Pregenerated sensors for LRRIQ4 (Homo sapiens)
Ensembl gene IDs: ENSG00000188306Ensembl transcript IDs: ENST00000340806.6
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTCTCCAGGCGGTTCCCGCTCAGCCCGATTTCCGTCATCTTCCTaGGCTCGGCGAAGCTCTTCGGGATGGAGTGGAGGAGGTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: PSPGGSRSARFPSSS*ARRSSSGWSGGGCG Trigger: CCCACAACCTCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAAGATGACGGAAATCGGGCTGAGCGGGAACCGCCTGGAGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 90 bp | CGGTGTTTCCCAGGTAGAGCAGGTGCAGCGAGGTCCACCTGCAAATaGGGCGTGGCACCTTCTCCAGGCGGTTCCCGCTCAGCCCGATTT | + |
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Preference number: 5 (lower is better) Translates to: RCFPGRAGAARSTCK*GVAPSPGGSRSARF Trigger: AAATCGGGCTGAGCGGGAACCGCCTGGAGAAGGTGCCACGCCTCATTTGCAGGTGGACCTCGCTGCACCTGCTCTACCTGGGAAACACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | TCCCAGGTAGAGCAGGTGCAGCGAGGTCCACCTGCAAATGAGGCGTaGCACCTTCTCCAGGCGGTTCCCGCTCAGCCCGATTTCCGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SQVEQVQRGPPANEA*HLLQAVPAQPDFRH Trigger: ATGACGGAAATCGGGCTGAGCGGGAACCGCCTGGAGAAGGTGCCACGCCTCATTTGCAGGTGGACCTCGCTGCACCTGCTCTACCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GGGATGGAGTGGAGGAGGTTGTGGGATAAATCGAGCACCGACAGTTaGCTACACTGGCACAAGGACGCGGGCAGAACGGGAAGGTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: GMEWRRLWDKSSTDS*LHWHKDAGRTGRLL Trigger: TAACAACCTTCCCGTTCTGCCCGCGTCCTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCACTCCATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | TTCCTGAGCTCGGCGAAGCTCTTCGGGATGGAGTGGAGGAGGTTGTaGGATAAATCGAGCACCGACAGTTGGCTACACTGGCACAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: FLSSAKLFGMEWRRL*DKSSTDSWLHWHKD Trigger: GTCCTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | TCAAGGTTCTTCAGTGCACAGATCTGCAGCGGGCAGTGGTGCAGATaGTTCTGGCTTAGGTCCAGGAAGCGCAAGTTGACCAGGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: SRFFSAQICSGQWCR*FWLRSRKRKLTRHL Trigger: CAGGTGCCTGGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCACCACTGCCCGCTGCAGATCTGTGCACTGAAGAACCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS GCA 90 bp | AGGACTTCAAGGTTCTTCAGTGCACAGATCTGCAGCGGGCAGTGGTaGAGATGGTTCTGGCTTAGGTCCAGGAAGCGCAAGTTGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: RTSRFFSAQICSGQW*RWFWLRSRKRKLTR Trigger: CCTGGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCACCACTGCCCGCTGCAGATCTGTGCACTGAAGAACCTTGAAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | TGGAGGAGGTTGTGGGATAAATCGAGCACCGACAGTTGGCTACACTaGCACAAGGACGCGGGCAGAACGGGAAGGTTGTTAGAAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: WRRLWDKSSTDSWLH*HKDAGRTGRLLEAI Trigger: TATGGCTTCTAACAACCTTCCCGTTCTGCCCGCGTCCTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | ATTTCCGTCATCTTCCTGAGCTCGGCGAAGCTCTTCGGGATGGAGTaGAGGAGGTTGTGGGATAAATCGAGCACCGACAGTTGGCTACAC | + |
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Preference number: 5 (lower is better) Translates to: ISVIFLSSAKLFGME*RRLWDKSSTDSWLH Trigger: GTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAAGATGACGGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GCTTCAGGTAGATCTCCCTCAGCTTGGTCTGGTTCACTATTTCCTTaGGCAGACATTTCAGGTGGTTTCCGGTCAGTCCGAGCAGCTCGA | + |
