RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRFIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124831

Ensembl transcript IDs: ENST00000244815.9, ENST00000289175.10, ENST00000308482.14, ENST00000392000.4, ENST00000420665.5, ENST00000464608.5, ENST00000465870.5, ENST00000468950.5, ENST00000473815.1, ENST00000474195.1, ENST00000478958.5, ENST00000483443.1, ENST00000489603.5

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGTTCATACGGTGCCCGGGTGTGCAGTGTGGGTCTCCCAGTGGTaGCCACCTGCCAGCACATTTTGCTCACCTGTCCGACCCGTGGTT +
Preference number: 1 (lower is better)
Translates to: PVHTVPGCAVWVSQW*PPASTFCSPVRPVV
Trigger: AACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 90 bp CTGAGGGGCTTCGTCCAGCTTCCTTCCTCTTTCCTGTTCATACGGTaGCCGGGTGTGCAGTGTGGGTCTCCCAGTGGTGCCCACCTGCCA +
Preference number: 1 (lower is better)
Translates to: LRGFVQLPSSFLFIR*PGVQCGSPSGAHLP
Trigger: TGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAAGAGGAAGGAAGCTGGACGAAGCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 90 bp TACGGTGCCCGGGTGTGCAGTGTGGGTCTCCCAGTGGTGCCCACCTaGCAGCACATTTTGCTCACCTGTCCGACCCGTGGTTTCCTACTT +
Preference number: 1 (lower is better)
Translates to: YGARVCSVGLPVVPT*QHILLTCPTRGFLL
Trigger: AAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 90 bp TTTCCTGTTCATACGGTGCCCGGGTGTGCAGTGTGGGTCTCCCAGTaGTGCCCACCTGCCAGCACATTTTGCTCACCTGTCCGACCCGTG +
Preference number: 1 (lower is better)
Translates to: FPVHTVPGCAVWVSQ*CPPASTFCSPVRPV
Trigger: CACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 90 bp TGTGCAGTGTGGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTTaGTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCC +
Preference number: 1 (lower is better)
Translates to: CAVWVSQWCPPASTF*SPVRPVVSYLPVLA
Trigger: GGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 90 bp ATCTCCCTTTTGCCGGTGGGCCCAGCATGGTCAGCACAGGGTCCCTaGGGGGCTTCGTCCAGCTTCCTTCCTCTTTCCTGTTCATACGGT +
Preference number: 1 (lower is better)
Translates to: ISLLPVGPAWSAQGP*GASSSFLPLSCSYG
Trigger: ACCGTATGAACAGGAAAGAGGAAGGAAGCTGGACGAAGCCCCTCAGGGACCCTGTGCTGACCATGCTGGGCCCACCGGCAAAAGGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 90 bp TCGTCCAGCTTCCTTCCTCTTTCCTGTTCATACGGTGCCCGGGTGTaGAGTGTGGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTTG +
Preference number: 1 (lower is better)
Translates to: SSSFLPLSCSYGARV*SVGLPVVPTCQHIL
Trigger: CAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAAGAGGAAGGAAGCTGGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 90 bp GCTTCCTTCCTCTTTCCTGTTCATACGGTGCCCGGGTGTGCAGTGTaGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTTGCTCACCT +
Preference number: 1 (lower is better)
Translates to: ASFLFPVHTVPGCAV*VSQWCPPASTFCSP
Trigger: AGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAAGAGGAAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 90 bp GGGAAAACGCCATCTTCTCAGGGCTGTGAGACACCTGGGAATCGATaGCTTGCAGCCCTGTTCTACCAGCTGGGAGACTTCTGCCAGTTC +
Preference number: 1 (lower is better)
Translates to: GKTPSSQGCETPGNR*LAALFYQLGDFCQF
Trigger: GAACTGGCAGAAGTCTCCCAGCTGGTAGAACAGGGCTGCAAGGCATCGATTCCCAGGTGTCTCACAGCCCTGAGAAGATGGCGTTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 90 bp TTCCTCAGAGCCACTGATAGGGAAAACGCCATCTTCTCAGGGCTGTaGGACACCTGGGAATCGATGCCTTGCAGCCCTGTTCTACCAGCT +
Preference number: 1 (lower is better)
Translates to: FLRATDRENAIFSGL*DTWESMPCSPVLPA
Trigger: AGCTGGTAGAACAGGGCTGCAAGGCATCGATTCCCAGGTGTCTCACAGCCCTGAGAAGATGGCGTTTTCCCTATCAGTGGCTCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 90 bp GCAGGGGAAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATaGAACAATGCTCTCCAGTCACCAACCAGTTGCCTGATCAGAGCT +
Preference number: 1 (lower is better)
Translates to: AGEEAALPDRTEKSL*NNALQSPTSCLIRA
Trigger: AGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTTCCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 90 bp GGATGGACACTGGTGACCCCTAGCATTATGCTGGGAGTGTTTTCTTaGTTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCA +
Preference number: 1 (lower is better)
Translates to: GWTLVTPSIMLGVFS*LYTLNSQPSLQHSP
Trigger: TGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAAAACACTCCCAGCATAATGCTAGGGGTCACCAGTGTCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCTACAGTTCTGGGGGATaGACACTGGTGACCCCTAGC +
Preference number: 2 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPYSSGG*TLVTPS
Trigger: GCTAGGGGTCACCAGTGTCCATCCCCCAGAACTGTA...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 90 bp GTGTGCAGTGTGGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTaGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGC +
Preference number: 2 (lower is better)
Translates to: VCSVGLPVVPTCQHI*LTCPTRGFLLASVG
Trigger: GCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCAAGCCTATGAAACAATaGTCTCCAGTCACCAACCAG +
Preference number: 2 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPKPMKQ*SPVTNQ
Trigger: CTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTT...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR GCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTACGGTGCCCGGGTGTaGAGTGTGGGTCTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: SEKYLKASACCRPCLRDVYGARV*SVGLPV
Trigger: CACTGGGAGACCCACACTGCACACCCGGGCACCGTA...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 90 bp CCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTaGTCTGCTTCCCAATGGGCAGTGGCAAATATCCTCTGCACAAGG +
Preference number: 2 (lower is better)
Translates to: PWFPTCQCWPPAPYN*SASQWAVANILCTR
Trigger: CCTTGTGCAGAGGATATTTGCCACTGCCCATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 90 bp AAACGCCATCTTCTCAGGGCTGTGAGACACCTGGGAATCGATGCCTaGCAGCCCTGTTCTACCAGCTGGGAGACTTCTGCCAGTTCACCT +
Preference number: 2 (lower is better)
Translates to: KRHLLRAVRHLGIDA*QPCSTSWETSASSP
Trigger: AGGTGAACTGGCAGAAGTCTCCCAGCTGGTAGAACAGGGCTGCAAGGCATCGATTCCCAGGTGTCTCACAGCCCTGAGAAGATGGCGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR GCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGCCTGCCAGCACATTTTaGTCACCTGTCCGACCCGTG +
Preference number: 2 (lower is better)
Translates to: SEKYLKASACCRPCLRDVPASTF*SPVRPV
Trigger: CACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGG...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTGCTGCTGGGGCTCCCTaGGGTGAGCCATGGCACGGG +
Preference number: 2 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCAAGAP*GEPWHG
Trigger: CCCGTGCCATGGCTCACCCCAGGGAGCCCCAGCAGC...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 90 bp AAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTGAGTGTTaGCTGCTGGTGTTATTCACGCATGACATAGACATTTTCCCAGTT +
Preference number: 2 (lower is better)
Translates to: KRQHAAGRVCVMCEC*LLVLFTHDIDIFPV
Trigger: AACTGGGAAAATGTCTATGTCATGCGTGAATAACACCAGCAGCAAACACTCACACATCACGCAGACACGGCCGGCAGCATGCTGACGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTTGTCTGCTTCCCAATaGGCAGTGGCAAATATCCTC +
Preference number: 2 (lower is better)
Translates to: SEKYLKASACCRPCLRDVLSASQ*AVANIL
Trigger: GAGGATATTTGCCACTGCCCATTGGGAAGCAGACAA...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR TCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGACAGAGAAAAGCCTATaGAACAATGCTCTCCAGTCA +
Preference number: 2 (lower is better)
Translates to: SEKYLKASACCRPCLRDVTEKSL*NNALQS
Trigger: TGACTGGAGAGCATTGTTTCATAGGCTTTTCTCTGT...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR TCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATAGCTGTCATTTTCAGTaGAGCTATTGCCTAATTACC +
Preference number: 2 (lower is better)
Translates to: FLLASVGPQPPITCLLPNSCHFQ*SYCLIT
Trigger: GGTAATTAGGCAATAGCTTCACTGAAAATGACAGCT...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTTTTACTTCTAGACTaGCCCCTTGTTTCCAGTGAA +
Preference number: 2 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLLLLD*PLVSSE
Trigger: TTCACTGGAAACAAGGGGGCAGTCTAGAAGTAAAAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR TCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTACTAAGAGATACTACTaGAGTCGCTCAAATTGTAGA +
Preference number: 2 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLTKRYY*SRSNCR
Trigger: TCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGT...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR TCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTTAGAACCACATTGCTaGAGTCTCTCAACATTTCAT +
Preference number: 2 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLLEPHC*SLSTFH
Trigger: ATGAAATGTTGAGAGACTTCAGCAATGTGGTTCTAA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 72 bp TTGCCGGTGGGCCCAGCATGGTCAGCACAGGGTCCCTaGGGGGCTTCGTCCAGCTTCCTTCCTCTTTCCTGT +
Preference number: 3 (lower is better)
Translates to: LPVGPAWSAQGP*GASSSFLPLSC
Trigger: ACAGGAAAGAGGAAGGAAGCTGGACGAAGCCCCTCAGGGACCCTGTGCTGACCATGCTGGGCCCACCGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp CACCTGCCAGCACATTTTGCTCACCTGTCCGACCCGTaGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: HLPAHFAHLSDP*FPTCQCWPPAP
Trigger: GGGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp CATACGGTGCCCGGGTGTGCAGTGTGGGTCTCCCAGTaGTGCCCACCTGCCAGCACATTTTGCTCACCTGTC +
Preference number: 3 (lower is better)
Translates to: HTVPGCAVWVSQ*CPPASTFCSPV
Trigger: GACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 72 bp TTCCTTCCTCTTTCCTGTTCATACGGTGCCCGGGTGTaGAGTGTGGGTCTCCCAGTGGTGCCCACCTGCCAG +
Preference number: 3 (lower is better)
Translates to: FLPLSCSYGARV*SVGLPVVPTCQ
Trigger: CTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAAGAGGAAGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR GCA 72 bp TGGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTTaGTCACCTGTCCGACCCGTGGTTTCCTACTTGCCA +
Preference number: 3 (lower is better)
Translates to: WVSQWCPPASTF*SPVRPVVSYLP
Trigger: TGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp CTCTTTCCTGTTCATACGGTGCCCGGGTGTGCAGTGTaGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTT +
Preference number: 3 (lower is better)
Translates to: LFPVHTVPGCAV*VSQWCPPASTF
