRGTS*SAFSEK
Trigger: TTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGGG...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCCAGCGGTCGCTTCTCCCCAGGGGAACTTCTTaGAGTGCGTTTTCTGAGAAA +
Preference number: 5 (lower is better)
Translates to: KSRVLHLAHHRQGQRSLLPRGTS*SAFSEK
Trigger: TTTCTCAGAAAACGCACTCAAAGAAGTTCCCCTGGG...GAGAAGCGACCGCTGGCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGACATAGGCACGCAGCGTaGCAATCCTTTCCACACGGA +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGHRHAA*QSFPHG
Trigger: TCCGTGTGGAAAGGATTGCAACGCTGCGTGCCTATG...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GCTGGCCTCCTGCCGGAACTCGGAGAAGTTCTTCATGGCATCGGTGGCCCGCAGATCTCATGTAAGTGTTaGAAGGTGATGTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: AGLLPELGEVLHGIGGPQISCKC*KVMSGK
Trigger: CTTCCCAGACATCACCTTCAAACACTTACATGAGAT...CTGCGGGCCACCGATGCCATGAAGAACTTCTCCGAGTTCCGGCAGGAGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGCCGGAGGGGGAGCGGCAGAGTGCCAGCACATAGGCACGCAGCGTTGCAATCCAAGTTCTTGAATTTTTaGATGTGGAAGCGCTTGACG +
Preference number: 5 (lower is better)
Translates to: SRRGSGRVPAHRHAALQSKFLNF*MWKRLT
Trigger: CGTCAAGCGCTTCCACATCAAAAAATTCAAGAACTT...GGATTGCAACGCTGCGTGCCTATGTGCTGGCACTCTGCCGCTCCCCCTCCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHLVGYF*GEHVSQ
Trigger: CTGGGACACATGCTCACCCAAAAAATAGCCTACCAG...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CAGGAACTGGAAGTACTGCTCTTCCGTCTGCTGCGTGAAGCCAGTCCCCACCAGCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: QELEVLLFRLLREASPHQLVGYF*GEHVSQ
Trigger: CTGGGACACATGCTCACCCAAAAAATAGCCTACCAG...CTGGTGGGGACTGGCTTCACGCAGCAGACGGAAGAGCAGTACTTCCAGTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGCTGAACTTGGACCTGTaGGCTGTGTGTGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILLNLDL*AVCEHR
Trigger: CCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAG...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTCCGCGATGCTGAACTaGGACCTGTTGGCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFSAMLN*DLLAVC
Trigger: ACACACAGCCAACAGGTCCAAGTTCAGCATCGCGGA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSRRPGP*LYQTSE
Trigger: CTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCT...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCTACATCACCAAGGAGTaGGCCTTGTCATCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSYITKE*ALSSRH
Trigger: GTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTA...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATTCAGGCACCTTTGGGTaGGCCGTGTGGCTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYSGTFG*AVWLAA
Trigger: GGCAGCCAGCCACACGGCCAACCCAAAGGTGCCTGA...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGGGTTAACTGGGCAGTaGTGGGGCACTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGGLTGQ*WGTGMR
Trigger: TCTCATTCCAGTGCCCCACAACTGCCCAGTTAACCC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCGGGGATGACAAGTTTTTaGGGGCACAGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: KGAHNSVLCHHGSIHQHPGMTSF*GHSPSW
Trigger: CCAACTTGGACTGTGCCCCAAAAAACTTGTCATCCC...CGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS GCA 90 bp ATGTCAATTTCAAGTAGCCTGGAACAGATGATTTCGTCCGATGACTaGACGCCAGGCAGCTCCCCCAGGTGGTTGTCGGAGAGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: MSISSSLEQMISSDD*TPGSSPRWLSERFS
Trigger: GCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATCTGTTCCAGGCTACTTGAAATTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CTGGGGACCCAAATGAGGTCTCTGACGGCGAGGATCTTCACGGCCTGCAGGTGCTTCATTTTTGCCAAGTaGGTTTCTGGAGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: LGTQMRSLTARIFTACRCFIFAK*VSGEIQ
Trigger: CTGGATCTCTCCAGAAACCAACTTGGCAAAAATGAA...GCACCTGCAGGCCGTGAAGATCCTCGCCGTCAGAGACCTCATTTGGGTCCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCTCAGGGGCCACCTGCATGTTGGCACAGTGGGCAAGGAGGGGCTGCCCATTATAGTCCATCTTCATTTTaGCCAAGTTGGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: AQGPPACWHSGQGGAAHYSPSSF*PSWFLE
Trigger: CTCCAGAAACCAACTTGGCAAAAATGAAGATGGACT...ATAATGGGCAGCCCCTCCTTGCCCACTGTGCCAACATGCAGGTGGCCCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCACCCCAATTTCTGCAGGCACATaGCTGATGGTCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KVHTTVSFATTAASTSTPISAGT*LMVRSS
Trigger: TGAAGACCTGACCATCAGCAATGTGCCTGCAGAAAT...TGGGGTGCTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGCACCAGACGACCTCCTCCCATCATCTTCATCAGCTaGCACTTTTCCGCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: GTSPRSWPCHPGTRRPPPIIFIS*HFSAFR
Trigger: GCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGAT...GGGAGGAGGTCGTCTGGTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGCCTTGGCCTCGATGTaGAGCAGCCAGAACTGGAGG +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVALASM*SSQNWR
Trigger: CCTCCAGTTCTGGCTGCTCAACATCGAGGCCAAGGC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAGGGCGATCTCAAACTaGGCCAGGAACTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPRAISN*ARNWKY
Trigger: GTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCCGTGCTATAAACCTTaGCCAGAAGCCAACGGGAAC +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACPCYKP*PEANGN
Trigger: GTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCGACCACACCAGAATGTaGTCCGACTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACDHTRM*SDFRSQ
Trigger: CTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTC...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGACCACACCAGAATGTaGTCCGACTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILDHTRM*SDFRSQ
Trigger: CTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGGACCACACCAGAATGTaGTCCGACTTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQDHTRM*SDFRSQ
Trigger: CTGTGACCTGAAGTCGGACAACATTCTGGTGTGGTC...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGCTGAACTTGGACCTGTaGGCTGTGTGTGAGCACAGG +
Preference number: 5 (lower is better)
Translates to: SGENSICLLGPWRTRGRWLNLDL*AVCEHR
Trigger: CCTGTGCTCACACACAGCCAACAGGTCCAAGTTCAG...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp ACTTGGACTTGGGGATCCCCTATGGGTCTTGGAAAGTTACATGGATTGACACGTAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TWTWGSPMGLGKLHGLTRRRPGP*LYQTSE
Trigger: CTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCT...ACGTGTCAATCCATGTAACTTTCCAAGACCCATAGGGGATCCCCAAGTCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGTACATCACCAAGGAGTaGGCCTTGTCATCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPYITKE*ALSSRH
Trigger: GTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTA...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATACATCACCAAGGAGTaGGCCTTGTCATCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGYITKE*ALSSRH
Trigger: GTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGGACTCCTCTTTTCCATCCCAAAACACCACGGTGTACTCCTGGCCCTGGGATTACATCACCAAGGAGTaGGCCTTGTCATCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LDSSFPSQNTTVYSWPWDYITKE*ALSSRH