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Preference number: 5 (lower is better) Translates to: ASGRSPSAWSGSLFP*ADISGGFRSVRAAR Trigger: TCGAGCTGCTCGGACTGACCGGAAACCACCTGAAATGTCTGCCCAAGGAAATAGTGAACCAGACCAAGCTGAGGGAGATCTACCTGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GGCAGACATTTCAGGTGGTTTCCGGTCAGTCCGAGCAGCTCGAGATaGTGGAGGTTTTTAAAGATGACGACGGGAATTTCCTTCAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GRHFRWFPVSPSSSR*WRFLKMTTGISFRS Trigger: CGACCTGAAGGAAATTCCCGTCGTCATCTTTAAAAACCTCCACCATCTCGAGCTGCTCGGACTGACCGGAAACCACCTGAAATGTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | AGACATTTCAGGTGGTTTCCGGTCAGTCCGAGCAGCTCGAGATGGTaGAGGTTTTTAAAGATGACGACGGGAATTTCCTTCAGGTCGGTC | + |
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Preference number: 5 (lower is better) Translates to: RHFRWFPVSPSSSRW*RFLKMTTGISFRSV Trigger: GACCGACCTGAAGGAAATTCCCGTCGTCATCTTTAAAAACCTCCACCATCTCGAGCTGCTCGGACTGACCGGAAACCACCTGAAATGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | CTCAGCTTGGTCTGGTTCACTATTTCCTTGGGCAGACATTTCAGGTaGTTTCCGGTCAGTCCGAGCAGCTCGAGATGGTGGAGGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: LSLVWFTISLGRHFR*FPVSPSSSRWWRFL Trigger: TAAAAACCTCCACCATCTCGAGCTGCTCGGACTGACCGGAAACCACCTGAAATGTCTGCCCAAGGAAATAGTGAACCAGACCAAGCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | AGCCATATAGAACTTCTGCAGCCCCGTCAGGTGTCCGATCTCTTCTaGGATGGCACCTATTTTGTTCTCGTCCAGGTCAATGATTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SHIELLQPRQVSDLF*DGTYFVLVQVNDFQ Trigger: CTGGAAATCATTGACCTGGACGAGAACAAAATAGGTGCCATCCCAGAAGAGATCGGACACCTGACGGGGCTGCAGAAGTTCTATATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 90 bp | CCGGGCACAGGCTCCTCAGGTTGTTCTTATCCAGGTAGAGGACCCTaGTGTTCTTTAAACGCTGAATCTCCTGGGGAATTTCTTCAATCT | + |
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Preference number: 5 (lower is better) Translates to: PGTGSSGCSYPGRGP*CSLNAESPGEFLQS Trigger: AGATTGAAGAAATTCCCCAGGAGATTCAGCGTTTAAAGAACATCAGGGTCCTCTACCTGGATAAGAACAACCTGAGGAGCCTGTGCCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS GCA 90 bp | GCTTGTGCTTGGCAAATGGCATCTGGAAGTTGCTTAAGCAAATTGTaGCGGCAATCAAGAACTTCTAGGTTAGGCATTGACCCCAAGGAT | + |
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Preference number: 5 (lower is better) Translates to: ACAWQMASGSCLSKL*RQSRTSRLGIDPKD Trigger: ATCCTTGGGGTCAATGCCTAACCTAGAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCAAGCACAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GGAAAACTTCAAACTGGTTTCGCTTCAGGTAGATCTCCCTCAGCTTaGTCTGGTTCACTATTTCCTTGGGCAGACATTTCAGGTGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GKLQTGFASGRSPSA*SGSLFPWADISGGF Trigger: GAAACCACCTGAAATGTCTGCCCAAGGAAATAGTGAACCAGACCAAGCTGAGGGAGATCTACCTGAAGCGAAACCAGTTTGAAGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GAGGTATTTCCATATGGCCTCATTGCCTTCAGCACACACTTCTTTTaGGGGTTCTTCCATGGGATTGTCCATCAGTGTCAGAACCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: EVFPYGLIAFSTHFF*GFFHGIVHQCQNLK Trigger: CTTAAGGTTCTGACACTGATGGACAATCCCATGGAAGAACCCCCAAAAGAAGTGTGTGCTGAAGGCAATGAGGCCATATGGAAATACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 90 bp | TCTAGGTTAGGCATTGACCCCAAGGATACGGGCAGGTACTCCAGATaGTTGTTCTCTATATATAGCTCTTTGAGACTCTGCAGTTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SRLGIDPKDTGRYSR*LFSIYSSLRLCSFL Trigger: TAGGAAACTGCAGAGTCTCAAAGAGCTATATATAGAGAACAATCATCTGGAGTACCTGCCCGTATCCTTGGGGTCAATGCCTAACCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS GCA 90 bp | CGTAATTCTTTCAAAGCTTGTGCTTGGCAAATGGCATCTGGAAGTTaGTTAAGCAAATTGTGCCGGCAATCAAGAACTTCTAGGTTAGGC | + |