Trigger: AAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCACACTGCACACCCGGGCACCGTATGAACAGGAAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp CACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTaGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAA +
Preference number: 3 (lower is better)
Translates to: HLSDPWFPTCQC*PPAPYNLSASQ
Trigger: TTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 72 bp GCCACTGATAGGGAAAACGCCATCTTCTCAGGGCTGTaGGACACCTGGGAATCGATGCCTTGCAGCCCTGTT +
Preference number: 3 (lower is better)
Translates to: ATDRENAIFSGL*DTWESMPCSPV
Trigger: AACAGGGCTGCAAGGCATCGATTCCCAGGTGTCTCACAGCCCTGAGAAGATGGCGTTTTCCCTATCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CAA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGACCTGCCAGCACATTTaGCTCACCTGTCCGACCCGT +
Preference number: 3 (lower is better)
Translates to: SEKYLKASACCRPCLRDVTCQHI*LTCPTR
Trigger: ACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGT...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp TGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATaGGCAGTGGCAAATATCCTCTGCACAAGGAGATAC +
Preference number: 3 (lower is better)
Translates to: WPPAPYNLSASQ*AVANILCTRRY
Trigger: GTATCTCCTTGTGCAGAGGATATTTGCCACTGCCCATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 72 bp GAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATaGAACAATGCTCTCCAGTCACCAACCAGTTGCCTG +
Preference number: 3 (lower is better)
Translates to: EAALPDRTEKSL*NNALQSPTSCL
Trigger: CAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp GCTGTGTATATCCTAGATCCATACAGTTCTGGGGGATaGACACTGGTGACCCCTAGCATTATGCTGGGAGTG +
Preference number: 3 (lower is better)
Translates to: AVYILDPYSSGG*TLVTPSIMLGV
Trigger: CACTCCCAGCATAATGCTAGGGGTCACCAGTGTCCATCCCCCAGAACTGTATGGATCTAGGATATACACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CAA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTTGCTTGGTAATGGCTaGTGGTTCCACAGTGTTTTG +
Preference number: 3 (lower is better)
Translates to: SEKYLKASACCRPCLRDVLLGNG*WFHSVL
Trigger: CAAAACACTGTGGAACCACAAGCCATTACCAAGCAA...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CAA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTCCAGTGAAAGAGTTTaGCTTGGTAATGGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SEKYLKASACCRPCLRDVSSERV*LGNGLW
Trigger: CCACAAGCCATTACCAAGCAAAACTCTTTCACTGGA...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR TCA 72 bp CTGGTGACCCCTAGCATTATGCTGGGAGTGTTTTCTTaGTTATATACCCTGAACTCACAACCCTCACTCCAG +
Preference number: 3 (lower is better)
Translates to: LVTPSIMLGVFS*LYTLNSQPSLQ
Trigger: CTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAAAACACTCCCAGCATAATGCTAGGGGTCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATCCAGTCACCAACCAGTaGCCTGATCAGAGCTGGAAT +
Preference number: 3 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNPVTNQ*PDQSWN
Trigger: ATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGG...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CCA 72 bp CTCAGTTTCCACTTGCTAACGTCCCGAAAAGCTGACTaGCTTCACCAGCCATACTTGAAATACAACATATAT +
Preference number: 3 (lower is better)
Translates to: LSFHLLTSRKAD*LHQPYLKYNIY
Trigger: ATATATGTTGTATTTCAAGTATGGCTGGTGAAGCCAGTCAGCTTTTCGGGACGTTAGCAAGTGGAAACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR-3UTR CAA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTTTGTCCTTGATGATATaGCCATCGTCTCTACTGTTA +
Preference number: 3 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLSLMI*PSSLLL
Trigger: TAACAGTAGAGACGATGGCAATATCATCAAGGACAA...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCGTCGTCCTCCGCCGTaGGCCGCTCCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPRRPPP*AAPGWG
Trigger: TCCCCAACCGGGAGCGGCTCACGGCGGAGGACGACG...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCCCGCGCGATCTGGTTaGGCGCGTCGTCCTCCGCCG +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPPARSG*ARRPPP
Trigger: CGGCGGAGGACGACGCGCTCAACCAGATCGCGCGGG...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
69% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCGGGAGCCGGAGGTGCTaGCCCGTCGGGTCCCACCGA +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPGSRRC*PVGSHR
Trigger: TCGGTGGGACCCGACGGGGCAGCACCTCCGGCTCCC...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCACGGGAGCCGGAGGTaGTGCCCCGTCGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPHGSRR*CPVGSH
Trigger: GTGGGACCCGACGGGGCAGCACCTCCGGCTCCCGTG...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATGGGGCTCCCTGGGGTaGGCCATGGCACGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGWGSLG*AMAREP
Trigger: GGGCTCCCGTGCCATGGCTCACCCCAGGGAGCCCCA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCGCCTCCCGCGCGATCTaGTTGAGCGCGTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPASRAI*LSASSS
Trigger: GGAGGACGACGCGCTCAACCAGATCGCGCGGGAGGC...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTAAAAGCGTCAGCATaGTGCCGGCCGTGTCTGCGT +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPLKASA*CRPCLR
Trigger: ACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAG...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATTGCGCCCCGATCCCTaGGTGCCCATGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGLRPDP*VPMSID
Trigger: GTCGATGGACATGGGCACCCAGGGATCGGGGCGCAA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGAGAGCTGGAGTTGAGGTaGCCGCTGTACTCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGELELR*PLYSEG
Trigger: TCCCTCGGAGTACAGCGGCCACCTCAACTCCAGCTC...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 72 bp GTGGGTCTCCCAGTGGTGCCCACCTGCCAGCACATTTaGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCC +
Preference number: 4 (lower is better)
Translates to: VGLPVVPTCQHI*LTCPTRGFLLA
Trigger: GGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCTCACTAAGTGGCCGTTaGTCACCTCGAGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPSLSGR*SPRALL
Trigger: CAGAAGAGCTCGAGGTGAGCAACGGCCACTTAGTGA...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATGGGTCTCCCAGTGGTaGCCACCTGCCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGWVSQW*PPASTF
Trigger: AAATGTGCTGGCAGGTGGGCACCACTGGGAGACCCA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATACAGTTCTGGGGGATaGACACTGGTGACCCCTAGC +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGYSSGG*TLVTPS
Trigger: GCTAGGGGTCACCAGTGTCCATCCCCCAGAACTGTA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCGGTTGGGGAGCCGCTTaGGCCCCGATCCCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSGWGAA*APIPGC
Trigger: GCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACC...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCAGAGCTGGAATTTACTaGTGGGACAAGAGTGCACTC +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPRAGIY*WDKSAL
Trigger: GAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCT...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCGCTGCTGGGGCTCCCTaGGGTGAGCCATGGCACGGG +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSAAGAP*GEPWHG
Trigger: CCCGTGCCATGGCTCACCCCAGGGAGCCCCAGCAGC...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCCGCGGGAGCTGGAGTTaGGGTGGCCGCTGTACTCCG +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSRGSWS*GGRCTP
Trigger: CGGAGTACAGCGGCCACCTCAACTCCAGCTCCCGCG...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGAGACTACCCACTGACATaGGCTCGTCTTCATCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGDYPLT*ARLHQK
Trigger: CTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTC...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGAGAGCGGAGCTCTCTTTaGAGTTTCCGTTTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGERSSL*SFRFSA
Trigger: GGCAGAAAAACGGAAACTCCAAAGAGAGCTCCGCTC...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGGTGTGGGTCTCCCAGTaGTGCCCACCTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SEKYLKASACCRPCLRDVVWVSQ*CPPAST
Trigger: TGTGCTGGCAGGTGGGCACCACTGGGAGACCCACAC...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCCCCGGGTGTGCAGTGTaGGTCTCCCAGTGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSPGCAV*VSQWCP
Trigger: TGGGCACCACTGGGAGACCCACACTGCACACCCGGG...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATGCCAGTTCACCTTCCTaGACCCTGGGTCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNASSPS*TLGPSS
Trigger: AGATGAGGGACCCAGGGTCCAGGAAGGTGAACTGGC...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 72 bp CCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTaGTCTGCTTCCCAATGGGCAGTGGCAAATATCCTC +
Preference number: 4 (lower is better)
Translates to: PTCQCWPPAPYN*SASQWAVANIL
Trigger: GAGGATATTTGCCACTGCCCATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCAGCTGTCATTTTCAGTaGAGCTATTGCCTAATTACC +
Preference number: 4 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPSCHFQ*SYCLIT
Trigger: GGTAATTAGGCAATAGCTTCACTGAAAATGACAGCT...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGACTTGATTATATACCCTaGACTCACAACCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGLDYIP*THNPHS
Trigger: GGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAG...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTTCTACCACAGGGCTaGCCCGGGCCGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLLPQG*PGPSWP
Trigger: GGGCCAGCTCGGCCCGGGCCAGCCCTGTGGTAGAAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGCCTACTTGCCAGTGTTaGCCCCCAGCCCCCTATAAC +
Preference number: 4 (lower is better)
Translates to: SEKYLKASACCRPCLRDVPTCQC*PPAPYN
Trigger: GTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGG...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATCACCTGTCCGACCCGTaGTTTCCTACTTGCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNHLSDP*FPTCQC
Trigger: ACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTG...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGTCCACGACTACCCACTaGCATGCGCTCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SEKYLKASACCRPCLRDVSTTTH*HALVFI
Trigger: GATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGA...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATTGCCTTCTACATCCTaGATCTGGTCCTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGLPSTS*IWSFNS