Trigger: GTGCCTGGATGACAAGGCCAACTCCTTGGTGATGTA...ATCCCAGGGCCAGGAGTACACCGTGGTGTTTTGGGATGGAAAAGAGGAGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CAGCTGGTAGGTGGTGGAGTGGTACATCACCAAGGAGTTGGCCTTGTCATCCAGAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QLVGGGVVHHQGVGLVIQRNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...CTGGATGACAAGGCCAACTCCTTGGTGATGTACCACTCCACCACCTACCAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCAGATGGAATCTGGCTaGCATCTGGGGGTTAACTGG +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACQMESG*HLGVNW
Trigger: CCAGTTAACCCCCAGATGCAAGCCAGATTCCATCTG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTATGGAGAGTGGAAGGTaGCCTACAGTGAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFMESGR*PTVKEA
Trigger: TGCCTCCTTCACTGTAGGCAACCTTCCACTCTCCAT...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGATGGAGAGTGGAAGGTaGCCTACAGTGAAGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILMESGR*PTVKEA
Trigger: TGCCTCCTTCACTGTAGGCAACCTTCCACTCTCCAT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGATGTGGGAGGCTGGATaGAAGTCGGTGCCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPMWEAG*KSVPGK
Trigger: TTTTCCTGGCACCGACTTCAATCCAGCCTCCCACAT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GAGTGGCGTCCCGTCGCTCTCTGTGGCTGTCAGGGCGGGAAACCACTGATCAATAGGTGGGACAACTTGTaGCTGGAAATGTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: EWRPVALCGCQGGKPLINRWDNL*LEMSIS
Trigger: TGAAATTGACATTTCCAGCAACAAGTTGTCCCACCT...ATTGATCAGTGGTTTCCCGCCCTGACAGCCACAGAGAGCGACGGGACGCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGAGTCCATCTTCATTTTaGCCAAGTTGGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQSPSSF*PSWFLE
Trigger: CTCCAGAAACCAACTTGGCAAAAATGAAGATGGACT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp TGGATCAGGATCTGCGTGCCCAGCTCCTCACTGTACATGATGCTCACGTCCGCGCTTTCCACACGGAACTaGGCTTCAATTAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: WIRICVPSSSLYMMLTSALSTRN*ASIKSR
Trigger: CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG...CGCGGACGTGAGCATCATGTACAGTGAGGAGCTGGGCACGCAGATCCTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCTGGTAGGCTATTTTTaGGGTGAGCATGTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACLVGYF*GEHVSQ
Trigger: CTGGGACACATGCTCACCCAAAAAATAGCCTACCAG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAGCAACATTTTACTGTaGTGGAGACTGTTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHSNILL*WRLFPC
Trigger: GCAGGGAAACAGTCTCCACAACAGTAAAATGTTGCT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCATGTGCAAGGCCCTaGCACCCAGTGCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTACARP*HPVPSE
Trigger: CTCTGAGGGCACTGGGTGCAAGGGCCTTGCACATGC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGCGCCCCTGCATTTATTATATCTaGGAGAACATTCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: AGPAPRRTGRKCRTPWRPCIYYI*ENIPVQ
Trigger: CTGGACTGGAATGTTCTCCAAGATATAATAAATGCA...GGGGCGCCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGCACGGAGAGAAGGGGTaGGGGTCCTTGCCCATTCCC +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAHGEKG*GSLPIP
Trigger: GGGAATGGGCAAGGACCCCAACCCCTTCTCTCCGTG...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAAAGGAGCATTAACCTaGACTATGCCTTTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHKGALT*TMPLAP
Trigger: TGGAGCTAAAGGCATAGTCAAGGTTAATGCTCCTTT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCTTCCCTCTCTCAGTCTGTTGGTCTCTTGCCCTCCACCTTCATATCACTGCATGCCAGCCATCAACCCTaGCAGCAGCCGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SSLSQSVGLLPSTFISLHASHQP*QQPIFK
Trigger: TTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGGC...ATGCAGTGATATGAAGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGCCACCACGGCTGGGTaGTCATCCGTGGGCTCGGTG +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEATTAG*SSVGSV
Trigger: CACCGAGCCCACGGATGACAACCCAGCCGTGGTGGC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CCTTCATATCACTGCATGAAGGCCCTCACCAGATACCAGCACTATGCTCTTGGATCTTCATTCCCTGACTaGATGGCCGCATACAGGGGC +
Preference number: 5 (lower is better)
Translates to: PSYHCMKALTRYQHYALGSSFPD*MAAYRG
Trigger: GCCCCTGTATGCGGCCATCAAGTCAGGGAATGAAGA...TCCAAGAGCATAGTGCTGGTATCTGGTGAGGGCCTTCATGCAGTGATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAGCCGAAGCAGGAATATaGCAATGTCTTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGAEAGI*QCLHSL
Trigger: CAGGGAATGAAGACATTGCAATATTCCTGCTTCGGC...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp ATACATGAAGGTGGCAAAAGTCGGGTCCTTCATCTGGCTCACCACCGACAGGGCGCCGAAGCAGGAATATaGCAATGTCTTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: IHEGGKSRVLHLAHHRQGAEAGI*QCLHSL
Trigger: CAGGGAATGAAGACATTGCAATATTCCTGCTTCGGC...GCCCTGTCGGTGGTGAGCCAGATGAAGGACCCGACTTTTGCCACCTTCATGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAGGGTCGCCAGGCAGTaGGCAGAAAGGTCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTRVARQ*AERSSS
Trigger: GGAGCTCGACCTTTCTGCCAACTGCCTGGCGACCCT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTGATTTCTCACTGGGGTTCAGCTTCCGGAGATaGATGAGGCCCCAGGGGATA +
Preference number: 5 (lower is better)
Translates to: RTQSSMSKYCTSSDFSLGFSFRR*MRPQGI
Trigger: TATCCCCTGGGGCCTCATCAATCTCCGGAAGCTGAA...CCCCAGTGAGAAATCAGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTGGGAGGTGGGACAACTaGTTGCTGGAAATGTCAATT +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFGRWDN*LLEMSI
Trigger: AATTGACATTTCCAGCAACAAGTTGTCCCACCTCCC...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AAATGGAGCAGGGTGCCGGTTTCTATGAGGAAGCTGATGGCTGACTGCAGGTCCATTTCTGCAGGCACATaGCTGATGGTCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KWSRVPVSMRKLMADCRSISAGT*LMVRSS
Trigger: TGAAGACCTGACCATCAGCAATGTGCCTGCAGAAAT...GGACCTGCAGTCAGCCATCAGCTTCCTCATAGAAACCGGCACCCTGCTCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTACCACGTACAGGGCCTaGTCCGTGAAGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCTTYRA*SVKKHW
Trigger: CCAGTGCTTCTTCACGGACAAGGCCCTGTACGTGGT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TCAGACCTGTCGGAGGCAGCACCGGGCGTATGTAGCATGTCTGAGTCCTCGCAGAAGTTCTTGAATTTTTaGATGTGGAAGCGCTTGACG +
Preference number: 5 (lower is better)
Translates to: SDLSEAAPGVCSMSESSQKFLNF*MWKRLT
Trigger: CGTCAAGCGCTTCCACATCAAAAAATTCAAGAACTT...CTGCGAGGACTCAGACATGCTACATACGCCCGGTGCTGCCTCCGACAGGTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCPLDSF*AIWSWW
Trigger: CCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTTGRMP*DSFLAI
Trigger: GATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000526457.3
ENST00000531270.5
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGTTTCCCCTTCCTTTaGTCGGTGGAGAGGAATGTA +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSFPFL*SVERNV
Trigger: TACATTCCTCTCCACCGACAAAAGGAAGGGGAAACT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACAAAAAGTGGCTATGTTaGCACATGTGTGTGCATATG +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHKKWLC*HMCVHM