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Preference number: 5 (lower is better) Translates to: RNSFKACAWQMASGS*LSKLCRQSRTSRLG Trigger: GCCTAACCTAGAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCAAGCACAAGCTTTGAAAGAATTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 90 bp | GTCAGAACCTTAAGATTCACTAGGGAATCCAAATTCTCTGGAAGATaGGTGAGCAAGTTGTCCTCCAGCCGTAATTCTTTCAAAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: VRTLRFTRESKFSGR*VSKLSSSRNSFKAC Trigger: ACAAGCTTTGAAAGAATTACGGCTGGAGGACAACTTGCTCACCCATCTTCCAGAGAATTTGGATTCCCTAGTGAATCTTAAGGTTCTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 90 bp | AATTCTGTGAATGTGAAGATCTCCAAAGGAATGGCAGTCAAGCTCTaGTTAGAGGCATCAATGAAAAATGTTCTATCATTGACGTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: NSVNVKISKGMAVKL*LEASMKNVLSLTCC Trigger: ACAGCACGTCAATGATAGAACATTTTTCATTGATGCCTCTAATCAGAGCTTGACTGCCATTCCTTTGGAGATCTTCACATTCACAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | GAGCAGGTGCAGCGAGGTCCACCTGCAAATGAGGCGTaGCACCTTCTCCAGGCGGTTCCCGCTCAGCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: EQVQRGPPANEA*HLLQAVPAQPD Trigger: ATCGGGCTGAGCGGGAACCGCCTGGAGAAGGTGCCACGCCTCATTTGCAGGTGGACCTCGCTGCACCTGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | GGGCAGTGGTGCAGATGGTTCTGGCTTAGGTCCAGGAAGCGCAAGTaGACCAGGCACCTGAAGGAGCCCCGCAGCCTGTGCAGGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GQWCRWFWLRSRKRK*TRHLKEPRSLCRPV Trigger: CACCGGCCTGCACAGGCTGCGGGGCTCCTTCAGGTGCCTGGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCACCACTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | CCAGGTAGAGCAGGTGCAGCGAGGTCCACCTGCAAATaGGGCGTGGCACCTTCTCCAGGCGGTTCCCGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGRAGAARSTCK*GVAPSPGGSRS Trigger: TGAGCGGGAACCGCCTGGAGAAGGTGCCACGCCTCATTTGCAGGTGGACCTCGCTGCACCTGCTCTACCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | GGCGGTTCCCGCTCAGCCCGATTTCCGTCATCTTCCTaGGCTCGGCGAAGCTCTTCGGGATGGAGTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GGSRSARFPSSS*ARRSSSGWSGG Trigger: TCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAAGATGACGGAAATCGGGCTGAGCGGGAACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | TGCAGATGGTTCTGGCTTAGGTCCAGGAAGCGCAAGTaGACCAGGCACCTGAAGGAGCCCCGCAGCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: CRWFWLRSRKRK*TRHLKEPRSLC Trigger: GCACAGGCTGCGGGGCTCCTTCAGGTGCCTGGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | TGGAGGAGGTTGTGGGATAAATCGAGCACCGACAGTTaGCTACACTGGCACAAGGACGCGGGCAGAACGGGA | + |
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Preference number: 6 (lower is better) Translates to: WRRLWDKSSTDS*LHWHKDAGRTG Trigger: TCCCGTTCTGCCCGCGTCCTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS GCA 72 bp | AGGTTCTTCAGTGCACAGATCTGCAGCGGGCAGTGGTaGAGATGGTTCTGGCTTAGGTCCAGGAAGCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RFFSAQICSGQW*RWFWLRSRKRK Trigger: CTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCACCACTGCCCGCTGCAGATCTGTGCACTGAAGAACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | TTCAGTGCACAGATCTGCAGCGGGCAGTGGTGCAGATaGTTCTGGCTTAGGTCCAGGAAGCGCAAGTTGACC | + |
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Preference number: 6 (lower is better) Translates to: FSAQICSGQWCR*FWLRSRKRKLT Trigger: GGTCAACTTGCGCTTCCTGGACCTAAGCCAGAACCATCTGCACCACTGCCCGCTGCAGATCTGTGCACTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | ATCTTCCTGAGCTCGGCGAAGCTCTTCGGGATGGAGTGGAGGAGGTaGTGGGATAAATCGAGCACCGACAGTTGGCTACACTGGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: IFLSSAKLFGMEWRR*WDKSSTDSWLHWHK Trigger: CTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | ATCTTCCTGAGCTCGGCGAAGCTCTTCGGGATGGAGTaGAGGAGGTTGTGGGATAAATCGAGCACCGACAGT | + |