Trigger: TGAGTTAAAGGACCAGATTCAGGATGTAGAAGGCAA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTAGTACCTGCAGGTTCTaGGCGTCGGCGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCSTCRF*ASAPAR
Trigger: CCGGGCTGGCGCCGACGCTCAGAACCTGCAGGTACT...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATTCTGTTTTATCCAATaGAGAGCGGAGCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGFCFIQ*RAELSL
Trigger: CAAAGAGAGCTCCGCTCTGCATTGGATAAAACAGAA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATTGGGAATCGATGCCTTaGAGCCCTGTTCTACCAGCT +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNWESMP*SPVLPA
Trigger: AGCTGGTAGAACAGGGCTGCAAGGCATCGATTCCCA...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCGGGTCCCACCGAAGCTaGCTTCATCCAACACAGACG +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSGSHRS*LHPTQT
Trigger: CGTCTGTGTTGGATGAAGGCAGCTTCGGTGGGACCC...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTCAGCACAGGGTCCCTaGGGGGCTTCGTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLSAQGP*GASSSF
Trigger: GAAGCTGGACGAAGCCCCTCAGGGACCCTGTGCTGA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATGCCCCGATCCCTGGGTaGCCATGTCCATCGACCGCG +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNAPIPG*PCPSTA
Trigger: CGCGGTCGATGGACATGGGCACCCAGGGATCGGGGC...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
3UTR CAA 72 bp CATGCTGCCGGCCGTGTCTGCGTGATGTGTGAGTGTTaGCTGCTGGTGTTATTCACGCATGACATAGACATT +
Preference number: 4 (lower is better)
Translates to: HAAGRVCVMCEC*LLVLFTHDIDI
Trigger: AATGTCTATGTCATGCGTGAATAACACCAGCAGCAAACACTCACACATCACGCAGACACGGCCGGCAGCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATACAGAGAAAAGCCTATaGAACAATGCTCTCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNTEKSL*NNALQS
Trigger: TGACTGGAGAGCATTGTTTCATAGGCTTTTCTCTGT...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATTCAAAGAACTCTTTCTaGCTCTCTAATGCCCCTATC +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNSKNSF*LSNAPI
Trigger: GATAGGGGCATTAGAGAGGCAGAAAGAGTTCTTTGA...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTGCGGCATTCAGAGGCTaGTGTGCGGTCAGACACAGA +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCAAFRG*CAVRHR
Trigger: TCTGTGTCTGACCGCACAGCAGCCTCTGAATGCCGC...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCCAGTGGTGCCCACCTaGCAGCACATTTTGCTCACC +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCPVVPT*QHILLT
Trigger: GGTGAGCAAAATGTGCTGGCAGGTGGGCACCACTGG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTTCCTGTTCATACGGTaGCCGGGTGTGCAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLFLFIR*PGVQCG
Trigger: CCCACACTGCACACCCGGGCACCGTATGAACAGGAA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCTCTCCCTTTTGCCGGTaGGCCCAGCATGGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSASPFCR*AQHGQH
Trigger: GTGCTGACCATGCTGGGCCCACCGGCAAAAGGGAGA...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AGTGAAAAATACCTAAAAGCGTCAGCATGCTGCCGGCCGTGTCTGCGTGATGTGGTGAGTGTTTGCTGCTaGTGTTATTCACGCATGACA +
Preference number: 4 (lower is better)
Translates to: SEKYLKASACCRPCLRDVVSVCC*CYSRMT
Trigger: TGTCATGCGTGAATAACACCAGCAGCAAACACTCAC...CACATCACGCAGACACGGCCGGCAGCATGCTGACGCTTTTAGGTATTTTTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCCACCAACCAGTTGCCTaGTCAGAGCTGGAATTTACT +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSHQPVA*SELEFT
Trigger: AGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTG...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCGGGGATGGACACTGGTaGCCCCTAGCATTATGCTGG +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAGDGHW*PLALCW
Trigger: CCAGCATAATGCTAGGGGTCACCAGTGTCCATCCCC...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATCCGGCCGTGTCTGCGTaGTGTGTGAGTGTTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNPAVSA*CVSVCC
Trigger: GCAGCAAACACTCACACATCACGCAGACACGGCCGG...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTACTCCAAGTCAGGCTaGGACCTCAGGCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLYSKSG*DLRLPR
Trigger: TCGTGGAAGCCTGAGGTCGCAGCCTGACTTGGAGTA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATCCGTGGTTTCCTACTTaGCAGTGTTGGCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNPWFPT*QCWPPA
Trigger: GGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGG...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCCCTGCCAGCACATTTTaGTCACCTGTCCGACCCGTG +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAPASTF*SPVRPV
Trigger: CACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGG...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCGCTGCCGGCCGTGTCTaGGTGATGTGTGAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAAAGRV*VMCECL
Trigger: CAAACACTCACACATCACGCAGACACGGCCGGCAGC...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCAAAGCGTCAGCATGCTaGCGGCCGTGTCTGCGTGAT +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAKASAC*RPCLRD
Trigger: ATCACGCAGACACGGCCGGCAGCATGCTGACGCTTT...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCAGCTGGGAGACTTCTaGCAGTTCACCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCQLGDF*QFTFLD
Trigger: GTCCAGGAAGGTGAACTGGCAGAAGTCTCCCAGCTG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCCCGATGTGTTTCTTCTaGATCTACGAGAGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSPMCFF*IYESSA
Trigger: AGCGCTACTCTCGTAGATCCAGAAGAAACACATCGG...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATTTAGAACCACATTGCTaGAGTCTCTCAACATTTCAT +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNLEPHC*SLSTFH
Trigger: ATGAAATGTTGAGAGACTTCAGCAATGTGGTTCTAA...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTAACGTCCCGAAAAGCTaGCTGGCTTCACCAGCCATA +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLNVPKS*LASPAI
Trigger: TATGGCTGGTGAAGCCAGTCAGCTTTTCGGGACGTT...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTACAGACAGGAGGGCCTaGCAGATCTTCTATTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCTDRRA*QIFYSG
Trigger: CCCTGAATAGAAGATCTGGCAGGCCCTCCTGTCTGT...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATATCTCTTTCAATCCCTaGATGTATTTGCCTTCTACA +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNISFNP*MYLPST
Trigger: TGTAGAAGGCAAATACATGCAGGGATTGAAAGAGAT...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATTCAAATTGTAGATTCTaGCATGAAAGGAAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FLLASVGPQPPITCLLPNSNCRF*HERKSQ
Trigger: TTGGGACTTCCTTTCATGGCAGAATCTACAATTTGA...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCTTGCCTGATCAGAGCTaGAATTTACTGCTGGGACAA +
Preference number: 4 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSLPDQS*NLLLGQ
Trigger: TTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAA...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATAGACGCTTCACTAAGTaGCCGTTGCTCACCTCGAGC +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNRRFTK*PLLTSS
Trigger: GCTCGAGGTGAGCAACGGCCACTTAGTGAAGCGTCT...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTGCTGGAATTTACTGCTaGGACAAGAGTGCACTCCGA +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLAGIYC*DKSALR
Trigger: TCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGC...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCTGTCTGCGTGATGTGTaGGTGTTTGCTGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSACLRDV*VFAAGV
Trigger: AACACCAGCAGCAAACACTCACACATCACGCAGACA...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATGGGAGAGGTAGAGACTaGAGGCTTGACTTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNGRGRD*RLDFLR
Trigger: TCTGAGGAAGTCAAGCCTTCAGTCTCTACCTCTCCC...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTGTCTTCCATCCACTaGTCGATGTCACCCCATTTT +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLSSIH*SMSPHF
Trigger: AAAATGGGGTGACATCGAGCAGTGGATGGAAGACAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTCTGCTGGGACAAGAGTaGACTCCGATTTGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLLLGQE*TPICFH
Trigger: ATGAAAGCAAATCGGAGTGCACTCTTGTCCCAGCAG...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCAGTCACCAACCAGTTaGCTGATCAGAGCTGGAATT +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCQSPTS*LIRAGI
Trigger: AATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCAGATCCATACAGTTCTaGGGGATGGACACTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSARSIQF*GMDTGD
Trigger: GTCACCAGTGTCCATCCCCCAGAACTGTATGGATCT...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTTCCCAATGGGCAGTaGCAAATATCCTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLPNGQ*QISSAQ
Trigger: TTGTGCAGAGGATATTTGCCACTGCCCATTGGGAAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTTGTGTGAGTGTTTGCTaGTGGTGTTATTCACGCATG +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCCVSVC*WCYSRM
Trigger: CATGCGTGAATAACACCAGCAGCAAACACTCACACA...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATTCCCGAAAAGCTGACTaGCTTCACCAGCCATACTTG +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNSRKAD*LHQPYL
Trigger: CAAGTATGGCTGGTGAAGCCAGTCAGCTTTTCGGGA...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCTGTAGGTCCATTACATaGATGTCTGTCCCGTTTTCC +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSACRSIT*MSVPFS
Trigger: GGAAAACGGGACAGACATGCATGTAATGGACCTACA...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCAAGCCTATGAAACAATaGTCTCCAGTCACCAACCAG +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAKPMKQ*SPVTNQ
Trigger: CTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTT...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCCACTCTATTGTTTCCTaGAGATCAGAAATCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAHSIVS*RSEISL
Trigger: CAGGGAGATTTCTGATCTTCAGGAAACAATAGAGTG...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTGGGAGTGTTTTCTTaGTTATATACCCTGAACTCA +
Preference number: 4 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLGVFS*LYTLNS
Trigger: TGAGTTCAGGGTATATAATCAAGAAAACACTCCCAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCGGTGTTATTCACGCATaGCATAGACATTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAGVIHA*HRHFPS
