Pregenerated sensors for LRRD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000240720Ensembl transcript IDs: ENST00000343318.9, ENST00000437357.1, ENST00000458448.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTaGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACAGC | + |
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Preference number: 1 (lower is better) Translates to: GCVRSFFLLVGSWSR*LRSEAADLRSECYS Trigger: GCTGTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCCGAACACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 90 bp | CTGATGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGATCGTaGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LMFGCVRSFFLLVGS*SRWLRSEAADLRSE Trigger: CTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR TCA 90 bp | TCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATaGTATACCAAGACTAAAAGACTCATAACCTACCCGCAGAAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLLASSSRQTTTHCA*YTKTKRLITYPQKE Trigger: CTCTTTCTGCGGGTAGGTTATGAGTCTTTTAGTCTTGGTATATCATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 90 bp | AAACTGTTAATGGCCTGGCTTAAGTCAAATTGTGTCCGGAATTGGTaGGTTCTTCGTCTCACTGACTTCAAGTATGAAGCCGACCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: KLLMAWLKSNCVRNW*VLRLTDFKYEADPH Trigger: GTGAGGGTCGGCTTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATTTGACTTAAGCCAGGCCATTAACAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 90 bp | AAGAAACTGTTAATGGCCTGGCTTAAGTCAAATTGTGTCCGGAATTaGTGGGTTCTTCGTCTCACTGACTTCAAGTATGAAGCCGACCCT | + |
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Preference number: 1 (lower is better) Translates to: KKLLMAWLKSNCVRN*WVLRLTDFKYEADP Trigger: AGGGTCGGCTTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATTTGACTTAAGCCAGGCCATTAACAGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR TCA 90 bp | TTCCATTCAAAGTTATGGAAACCCAGGTCACACTCCTTAAGTGGGTaGAAAGTAAAAAGTGCAGAAGTATGGGGATTGAGGATCAGACAA | + |
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Preference number: 1 (lower is better) Translates to: FHSKLWKPRSHSLSG*KVKSAEVWGLRIRQ Trigger: TTGTCTGATCCTCAATCCCCATACTTCTGCACTTTTTACTTTTCACCCACTTAAGGAGTGTGACCTGGGTTTCCATAACTTTGAATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATCTTCTGGTGGGATCGTaGTCTCGCTGGCTCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VLSLSWHPALGRLLHTVHLLVGS*SRWLRS Trigger: ACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAG...ATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCGCAGAAAGAGTGCATCTTCCATAGTAGCTCTGCAAAAAGATCCAAAAGAATGTGTCCGGAATTGGTaGGTTCTTCGTCTCACTGAC | + |
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Preference number: 2 (lower is better) Translates to: TRRKSASSIVALQKDPKECVRNW*VLRLTD Trigger: GTCAGTGAGACGAAGAACCCACCAATTCCGGACACA...TTCTTTTGGATCTTTTTGCAGAGCTACTATGGAAGATGCACTCTTTCTGCGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTGTTCTGTCTCTCTCTTaGCATCCAGCTCTCGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSVLSLS*HPALGR Trigger: TCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CCA 90 bp | AACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTAAACTGTTAATGGCCTaGCTTAAGTCAAATTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: NKVLSLSWHPALGRLLHTKLLMA*LKSNCV Trigger: GACACAATTTGACTTAAGCCAGGCCATTAACAGTTT...AGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR TCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTCAGAAGTATGGGGATTaGGGATCAGACAACATAAAC | + |
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Preference number: 2 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSQKYGD*GSDNIN Trigger: GTTTATGTTGTCTGATCCTCAATCCCCATACTTCTG...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | CGGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTaGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: RSFFLLVGSWSR*LRSEAADLRSE Trigger: CTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | GGATGTGTTCGGAGTTTCTTCCTTCTGGTGGGATCGTaGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTT | + |