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Preference number: 6 (lower is better) Translates to: IFLSSAKLFGME*RRLWDKSSTDS Trigger: ACTGTCGGTGCTCGATTTATCCCACAACCTCCTCCACTCCATCCCGAAGAGCTTCGCCGAGCTCAGGAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | GTCTGGTTCACTATTTCCTTGGGCAGACATTTCAGGTaGTTTCCGGTCAGTCCGAGCAGCTCGAGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VWFTISLGRHFR*FPVSPSSSRWW Trigger: CCACCATCTCGAGCTGCTCGGACTGACCGGAAACCACCTGAAATGTCTGCCCAAGGAAATAGTGAACCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | TTGTGGGATAAATCGAGCACCGACAGTTGGCTACACTaGCACAAGGACGCGGGCAGAACGGGAAGGTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LWDKSSTDSWLH*HKDAGRTGRLL Trigger: TAACAACCTTCCCGTTCTGCCCGCGTCCTTGTGCCAGTGTAGCCAACTGTCGGTGCTCGATTTATCCCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | GAACTTCTGCAGCCCCGTCAGGTGTCCGATCTCTTCTaGGATGGCACCTATTTTGTTCTCGTCCAGGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: ELLQPRQVSDLF*DGTYFVLVQVN Trigger: ATTGACCTGGACGAGAACAAAATAGGTGCCATCCCAGAAGAGATCGGACACCTGACGGGGCTGCAGAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | CTGGGATGGCACCTATTTTGTTCTCGTCCAGGTCAATaGTTTCCAGGGTGTAGAGAACACAGAGCTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGWHLFCSRPGQ*FPGCREHRAPG Trigger: CCCAGGAGCTCTGTGTTCTCTACACCCTGGAAATCATTGACCTGGACGAGAACAAAATAGGTGCCATCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | AGGTGGTTTCCGGTCAGTCCGAGCAGCTCGAGATGGTaGAGGTTTTTAAAGATGACGACGGGAATTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: RWFPVSPSSSRW*RFLKMTTGISF Trigger: GAAGGAAATTCCCGTCGTCATCTTTAAAAACCTCCACCATCTCGAGCTGCTCGGACTGACCGGAAACCACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | AGATCTCCCTCAGCTTGGTCTGGTTCACTATTTCCTTaGGCAGACATTTCAGGTGGTTTCCGGTCAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: RSPSAWSGSLFP*ADISGGFRSVR Trigger: TCGGACTGACCGGAAACCACCTGAAATGTCTGCCCAAGGAAATAGTGAACCAGACCAAGCTGAGGGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | TCCATATGGCCTCATTGCCTTCAGCACACACTTCTTTaGGGGGTTCTTCCATGGGATTGTCCATCAGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SIWPHCLQHTLL*GVLPWDCPSVS Trigger: TGACACTGATGGACAATCCCATGGAAGAACCCCCAAAAGAAGTGTGTGCTGAAGGCAATGAGGCCATATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | GGCTCCTCAGGTTGTTCTTATCCAGGTAGAGGACCCTaGTGTTCTTTAAACGCTGAATCTCCTGGGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GSSGCSYPGRGP*CSLNAESPGEF Trigger: AAATTCCCCAGGAGATTCAGCGTTTAAAGAACATCAGGGTCCTCTACCTGGATAAGAACAACCTGAGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | GGCATTGACCCCAAGGATACGGGCAGGTACTCCAGATaGTTGTTCTCTATATATAGCTCTTTGAGACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GIDPKDTGRYSR*LFSIYSSLRLC Trigger: GCAGAGTCTCAAAGAGCTATATATAGAGAACAATCATCTGGAGTACCTGCCCGTATCCTTGGGGTCAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CCA 72 bp | CAAACTGGTTTCGCTTCAGGTAGATCTCCCTCAGCTTaGTCTGGTTCACTATTTCCTTGGGCAGACATTTCA | + |