Trigger: ACTGGGAAAATGTCTATGTCATGCGTGAATAACACC...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATCTTTTACTTCTAGACTaGCCCCTTGTTTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNLLLLD*PLVSSE
Trigger: TTCACTGGAAACAAGGGGGCAGTCTAGAAGTAAAAG...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR TCA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCACTAAGAGATACTACTaGAGTCGCTCAAATTGTAGA +
Preference number: 4 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSATKRYY*SRSNCR
Trigger: TCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGT...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR GCA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTGAGTTTCCGTTTTTCTaGCTTAAGTTCATCTTCTAT +
Preference number: 4 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLEFPFF*LKFIFY
Trigger: ATAGAAGATGAACTTAAGGCAGAAAAACGGAAACTC...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS CCA 90 bp GCCGTGAGCCGCTCCCGGTTGGGGAGCCGCTTGCGCCCCGATCCCTaGGTGCCCATGTCCATCGACCGCGTCGCCCGCAGCTGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: AVSRSRLGSRLRPDP*VPMSIDRVARSCRG
Trigger: CCCGCGGCAGCTGCGGGCGACGCGGTCGATGGACATGGGCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCGGGAGCGGCTCACGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS-3UTR CAA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGAGCGCGGGAGCTGGAGTaGAGGTGGCCGCTGTACTCC +
Preference number: 5 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGARELE*RWPLYS
Trigger: GGAGTACAGCGGCCACCTCAACTCCAGCTCCCGCGC...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 90 bp CCCCGTCCACCAGGGTGGTTTCTGCAGTGCTGGCACCTTGCTGCCTaGTTCTTCTCCCGCTGCGTGGGGCTGTTCTGTTGGAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: PRPPGWFLQCWHLAA*FFSRCVGLFCWNRQ
Trigger: CTGCCTGTTCCAACAGAACAGCCCCACGCAGCGGGAGAAGAAGCAGGCAGCAAGGTGCCAGCACTGCAGAAACCACCCTGGTGGACGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS-3UTR CAA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATGTGAGCCGCTCCCGGTaGGGGAGCCGCTTGCGCCCC +
Preference number: 5 (lower is better)
Translates to: FLLASVGPQPPITCLLPNVSRSR*GSRLRP
Trigger: GGGGCGCAAGCGGCTCCCCAACCGGGAGCGGCTCAC...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 90 bp CCTCTGACCCCGTCCACCAGGGTGGTTTCTGCAGTGCTGGCACCTTaGTGCCTGCTTCTTCTCCCGCTGCGTGGGGCTGTTCTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: PLTPSTRVVSAVLAP*CLLLLPLRGAVLLE
Trigger: TTCCAACAGAACAGCCCCACGCAGCGGGAGAAGAAGCAGGCAGCAAGGTGCCAGCACTGCAGAAACCACCCTGGTGGACGGGGTCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS-3UTR CAA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGACCCGTGGTTTCCTACTaGCCAGTGTTGGCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGPVVSY*PVLAPS
Trigger: GCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGG...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS CCA 90 bp GGCCACAGACAGGACGGGGTGAATGAGGCCACAGCCAAAGGAGGTTaGGTCAACCTCCCAGAACATGCTTCACGTCAGGGGCAGCATCCG +
Preference number: 5 (lower is better)
Translates to: GHRQDGVNEATAKGG*VNLPEHASRQGQHP
Trigger: CGGATGCTGCCCCTGACGTGAAGCATGTTCTGGGAGGTTGACCCAACCTCCTTTGGCTGTGGCCTCATTCACCCCGTCCTGTCTGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468950.5
ENST00000478958.5
CDS CCA 90 bp CACCTTGCTGCCTGCTTCTTCTCCCGCTGCGTGGGGCTGTTCTGTTaGAACAGGCAGAATGGTGCTGGTAAGGGACGTGTTCCGCCACGA +
Preference number: 5 (lower is better)
Translates to: HLAACFFSRCVGLFC*NRQNGAGKGRVPPR
Trigger: TCGTGGCGGAACACGTCCCTTACCAGCACCATTCTGCCTGTTCCAACAGAACAGCCCCACGCAGCGGGAGAAGAAGCAGGCAGCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 90 bp AGTGAAAGGAGGCGGCTTCGGCATGGCATTCCCCAGCCAAGGTTCTaGGATGAAAGACGGCAGCAGCGAAGGCCTGCTGGACACCTTCAC +
Preference number: 5 (lower is better)
Translates to: SERRRLRHGIPQPRF*DERRQQRRPAGHLH
Trigger: GTGAAGGTGTCCAGCAGGCCTTCGCTGCTGCCGTCTTTCATCTCAGAACCTTGGCTGGGGAATGCCATGCCGAAGCCGCCTCCTTTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS GCA 90 bp TCTTCAGGCCTTGCGGCCCAGCCACGGGAACACTCCCCTAAACACTaGACCCGCTGTTTTTCCAGATCCAAACTCACACGCCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: SSGLAAQPREHSPKH*TRCFSRSKLTRPSQ
Trigger: CTGACTCGGGCGTGTGAGTTTGGATCTGGAAAAACAGCGGGTGCAGTGTTTAGGGGAGTGTTCCCGTGGCTGGGCCGCAAGGCCTGAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS-3UTR CAA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATCGCTGATCTGTCTGTaGGCATCCCTTTGTAGGTCC +
Preference number: 5 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGSLICL*ASLCRS
Trigger: GGACCTACAAAGGGATGCCAACAGACAGATCAGCGA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp AAGGAGGCGGCTTCGGCATGGCATTCCCCAGCCAAGGTTCTGAGATaGAAGACGGCAGCAGCGAAGGCCTGCTGGACACCTTCACTATTT +
Preference number: 5 (lower is better)
Translates to: KEAASAWHSPAKVLR*KTAAAKACWTPSLF
Trigger: AAATAGTGAAGGTGTCCAGCAGGCCTTCGCTGCTGCCGTCTTTCATCTCAGAACCTTGGCTGGGGAATGCCATGCCGAAGCCGCCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS-3UTR CAA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGAAGAGCGGAGCTCTCTTaGGAGTTTCCGTTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGRAELS*EFPFFC
Trigger: GCAGAAAAACGGAAACTCCAAAGAGAGCTCCGCTCT...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCGTGAAAGAGTTTTGCTaGGTAATGGCTTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPVKEFC*VMACGS
Trigger: GGAACCACAAGCCATTACCAAGCAAAACTCTTTCAC...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp GCCAAGCAAGCTATTCTTGGTTACTATTTCTGGGCGACCCTGTGCTaGCATGATGGGGACCCATTTCCTCTGACCCCGTCCACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: AKQAILGYYFWATLC*HDGDPFPLTPSTRV
Trigger: CACCCTGGTGGACGGGGTCAGAGGAAATGGGTCCCCATCATGTCAGCACAGGGTCGCCCAGAAATAGTAACCAAGAATAGCTTGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 90 bp AGCGCTGTACAGACAGGAGGGCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SAVQTGGPQASTTTH*HALVFIRSRCVSSG
Trigger: TCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGCCCTCCTGTCTGTACAGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473815.1
CDS TCA 90 bp CCCGCTGTTTTTCCAGATCCAAACTCACACGCCCGAGTCAGACCCTaGCTCAAAGCTCTTAGCTCACTAGGACACTGCTGTCATGCGGCC +
Preference number: 5 (lower is better)
Translates to: PAVFPDPNSHARVRP*LKALSSLGHCCHAA
Trigger: GGCCGCATGACAGCAGTGTCCTAGTGAGCTAAGAGCTTTGAGTCAGGGTCTGACTCGGGCGTGTGAGTTTGGATCTGGAAAAACAGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS-3UTR CAA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTCGGTTGGGGAGCCGCTaGCGCCCCGATCCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLRLGSR*RPDPWV
Trigger: CACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCG...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp GCAAGCTATTCTTGGTTACTATTTCTGGGCGACCCTGTGCTGACATaGTGGGGACCCATTTCCTCTGACCCCGTCCACCAGGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: ASYSWLLFLGDPVLT*WGPISSDPVHQGGF
Trigger: GAAACCACCCTGGTGGACGGGGTCAGAGGAAATGGGTCCCCATCATGTCAGCACAGGGTCGCCCAGAAATAGTAACCAAGAATAGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS GCA 90 bp CCAAGTCAGGCTGCGACCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: PSQAATSGFHDYPLT*ARLHQKPMCFFWIY
Trigger: GTAGATCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGTCGCAGCCTGACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp ATACTCCAAGTCAGGCTGCGACCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ILQVRLRPQASTTTH*HALVFIRSRCVSSG
Trigger: TCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGTCGCAGCCTGACTTGGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp TTTCAACCTAATATCACGGTGAATGAGGCCACAGACAGGACGGGGTaGATGAGGCCACAGCCAAAGGAGGTTGGGTCAACCTCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: FQPNITVNEATDRTG*MRPQPKEVGSTSQN
Trigger: GTTCTGGGAGGTTGACCCAACCTCCTTTGGCTGTGGCCTCATTCACCCCGTCCTGTCTGTGGCCTCATTCACCGTGATATTAGGTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000468950.5
ENST00000478958.5
ENST00000489603.5
CDS GCA 90 bp TGTACAGACAGGAGGGCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: CTDRRASGFHDYPLT*ARLHQKPMCFFWIY
Trigger: GTAGATCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGCCCTCCTGTCTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473815.1
CDS CCA 90 bp TCTCTCGGTCGCTCCCCCTCATCCCTGAAACAGCATTTTCTTCACTaGTTTCAAGGACTCAAGCTTCTCCTGGGCCTGCTCAACAGCTGT +
Preference number: 5 (lower is better)
Translates to: SLGRSPSSLKQHFLH*FQGLKLLLGLLNSC
Trigger: ACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAGTGAAGAAAATGCTGTTTCAGGGATGAGGGGGAGCGACCGAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp CCACGGTCTTCGTCTCTCGGAAGGCAGGGGAAGAAGCAGCGCTCCCAGATAGGATGGTCCTTTAACTCATaGAGTTCCTTGATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PRSSSLGRQGKKQRSQIGWSFNS*SSLISL
Trigger: CAGGGAAATCAAGGAACTCAATGAGTTAAAGGACCA...TCCTATCTGGGAGCGCTGCTTCTTCCCCTGCCTTCCGAGAGACGAAGACCGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp TGCTCACCTGTCCGACCCGTGGTTTCCTACTTGCCAGTGTTGGCCCCCAGCCCCAGACTAGATATGGTTTaGGATGATACTGACTCAGTT +
Preference number: 5 (lower is better)
Translates to: CSPVRPVVSYLPVLAPSPRLDMV*DDTDSV
Trigger: AACTGAGTCAGTATCATCCAAAACCATATCTAGTCT...GGGGCTGGGGGCCAACACTGGCAAGTAGGAAACCACGGGTCGGACAGGTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp CTTGGACCAGAAACTGTGCCATGCAAACTCCATCATTCTGGTTACTaGCCCTCAGGCTTCCACGACTACCCACTGACATGCGCTCGTCTT +
Preference number: 5 (lower is better)
Translates to: LGPETVPCKLHHSGY*PSGFHDYPLTCARL
Trigger: AAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTCAGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTCTGGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp CTGGTCTCTCTTCTACCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: LVSLLPSGFHDYPLT*ARLHQKPMCFFWIY
Trigger: GTAGATCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTAGAAGAGAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244815.9
ENST00000392000.4
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATTCCCGCGCGATCTGGTaGAGCGCGTCGTCCTCCGCC +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNSRAIW*SASSSA
Trigger: GGCGGAGGACGACGCGCTCAACCAGATCGCGCGGGA...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCACCTGCCAGCACATTTaGCTCACCTGTCCGACCCGT +
Preference number: 5 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSTCQHI*LTCPTR