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Preference number: 3 (lower is better) Translates to: GCVRSFFLLVGS*SRWLRSEAADL Trigger: AAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCCGAACACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CAA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTAGCGGCGCGTCTGGAGTaGTTCCTTTCTCCCGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: NINKVLSLSWHPALGRLLAARLE*FLSPGG Trigger: CCCACCGGGAGAAAGGAACAACTCCAGACGCGCCGC...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | AGCCGACCCTCACGGTCAGTGTTACAGCTCTTAAGATaGCGCCTCTGGAGTTTGTTCCTTCTGATGTTCGGA | + |
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Preference number: 3 (lower is better) Translates to: SRPSRSVLQLLR*RLWSLFLLMFG Trigger: TCCGAACATCAGAAGGAACAAACTCCAGAGGCGCCATCTTAAGAGCTGTAACACTGACCGTGAGGGTCGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CAA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTATGGCGCCTCTGGAGTTaGTTCCTTCTGATGTTCGGA | + |
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Preference number: 3 (lower is better) Translates to: NINKVLSLSWHPALGRLLWRLWS*FLLMFG Trigger: TCCGAACATCAGAAGGAACAAACTCCAGAGGCGCCA...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | GGATCAGACAACATAAACAAGGTTCTGTCTCTCTCTTaGCATCCAGCTCTCGGCAGACTACTACACACTGTG | + |
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Preference number: 3 (lower is better) Translates to: GSDNINKVLSLS*HPALGRLLHTV Trigger: CACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTTGTCTGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR-3UTR CAA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTGGTTCTGTCTCTCTCTaGGCATCCAGCTCTCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSGSVSL*ASSSRQ Trigger: CTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACC...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR TCA 72 bp | GCATCCAGCTCTCGGCAGACTACTACACACTGTGCATaGTATACCAAGACTAAAAGACTCATAACCTACCCG | + |
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Preference number: 3 (lower is better) Translates to: ASSSRQTTTHCA*YTKTKRLITYP Trigger: CGGGTAGGTTATGAGTCTTTTAGTCTTGGTATATCATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | ATGGCCTGGCTTAAGTCAAATTGTGTCCGGAATTGGTaGGTTCTTCGTCTCACTGACTTCAAGTATGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: MAWLKSNCVRNW*VLRLTDFKYEA Trigger: GGCTTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATTTGACTTAAGCCAGGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CCA 72 bp | TTAATGGCCTGGCTTAAGTCAAATTGTGTCCGGAATTaGTGGGTTCTTCGTCTCACTGACTTCAAGTATGAA | + |
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Preference number: 3 (lower is better) Translates to: LMAWLKSNCVRN*WVLRLTDFKYE Trigger: TTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATTTGACTTAAGCCAGGCCATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACCGCCTCTCCGGGCCGTaGCTCCTCTTTCCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SWSRWLRSEAADLRSECYRLSGP*LLFPRP Trigger: CGGCCTGGGAAAGAGGAGCCACGGCCCGGAGAGGCG...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACGGGGGCGCGCGCGGTTaGGTCCAGCAATTGCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SWSRWLRSEAADLRSECYGGARG*VQQLRG Trigger: TCCTCGCAATTGCTGGACTCAACCGCGCGCGCCCCC...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | TTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGACCCGCGCTGGCCGCTaGAGGCGGGTGGAGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: FCLSLGIQLSADYYTLCMTRAGR*RRVENG Trigger: CCCGTTCTCCACCCGCCTGCAGCGGCCAGCGCGGGT...CATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | CCTGGCTTAAGTCAAATTGTGTCCGGAATTGGTGGGTTCTTCGTCTCACTGACTGGCGCAGCCCAGCACTaGCGCCTCTCCGGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: PGLSQIVSGIGGFFVSLTGAAQH*RLSGPW Trigger: CCACGGCCCGGAGAGGCGTCAGTGCTGGGCTGCGCC...AGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATTTGACTTAAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACGGCCATCGGTCACACTaGGATACTCGAGGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: SWSRWLRSEAADLRSECYGHRSH*DTRGGG Trigger: GCCTCCTCCTCGAGTATCCCAGTGTGACCGATGGCC...