Trigger: CATATGCACACACATGTGCAAACATAGCCACTTTTT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACTGCTATCTCACTTGTTaGTGTGCTTATTGTCAACTC +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHCYLTC*CAYCQL
Trigger: GAGTTGACAATAAGCACACAAACAAGTGAGATAGCA...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTCCAGCCGGCCCAGCTCCTCGTAGGACTGGTAGAAAATGTCGAACTCCCTGGTGCTATCTCACTTGTTaGTGTGCTTATTGTCAACTC +
Preference number: 5 (lower is better)
Translates to: PPAGPAPRRTGRKCRTPWCYLTC*CAYCQL
Trigger: GAGTTGACAATAAGCACACAAACAAGTGAGATAGCA...CCAGGGAGTTCGACATTTTCTACCAGTCCTACGAGGAGCTGGGCCGGCTGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACCCTTTTTCACTTCTTTaGTGGTGGAATGTCATCAGT +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHPFSLL*WWNVIS
Trigger: ACTGATGACATTCCACCACAAAAGAAGTGAAAAAGG...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCTTGGCCTGGTGGCCAGATTTCTGGCACTTGTAGCAAGCTCCTGGGGGAGGAGTTACTGGATTTGAAATaGGTGAGATGTTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: PWPGGQISGTCSKLLGEELLDLK*VRCFLG
Trigger: GCCCAAGAAACATCTCACCAATTTCAAATCCAGTAA...CTCCTCCCCCAGGAGCTTGCTACAAGTGCCAGAAATCTGGCCACCAGGCCAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCCACAGAGATAAGAGGTaGGGGCACAGAAATAAGGGA +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACHRDKR*GHRNKG
Trigger: TCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGTG...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACGTGCTTAAAAGAGTATaGTCTAAGTTGGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHVLKRV*SKLAPE
Trigger: CTCTGGTGCCAACTTAGACAATACTCTTTTAAGCAC...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGAAAGGAGGCTTTGGATaGGGAAGAAGGGCAGTAATG +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILKGGFG*GRRAVM
Trigger: CATTACTGCCCTTCTTCCCAATCCAAAGCCTCCTTT...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGTTCAGAGTGGCGGTTaGGGGATAGCACCAGGAGAT +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVVQSGG*GIAPGD
Trigger: ATCTCCTGGTGCTATCCCCAAACCGCCACTCTGAAC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS CCA 90 bp GATAAGCTCTTCAGTAGGCAAACCGAGGGAGGGACTGTGTCGAGGTaGTTGTCGTTCAGGCAAAGGACTTCCAAAGACTCACTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: DKLFSRQTEGGTVSR*LSFRQRTSKDSLRK
Trigger: CTTCCTAAGTGAGTCTTTGGAAGTCCTTTGCCTGAACGACAACCACCTCGACACAGTCCCTCCCTCGGTTTGCCTACTGAAGAGCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGAGAGATCCAGGGTTTaGAGCTGCCTGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTERSRV*SCLQVH
Trigger: GTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCTC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAGTCCCGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATTTGGGGCCTTCTTTTaGGATTTCTGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: KSRSMAVRTQSSMSKYCTFGAFF*DFCRHI
Trigger: AATGTGCCTGCAGAAATCCAAAAAGAAGGCCCCAAA...TGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCGGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTCTTTCCACACGGAACTaGGCTTCAATTAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFLSTRN*ASIKSR
Trigger: CCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAG...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAAGTTCTTGAATTTTTaGATGTGGAAGCGCTTGACG +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHKFLNF*MWKRLT
Trigger: CGTCAAGCGCTTCCACATCAAAAAATTCAAGAACTT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGATCAGATAGCTTGATGTaGATGTGCTCCTTGACGTCA +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGSDSLM*MCSLTS
Trigger: TGACGTCAAGGAGCACATCAACATCAAGCTATCTGA...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TGGGAGGGACTGAGCCCGTGCTGTGGTCATAAGCGCTCAAAAGACAGAGGCCACAAAAAGTGGCTATGTTaGCACATGTGTGTGCATATG +
Preference number: 5 (lower is better)
Translates to: WEGLSPCCGHKRSKDRGHKKWLC*HMCVHM
Trigger: CATATGCACACACATGTGCAAACATAGCCACTTTTT...GTGGCCTCTGTCTTTTGAGCGCTTATGACCACAGCACGGGCTCAGTCCCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GAAAATTGCTGGGCAGGTAGGGGAGGGCTAGTCACGGAAGGAAACTGTAAGCCGAAGAGAAGGGAGAAATaGAAGTGTGGCGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: ENCWAGRGGLVTEGNCKPKRREK*KCGAKI
Trigger: AATCTTGGCGCCACACTTCAATTTCTCCCTTCTCTT...CGGCTTACAGTTTCCTTCCGTGACTAGCCCTCCCCTACCTGCCCAGCAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCCGTAAAGTGTCTCAGGGTTGCTGCCAAACGAGGCATGAACTGGGCTGGGTTTTGCAGGATGGAAAAATaGAAAGTGCTGTTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: AVKCLRVAAKRGMNWAGFCRMEK*KVLFSG
Trigger: GCCGGAAAACAGCACTTTCAATTTTTCCATCCTGCA...AAACCCAGCCCAGTTCATGCCTCGTTTGGCAGCAACCCTGAGACACTTTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCATTCCACAGGAATTACCTTCTCTTGCGAGTGCAAGCCTCCAGCCGGCCCAGCAAAGGAGCATTAACCTaGACTATGCCTTTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SFHRNYLLLRVQASSRPSKGALT*TMPLAP
Trigger: TGGAGCTAAAGGCATAGTCAAGGTTAATGCTCCTTT...GCTGGGCCGGCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCTGTGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTACAGCCCAGGTAATTaGCTGAGCCTGATGGGTGTC +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVYSPGN*LSLMGV
Trigger: GACACCCATCAGGCTCAGCAAATTACCTGGGCTGTA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGTAAGGTCAAGTTGTTaGGACAGAAGGTCTACAGGG +
Preference number: 5 (lower is better)
Translates to: SGENSICLLGPWRTRGRWVRSSC*DRRSTG
Trigger: CCCTGTAGACCTTCTGTCCAAACAACTTGACCTTAC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GACCCCCACTTGCAATTCTGTGTGCACAGTCCCCTCCTTCAAGGCCGCAGCCACACTGTAGAGAGTGAGTaGAGCATAGTTTGTGATTTT +
Preference number: 5 (lower is better)
Translates to: DPHLQFCVHSPLLQGRSHTVESE*SIVCDF
Trigger: AAAATCACAAACTATGCTCAACTCACTCTCTACAGT...GTGGCTGCGGCCTTGAAGGAGGGGACTGTGCACACAGAATTGCAAGTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS TCA 90 bp GAGCTGTTTTTCCCGGATAACTGCTGGGCAAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGATGTTTGCTGGGGTCAGGACTATCCA +
Preference number: 5 (lower is better)
Translates to: ELFFPDNCWARDWLQ*STFSADVCWGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAACAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGGCCAGCCATCAACCCTaGCAGCAGCCGATCTTCAAA +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAASHQP*QQPIFK
Trigger: TTTGAAGATCGGCTGCTGCAAGGGTTGATGGCTGGC...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GGAGGCTTTGGATTGGGAAGAAGGGCAGTAATGAGGTGTGGCTGTAGCCCAGGAAGGTGGGACAACTTGTaGCTGGAAATGTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: GGFGLGRRAVMRCGCSPGRWDNL*LEMSIS
Trigger: TGAAATTGACATTTCCAGCAACAAGTTGTCCCACCT...TCCTGGGCTACAGCCACACCTCATTACTGCCCTTCTTCCCAATCCAAAGCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGGGAGGTGGGACAACTaGTTGCTGGAAATGTCAATT +
Preference number: 5 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQGRWDN*LLEMSI
Trigger: AATTGACATTTCCAGCAACAAGTTGTCCCACCTCCC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGCAGGTCCACTTCTCTaGAGGTGGAAGTGCCGCCAG +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLAGPLL*RWKCRQ