Trigger: ACGGGTCGGACAGGTGAGCAAAATGTGCTGGCAGGT...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp TCCATCATTCTGGTTACTGACCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SIILVTDPQASTTTH*HALVFIRSRCVSSG
Trigger: TCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTCAGTAACCAGAATGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp CGGCTGCATGCAAACAGGCTGCTAATCTTCTACCTTAGGTTAGCATaGAAGAACGCTAGGGCCAAACCACGCTGCAACACAAGATCTCAC +
Preference number: 5 (lower is better)
Translates to: RLHANRLLIFYLRLA*KNARAKPRCNTRSH
Trigger: GTGAGATCTTGTGTTGCAGCGTGGTTTGGCCCTAGCGTTCTTGCATGCTAACCTAAGGTAGAAGATTAGCAGCCTGTTTGCATGCAGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468950.5
ENST00000478958.5
CDS-3UTR CAA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATGTGATGTGTGAGTGTTaGCTGCTGGTGTTATTCACG +
Preference number: 5 (lower is better)
Translates to: FLLASVGPQPPITCLLPNVMCEC*LLVLFT
Trigger: CGTGAATAACACCAGCAGCAAACACTCACACATCAC...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp TTTGGCAAAATCACTACGGATCTGCTTTTGGCACTGCAAGGACACTaGCAAGGACAGAGTGGCTTCACAGCACAGCAACCGTGTTTCACC +
Preference number: 5 (lower is better)
Translates to: FGKITTDLLLALQGH*QGQSGFTAQQPCFT
Trigger: GGTGAAACACGGTTGCTGTGCTGTGAAGCCACTCTGTCCTTGTCAGTGTCCTTGCAGTGCCAAAAGCAGATCCGTAGTGATTTTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 90 bp CTGGTTTCAAGGACTCAAGCTTCTCCTGGGCCTGCTCAACAGCTGTaGTGTCTGGGCCTTGTCTACAGACTTTGTCAATTGAGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: LVSRTQASPGPAQQL*CLGLVYRLCQLSFA
Trigger: TGCAAAGCTCAATTGACAAAGTCTGTAGACAAGGCCCAGACATCACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp TCAGAATGCGGGGATGAGAAAGTAAAGGGCTTGGACCAGAAACTGTaGCATGCAAACTCCATCATTCTGGTTACTGACCCTCAGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SECGDEKVKGLDQKL*HANSIILVTDPQAS
Trigger: GGAAGCCTGAGGGTCAGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTCTGGTCCAAGCCCTTTACTTTCTCATCCCCGCATTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCTTCACTAAGTGGCCGTaGCTCACCTCGAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSFTKWP*LTSSSS
Trigger: AGAAGAGCTCGAGGTGAGCAACGGCCACTTAGTGAA...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp TTCTCCATCATAACCATTTGTCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FSIITICPQASTTTH*HALVFIRSRCVSSG
Trigger: TCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGACAAATGGTTATGATGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420665.5
CDS GCA 90 bp CATCATAACCATTTGTCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTCTGGATCTAC +
Preference number: 5 (lower is better)
Translates to: HHNHLSSGFHDYPLT*ARLHQKPMCFFWIY
Trigger: GTAGATCCAGAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGACAAATGGTTATGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420665.5
CDS GCA 90 bp ATGGGTGTCAGTGGATACAGACTTACTAAAGGGCAGACGCGCCTTTaGATTCCTGTGGAACACCAATGTGCTGAGACAACTGTGCTAATC +
Preference number: 5 (lower is better)
Translates to: MGVSGYRLTKGQTRL*IPVEHQCAETTVLI
Trigger: GATTAGCACAGTTGTCTCAGCACATTGGTGTTCCACAGGAATGCAAAGGCGCGTCTGCCCTTTAGTAAGTCTGTATCCACTGACACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp AGCATTTTCTTCACTGGTTTCAAGGACTCAAGCTTCTCCTGGGCCTaGTCAACAGCTGTGATGTCTGGGCCTTGTCTACAGACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SIFFTGFKDSSFSWA*STAVMSGPCLQTLS
Trigger: TGACAAAGTCTGTAGACAAGGCCCAGACATCACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAGTGAAGAAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CCA 90 bp TACGGATCTGCTTTTGGCACTGCAAGGACACTGACAAGGACAGAGTaGCTTCACAGCACAGCAACCGTGTTTCACCTCTGCATTTTATCA +
Preference number: 5 (lower is better)
Translates to: YGSAFGTARTLTRTE*LHSTATVFHLCILS
Trigger: TGATAAAATGCAGAGGTGAAACACGGTTGCTGTGCTGTGAAGCCACTCTGTCCTTGTCAGTGTCCTTGCAGTGCCAAAAGCAGATCCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTCTGAATATCTCCCTTTaGCCGGTGGGCCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLNISL*PVGPAW
Trigger: CCATGCTGGGCCCACCGGCAAAAGGGAGATATTCAG...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp AGAAAAGCCTATGAAACAATGCTCTCCAGTCACCAACCAGTTGCCTaGTCAGAGCTGGAATTTACTGCTGGGACAAGAGTGCACTCCGAT +
Preference number: 5 (lower is better)
Translates to: RKAYETMLSSHQPVA*SELEFTAGTRVHSD
Trigger: ATCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS TCA 90 bp GCTGGAGTGATGACAGTGATGATAACGTATGCTGCACACTCGCTCTaGCACAGGTACAGTTCTAGCAGCTTCGACATCATTAGCTCGTTT +
Preference number: 5 (lower is better)
Translates to: AGVMTVMITYAAHSL*HRYSSSSFDIISSF
Trigger: AAACGAGCTAATGATGTCGAAGCTGCTAGAACTGTACCTGTGTCAGAGCGAGTGTGCAGCATACGTTATCATCACTGTCATCACTCCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 90 bp ACAAGGACAGAGTGGCTTCACAGCACAGCAACCGTGTTTCACCTCTaGATTTTATCATTGGGAAGGGCCAAATTACATGCACACTCAGTG +
Preference number: 5 (lower is better)
Translates to: TRTEWLHSTATVFHL*ILSLGRAKLHAHSV
Trigger: CACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACGGTTGCTGTGCTGTGAAGCCACTCTGTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp GAGGTTTGGGCAAAATCCCACACTAGTTTAAAGGCACAGTCAGAATaGTGGAGTGATGACAGTGATGATAACGTATGCTGCACACTCGCT +
Preference number: 5 (lower is better)
Translates to: EVWAKSHTSLKAQSE*WSDDSDDNVCCTLA
Trigger: AGCGAGTGTGCAGCATACGTTATCATCACTGTCATCACTCCAGCATTCTGACTGTGCCTTTAAACTAGTGTGGGATTTTGCCCAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CCA 90 bp ATGAAACAATGCTCTCCAGTCACCAACCAGTTGCCTGATCAGAGCTaGAATTTACTGCTGGGACAAGAGTGCACTCCGATTTGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: MKQCSPVTNQLPDQS*NLLLGQECTPICFH
Trigger: ATGAAAGCAAATCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS CCA 90 bp GTTTGGGCAAAATCCCACACTAGTTTAAAGGCACAGTCAGAATGCTaGAGTGATGACAGTGATGATAACGTATGCTGCACACTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: VWAKSHTSLKAQSEC*SDDSDDNVCCTLAL
Trigger: CAGAGCGAGTGTGCAGCATACGTTATCATCACTGTCATCACTCCAGCATTCTGACTGTGCCTTTAAACTAGTGTGGGATTTTGCCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS-3UTR CAA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCAACTCATTGAGTTCCTaGATTTCCCTGATGGATGCC +
Preference number: 5 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSNSLSS*ISLMDA
Trigger: GGCATCCATCAGGGAAATCAAGGAACTCAATGAGTT...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTCCAGTCACCAACCAGTaGCCTGATCAGAGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLPVTNQ*PDQSWN
Trigger: ATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGG...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp TTCCTACTTGCCAGTGTTGGCCCCCAGCCCCCTATAACTTGTCTGCTTCCCAATTTTTCAGTGAAGCTATaGCCTAATTACCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: FLLASVGPQPPITCLLPNFSVKL*PNYPGK
Trigger: TTTTCCAGGGTAATTAGGCAATAGCTTCACTGAAAA...ATTGGGAAGCAGACAAGTTATAGGGGGCTGGGGGCCAACACTGGCAAGTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS CCA 90 bp GGCTTCACAGCACAGCAACCGTGTTTCACCTCTGCATTTTATCATTaGGAAGGGCCAAATTACATGCACACTCAGTGCATGTATAAGAAG +
Preference number: 5 (lower is better)
Translates to: GFTAQQPCFTSAFYH*EGPNYMHTQCMYKK
Trigger: CTTCTTATACATGCACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACGGTTGCTGTGCTGTGAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCTCTTCTTTTGTCATCTaGGTAGGACCTTGGTATCCA +
Preference number: 5 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSSSFVI*VGPWYP
Trigger: TGGATACCAAGGTCCTACCAAGATGACAAAAGAAGA...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp AAGAAGCAGCGCTCCCAGATAGGACAGAGAAAAGCCTATGAAACAATGCTCTCCCGATGTCACCCCATTTaGTATCCAGCCCATAATATT +
Preference number: 5 (lower is better)
Translates to: KKQRSQIGQRKAYETMLSRCHPI*YPAHNI
Trigger: AATATTATGGGCTGGATACAAAATGGGGTGACATCG...GGAGAGCATTGTTTCATAGGCTTTTCTCTGTCCTATCTGGGAGCGCTGCTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATCCAGCCCCCTATAACTaGTCTGCTTCCCAATGGGCA +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNPAPYN*SASQWA
Trigger: TGCCCATTGGGAAGCAGACAAGTTATAGGGGGCTGG...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 90 bp TTCTACCTTAGGTTAGCATGCAAGAACGCTAGGGCCAAACCACGCTaGAACACAAGATCTCACAGGCTTCATGGTTTAACATTATTAGCA +
Preference number: 5 (lower is better)
Translates to: FYLRLACKNARAKPR*NTRSHRLHGLTLLA
Trigger: TGCTAATAATGTTAAACCATGAAGCCTGTGAGATCTTGTGTTGCAGCGTGGTTTGGCCCTAGCGTTCTTGCATGCTAACCTAAGGTAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS-3UTR CAA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTCCTCCAGCTGCCCTTaGAGTTTCTTAATCTGTTCC +
Preference number: 5 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLSSSCP*SFLICS
Trigger: GGAACAGATTAAGAAACTCAAAGGGCAGCTGGAGGA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATGTAGAGACTGAAGGCTaGACTTCCTCAGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNVETEG*TSSEPL
Trigger: CAGTGGCTCTGAGGAAGTCAAGCCTTCAGTCTCTAC...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp AAGCAAGAAGGAAGGATGGGCAGGTGGTTTCAGGTGCCCTGTTCATaGACCGGTAAAGTAATAAAAAGATTGTTACCTGTTCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: KQEGRMGRWFQVPCS*TGKVIKRLLPVPIS
Trigger: GCTTATTGGAACAGGTAACAATCTTTTTATTACTTTACCGGTTCATGAACAGGGCACCTGAAACCACCTGCCCATCCTTCCTTCTTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483443.1
CDS CCA 90 bp TGCTGTATCCAGCAAAGTAAATGTGGTTTCCATCGGCACAACATGTaGTGGTATCTTGGTGCACGTTTTTGGGTACCTGTTCTATTTCAT +
Preference number: 5 (lower is better)
Translates to: CCIQQSKCGFHRHNM*WYLGARFWVPVLFH
Trigger: ATGAAATAGAACAGGTACCCAAAAACGTGCACCAAGATACCACCACATGTTGTGCCGATGGAAACCACATTTACTTTGCTGGATACAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474195.1
CDS-3UTR CAA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTTTGCTTGGTAATGGCTaGTGGTTCCACAGTGTTTTG +
Preference number: 5 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCLLGNG*WFHSVL
Trigger: CAAAACACTGTGGAACCACAAGCCATTACCAAGCAA...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp CTTTTGTCCTTGATGATATTGCCATCGTCTCTACTGTTACCTCCTCCTTCACTTTGGTTCCACAGTGTTTaGTGTATGAAAAGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: LLSLMILPSSLLLPPPSLWFHSV*CMKSVD