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACCCGAGTCCATCTTGGTaGGATTGTCTTGCTCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: SWSRWLRSEAADLRSECYPSPSW*DCLAPR Trigger: CCTCGGAGCAAGACAATCCCACCAAGATGGACTCGG...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| 3UTR CAA 72 bp | GTGAGTGTTACAGCTCTTAAGGCGGCGCGTCTGGAGTaGTTCCTTTCTCCCGGTGGGTTCCTGGTCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSVTALKAARLE*FLSPGGFLVLL Trigger: CAGCAAGACCAGGAACCCACCGGGAGAAAGGAACAACTCCAGACGCGCCGCCTTAAGAGCTGTAACACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | GTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATCTCGAGGAGGAGGCCTaGGGCCTGCATTCAATTCCC | + |
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Preference number: 4 (lower is better) Translates to: VLSLSWHPALGRLLHTVHLEEEA*GLHSIP Trigger: GGGAATTGAATGCAGGCCCCAGGCCTCCTCCTCGAG...ATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGTGCTGGCTTCAAGAGTaGAGCTGCAGACCATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLCWLQE*SCRPSL Trigger: AAGAGATGGTCTGCAGCTTCACTCTTGAAGCCAGCA...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGCTTCTGGTGGGATCGTaGTCTCGCTGGCTCAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FCLSLGIQLSADYYTLCMLLVGS*SRWLRS Trigger: ACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAG...CATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACCCACTGCGCGTTTGTaGGCTGGCCATCGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: NINKVLSLSWHPALGRLLPTARL*AGHRSH Trigger: GTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGG...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | ACCCGCAGAAAGAGTGCATCTTCCATAGTAGCTCTGCAAAAAGATCCAAAAGAACGCGGCCGCACCCACTaGGCGTTTGTGAGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TRRKSASSIVALQKDPKERGRTH*AFVSWP Trigger: TGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCG...TTCTTTTGGATCTTTTTGCAGAGCTACTATGGAAGATGCACTCTTTCTGCGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | GTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGCCACCTTAGCTCACTaGAAGCTCTGCCTCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VLSLSWHPALGRLLHTVHATLAH*KLCLLS Trigger: ACTCAGGAGGCAGAGCTTGCAGTGAGCTAAGGTGGC...ATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGTACCCGCAGAAAGAGTaGATCTTCCATAGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLYPQKE*IFHSSS Trigger: AGAGCTACTATGGAAGATGCACTCTTTCTGCGGGTA...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | AACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGCTCACTGCAAGCTCTaGCTCCTGAGTTCACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NKVLSLSWHPALGRLLHTAHCKL*LLSSRH Trigger: ATGGCGTGAACTCAGGAGGCAGAGCTTGCAGTGAGC...AGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGGGAGAATTACTAGTCTaGATTCTGGTCCTCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLGELLV*ILVLRG Trigger: ACCTCTGAGGACCAGAATCCAGACTAGTAATTCTCC...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGAATTGTGTCCGGAATTaGTGGGTTCTTCGTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLNCVRN*WVLRLT Trigger: AGTGAGACGAAGAACCCACCAATTCCGGACACAATT...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | AACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTAACCCGAGTCCATCTTaGTGGGATTGTCTTGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: NKVLSLSWHPALGRLLHTNPSPS*WDCLAP Trigger: CGGAGCAAGACAATCCCACCAAGATGGACTCGGGTT...AGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACTCCCGGTGGGTTCCTaGTCTTGCTGGCTTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: NINKVLSLSWHPALGRLLLPVGS*SCWLQE Trigger: CTCTTGAAGCCAGCAAGACCAGGAACCCACCGGGAG...