Trigger: CTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTGC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp GGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGCTTGCTTCATTTTTGCCAAGTaGGTTTCTGGAGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: GFPTRRPSRTQRHLILACFIFAK*VSGEIQ
Trigger: CTGGATCTCTCCAGAAACCAACTTGGCAAAAATGAA...GCAAGCCAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CGCTCGATGGCCGTCAGGACACAGTCTTCCATGTCGAAGTACTGCACATCCTCTAGTCCATCTTCATTTTaGCCAAGTTGGTTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: RSMAVRTQSSMSKYCTSSSPSSF*PSWFLE
Trigger: CTCCAGAAACCAACTTGGCAAAAATGAAGATGGACT...AGAGGATGTGCAGTACTTCGACATGGAAGACTGTGTCCTGACGGCCATCGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTACTGTGTCGAGGTGGTaGTCGTTCAGGCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCTVSRW*SFRQRT
Trigger: AGTCCTTTGCCTGAACGACAACCACCTCGACACAGT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AGCGTTGCAATCCTTTCCACACGGAACTTGGCTTCAATTAAATCCAGGTGCGTCAGGGCGATCTCAAACTaGGCCAGGAACTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SVAILSTRNLASIKSRCVRAISN*ARNWKY
Trigger: GTACTTCCAGTTCCTGGCCAAGTTTGAGATCGCCCT...GACGCACCTGGATTTAATTGAAGCCAAGTTCCGTGTGGAAAGGATTGCAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGACCGGGCGGATGCCCTaGGACAGCTTCTTGGCAATC +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSETGRMP*DSFLAI
Trigger: GATTGCCAAGAAGCTGTCCAAGGGCATCCGCCCGGT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAGGAGGCCCGGCCCATaGCTGTACCAGACCTCAGAG +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAERRPGP*LYQTSE
Trigger: CTCTGAGGTCTGGTACAGCAATGGGCCGGGCCTCCT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGGCCCGGCCCTGCTTaGTTTGACCCAGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLRPGPA*FDPAQN
Trigger: GTTCTGAGCTGGGTCAAACAAAGCAGGGCCGGGCCT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTCAGCCCCCTGGGACTaGGTGCCCAGGTTGGTAAAA +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTSAPWD*VPRLVK
Trigger: TTTTACCAACCTGGGCACCAAGTCCCAGGGGGCTGA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TCAGGGGAGAACTCCATCTGTCTTCTAGGTCCTTGGAGAACTAGAGGCCGATGGGCCCTGCTATCTCACTaGTTTGTGTGCTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: SGENSICLLGPWRTRGRWALLSH*FVCLLS
Trigger: TGACAATAAGCACACAAACAAGTGAGATAGCAGGGC...CCATCGGCCTCTAGTTCTCCAAGGACCTAGAAGACAGATGGAGTTCTCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGTGCTGCCTGCCTCTTaGACAGGCTGCAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLVLPAS*TGCRGW
Trigger: CCATCCTCTGCAGCCTGTCAAAGAGGCAGGCAGCAC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGACCGGCGCTGGAGTTTaGGGTCCACGGATAAAACGT +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQATGAGV*GPRIKR
Trigger: ACGTTTTATCCGTGGACCCAAAACTCCAGCGCCGGT...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CCCAAGGGCTTTCCCACACGGAGACCTTCCCGAACACAGAGACATCTGATCTTGGGTGATATTGTGCGGTaGTTAGAAGAAACATTCGTC +
Preference number: 5 (lower is better)
Translates to: PKGFPTRRPSRTQRHLILGDIVR*LEETFV
Trigger: GACGAATGTTTCTTCTAACAACCGCACAATATCACC...CAAGATCAGATGTCTCTGTGTTCGGGAAGGTCTCCGTGTGGGAAAGCCCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS TCA 90 bp TCACTGTTTTTCCCGGATAACTGCTGGGCAAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGATGTTTGCTGGGGTCAGGACTATCCA +
Preference number: 5 (lower is better)
Translates to: SLFFPDNCWARDWLQ*STFSADVCWGQDYP
Trigger: TGGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAAAAACAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS GCA 90 bp AGGGCAGCAAATCTCTTAGAAAGGCCGGGGCTACTCCTAAAGAAGTaGAGCTCTGACTCCGCAGAGCCATATCTACCATCCCTTTTTAAT +
Preference number: 5 (lower is better)
Translates to: RAANLLERPGLLLKK*SSDSAEPYLPSLFN
Trigger: ATTAAAAAGGGATGGTAGATATGGCTCTGCGGAGTCAGAGCTGCACTTCTTTAGGAGTAGCCCCGGCCTTTCTAAGAGATTTGCTGCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525395.2
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTTCAGCTTCCGGAGATaGATGAGGCCCCAGGGGATA +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTFSFRR*MRPQGI
Trigger: TATCCCCTGGGGCCTCATCAATCTCCGGAAGCTGAA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGAGCTCCCCCAGGTGGTaGTCGGAGAGGTTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAESSPRW*SERFSF
Trigger: GAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCT...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGAGAGATCCAGGGTTTaGAGCTGCCTGCAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGERSRV*SCLQVH
Trigger: GTGGACCTGCAGGCAGCTCAAAACCCTGGATCTCTC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGAAATTCCAGCACACTaGCTGCCTCAGTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLEIPAH*LPQSRS
Trigger: GCTCCGGGACTGAGGCAGCAAGTGTGCTGGAATTTC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGCCCTTGGACAGCTTCTaGGCAATCTGGAGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEPLDSF*AIWSWW
Trigger: CCACCAGCTCCAGATTGCCAAGAAGCTGTCCAAGGG...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCAGATGGAATCTGGCTaGCATCTGGGGGTTAACTGG +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTQMESG*HLGVNW
Trigger: CCAGTTAACCCCCAGATGCAAGCCAGATTCCATCTG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCGCGGAGACCCCCACTaGCAATTCTGTGTGCACAGT +
Preference number: 5 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGRGDPH*QFCVHS
Trigger: ACTGTGCACACAGAATTGCAAGTGGGGGTCTCCGCG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTACCGGCGCTGGAGTTTaGGGTCCACGGATAAAACGT +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTTGAGV*GPRIKR
Trigger: ACGTTTTATCCGTGGACCCAAAACTCCAGCGCCGGT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGCTGTCTGTGAAGCTTaGGGGCAGTACAGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEAVCEA*GQYSPG
Trigger: ACCTGGGCTGTACTGCCCCAAAGCTTCACAGACAGC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ACCAGCACTATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATCCCTCTCTCAGTCTGTaGGTCTCTTGCCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: TSTMLLDFSISRPVSQIYPSLSL*VSCPPP
Trigger: AGGTGGAGGGCAAGAGACCAACAGACTGAGAGAGGG...ATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCATAGTGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CAA 90 bp AAGGAATTGACGTGGTCCGTGATGAAAGCCATGGCTGAGAAGTCCCTCACTTCTTTTGGGGCCTTCTTTTaGGATTTCTGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: KELTWSVMKAMAEKSLTSFGAFF*DFCRHI
Trigger: AATGTGCCTGCAGAAATCCAAAAAGAAGGCCCCAAA...AGAAGTGAGGGACTTCTCAGCCATGGCTTTCATCACGGACCACGTCAATTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp AGGCTGATCAGCATCCGTGCTATAAACCTTTGCCAGAAGCCAACGGGAACGAAGATCTCATGTAAGTGTTaGAAGGTGATGTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RLISIRAINLCQKPTGTKISCKC*KVMSGK