Trigger: GTCTACGCTTTTCATACACAAAACACTGTGGAACCA...AAGTGAAGGAGGAGGTAACAGTAGAGACGATGGCAATATCATCAAGGACAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTGCTGGGAGTGTTTTCTaGATTATATACCCTGAACTC +
Preference number: 5 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCAGSVF*IIYPEL
Trigger: GAGTTCAGGGTATATAATCAAGAAAACACTCCCAGC...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp CCAATCTTCTGTCTCTCCTCCAGCTGCCCTTTGAGTTTCTTAATCTaGAAACACCCGCCAGTAAAATCTGTTAATTTCTCTACTCTGAAT +
Preference number: 5 (lower is better)
Translates to: PIFCLSSSCPLSFLI*KHPPVKSVNFSTLN
Trigger: ATTCAGAGTAGAGAAATTAACAGATTTTACTGGCGGGTGTTTTCAGATTAAGAAACTCAAAGGGCAGCTGGAGGAGAGACAGAAGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464608.5
ENST00000474195.1
CDS GCA 90 bp ACACTCAGTGCATGTATAAGAAGTCAAGGAGTAATAGGATTTAATTaGCACAGTGAAGAGAAACAAGCCTTCAGCTCTATGTGGTCCCTA +
Preference number: 5 (lower is better)
Translates to: TLSACIRSQGVIGFN*HSEEKQAFSSMWSL
Trigger: TAGGGACCACATAGAGCTGAAGGCTTGTTTCTCTTCACTGTGGCAATTAAATCCTATTACTCCTTGACTTCTTATACATGCACTGAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp TTCTTGATTATATACCCTGAACTCACAACCCTCACTCCAGCATTCTCCATGTGTTTTGCAAGTTTAAATTaGAGGTCGCTGATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: FLIIYPELTTLTPAFSMCFASLN*RSLICL
Trigger: CAGACAGATCAGCGACCTCAAATTTAAACTTGCAAA...ACACATGGAGAATGCTGGAGTGAGGGTTGTGAGTTCAGGGTATATAATCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 90 bp CTCAACAGCTGTGATGTCTGGGCCTTGTCTACAGACTTTGTCAATTaGGCTTTGCATTTATTCTATTTTGGATCCATAAATCTTCCCTCT +
Preference number: 5 (lower is better)
Translates to: LNSCDVWALSTDFVN*ALHLFYFGSINLPS
Trigger: AGAGGGAAGATTTATGGATCCAAAATAGAATAAATGCAAAGCTCAATTGACAAAGTCTGTAGACAAGGCCCAGACATCACAGCTGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 90 bp CAATGTACAAACACCGAGAATCACAATTCAATAGCACCAACATTTTaGACAGCCTCGCCTTTCCGAGTTTACATCCCAGATGTATTTATC +
Preference number: 5 (lower is better)
Translates to: QCTNTENHNSIAPTF*TASPFRVYIPDVFI
Trigger: GATAAATACATCTGGGATGTAAACTCGGAAAGGCGAGGCTGTTCAAAATGTTGGTGCTATTGAATTGTGATTCTCGGTGTTTGTACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 90 bp CGTGTTTCACCTCTGCATTTTATCATTGGGAAGGGCCAAATTACATaGACACTCAGTGCATGTATAAGAAGTCAAGGAGTAATAGGATTT +
Preference number: 5 (lower is better)
Translates to: RVSPLHFIIGKGQIT*TLSACIRSQGVIGF
Trigger: AAATCCTATTACTCCTTGACTTCTTATACATGCACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 90 bp GCCTTCAGCTCTATGTGGTCCCTAAGGATTAATAAAGCGAGTGGCTaGTTTGAGATTTATTTATTACTAGCGGTGAGATGTAATTTCAAT +
Preference number: 5 (lower is better)
Translates to: AFSSMWSLRINKASG*FEIYLLLAVRCNFN
Trigger: ATTGAAATTACATCTCACCGCTAGTAATAAATAAATCTCAAAGCAGCCACTCGCTTTATTAATCCTTAGGGACCACATAGAGCTGAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS-3UTR CAA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCCCCATAATATTTCTTTaGGACCTGATAGATCTCCTT +
Preference number: 5 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSAPIIFL*DLIDLL
Trigger: AAGGAGATCTATCAGGTCCAAAAGAAATATTATGGG...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp GAAAAGCGTAGACTAAGAGATACTACTGAAGTCGCTCAAATTGTAGATTCTGCCAATGCCCCTATCTTTTaGTCTTTCCACTCTATTGTT +
Preference number: 5 (lower is better)
Translates to: EKRRLRDTTEVAQIVDSANAPIF*SFHSIV
Trigger: AACAATAGAGTGGAAAGACAAAAAGATAGGGGCATT...GGCAGAATCTACAATTTGAGCGACTTCAGTAGTATCTCTTAGTCTACGCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATTTGTCCTTGATGATATaGCCATCGTCTCTACTGTTA +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNLSLMI*PSSLLL
Trigger: TAACAGTAGAGACGATGGCAATATCATCAAGGACAA...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATGAAGTGTGTGTAACATaGGTTTGCTGTTTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNEVCVT*VCCFQK
Trigger: CTTTTGGAAACAGCAAACCAATGTTACACACACTTC...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS-3UTR CAA 90 bp ATTGTAGATTCTGCCATGAAAGGAAGTCCCAACACTGTAACATTTCCCCTTAATTGTCTTTCCACTCTATaGTTTCCTGAAGATCAGAAA +
Preference number: 5 (lower is better)
Translates to: IVDSAMKGSPNTVTFPLNCLSTL*FPEDQK
Trigger: TTTCTGATCTTCAGGAAACAATAGAGTGGAAAGACA...ATTAAGGGGAAATGTTACAGTGTTGGGACTTCCTTTCATGGCAGAATCTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS CAA 72 bp GCAGCGAGCCGGGCTTCCGCCTCCCGCGCGATCTGGTaGAGCGCGTCGTCCTCCGCCGTGAGCCGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: AASRASASRAIW*SASSSAVSRSR
Trigger: CCGGGAGCGGCTCACGGCGGAGGACGACGCGCTCAACCAGATCGCGCGGGAGGCGGAAGCCCGGCTCGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS CCA 72 bp CGCTCCCGGTTGGGGAGCCGCTTGCGCCCCGATCCCTaGGTGCCCATGTCCATCGACCGCGTCGCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RSRLGSRLRPDP*VPMSIDRVARS
Trigger: GCTGCGGGCGACGCGGTCGATGGACATGGGCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCGGGAGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS CAA 72 bp TTGAGCGCGTCGTCCTCCGCCGTGAGCCGCTCCCGGTaGGGGAGCCGCTTGCGCCCCGATCCCTGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: LSASSSAVSRSR*GSRLRPDPWVP
Trigger: GGGCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCGGGAGCGGCTCACGGCGGAGGACGACGCGCTCAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS CAA 72 bp TCCTCCGCCGTGAGCCGCTCCCGGTTGGGGAGCCGCTaGCGCCCCGATCCCTGGGTGCCCATGTCCATCGAC +
Preference number: 6 (lower is better)
Translates to: SSAVSRSRLGSR*RPDPWVPMSID
Trigger: GTCGATGGACATGGGCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCGGGAGCGGCTCACGGCGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS CAA 90 bp GCGATCTGGTTGAGCGCGTCGTCCTCCGCCGTGAGCCGCTCCCGGTaGGGGAGCCGCTTGCGCCCCGATCCCTGGGTGCCCATGTCCATC +
Preference number: 6 (lower is better)
Translates to: AIWLSASSSAVSRSR*GSRLRPDPWVPMSI
Trigger: GATGGACATGGGCACCCAGGGATCGGGGCGCAAGCGGCTCCCCAACCGGGAGCGGCTCACGGCGGAGGACGACGCGCTCAACCAGATCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000465870.5
CDS GCA 72 bp GGCCGCTGTACTCCGAGGGAGCACGGGAGCCGGAGGTaGTGCCCCGTCGGGTCCCACCGAAGCTGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: GRCTPREHGSRR*CPVGSHRSCLH
Trigger: ATGAAGGCAGCTTCGGTGGGACCCGACGGGGCAGCACCTCCGGCTCCCGTGCTCCCTCGGAGTACAGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 72 bp CGCTGTACTCCGAGGGAGCACGGGAGCCGGAGGTGCTaGCCCGTCGGGTCCCACCGAAGCTGCCTTCATCCA +
Preference number: 6 (lower is better)
Translates to: RCTPREHGSRRC*PVGSHRSCLHP
Trigger: TGGATGAAGGCAGCTTCGGTGGGACCCGACGGGGCAGCACCTCCGGCTCCCGTGCTCCCTCGGAGTACAGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 72 bp CCAGGGTGGTTTCTGCAGTGCTGGCACCTTGCTGCCTaGTTCTTCTCCCGCTGCGTGGGGCTGTTCTGTTGG +
Preference number: 6 (lower is better)
Translates to: PGWFLQCWHLAA*FFSRCVGLFCW
Trigger: CCAACAGAACAGCCCCACGCAGCGGGAGAAGAAGCAGGCAGCAAGGTGCCAGCACTGCAGAAACCACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 72 bp GCTTCGGCATGGCATTCCCCAGCCAAGGTTCTGAGATaGAAGACGGCAGCAGCGAAGGCCTGCTGGACACCT +
Preference number: 6 (lower is better)
Translates to: ASAWHSPAKVLR*KTAAAKACWTP
Trigger: AGGTGTCCAGCAGGCCTTCGCTGCTGCCGTCTTTCATCTCAGAACCTTGGCTGGGGAATGCCATGCCGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 72 bp CCAGAGCTGAGAGTAGGAGAAGGCACTCTCTCCCCATaGACCCAGGGAAAGTGCCTTCCGCCCCTGTGCTTG +
Preference number: 6 (lower is better)
Translates to: PELRVGEGTLSP*TQGKCLPPLCL
Trigger: CAAGCACAGGGGCGGAAGGCACTTTCCCTGGGTTCATGGGGAGAGAGTGCCTTCTCCTACTCTCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474195.1
CDS CCA 72 bp CAGGACGGGGTGAATGAGGCCACAGCCAAAGGAGGTTaGGTCAACCTCCCAGAACATGCTTCACGTCAGGGG +
Preference number: 6 (lower is better)
Translates to: QDGVNEATAKGG*VNLPEHASRQG
Trigger: CCCCTGACGTGAAGCATGTTCTGGGAGGTTGACCCAACCTCCTTTGGCTGTGGCCTCATTCACCCCGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468950.5
ENST00000478958.5
CDS CAA 90 bp ATGAGGCTCAGAGGCCCAGAACCACTAAGCAAGTTTCTTCAGGCCTaGCGGCCCAGCCACGGGAACACTCCCCTAAACACTGCACCCGCT +
Preference number: 6 (lower is better)
Translates to: MRLRGPEPLSKFLQA*RPSHGNTPLNTAPA
Trigger: AGCGGGTGCAGTGTTTAGGGGAGTGTTCCCGTGGCTGGGCCGCAAGGCCTGAAGAAACTTGCTTAGTGGTTCTGGGCCTCTGAGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 72 bp CACAGCCAAAGGAGGTTGGGTCAACCTCCCAGAACATaGTTCACGTCAGGGGCAGCATCCGGCTGCATGCAA +
Preference number: 6 (lower is better)
Translates to: HSQRRLGQPPRT*FTSGAASGCMQ
Trigger: TTGCATGCAGCCGGATGCTGCCCCTGACGTGAAGCATGTTCTGGGAGGTTGACCCAACCTCCTTTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468950.5
ENST00000478958.5
CDS GCA 72 bp CTTGCGGCCCAGCCACGGGAACACTCCCCTAAACACTaGACCCGCTGTTTTTCCAGATCCAAACTCACACGC +
Preference number: 6 (lower is better)
Translates to: LAAQPREHSPKH*TRCFSRSKLTR
Trigger: GCGTGTGAGTTTGGATCTGGAAAAACAGCGGGTGCAGTGTTTAGGGGAGTGTTCCCGTGGCTGGGCCGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CCA 72 bp GCCTGCTTCTTCTCCCGCTGCGTGGGGCTGTTCTGTTaGAACAGGCAGAATGGTGCTGGTAAGGGACGTGTT +
Preference number: 6 (lower is better)
Translates to: ACFFSRCVGLFC*NRQNGAGKGRV
Trigger: AACACGTCCCTTACCAGCACCATTCTGCCTGTTCCAACAGAACAGCCCCACGCAGCGGGAGAAGAAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 72 bp GTCAGGCTGCGACCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTT +
Preference number: 6 (lower is better)
Translates to: VRLRPQASTTTH*HALVFIRSRCV
Trigger: AACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGTCGCAGCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS TCA 72 bp CAGACAGGAGGGCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTT +
Preference number: 6 (lower is better)
Translates to: QTGGPQASTTTH*HALVFIRSRCV
Trigger: AACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGCCCTCCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473815.1
CDS CAA 72 bp GTTCGGGCAGGGTGCAGCGATCTGCGTCTTCGCTCTTaGGTTCTGCAGGACTGCTTTGAGTGGCACCATCTA +
Preference number: 6 (lower is better)
Translates to: VRAGCSDLRLRS*VLQDCFEWHHL
Trigger: TAGATGGTGCCACTCAAAGCAGTCCTGCAGAACCAAAGAGCGAAGACGCAGATCGCTGCACCCTGCCCGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244815.9
ENST00000289175.10
ENST00000392000.4
CDS CAA 72 bp AGAGGCCCAGAACCACTAAGCAAGTTTCTTCAGGCCTaGCGGCCCAGCCACGGGAACACTCCCCTAAACACT +
Preference number: 6 (lower is better)
Translates to: RGPEPLSKFLQA*RPSHGNTPLNT