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGTTCCATTCAAAGTTATaGAAACCCAGGTCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLFHSKL*KPRSHS Trigger: GGAGTGTGACCTGGGTTTCCATAACTTTGAATGGAA...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | AACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTTGTGTCCGGAATTGGTaGGTTCTTCGTCTCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: NKVLSLSWHPALGRLLHTCVRNW*VLRLTD Trigger: GTCAGTGAGACGAAGAACCCACCAATTCCGGACACA...AGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACCACTTTAATGTTCTATaGAAGTACCTTGCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SWSRWLRSEAADLRSECYHFNVL*KYLASS Trigger: ACTGGAGGCAAGGTACTTCCATAGAACATTAAAGTG...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGACTACACACTGTGCATaGTATACCAAGACTAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLTTHCA*YTKTKR Trigger: TCTTTTAGTCTTGGTATATCATGCACAGTGTGTAGT...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR TCA 90 bp | GTTCGGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAACACTCCTTAAGTGGGTaGAAAGTAAAAAGTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VRSFFLLVGSWSRWLRSEHSLSG*KVKSAE Trigger: TTCTGCACTTTTTACTTTTCACCCACTTAAGGAGTG...TTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCCGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTGTTGAGTCCAGCAATTaGGAGGACCTCCGCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSVESSN*EDLRRR Trigger: GCGCCTGCGGAGGTCCTCGCAATTGCTGGACTCAAC...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTAGGCATGAGCCACCCTaGCCGGGCTCCACAATATTC | + |
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Preference number: 4 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSRHEPP*PGSTIF Trigger: GAATATTGTGGAGCCCGGGCAGGGTGGCTCATGCCT...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
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| CDS-3UTR GCA 90 bp | ACCCGCAGAAAGAGTGCATCTTCCATAGTAGCTCTGCAAAAAGATCCAAAAGAATTGCCCAGGATGGAGTaGAGTGGTGCCACCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRRKSASSIVALQKDPKELPRME*SGATLA Trigger: AGCTAAGGTGGCACCACTGCACTCCATCCTGGGCAA...TTCTTTTGGATCTTTTTGCAGAGCTACTATGGAAGATGCACTCTTTCTGCGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTTGCGCGTTTGTGAGCTaGCCATCGGTCACACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSCAFVS*PSVTLG Trigger: TCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCA...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGTTTACAGATTTCCACTaGAGGTCTCAGCAAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FCLSLGIQLSADYYTLCMFTDFH*RSQQRV Trigger: AACCCTTTGCTGAGACCTCCAGTGGAAATCTGTAAA...CATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTTGTTCCTTCTGATGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGAACGAGCAGCCGGGATaGAGAATTACTAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLFLLMFGCVRSFFLLVNEQPG*RITSLD Trigger: ATCCAGACTAGTAATTCTCCATCCCGGCTGCTCGTT...CACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAGAAGGAACAAACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| 3UTR CAA 72 bp | AGGATCAGACAACATAAACAAGGTTCTGTCTCTCTCTaGGCATCCAGCTCTCGGCAGACTACTACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIRQHKQGSVSL*ASSSRQTTTHC Trigger: ACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTTGTCTGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGCCACTCAGGTTTAGTTaGTGCAGATCATTTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCLSLGIQLSADYYTLCMPLRFS*CRSFKD Trigger: ATCTTTAAATGATCTGCAGCAACTAAACCTGAGTGG...CATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | AACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTCACACTCCTTAAGTaGGTGAAAAGTAAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKVLSLSWHPALGRLLHTVTLLK*VKSKKC Trigger: GCACTTTTTACTTTTCACCCACTTAAGGAGTGTGAC...AGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR TCA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACAGAAGTATGGGGATTaGGGATCAGACAACATAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NINKVLSLSWHPALGRLLQKYGD*GSDNIN Trigger: GTTTATGTTGTCTGATCCTCAATCCCCATACTTCTG...