Trigger: CTTCCCAGACATCACCTTCAAACACTTACATGAGAT...CTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATAGCACGGATGCTGATCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTAGGAATTACCTTCTCTaGCGAGTGCAAGCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTRNYLL*RVQASS
Trigger: GCTGGAGGCTTGCACTCGCAAGAGAAGGTAATTCCT...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCCGGCCCTGCTTTGTTaGACCCAGCTCAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEPALLC*TQLRTG
Trigger: TCCTGTTCTGAGCTGGGTCAAACAAAGCAGGGCCGG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGCAGTGGGGGAGCTTTTaGAGCCAGGATGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEQWGSF*SQDEPG
Trigger: TCCTGGCTCATCCTGGCTCAAAAAGCTCCCCCACTG...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATCACAGAGATAAGAGGTaGGGGCACAGAAATAAGGGA +
Preference number: 5 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYHRDKR*GHRNKG
Trigger: TCCCTTATTTCTGTGCCCCAACCTCTTATCTCTGTG...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGAACTACTGTTGAGTTaGTATTGGGGTCAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYELLLS*YWGQAA
Trigger: TGCCGCTTGACCCCAATACAAACTCAACAGTAGTTC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGCTGTTTTCCGGCTATTaGGAACTACTGTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQLFSGY*ELLLSL
Trigger: CAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAG...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATAAAGGAGGCTTTGGATaGGGAAGAAGGGCAGTAATG +
Preference number: 5 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYKGGFG*GRRAVM
Trigger: CATTACTGCCCTTCTTCCCAATCCAAAGCCTCCTTT...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAATGTTGATGTGCTCCTaGACGTCAAGGGACCACACC +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLMLMCS*TSRDHT
Trigger: GGTGTGGTCCCTTGACGTCAAGGAGCACATCAACAT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGTTCTTTGTAATTCAATaGCTGCCCATGCCCTTAACC +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVFFVIQ*LPMPLT
Trigger: GGTTAAGGGCATGGGCAGCAATTGAATTACAAAGAA...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGTTGTTTGTGTGCTTATaGTCAACTCTACCTATGAGG +
Preference number: 5 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQLFVCL*STLPMR
Trigger: CCTCATAGGTAGAGTTGACAATAAGCACACAAACAA...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGATGTGGGAGGCTGGATaGAAGTCGGTGCCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEMWEAG*KSVPGK
Trigger: TTTTCCTGGCACCGACTTCAATCCAGCCTCCCACAT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTTGGGGCCTTCTTTTaGGATTTCTGCAGGCACATT +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQAFGAFF*DFCRHI
Trigger: AATGTGCCTGCAGAAATCCAAAAAGAAGGCCCCAAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp TATAAACCTTTGCCAGAAGCCAACGGGAACGAAGCTCATCTTAAATACCCTCTGATCATCTTCATCAGCTaGCACTTTTCCGCTTTCCGC +
Preference number: 5 (lower is better)
Translates to: YKPLPEANGNEAHLKYPLIIFIS*HFSAFR
Trigger: GCGGAAAGCGGAAAAGTGCAAGCTGATGAAGATGAT...CAGAGGGTATTTAAGATGAGCTTCGTTCCCGTTGGCTTCTGGCAAAGGTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525284.5
ENST00000531270.5
CDS-3UTR CAA 90 bp ATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGCAGCATCCACCAGGCCACAGCTTCGTTCTaGAAAGAATCTGTTTATTTT +
Preference number: 5 (lower is better)
Translates to: IFKGAHNSVLCHHGSIHQATASF*KESVYF
Trigger: AAAATAAACAGATTCTTTCAAGAACGAAGCTGTGGC...CTGGTGGATGCTGCCGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGCCTTGTTCTGTATCTTaGGGCACTTTTACCAAGATT +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVPCSVS*GTFTKI
Trigger: AATCTTGGTAAAAGTGCCCAAAGATACAGAACAAGG...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GCTCAGAGGCCTGACGCACTGTGCTGCAAGCTGCTTTCAAACAAATGCATTTATGGCTGCTTACTGGATTaGAAATTGGTGAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: AQRPDALCCKLLSNKCIYGCLLD*KLVRCF
Trigger: GAAACATCTCACCAATTTCAAATCCAGTAAGCAGCC...ATAAATGCATTTGTTTGAAAGCAGCTTGCAGCACAGTGCGTCAGGCCTCTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTCACAGAAATAAGGGATaGGGGCGCAGAGATATGAGG +
Preference number: 5 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGHRNKG*GRRDMR
Trigger: CCTCATATCTCTGCGCCCCAATCCCTTATTTCTGTG...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTGCAGGATGGAAAAATaGAAAGTGCTGTTTTCCGGC +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQACRMEK*KVLFSG
Trigger: GCCGGAAAACAGCACTTTCAATTTTTCCATCCTGCA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTACAGCCCAGGTAATTaGCTGAGCCTGATGGGTGTC +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEYSPGN*LSLMGV
Trigger: GACACCCATCAGGCTCAGCAAATTACCTGGGCTGTA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGGAAGGAAAGGAGTTCTaGTTTTGTAGAAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTEGKEF*FCRRGW
Trigger: CCAACCCCTTCTACAAAACAAGAACTCCTTTCCTTC...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGGGATGACAAGTTTTTaGGGGCACAGTCCAAGTTGG +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEGMTSF*GHSPSW
Trigger: CCAACTTGGACTGTGCCCCAAAAAACTTGTCATCCC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGACACGTTCTGGTGGGTaGTTTATGGATTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTTRSGG*FMDFCS
Trigger: AGAGCAGAAATCCATAAACAACCCACCAGAACGTGT...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525284.5
CDS-3UTR CAA 90 bp ATTTTGAGGGTGGGTTGTTATAAAAGTGAGTTCTTCCCTCTCTCAGTCTGTTGGGCCGAAGCAGGAATATaGCAATGTCTTCATTCCCTG +
Preference number: 5 (lower is better)
Translates to: ILRVGCYKSEFFPLSVCWAEAGI*QCLHSL
Trigger: CAGGGAATGAAGACATTGCAATATTCCTGCTTCGGC...CCAACAGACTGAGAGAGGGAAGAACTCACTTTTATAACAACCCACCCTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGTTTCTCAGCAGATGTTaGCTGGGGTCAGGACTATCC +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEFLSRC*LGSGLS
Trigger: GGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAA...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAATTTCTGCAGGCACATaGCTGATGGTCAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLISAGT*LMVRSS
Trigger: TGAAGACCTGACCATCAGCAATGTGCCTGCAGAAAT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAGTTTCCCCTTCCTTTaGTCGGTGGAGAGGAATGTA +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLSFPFL*SVERNV
Trigger: TACATTCCTCTCCACCGACAAAAGGAAGGGGAAACT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTTGGGTAGGTAAAGGAAAAAGGGGGTTTGTTCTCTGGCGGGCAGGAGTGGCCACAGCTTCGTTCTaGAAAGAATCTGTTTATTTT +
Preference number: 5 (lower is better)
Translates to: KIWVGKGKRGFVLWRAGVATASF*KESVYF
Trigger: AAAATAAACAGATTCTTTCAAGAACGAAGCTGTGGC...CACTCCTGCCCGCCAGAGAACAAACCCCCTTTTTCCTTTACCTACCCAAATCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGAACTACTGTTGAGTTaGTATTGGGGTCAAGCGGCA +
Preference number: 5 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGELLLS*YWGQAA
Trigger: TGCCGCTTGACCCCAATACAAACTCAACAGTAGTTC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGAGCAACATTTTACTGTaGTGGAGACTGTTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSESNILL*WRLFPC