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Preference number: 6 (lower is better) Translates to: QTGFASGRSPSA*SGSLFPWADIS Trigger: TGAAATGTCTGCCCAAGGAAATAGTGAACCAGACCAAGCTGAGGGAGATCTACCTGAAGCGAAACCAGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | AAAGCTTGTGCTTGGCAAATGGCATCTGGAAGTTGCTTAAGCAAATaGTGCCGGCAATCAAGAACTTCTAGGTTAGGCATTGACCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KACAWQMASGSCLSK*CRQSRTSRLGIDPK Trigger: CTTGGGGTCAATGCCTAACCTAGAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCAAGCACAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | AGGGAATCCAAATTCTCTGGAAGATGGGTGAGCAAGTaGTCCTCCAGCCGTAATTCTTTCAAAGCTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: RESKFSGRWVSK*SSSRNSFKACA Trigger: AGCACAAGCTTTGAAAGAATTACGGCTGGAGGACAACTTGCTCACCCATCTTCCAGAGAATTTGGATTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | TCAGCACACACTTCTTTTGGGGGTTCTTCCATGGGATaGTCCATCAGTGTCAGAACCTTAAGATTCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: SAHTSFGGSSMG*SISVRTLRFTR Trigger: CCTAGTGAATCTTAAGGTTCTGACACTGATGGACAATCCCATGGAAGAACCCCCAAAAGAAGTGTGTGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | AGATTCACTAGGGAATCCAAATTCTCTGGAAGATGGGTGAGCAAGTaGTCCTCCAGCCGTAATTCTTTCAAAGCTTGTGCTTGGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: RFTRESKFSGRWVSK*SSSRNSFKACAWQM Trigger: CATTTGCCAAGCACAAGCTTTGAAAGAATTACGGCTGGAGGACAACTTGCTCACCCATCTTCCAGAGAATTTGGATTCCCTAGTGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | TCATTGCCTTCAGCACACACTTCTTTTGGGGGTTCTTCCATGGGATaGTCCATCAGTGTCAGAACCTTAAGATTCACTAGGGAATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLPSAHTSFGGSSMG*SISVRTLRFTRESK Trigger: TTTGGATTCCCTAGTGAATCTTAAGGTTCTGACACTGATGGACAATCCCATGGAAGAACCCCCAAAAGAAGTGTGTGCTGAAGGCAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | GATTCACTAGGGAATCCAAATTCTCTGGAAGATGGGTaGGCAAGTTGTCCTCCAGCCGTAATTCTTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DSLGNPNSLEDG*ASCPPAVILSK Trigger: CTTTGAAAGAATTACGGCTGGAGGACAACTTGCTCACCCATCTTCCAGAGAATTTGGATTCCCTAGTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS GCA 72 bp | TGGCAAATGGCATCTGGAAGTTGCTTAAGCAAATTGTaGCGGCAATCAAGAACTTCTAGGTTAGGCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: WQMASGSCLSKL*RQSRTSRLGID Trigger: GTCAATGCCTAACCTAGAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | GCTTGGCAAATGGCATCTGGAAGTTGCTTAAGCAAATaGTGCCGGCAATCAAGAACTTCTAGGTTAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: AWQMASGSCLSK*CRQSRTSRLGI Trigger: AATGCCTAACCTAGAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 72 bp | TTTCAAAGCTTGTGCTTGGCAAATGGCATCTGGAAGTaGCTTAAGCAAATTGTGCCGGCAATCAAGAACTTC | + |
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Preference number: 6 (lower is better) Translates to: FQSLCLANGIWK*LKQIVPAIKNF Trigger: GAAGTTCTTGATTGCCGGCACAATTTGCTTAAGCAACTTCCAGATGCCATTTGCCAAGCACAAGCTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS TCA 72 bp | AATGTGAAGATCTCCAAAGGAATGGCAGTCAAGCTCTaGTTAGAGGCATCAATGAAAAATGTTCTATCATTG | + |
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Preference number: 6 (lower is better) Translates to: NVKISKGMAVKL*LEASMKNVLSL Trigger: CAATGATAGAACATTTTTCATTGATGCCTCTAATCAGAGCTTGACTGCCATTCCTTTGGAGATCTTCACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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| CDS CAA 90 bp | GAAAGGAAAGGAACTCATTTCCTGTTAGTCCAAGTATCTTCAGTTTaGAAAGTGAGCCCAATTCTGAAGGTAACTGTCCTATTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: ERKGTHFLLVQVSSV*KVSPILKVTVLFYC Trigger: ACAATAAAATAGGACAGTTACCTTCAGAATTGGGCTCACTTTCAAAACTGAAGATACTTGGACTAACAGGAAATGAGTTCCTTTCCTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000340806.6 |
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