Trigger: AGTGTTTAGGGGAGTGTTCCCGTGGCTGGGCCGCAAGGCCTGAAGAAACTTGCTTAGTGGTTCTGGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 72 bp GCTGCGACCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: AATSGFHDYPLT*ARLHQKPMCFF
Trigger: GAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGTCGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 72 bp AGGAGGGCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: RRASGFHDYPLT*ARLHQKPMCFF
Trigger: GAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGCCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473815.1
CDS CCA 72 bp TTCGGGCAGGGTGCAGCGATCTGCGTCTTCGCTCTTTaGTTCTGCAGGACTGCTTTGAGTGGCACCATCTAT +
Preference number: 6 (lower is better)
Translates to: FGQGAAICVFAL*FCRTALSGTIY
Trigger: ATAGATGGTGCCACTCAAAGCAGTCCTGCAGAACCAAAGAGCGAAGACGCAGATCGCTGCACCCTGCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000244815.9
ENST00000289175.10
ENST00000392000.4
CDS TCA 72 bp GCTATTCTTGGTTACTATTTCTGGGCGACCCTGTGCTaGCATGATGGGGACCCATTTCCTCTGACCCCGTCC +
Preference number: 6 (lower is better)
Translates to: AILGYYFWATLC*HDGDPFPLTPS
Trigger: GGACGGGGTCAGAGGAAATGGGTCCCCATCATGTCAGCACAGGGTCGCCCAGAAATAGTAACCAAGAATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS TCA 72 bp CTGGTTACTGACCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTT +
Preference number: 6 (lower is better)
Translates to: LVTDPQASTTTH*HALVFIRSRCV
Trigger: AACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTCAGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CCA 72 bp CGCTCCCCCTCATCCCTGAAACAGCATTTTCTTCACTaGTTTCAAGGACTCAAGCTTCTCCTGGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: RSPSSLKQHFLH*FQGLKLLLGLL
Trigger: GAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAGTGAAGAAAATGCTGTTTCAGGGATGAGGGGGAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp TCTCTCTTCTACCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTT +
Preference number: 6 (lower is better)
Translates to: SLFYPQASTTTH*HALVFIRSRCV
Trigger: AACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTAGAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244815.9
ENST00000392000.4
CDS TCA 72 bp ATCACTACGGATCTGCTTTTGGCACTGCAAGGACACTaGCAAGGACAGAGTGGCTTCACAGCACAGCAACCG +
Preference number: 6 (lower is better)
Translates to: ITTDLLLALQGH*QGQSGFTAQQP
Trigger: CGGTTGCTGTGCTGTGAAGCCACTCTGTCCTTGTCAGTGTCCTTGCAGTGCCAAAAGCAGATCCGTAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 72 bp CTTCTACCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLPSGFHDYPLT*ARLHQKPMCFF
Trigger: GAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000244815.9
ENST00000392000.4
CDS GCA 72 bp CAGGGTGCAGCGATCTGCGTCTTCGCTCTTTGGTTCTaGAGGACTGCTTTGAGTGGCACCATCTATTTTAGC +
Preference number: 6 (lower is better)
Translates to: QGAAICVFALWF*RTALSGTIYFS
Trigger: GCTAAAATAGATGGTGCCACTCAAAGCAGTCCTGCAGAACCAAAGAGCGAAGACGCAGATCGCTGCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000244815.9
ENST00000289175.10
ENST00000392000.4
CDS GCA 72 bp TTCACTGGTTTCAAGGACTCAAGCTTCTCCTGGGCCTaGTCAACAGCTGTGATGTCTGGGCCTTGTCTACAG +
Preference number: 6 (lower is better)
Translates to: FTGFKDSSFSWA*STAVMSGPCLQ
Trigger: CTGTAGACAAGGCCCAGACATCACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp GAAACTGTGCCATGCAAACTCCATCATTCTGGTTACTaGCCCTCAGGCTTCCACGACTACCCACTGACATGC +
Preference number: 6 (lower is better)
Translates to: ETVPCKLHHSGY*PSGFHDYPLTC
Trigger: GCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGGTCAGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp GACGCGCCTTTGCATTCCTGTGGAACACCAATGTGCTaGGACAACTGTGCTAATCAAGGCTTGGGAGCTTTG +
Preference number: 6 (lower is better)
Translates to: DAPLHSCGTPMC*DNCANQGLGAL
Trigger: CAAAGCTCCCAAGCCTTGATTAGCACAGTTGTCTCAGCACATTGGTGTTCCACAGGAATGCAAAGGCGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp AGGACTCAAGCTTCTCCTGGGCCTGCTCAACAGCTGTaGTGTCTGGGCCTTGTCTACAGACTTTGTCAATTG +
Preference number: 6 (lower is better)
Translates to: RTQASPGPAQQL*CLGLVYRLCQL
Trigger: CAATTGACAAAGTCTGTAGACAAGGCCCAGACATCACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp TTTCCAGATCCAAACTCACACGCCCGAGTCAGACCCTaGCTCAAAGCTCTTAGCTCACTAGGACACTGCTGT +
Preference number: 6 (lower is better)
Translates to: FPDPNSHARVRP*LKALSSLGHCC
Trigger: ACAGCAGTGTCCTAGTGAGCTAAGAGCTTTGAGTCAGGGTCTGACTCGGGCGTGTGAGTTTGGATCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 72 bp CATTTGTCCTCAGGCTTCCACGACTACCCACTGACATaGGCTCGTCTTCATCAGAAGCCGATGTGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: HLSSGFHDYPLT*ARLHQKPMCFF
Trigger: GAAGAAACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGACAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420665.5
CDS CCA 72 bp TGCTCTCCAGTCACCAACCAGTTGCCTGATCAGAGCTaGAATTTACTGCTGGGACAAGAGTGCACTCCGATT +
Preference number: 6 (lower is better)
Translates to: CSPVTNQLPDQS*NLLLGQECTPI
Trigger: AATCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS CCA 72 bp TGGACCAGAAACTGTGCCATGCAAACTCCATCATTCTaGTTACTGACCCTCAGGCTTCCACGACTACCCACT +
Preference number: 6 (lower is better)
Translates to: WTRNCAMQTPSF*LLTLRLPRLPT
Trigger: AGTGGGTAGTCGTGGAAGCCTGAGGGTCAGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTCTGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp ATAACCATTTGTCCTCAGGCTTCCACGACTACCCACTaGCATGCGCTCGTCTTCATCAGAAGCCGATGTGTT +
Preference number: 6 (lower is better)
Translates to: ITICPQASTTTH*HALVFIRSRCV
Trigger: AACACATCGGCTTCTGATGAAGACGAGCGCATGTCAGTGGGTAGTCGTGGAAGCCTGAGGACAAATGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420665.5
CDS GCA 72 bp GCCGTTGCTCACCTCGAGCTCTTCTGTTTTATCCAATaGAGAGCGGAGCTCTCTTTGGAGTTTCCGTTTTTC +
Preference number: 6 (lower is better)
Translates to: AVAHLELFCFIQ*RAELSLEFPFF
Trigger: GAAAAACGGAAACTCCAAAGAGAGCTCCGCTCTGCATTGGATAAAACAGAAGAGCTCGAGGTGAGCAACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308482.14
ENST00000464608.5
ENST00000474195.1
ENST00000478958.5
CDS GCA 72 bp GCAAACAGGCTGCTAATCTTCTACCTTAGGTTAGCATaGAAGAACGCTAGGGCCAAACCACGCTGCAACACA +
Preference number: 6 (lower is better)
Translates to: ANRLLIFYLRLA*KNARAKPRCNT
Trigger: TGTGTTGCAGCGTGGTTTGGCCCTAGCGTTCTTGCATGCTAACCTAAGGTAGAAGATTAGCAGCCTGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468950.5
ENST00000478958.5
CDS CCA 72 bp ATTTTCTTCACTGGTTTCAAGGACTCAAGCTTCTCCTaGGCCTGCTCAACAGCTGTGATGTCTGGGCCTTGT +
Preference number: 6 (lower is better)
Translates to: IFFTGFKDSSFS*ACSTAVMSGPC
Trigger: ACAAGGCCCAGACATCACAGCTGTTGAGCAGGCCCAGGAGAAGCTTGAGTCCTTGAAACCAGTGAAGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CAA 72 bp GGACTATGGTGTGGGTTTGAGCCAAGCAAGCTATTCTaGGTTACTATTTCTGGGCGACCCTGTGCTGACATG +
Preference number: 6 (lower is better)
Translates to: GLWCGFEPSKLF*VTISGRPCADM
Trigger: CATGTCAGCACAGGGTCGCCCAGAAATAGTAACCAAGAATAGCTTGCTTGGCTCAAACCCACACCATAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468950.5
CDS GCA 72 bp GGGGATGAGAAAGTAAAGGGCTTGGACCAGAAACTGTaGCATGCAAACTCCATCATTCTGGTTACTGACCCT +
Preference number: 6 (lower is better)
Translates to: GDEKVKGLDQKL*HANSIILVTDP
Trigger: AGGGTCAGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTCTGGTCCAAGCCCTTTACTTTCTCATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 72 bp AGTGGATACAGACTTACTAAAGGGCAGACGCGCCTTTaGATTCCTGTGGAACACCAATGTGCTGAGACAACT +
Preference number: 6 (lower is better)
Translates to: SGYRLTKGQTRL*IPVEHQCAETT
Trigger: AGTTGTCTCAGCACATTGGTGTTCCACAGGAATGCAAAGGCGCGTCTGCCCTTTAGTAAGTCTGTATCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CAA 90 bp GACAGAGAAAAGCCTATGAAACAATGCTCTCCAGTCACCAACCAGTaGCCTGATCAGAGCTGGAATTTACTGCTGGGACAAGAGTGCACT +
Preference number: 6 (lower is better)
Translates to: DREKPMKQCSPVTNQ*PDQSWNLLLGQECT
Trigger: AGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTTTTCTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS TCA 72 bp TATGAAACAATGCTCTCCAGTCACCAACCAGTTGCCTaGTCAGAGCTGGAATTTACTGCTGGGACAAGAGTG +
Preference number: 6 (lower is better)
Translates to: YETMLSSHQPVA*SELEFTAGTRV
Trigger: CACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS TCA 72 bp AGAGATCTAATTATAACTGATACAAGGAAAAGCGGCTaGAGGCAGACCTTACGGATCCAGTCCTGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RDLIITDTRKSG*RQTLRIQSWSR
Trigger: CCTGGACCAGGACTGGATCCGTAAGGTCTGCCTTCAGCCGCTTTTCCTTGTATCAGTTATAATTAGATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 72 bp AGATCAGAAATCTCCCTGATAGAACTCGCCTGTTTCTaGTGTAGCTGTCGGATTTCCTCGAGCATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RSEISLIELACF*CSCRISSSISS
Trigger: AGAGGAAATGCTCGAGGAAATCCGACAGCTACAGCAGAAACAGGCGAGTTCTATCAGGGAGATTTCTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 72 bp TCACCAACCAGTTGCCTGATCAGAGCTGGAATTTACTaGTGGGACAAGAGTGCACTCCGATTTGCTTTCATT +
Preference number: 6 (lower is better)
Translates to: SPTSCLIRAGIY*WDKSALRFAFI
Trigger: AATGAAAGCAAATCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS GCA 72 bp GAGTGGCTTCACAGCACAGCAACCGTGTTTCACCTCTaGATTTTATCATTGGGAAGGGCCAAATTACATGCA +
Preference number: 6 (lower is better)
Translates to: EWLHSTATVFHL*ILSLGRAKLHA
Trigger: TGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACGGTTGCTGTGCTGTGAAGCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CCA 72 bp GCACAGCAACCGTGTTTCACCTCTGCATTTTATCATTaGGAAGGGCCAAATTACATGCACACTCAGTGCATG +
Preference number: 6 (lower is better)
Translates to: AQQPCFTSAFYH*EGPNYMHTQCM
Trigger: CATGCACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACGGTTGCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CAA 72 bp GTCACCCCATTTTGTATCCAGCCCATAATATTTCTTTaGGACCTGATAGATCTCCTTCTGCTGCCGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VTPFCIQPIIFL*DLIDLLLLPLQ
Trigger: CTGGAGCGGCAGCAGAAGGAGATCTATCAGGTCCAAAAGAAATATTATGGGCTGGATACAAAATGGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000473815.1
CDS CAA 72 bp AAGCCTATGAAACAATGCTCTCCAGTCACCAACCAGTaGCCTGATCAGAGCTGGAATTTACTGCTGGGACAA +
Preference number: 6 (lower is better)
Translates to: KPMKQCSPVTNQ*PDQSWNLLLGQ
Trigger: TTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGGTGACTGGAGAGCATTGTTTCATAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308482.14