Trigger: GCAGGGAAACAGTCTCCACAACAGTAAAATGTTGCT...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CTGCTATCTCACTTGTTTGTGTGCTTATTGTCAACTCTACCTATGAGGAGTGAGGCCCTGCTATCTCACTaGTTTGTGTGCTTATTGTCA +
Preference number: 5 (lower is better)
Translates to: LLSHLFVCLLSTLPMRSEALLSH*FVCLLS
Trigger: TGACAATAAGCACACAAACAAGTGAGATAGCAGGGC...CTCACTCCTCATAGGTAGAGTTGACAATAAGCACACAAACAAGTGAGATAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CACTCTGTGTTTTCATTTTCAAAGGTGCACACAACAGTGTCCTTTGCCACCACGCCTTGTTCTGTATCTTaGGGCACTTTTACCAAGATT +
Preference number: 5 (lower is better)
Translates to: HSVFSFSKVHTTVSFATTPCSVS*GTFTKI
Trigger: AATCTTGGTAAAAGTGCCCAAAGATACAGAACAAGG...CGTGGTGGCAAAGGACACTGTTGTGTGCACCTTTGAAAATGAAAACACAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTTGCATTTATTATATCTaGGAGAACATTCCAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCCIYYI*ENIPVQ
Trigger: CTGGACTGGAATGTTCTCCAAGATATAATAAATGCA...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp GTGCTGTTTTCCGGCTATTTGGAACTACTGTTGAGTTTGTATTGGGGTCAAGCGTTACTGGATTTGAAATaGGTGAGATGTTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VLFSGYLELLLSLYWGQALLDLK*VRCFLG
Trigger: GCCCAAGAAACATCTCACCAATTTCAAATCCAGTAA...CGCTTGACCCCAATACAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAAAGAGAAGGGAGAAATaGAAGTGTGGCGCCAAGATT +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLKRREK*KCGAKI
Trigger: AATCTTGGCGCCACACTTCAATTTCTCCCTTCTCTT...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp CGCTTGGCTGATTTGACTAATAAAGGCTGGTCTGTTATCAGACAGTATAGAGGTGAAGGAAAGGAGTTCTaGTTTTGTAGAAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: RLADLTNKGWSVIRQYRGEGKEF*FCRRGW
Trigger: CCAACCCCTTCTACAAAACAAGAACTCCTTTCCTTC...ACCTCTATACTGTCTGATAACAGACCAGCCTTTATTAGTCAAATCAGCCAAGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATCCATAAATCCCCTGTGGACAACGTTCCTTTTCGTACTCCGCTGTACACGTGTACTGTAGAGAGTGAGTaGAGCATAGTTTGTGATTTT +
Preference number: 5 (lower is better)
Translates to: IHKSPVDNVPFRTPLYTCTVESE*SIVCDF
Trigger: AAAATCACAAACTATGCTCAACTCACTCTCTACAGT...ACACGTGTACAGCGGAGTACGAAAAGGAACGTTGTCCACAGGGGATTTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp ATGCTCTTGGACTTCTCAATCTCCAGACCTGTAAGCCAAATATATTTCTGTTTATTTCTCAGCAGATGTTaGCTGGGGTCAGGACTATCC +
Preference number: 5 (lower is better)
Translates to: MLLDFSISRPVSQIYFCLFLSRC*LGSGLS
Trigger: GGATAGTCCTGACCCCAGCAAACATCTGCTGAGAAA...TAAACAGAAATATATTTGGCTTACAGGTCTGGAGATTGAGAAGTCCAAGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532029.6
CDS-3UTR CAA 90 bp GATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTACTTTGTTTGTGTGCTTATaGTCAACTCTACCTATGAGG +
Preference number: 5 (lower is better)
Translates to: DYYVQTNRACAPAASKFTLFVCL*STLPMR
Trigger: CCTCATAGGTAGAGTTGACAATAAGCACACAAACAA...AGTAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGGCTGCTTACTGGATTaGAAATTGGTGAGATGTTTC +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLGCLLD*KLVRCF
Trigger: GAAACATCTCACCAATTTCAAATCCAGTAAGCAGCC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTAGTGCTTAAAAGAGTATaGTCTAAGTTGGCACCAGAG +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLVLKRV*SKLAPE
Trigger: CTCTGGTGCCAACTTAGACAATACTCTTTTAAGCAC...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTATCTCATGTAAGTGTTaGAAGGTGATGTCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSISCKC*KVMSGK
Trigger: CTTCCCAGACATCACCTTCAAACACTTACATGAGAT...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTTTCTTTGTAATTCAATaGCTGCCCATGCCCTTAACC +
Preference number: 5 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSFFVIQ*LPMPLT
Trigger: GGTTAAGGGCATGGGCAGCAATTGAATTACAAAGAA...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AGGAGGTTCAGCATAGTCCTGCCAGCAAAGATTATGTATTTAAGAGTTCAGAGTCTGTTTTCCGGCTATTaGGAACTACTGTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RRFSIVLPAKIMYLRVQSLFSGY*ELLLSL
Trigger: CAAACTCAACAGTAGTTCCAAATAGCCGGAAAACAG...ACTCTGAACTCTTAAATACATAATCTTTGCTGGCAGGACTATGCTGAACCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp AAGATTATTATGTGCAAACAAACAGGGCCTGTGCTCCAGCTGCGTCCAAATTTATTATGGAGTGAGGTATaGAGGATAGGAGAGTATATG +
Preference number: 5 (lower is better)
Translates to: KIIMCKQTGPVLQLRPNLLWSEV*RIGEYM
Trigger: CATATACTCTCCTATCCTCAATACCTCACTCCATAA...TAAATTTGGACGCAGCTGGAGCACAGGCCCTGTTTGTTTGCACATAATAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS-3UTR CAA 90 bp TTTGGTATAAATCCCATACAATGTGATTTCACAACCAGAAGCCTGACTGCTGAGGGTGATATTGTGCGGTaGTTAGAAGAAACATTCGTC +
Preference number: 5 (lower is better)
Translates to: FGINPIQCDFTTRSLTAEGDIVR*LEETFV
Trigger: GACGAATGTTTCTTCTAACAACCGCACAATATCACC...CTCAGCAGTCAGGCTTCTGGTTGTGAAATCACATTGTATGGGATTTATACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000388948.8
ENST00000526457.3
CDS GCA 72 bp CGCGGCGCGGATGCCTTCCGTCCTGCGGGACCGCGCTaGAGGGTCACCGCCCCGCGTGGACGGCTTGCCGCC +
Preference number: 6 (lower is better)
Translates to: RGADAFRPAGPR*RVTAPRGRLAA
Trigger: GGCGGCAAGCCGTCCACGCGGGGCGGTGACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCCGCGCCGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
CDS GCA 72 bp CGCCGCCGCGGTCTCCCCGCCTGTACGCGGCGCGGATaGCTTCCGTCCTGCGGGACCGCGCTGCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: RRRGLPACTRRG*LPSCGTALQGH
Trigger: GTGACCCTGCAGCGCGGTCCCGCAGGACGGAAGGCATCCGCGCCGCGTACAGGCGGGGAGACCGCGGCGGCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
CDS CAA 72 bp GACCGCGCTGCAGGGTCACCGCCCCGCGTGGACGGCTaGCCGCCCGTGTCCCCGGCACCGTTAAGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: DRAAGSPPRVDG*PPVSPAPLSVS
Trigger: GGAGACGCTTAACGGTGCCGGGGACACGGGCGGCAAGCCGTCCACGCGGGGCGGTGACCCTGCAGCGCGGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
CDS TCA 72 bp TGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTTaGACTCCACGGACTCAACCCTGGCGCGGGGGACCC +
Preference number: 6 (lower is better)
Translates to: WPCWPVPRCPRR*TPRTQPWRGGP
Trigger: GGGTCCCCCGCGCCAGGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS CAA 72 bp GTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTaGAACTCCACGGACTCAACCCTGGCGCGGGGGACC +
Preference number: 6 (lower is better)
Translates to: VAMLAGPPMSQT*NSTDSTLARGT
Trigger: GGTCCCCCGCGCCAGGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS TCA 72 bp TGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTTaGACTCCACGGACTCAACCTTGGCTCTCGAGCCAG +
Preference number: 6 (lower is better)
Translates to: WPCWPVPRCPRR*TPRTQPWLSSQ
Trigger: CTGGCTCGAGAGCCAAGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS CCA 72 bp TTGGTGGTCCTGATGGTGGCCTCTCCATGCACCACCTaGGGGGCCCTCCCCGTCTGTAAGATCTCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LVVLMVASPCTT*GALPVCKISRR
Trigger: CCTCCTGGAGATCTTACAGACGGGGAGGGCCCCCCAGGTGGTGCATGGAGAGGCCACCATCAGGACCACCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CAA 72 bp GCCGTGTGTCCAAAATACGCTGCCACCACGGCTGGGTaGTCATCCGTGGGCTCGGTGGGCAGCTCCACCAGT +
Preference number: 6 (lower is better)
Translates to: AVCPKYAATTAG*SSVGSVGSSTS
Trigger: ACTGGTGGAGCTGCCCACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CAA 72 bp GCCCTCCCCGTCTGTAAGATCTCCAGGAGGGTGGACTaGCCCTGGCGCGGGGGACCCACGATGATCATCTTC +
Preference number: 6 (lower is better)
Translates to: ALPVCKISRRVD*PWRGGPTMIIF
Trigger: GAAGATGATCATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGGAGATCTTACAGACGGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CAA 72 bp GTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTaGAACTCCACGGACTCAACCTTGGCTCTCGAGCCA +
Preference number: 6 (lower is better)
Translates to: VAMLAGPPMSQT*NSTDSTLALEP
Trigger: TGGCTCGAGAGCCAAGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388948.8
CDS CAA 90 bp TGGTTGACAGTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTaGAACTCCACGGACTCAACCTACTTGGCTCTCGAGCCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: WLTVAMLAGPPMSQT*NSTDSTYLALEPAG
Trigger: GCCGGCTGGCTCGAGAGCCAAGTAGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCACTGTCAACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS TCA 72 bp CCGTGGGCTCGGTGGGCAGCTCCACCAGTCTCTTGCTaGGTAGGTAGCGGACCATCTCCAGATCCCCATAGG +
Preference number: 6 (lower is better)
Translates to: PWARWAAPPVSC*VGSGPSPDPHR
Trigger: CCTATGGGGATCTGGAGATGGTCCGCTACCTACTCAGCAAGAGACTGGTGGAGCTGCCCACCGAGCCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS TCA 72 bp TGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTTaGACTCCACGGACTCAACCTACTTGGCTCTCGAGC +
Preference number: 6 (lower is better)
Translates to: WPCWPVPRCPRR*TPRTQPTWLSS
Trigger: GCTCGAGAGCCAAGTAGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CCA 72 bp AGGTCCCGCTGTTGTCACTGCCACTGCCGCTGGCTGTaGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCT +
Preference number: 6 (lower is better)
Translates to: RSRCCHCHCRWL*GALRRGLVAMA
Trigger: AGCCATGGCTACGAGTCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS CCA 72 bp AACTGCCGTGTGTCCAAAATACGCTGCCACCACGGCTaGGTTGTCATCCGTGGGCTCGGTGGGCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: NCRVSKIRCHHG*VVIRGLGGQLH
Trigger: GTGGAGCTGCCCACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CAA 72 bp GTGGCCATGCTGGCCGGTCCCCCGATGTCCCAGACGTaGAACTCCACGGACTCAACCTACTTGGCTCTCGAG +
Preference number: 6 (lower is better)
Translates to: VAMLAGPPMSQT*NSTDSTYLALE
Trigger: CTCGAGAGCCAAGTAGGTTGAGTCCGTGGAGTTCAACGTCTGGGACATCGGGGGACCGGCCAGCATGGCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CAA 90 bp TGCACAACTGCCGTGTGTCCAAAATACGCTGCCACCACGGCTGGGTaGTCATCCGTGGGCTCGGTGGGCAGCTCCACCAGTCTCTTGCTG +
Preference number: 6 (lower is better)
Translates to: CTTAVCPKYAATTAG*SSVGSVGSSTSLLL
Trigger: CAGCAAGAGACTGGTGGAGCTGCCCACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGCAGTTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS CAA 90 bp ATGATTTCGTCCGATGACTGCACGCCAGGCAGCTCCCCCAGGTGGTaGTCGGAGAGGTTCAGCTTCCGGAGATTGATGAGGCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: MISSDDCTPGSSPRW*SERFSFRRLMRPQG
Trigger: CCCCTGGGGCCTCATCAATCTCCGGAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAATCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS TCA 72 bp GTGGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCTCTGAGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VGCIKAWTRSHG*AESFLALRRRR
Trigger: CCGCCGCCGCCTCAGAGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGTCCACGCCTTAATGCACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
CDS GCA 72 bp CAGCCGATCTTCAAAGGCAGGTCCCGCTGTTGTCACTaGCACTGCCGCTGGCTGTGGGGTGCATTAAGGCGT +
Preference number: 6 (lower is better)
Translates to: QPIFKGRSRCCH*HCRWLWGALRR
Trigger: ACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCTGCCTTTGAAGATCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS GCA 72 bp ACACACACACGCACACACGTGGCTCCTGTCAGCCTCTaGAGCCTGTACCCCAGACCCCACACTTTGAGCCCT +
Preference number: 6 (lower is better)
Translates to: THTRTHVAPVSL*SLYPRPHTLSP
Trigger: AGGGCTCAAAGTGTGGGGTCTGGGGTACAGGCTGCAGAGGCTGACAGGAGCCACGTGTGTGCGTGTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525617.2
CDS CCA 72 bp CAGCTGACTCCTCCGGCCCCACACACCAGTACATGCTaGGGGGTCTTTGCGACATGCCAGCCATCAACCCTT +
Preference number: 6 (lower is better)
Translates to: QLTPPAPHTSTC*GVFATCQPSTL
Trigger: AAGGGTTGATGGCTGGCATGTCGCAAAGACCCCCCAGCATGTACTGGTGTGTGGGGCCGGAGGAGTCAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
ENST00000534045.5
CDS CCA 72 bp CCCGTCTGTAAGATCTCCAGGAGGGTGGACTTGCCCTaGCGCGGGGGACCCACGATGATCATCTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: PVCKISRRVDLP*RGGPTMIIFIS
Trigger: GCTGATGAAGATGATCATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCCTGGAGATCTTACAGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS CAA 72 bp TCCGATGACTGCACGCCAGGCAGCTCCCCCAGGTGGTaGTCGGAGAGGTTCAGCTTCCGGAGATTGATGAGG +
Preference number: 6 (lower is better)
Translates to: SDDCTPGSSPRW*SERFSFRRLMR
Trigger: CCTCATCAATCTCCGGAAGCTGAACCTCTCCGACAACCACCTGGGGGAGCTGCCTGGCGTGCAGTCATCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 90 bp TTGCCCAGCTGCCCCAGCTCAGGAGGGAGCTCCCGGAGGCCAGGGTaGCTGAAGACAGATGTGTCCACCACGAGAGAATACACACACACA +
Preference number: 6 (lower is better)
Translates to: LPSCPSSGGSSRRPG*LKTDVSTTREYTHT
Trigger: TGTGTGTGTGTATTCTCTCGTGGTGGACACATCTGTCTTCAGCAACCCTGGCCTCCGGGAGCTCCCTCCTGAGCTGGGGCAGCTGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525617.2
CDS TCA 72 bp GTTAAGCGTCTCCATGGCACGTTCTGGACACACAGCTaGCTCCTCCGGCCCCACACACCAGTACATGCTGGG +
Preference number: 6 (lower is better)
Translates to: VKRLHGTFWTHS*LLRPHTPVHAG
Trigger: CCCAGCATGTACTGGTGTGTGGGGCCGGAGGAGTCAGCTGTGTGTCCAGAACGTGCCATGGAGACGCTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000527698.1
ENST00000531270.5
ENST00000532029.6
ENST00000534045.5
CDS TCA 72 bp GGAGGGTGGACTTGCCCTGGCGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGCACTTTTCCGCTTTCC +
Preference number: 6 (lower is better)
Translates to: GGWTCPGAGDPR*SSSSACTFPLS
Trigger: GGAAAGCGGAAAAGTGCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGCGCCAGGGCAAGTCCACCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000538064.1
CDS GCA 72 bp ATCTTCAAAGGCAGGTCCCGCTGTTGTCACTGCCACTaGCGCTGGCTGTGGGGTGCATTAAGGCGTGGACTC +
Preference number: 6 (lower is better)
Translates to: IFKGRSRCCHCH*RWLWGALRRGL
Trigger: GAGTCCACGCCTTAATGCACCCCACAGCCAGCGGCAGTGGCAGTGACAACAGCGGGACCTGCCTTTGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000527698.1
ENST00000532029.6
ENST00000534045.5
CDS GCA 72 bp CCGCGTCCCTGCCTGCCAGGAAGGTCCCCTGTAGCTTaGAGAGACCATGGTAGACAGAGCAGTTGTATCTGC +
Preference number: 6 (lower is better)
Translates to: PRPCLPGRSPVA*RDHGRQSSCIC
Trigger: GCAGATACAACTGCTCTGTCTACCATGGTCTCTGCAAGCTACAGGGGACCTTCCTGGCAGGCAGGGACGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534045.5
CDS TCA 72 bp TCCAGGGTTTTGAGCTGCCTGCAGGTCCACTTCTCTTaGGGTGGAAGTGCCGCCAGCTGGTTCCCCTGTAAC +