ENST00000474195.1
ENST00000478958.5
CDS CAA 90 bp AGTAGCGCTCACTGTCTTCCATCCACTGCTCGATGTCACCCCATTTaGTATCCAGCCCATAATATTTCTTTTGGACCTGATAGATCTCCT +
Preference number: 6 (lower is better)
Translates to: SSAHCLPSTARCHPI*YPAHNISFGPDRSP
Trigger: AGGAGATCTATCAGGTCCAAAAGAAATATTATGGGCTGGATACAAAATGGGGTGACATCGAGCAGTGGATGGAAGACAGTGAGCGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000473815.1
CDS CCA 72 bp CCAACCAGTTGCCTGATCAGAGCTGGAATTTACTGCTaGGACAAGAGTGCACTCCGATTTGCTTTCATTTTT +
Preference number: 6 (lower is better)
Translates to: PTSCLIRAGIYC*DKSALRFAFIF
Trigger: AAAAATGAAAGCAAATCGGAGTGCACTCTTGTCCCAGCAGTAAATTCCAGCTCTGATCAGGCAACTGGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308482.14
ENST00000464608.5
ENST00000474195.1
ENST00000478958.5
CDS CCA 72 bp TGCCACAGTGAAGAGAAACAAGCCTTCAGCTCTATGTaGTCCCTAAGGATTAATAAAGCGAGTGGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CHSEEKQAFSSM*SLRINKASGCF
Trigger: AAAGCAGCCACTCGCTTTATTAATCCTTAGGGACCACATAGAGCTGAAGGCTTGTTTCTCTTCACTGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CCA 72 bp CAGCAAAGTAAATGTGGTTTCCATCGGCACAACATGTaGTGGTATCTTGGTGCACGTTTTTGGGTACCTGTT +
Preference number: 6 (lower is better)
Translates to: QQSKCGFHRHNM*WYLGARFWVPV
Trigger: AACAGGTACCCAAAAACGTGCACCAAGATACCACCACATGTTGTGCCGATGGAAACCACATTTACTTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474195.1
CDS CAA 72 bp GTCCCGTTTTCCAAGACATCATCTTCAGATCGAAGATaGTCTAGTTTGCCAATCTTCTGTCTCTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: VPFSKTSSSDRR*SSLPIFCLSSS
Trigger: GCTGGAGGAGAGACAGAAGATTGGCAAACTAGACAATCTTCGATCTGAAGATGATGTCTTGGAAAACGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000308482.14
ENST00000464608.5
ENST00000468950.5
ENST00000474195.1
ENST00000478958.5
ENST00000489603.5
CDS CAA 72 bp AGCACAGCAACCGTGTTTCACCTCTGCATTTTATCATaGGGAAGGGCCAAATTACATGCACACTCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: STATVFHLCILS*GRAKLHAHSVH
Trigger: ATGCACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGGTGAAACACGGTTGCTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CAA 90 bp AGCAAAGTAAATGTGGTTTCCATCGGCACAACATGTGGTGGTATCTaGGTGCACGTTTTTGGGTACCTGTTCTATTTCATAGGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SKVNVVSIGTTCGGI*VHVFGYLFYFIGSE
Trigger: CTCTGAGCCTATGAAATAGAACAGGTACCCAAAAACGTGCACCAAGATACCACCACATGTTGTGCCGATGGAAACCACATTTACTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474195.1
CDS TCA 72 bp GGAAGGATGGGCAGGTGGTTTCAGGTGCCCTGTTCATaGACCGGTAAAGTAATAAAAAGATTGTTACCTGTT +
Preference number: 6 (lower is better)
Translates to: GRMGRWFQVPCS*TGKVIKRLLPV
Trigger: AACAGGTAACAATCTTTTTATTACTTTACCGGTTCATGAACAGGGCACCTGAAACCACCTGCCCATCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483443.1
CDS GCA 72 bp TCCCGTTCACTCCTTACGGAATCAAAGAACTCTTTCTaGCTCTCTAATGCCCCTATCTTTTTGTCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: SRSLLTESKNSF*LSNAPIFLSFH
Trigger: GTGGAAAGACAAAAAGATAGGGGCATTAGAGAGGCAGAAAGAGTTCTTTGATTCCGTAAGGAGTGAACGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308482.14
CDS GCA 72 bp GCAAAATCCCACACTAGTTTAAAGGCACAGTCAGAATaGTGGAGTGATGACAGTGATGATAACGTATGCTGC +
Preference number: 6 (lower is better)
Translates to: AKSHTSLKAQSE*WSDDSDDNVCC
Trigger: GCAGCATACGTTATCATCACTGTCATCACTCCAGCATTCTGACTGTGCCTTTAAACTAGTGTGGGATTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS GCA 72 bp GGGAATGAGGGCATTCTTTGCCGTGACAGTTTTCTCTaGCAGCACAAGTATACTAAAACAGCACATGTGAAA +
Preference number: 6 (lower is better)
Translates to: GNEGILCRDSFL*QHKYTKTAHVK
Trigger: TTTCACATGTGCTGTTTTAGTATACTTGTGCTGGCAGAGAAAACTGTCACGGCAAAGAATGCCCTCATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474195.1
CDS CAA 72 bp CACTGTCTTCCATCCACTGCTCGATGTCACCCCATTTaGTATCCAGCCCATAATATTTCTTTTGGACCTGAT +
Preference number: 6 (lower is better)
Translates to: HCLPSTARCHPI*YPAHNISFGPD
Trigger: ATCAGGTCCAAAAGAAATATTATGGGCTGGATACAAAATGGGGTGACATCGAGCAGTGGATGGAAGACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308482.14
ENST00000473815.1
CDS CAA 72 bp AAGAAATCAGAATGCGGGGATGAGAAAGTAAAGGGCTaGGACCAGAAACTGTGCCATGCAAACTCCATCATT +
Preference number: 6 (lower is better)
Translates to: KKSECGDEKVKG*DQKLCHANSII
Trigger: AATGATGGAGTTTGCATGGCACAGTTTCTGGTCCAAGCCCTTTACTTTCTCATCCCCGCATTCTGATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp CTAATTTCCCTCATAGACTCATCGATGTCAGTGCCATaGGTATCTGTTTACAACCCTAAGTCCACTAACACC +
Preference number: 6 (lower is better)
Translates to: LISLIDSSMSVP*VSVYNPKSTNT
Trigger: GGTGTTAGTGGACTTAGGGTTGTAAACAGATACTCATGGCACTGACATCGATGAGTCTATGAGGGAAATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CCA 72 bp AAATCCCACACTAGTTTAAAGGCACAGTCAGAATGCTaGAGTGATGACAGTGATGATAACGTATGCTGCACA +
Preference number: 6 (lower is better)
Translates to: KSHTSLKAQSEC*SDDSDDNVCCT
Trigger: TGTGCAGCATACGTTATCATCACTGTCATCACTCCAGCATTCTGACTGTGCCTTTAAACTAGTGTGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CAA 72 bp AAACACCGAGAATCACAATTCAATAGCACCAACATTTaGAACAGCCTCGCCTTTCCGAGTTTACATCCCAGA +
Preference number: 6 (lower is better)
Translates to: KHRESQFNSTNI*NSLAFPSLHPR
Trigger: TCTGGGATGTAAACTCGGAAAGGCGAGGCTGTTCAAAATGTTGGTGCTATTGAATTGTGATTCTCGGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CAA 90 bp ATAATGAAGAAGAAATCAGAATGCGGGGATGAGAAAGTAAAGGGCTaGGACCAGAAACTGTGCCATGCAAACTCCATCATTCTGGTTACT +
Preference number: 6 (lower is better)
Translates to: IMKKKSECGDEKVKG*DQKLCHANSIILVT
Trigger: AGTAACCAGAATGATGGAGTTTGCATGGCACAGTTTCTGGTCCAAGCCCTTTACTTTCTCATCCCCGCATTCTGATTTCTTCTTCATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp TGTCTCTCCTCCAGCTGCCCTTTGAGTTTCTTAATCTaGAAACACCCGCCAGTAAAATCTGTTAATTTCTCT +
Preference number: 6 (lower is better)
Translates to: CLSSSCPLSFLI*KHPPVKSVNFS
Trigger: AGAGAAATTAACAGATTTTACTGGCGGGTGTTTTCAGATTAAGAAACTCAAAGGGCAGCTGGAGGAGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464608.5
ENST00000474195.1
CDS GCA 72 bp TTGTCTAGTTTGCCAATCTTCTGTCTCTCCTCCAGCTaGCCTTTGAGTTTCTTAATCTGTTCCAATAAGCAT +
Preference number: 6 (lower is better)
Translates to: LSSLPIFCLSSS*PLSFLICSNKH
Trigger: ATGCTTATTGGAACAGATTAAGAAACTCAAAGGGCAGCTGGAGGAGAGACAGAAGATTGGCAAACTAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308482.14
ENST00000468950.5
ENST00000478958.5
ENST00000489603.5
CDS GCA 72 bp CCTCTGCATTTTATCATTGGGAAGGGCCAAATTACATaGACACTCAGTGCATGTATAAGAAGTCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: PLHFIIGKGQIT*TLSACIRSQGV
Trigger: TACTCCTTGACTTCTTATACATGCACTGAGTGTGCATGTAATTTGGCCCTTCCCAATGATAAAATGCAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS CCA 72 bp CAAACCACGCTGCAACACAAGATCTCACAGGCTTCATaGTTTAACATTATTAGCAATGTACAAACACCGAGA +
Preference number: 6 (lower is better)
Translates to: QTTLQHKISQAS*FNIISNVQTPR
Trigger: TCTCGGTGTTTGTACATTGCTAATAATGTTAAACCATGAAGCCTGTGAGATCTTGTGTTGCAGCGTGGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS CCA 72 bp GGACAAACAACCCATATGGACAAGAGAAGTGCTATTTaGAATGACTCAGTAATGCTCTTGTCTCTCAACAGT +
Preference number: 6 (lower is better)
Translates to: GQTTHMDKRSAI*NDSVMLLSLNS
Trigger: ACTGTTGAGAGACAAGAGCATTACTGAGTCATTCCAAATAGCACTTCTCTTGTCCATATGGGTTGTTTGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483443.1
CDS CAA 90 bp GCAATGTACAAACACCGAGAATCACAATTCAATAGCACCAACATTTaGAACAGCCTCGCCTTTCCGAGTTTACATCCCAGATGTATTTAT +
Preference number: 6 (lower is better)
Translates to: AMYKHRESQFNSTNI*NSLAFPSLHPRCIY
Trigger: ATAAATACATCTGGGATGTAAACTCGGAAAGGCGAGGCTGTTCAAAATGTTGGTGCTATTGAATTGTGATTCTCGGTGTTTGTACATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS TCA 72 bp TTAAGCCTATCAGTGGTAAAGAGATCTAATTATAACTaGTACAAGGAAAAGCGGCTGAAGGCAGACCTTACG +
Preference number: 6 (lower is better)
Translates to: LSLSVVKRSNYN*YKEKRLKADLT
Trigger: CGTAAGGTCTGCCTTCAGCCGCTTTTCCTTGTATCAGTTATAATTAGATCTCTTTACCACTGATAGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp AAACAACTTTGTTTAGCTGTAACAAAGAAACACCTGTaGGAGAGGGGTGCTGATCACCAAGAGTACAAAACT +
Preference number: 6 (lower is better)
Translates to: KQLCLAVTKKHL*ERGADHQEYKT
Trigger: AGTTTTGTACTCTTGGTGATCAGCACCCCTCTCTCACAGGTGTTTCTTTGTTACAGCTAAACAAAGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483443.1
CDS TCA 72 bp AACAACCCATATGGACAAGAGAAGTGCTATTTGGAATaGCTCAGTAATGCTCTTGTCTCTCAACAGTTAATC +
Preference number: 6 (lower is better)
Translates to: NNPYGQEKCYLE*LSNALVSQQLI
Trigger: GATTAACTGTTGAGAGACAAGAGCATTACTGAGTCATTCCAAATAGCACTTCTCTTGTCCATATGGGTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483443.1
CDS GCA 72 bp TCTATGTGGTCCCTAAGGATTAATAAAGCGAGTGGCTaGTTTGAGATTTATTTATTACTAGCGGTGAGATGT +
Preference number: 6 (lower is better)
Translates to: SMWSLRINKASG*FEIYLLLAVRC
Trigger: ACATCTCACCGCTAGTAATAAATAAATCTCAAAGCAGCCACTCGCTTTATTAATCCTTAGGGACCACATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS GCA 72 bp GCATGTATAAGAAGTCAAGGAGTAATAGGATTTAATTaGCACAGTGAAGAGAAACAAGCCTTCAGCTCTATG +
Preference number: 6 (lower is better)
Translates to: ACIRSQGVIGFN*HSEEKQAFSSM
Trigger: CATAGAGCTGAAGGCTTGTTTCTCTTCACTGTGGCAATTAAATCCTATTACTCCTTGACTTCTTATACATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp CCTACATACAAAAACTACAGGCGTCATAAGAAACACTaGATACACCAGAATGTGATCTTGAAGCTCAAGTAT +
Preference number: 6 (lower is better)
Translates to: PTYKNYRRHKKH*IHQNVILKLKY
Trigger: ATACTTGAGCTTCAAGATCACATTCTGGTGTATTCAGTGTTTCTTATGACGCCTGTAGTTTTTGTATGTAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478958.5
CDS TCA 72 bp TGTGATGTCTGGGCCTTGTCTACAGACTTTGTCAATTaGGCTTTGCATTTATTCTATTTTGGATCCATAAAT +
Preference number: 6 (lower is better)
Translates to: CDVWALSTDFVN*ALHLFYFGSIN
Trigger: ATTTATGGATCCAAAATAGAATAAATGCAAAGCTCAATTGACAAAGTCTGTAGACAAGGCCCAGACATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465870.5
CDS TCA 72 bp AAATGTACCAAATTCAATTCCATGGCTTTGGGTCTTTaGGACATCCTTATTAAACCTCATATGACTCAGGAT +
Preference number: 6 (lower is better)
Translates to: KCTKFNSMALGL*DILIKPHMTQD
Trigger: ATCCTGAGTCATATGAGGTTTAATAAGGATGTCTCAAAGACCCAAAGCCATGGAATTGAATTTGGTACATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483443.1