Preference number: 6 (lower is better)
Translates to: SRVLSCLQVHFS*GGSAASWFPCN
Trigger: GTTACAGGGGAACCAGCTGGCGGCACTTCCACCTCAAGAGAAGTGGACCTGCAGGCAGCTCAAAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS TCA 72 bp CTCCACGGACTCAACCCTGGCGCGGGGGACCCACGATaGTCATCTTCATCAGCTTGCACTTTTCCGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LHGLNPGAGDPR*SSSSACTFPLS
Trigger: GGAAAGCGGAAAAGTGCAAGCTGATGAAGATGATCATCGTGGGTCCCCCGCGCCAGGGTTGAGTCCGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531270.5
CDS GCA 72 bp CAATTCCTGCACAACTGCCGTGTGTCCAAAATACGCTaGCACCACGGCTGGGTTGTCATCCGTGGGCTCGGT +
Preference number: 6 (lower is better)
Translates to: QFLHNCRVSKIR*HHGWVVIRGLG
Trigger: ACCGAGCCCACGGATGACAACCCAGCCGTGGTGGCAGCGTATTTTGGACACACGGCAGTTGTGCAGGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS GCA 72 bp TCAAGTAGCCTGGAACAGATGATTTCGTCCGATGACTaGACGCCAGGCAGCTCCCCCAGGTGGTTGTCGGAG +
Preference number: 6 (lower is better)
Translates to: SSSLEQMISSDD*TPGSSPRWLSE
Trigger: CTCCGACAACCACCTGGGGGAGCTGCCTGGCGTGCAGTCATCGGACGAAATCATCTGTTCCAGGCTACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CCA 72 bp TGGCAAGCCAAGGCCAGCATCCAGTTCAGAAGCCGCTaGGGACTGCAGGGACCTGGTAAGGACTCAAGCAAT +
Preference number: 6 (lower is better)
Translates to: WQAKASIQFRSR*GLQGPGKDSSN
Trigger: ATTGCTTGAGTCCTTACCAGGTCCCTGCAGTCCCCAGCGGCTTCTGAACTGGATGCTGGCCTTGGCTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS GCA 72 bp TTCCAAGAGAGACACAGAGTAGGCACTGGACTCATCTaGACCCACACCAGGCGGGCAGTCACTTTCCACCAG +
Preference number: 6 (lower is better)
Translates to: FQERHRVGTGLI*THTRRAVTFHQ
Trigger: CTGGTGGAAAGTGACTGCCCGCCTGGTGTGGGTGCAGATGAGTCCAGTGCCTACTCTGTGTCTCTCTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525395.2
CDS TCA 72 bp CTGCCTCAGTCCCGGAGCGCTGGCGACCTCTGGTGGTaGAAAAGGCAATACGCTTCGTTTTCAGTCCATCTT +
Preference number: 6 (lower is better)
Translates to: LPQSRSAGDLWW*KRQYASFSVHL
Trigger: AAGATGGACTGAAAACGAAGCGTATTGCCTTTTTCACCACCAGAGGTCGCCAGCGCTCCGGGACTGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS TCA 72 bp GTGGGGTGCATTAAGGCGTGGACTCGTAGCCATGGCTaGGCAGAAAGCTTTCTTGCTCTGTTGCAGGGGAAG +
Preference number: 6 (lower is better)
Translates to: VGCIKAWTRSHG*AESFLALLQGK
Trigger: CTTCCCCTGCAACAGAGCAAGAAAGCTTTCTGCTCAGCCATGGCTACGAGTCCACGCCTTAATGCACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534045.5
CDS TCA 72 bp TACTCAACCCTCTTCTGGAGGCCTGTCTCAGCCTGCTaGGCCCTCATCCCAGCTTACATCTATCGAGATGCC +
Preference number: 6 (lower is better)
Translates to: YSTLFWRPVSAC*ALIPAYIYRDA
Trigger: GGCATCTCGATAGATGTAAGCTGGGATGAGGGCTCAGCAGGCTGAGACAGGCCTCCAGAAGAGGGTTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532145.1
CDS GCA 72 bp TGCAACCATGTAGACCATGTCCCGGACAGGCCACCCTaGCCAGCATACCTTCACAGAGGAGACTGGCATAAT +
Preference number: 6 (lower is better)
Translates to: CNHVDHVPDRPP*PAYLHRGDWHN
Trigger: ATTATGCCAGTCTCCTCTGTGAAGGTATGCTGGGCAGGGTGGCCTGTCCGGGACATGGTCTACATGGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526457.3
CDS CCA 72 bp ATGAGCCAGTCTAGGTCTACCCAGGGCAGTCTGAGATaGGACCATTTCACACGGAGAGCTGTTTTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: MSQSRSTQGSLR*DHFTRRAVFPG
Trigger: TCCGGGAAAAACAGCTCTCCGTGTGAAATGGTCCCATCTCAGACTGCCCTGGGTAGACCTAGACTGGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 90 bp AAGCTCTTCAGTAGGCAAACCGAGGGAGGGACTGTGTCGAGGTGGTaGTCGTTCAGGCAAAGGACTTCCAAAGACTCACTTAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: KLFSRQTEGGTVSRW*SFRQRTSKDSLRKA
Trigger: GGCCTTCCTAAGTGAGTCTTTGGAAGTCCTTTGCCTGAACGACAACCACCTCGACACAGTCCCTCCCTCGGTTTGCCTACTGAAGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS TCA 72 bp TGGGGCCTTCTTTTTGGATTTCTGCAGGCACATTGCTaGTGGTCAGGTCTTCAGTGTCCAGCTGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: WGLLFGFLQAHC*WSGLQCPAARG
Trigger: ACCTCTGGCAGCTGGACACTGAAGACCTGACCATCAGCAATGTGCCTGCAGAAATCCAAAAAGAAGGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000525617.2
ENST00000531270.5
CDS CCA 72 bp TTCAGTAGGCAAACCGAGGGAGGGACTGTGTCGAGGTaGTTGTCGTTCAGGCAAAGGACTTCCAAAGACTCA +
Preference number: 6 (lower is better)
Translates to: FSRQTEGGTVSR*LSFRQRTSKDS
Trigger: TGAGTCTTTGGAAGTCCTTTGCCTGAACGACAACCACCTCGACACAGTCCCTCCCTCGGTTTGCCTACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 72 bp AGTAGGCAAACCGAGGGAGGGACTGTGTCGAGGTGGTaGTCGTTCAGGCAAAGGACTTCCAAAGACTCACTT +
Preference number: 6 (lower is better)
Translates to: SRQTEGGTVSRW*SFRQRTSKDSL
Trigger: AAGTGAGTCTTTGGAAGTCCTTTGCCTGAACGACAACCACCTCGACACAGTCCCTCCCTCGGTTTGCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS TCA 72 bp TTCCCGGATAACTGCTGGGCAAGGGACTGGCTTCAATaGAGTACTTTCTCAGCAGATGTTTGCTGGGGTCAG +
Preference number: 6 (lower is better)
Translates to: FPDNCWARDWLQ*STFSADVCWGQ
Trigger: CTGACCCCAGCAAACATCTGCTGAGAAAGTACTTCATTGAAGCCAGTCCCTTGCCCAGCAGTTATCCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
ENST00000532029.6
CDS GCA 72 bp AATCTCTTAGAAAGGCCGGGGCTACTCCTAAAGAAGTaGAGCTCTGACTCCGCAGAGCCATATCTACCATCC +
Preference number: 6 (lower is better)
Translates to: NLLERPGLLLKK*SSDSAEPYLPS
Trigger: GGATGGTAGATATGGCTCTGCGGAGTCAGAGCTGCACTTCTTTAGGAGTAGCCCCGGCCTTTCTAAGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525395.2
CDS CCA 72 bp GAAAGCTTTCTTGCTCTGTTGCAGGGGAAGTGTTCGTaGGAGAAAAACTTCGCGGCCTCATACTGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: ESFLALLQGKCS*EKNFAASYCEG
Trigger: CCCTTCACAGTATGAGGCCGCGAAGTTTTTCTCCCACGAACACTTCCCCTGCAACAGAGCAAGAAAGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534045.5
CDS GCA 72 bp GGTGCAAGAATCCAGGAGGGAGGTGGGACAACTTGTTaGTGGAAATGTCAATTTCAAGTAGCCTGGAACAGA +
Preference number: 6 (lower is better)
Translates to: GARIQEGGGTTC*WKCQFQVAWNR
Trigger: TCTGTTCCAGGCTACTTGAAATTGACATTTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATTCTTGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 72 bp AGGTGCAAGAATCCAGGAGGGAGGTGGGACAACTTGTaGCTGGAAATGTCAATTTCAAGTAGCCTGGAACAG +
Preference number: 6 (lower is better)
Translates to: RCKNPGGRWDNL*LEMSISSSLEQ
Trigger: CTGTTCCAGGCTACTTGAAATTGACATTTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATTCTTGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 72 bp GAGAGGTGCAAGAATCCAGGAGGGAGGTGGGACAACTaGTTGCTGGAAATGTCAATTTCAAGTAGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: ERCKNPGGRWDN*LLEMSISSSLE
Trigger: TTCCAGGCTACTTGAAATTGACATTTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATTCTTGCACCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5
CDS CAA 90 bp AGTTTTGAGAGGTGCAAGAATCCAGGAGGGAGGTGGGACAACTTGTaGCTGGAAATGTCAATTTCAAGTAGCCTGGAACAGATGATTTCG +
Preference number: 6 (lower is better)
Translates to: SFERCKNPGGRWDNL*LEMSISSSLEQMIS
Trigger: CGAAATCATCTGTTCCAGGCTACTTGAAATTGACATTTCCAGCAACAAGTTGTCCCACCTCCCTCCTGGATTCTTGCACCTCTCAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000388948.8
ENST00000525284.5
ENST00000531270.5