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR GCA 90 bp | GTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATAAACCAATGTTATGTTaGACTTCCAAAATGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLSLSWHPALGRLLHTVHKPMLC*TSKMAT Trigger: TGTTGCCATTTTGGAAGTGCAACATAACATTGGTTT...ATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | AGGATCAGACAACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGAAAAGTGCAGAAGTATaGGGATTGAGGATCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RIRQHKQGSVSLLASSSRKSAEV*GLRIRQ Trigger: TTGTCTGATCCTCAATCCCCATACTTCTGCACTTTT...CCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTTGTCTGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR GCA 90 bp | AACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACTCAGGTTTAGTTGCTaGAGATCATTTAAAGATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NINKVLSLSWHPALGRLLLRFSC*RSFKDS Trigger: GCTATCTTTAAATGATCTGCAGCAACTAAACCTGAG...TAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CCA 90 bp | CCGGGCTCCACAATATTCTTAACCACTTGTATTAGGTCTCTTTCCATTCAAAGTAAACTGTTAATGGCCTaGCTTAAGTCAAATTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSTIFLTTCIRSLSIQSKLLMA*LKSNCV Trigger: GACACAATTTGACTTAAGCCAGGCCATTAACAGTTT...ACTTTGAATGGAAAGAGACCTAATACAAGTGGTTAAGAATATTGTGGAGCCCGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 90 bp | CGGGCCGTGGCTCCTCTTTCCCAGGCCGAAAGCGGCCGGGCCCTCTaGTCCGCTGCGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RAVAPLSQAESGRAL*SAAPWRGRTHCAFV Trigger: CACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGCCTGGGAAAGAGGAGCCACGGCCCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 90 bp | GGCTCCTCTTTCCCAGGCCGAAAGCGGCCGGGCCCTCTGCTCCGCTaGGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGTGAGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSSFPGRKRPGPLLR*ALARPHPLRVCELA Trigger: GGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGCCTGGGAAAGAGGAGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 90 bp | CTTTCCCAGGCCGAAAGCGGCCGGGCCCTCTGCTCCGCTGCGCCCTaGCGCGGCCGCACCCACTGCGCGTTTGTGAGCTGGCCATCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSQAESGRALCSAAP*RGRTHCAFVSWPSV Trigger: GACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGCCTGGGAAAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 90 bp | GGCGGCTGCGGCTCCTTCGCAGGACCGGTAGGGGGCGCGCGCGGTTaGGTCCAGCAATTGCGAGGACCTCCGCAGGCGCAGCCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GGCGSFAGPVGGARG*VQQLRGPPQAQPST Trigger: AGTGCTGGGCTGCGCCTGCGGAGGTCCTCGCAATTGCTGGACTCAACCGCGCGCGCCCCCTACCGGTCCTGCGAAGGAGCCGCAGCCGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000343318.9 ENST00000437357.1 ENST00000458448.6 |
||
| CDS GCA 90 bp | GGCCGGGCCCTCTGCTCCGCTGCGCCCTGGCGCGGCCGCACCCACTaGGCGTTTGTGAGCTGGCCATCGGTCACACTGGGATACTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRALCSAAPWRGRTH*AFVSWPSVTLGYSR Trigger: CCTCGAGTATCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 90 bp | TCCGCTGCGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGTGAGCTaGCCATCGGTCACACTGGGATACTCGAGGAGGAGGCCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAAPWRGRTHCAFVS*PSVTLGYSRRRPGA Trigger: GGCCCCAGGCCTCCTCCTCGAGTATCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 90 bp | TCTGCTCCGCTGCGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGTaGGCTGGCCATCGGTCACACTGGGATACTCGAGGAGGAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAPLRPGAAAPTARL*AGHRSHWDTRGGGL Trigger: CAGGCCTCCTCCTCGAGTATCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 90 bp | TGGCCATCGGTCACACTGGGATACTCGAGGAGGAGGCCTGGGGCCTaGATTCAATTCCCTAAGAGGGACCCGCGCTGGCCGCTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WPSVTLGYSRRRPGA*IQFPKRDPRWPLQA Trigger: CGCCTGCAGCGGCCAGCGCGGGTCCCTCTTAGGGAATTGAATGCAGGCCCCAGGCCTCCTCCTCGAGTATCCCAGTGTGACCGATGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 90 bp | AGGAGGCCTGGGGCCTGCATTCAATTCCCTAAGAGGGACCCGCGCTaGCCGCTGCAGGCGGGTGGAGAACGGGCGTCTGAGTCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRPGACIQFPKRDPR*PLQAGGERASESLA Trigger: AGCCAAAGACTCAGACGCCCGTTCTCCACCCGCCTGCAGCGGCCAGCGCGGGTCCCTCTTAGGGAATTGAATGCAGGCCCCAGGCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | TCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCGCAGTGAGTGTTACGGTTCTGTCTCTCTCTaGGCATCCAGCTCTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SWSRWLRSEAADLRSECYGSVSL*ASSSRQ Trigger: CTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAACC...GTAACACTCACTGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTTTCTTCCTTCTGGTGGGATCGTGGTCTCGCTGGCTCAGGAGTGAAGCTGCAACCCGAGTCCATCTaGGTGGGATTGTCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSSFWWDRGLAGSGVKLQPESI*VGLSCS Trigger: GGAGCAAGACAATCCCACCAAGATGGACTCGGGTTG...CAGCTTCACTCCTGAGCCAGCGAGACCACGATCCCACCAGAAGGAAGAAACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTTGTTCCTTCTGATGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGAGGGGGCGCGCGCGGTaGAGTCCAGCAATTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSLFLLMFGCVRSFFLLVRGRAR*SPAIAR Trigger: CCTCGCAATTGCTGGACTCAACCGCGCGCGCCCCCT...CACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAGAAGGAACAAACTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTTGTTCCTTCTGATGTTCGGATGTGTTCGGAGTTTCTTCCTTCTGGTGGCGGCGCGTCTGGAGTaGTTCCTTTCTCCCGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WSLFLLMFGCVRSFFLLVAARLE*FLSPGG Trigger: CCCACCGGGAGAAAGGAACAACTCCAGACGCGCCGC...CACCAGAAGGAAGAAACTCCGAACACATCCGAACATCAGAAGGAACAAACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 90 bp | CGGTCCGGGCATCTAACGAGCAGCCGGGATGGAGAATTACTAGTCTaGATTCTGGTCCTCAGAGGTTCACTCACGTTAATCAACCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSGHLTSSRDGELLV*ILVLRGSLTLINPS Trigger: ACTCGGGTTGATTAACGTGAGTGAACCTCTGAGGACCAGAATCCAGACTAGTAATTCTCCATCCCGGCTGCTCGTTAGATGCCCGGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | TTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGTGGCGCCTCTGGAGTTaGTTCCTTCTGATGTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: FCLSLGIQLSADYYTLCMWRLWS*FLLMFG Trigger: TCCGAACATCAGAAGGAACAAACTCCAGAGGCGCCA...CATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTGTCCGGAATTGGTGGGTTCTTCGTCTCACTGACTTCAAGTATGAAGCCGGTGGGTTCCTGGTCTaGCTGGCTTCAAGAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCVRNWWVLRLTDFKYEAGGFLV*LASRVK Trigger: CTTCACTCTTGAAGCCAGCAAGACCAGGAACCCACC...GGCTTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | GTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGCAGACTACTACACACTGTGCATGGTCTCAGCAAAGGGTaGTCATCAAAATTTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSLSWHPALGRLLHTVHGLSKG*SSKFIS Trigger: GGAGATAAATTTTGATGACAACCCTTTGCTGAGACC...ATGCACAGTGTGTAGTAGTCTGCCGAGAGCTGGATGCCAAGAGAGAGACAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | AGGATCAGACAACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGAAATTGTGTCCGGAATaGGTGGGTTCTTCGTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RIRQHKQGSVSLLASSSRKLCPE*VGSSSH Trigger: GTGAGACGAAGAACCCACCAATTCCGGACACAATTT...CCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTTGTCTGATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | AGGATCAGACAACATAAACAAGGTTCTGTCTCTCTCTTGGCATCCAGCTCTCGGGCAGAAGTATGGGGATaGAGGATCAGACAACATAAA | + |
|
Preference number: 5 (lower is better) Translates to: RIRQHKQGSVSLLASSSRAEVWG*RIRQHK Trigger: TTTATGTTGTCTGATCCTCAATCCCCATACTTCTGC...CCGAGAGCTGGATGCCAAGAGAGAGACAGAACCTTGTTTATGTTGTCTGATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS-3UTR CAA 90 bp | AATTGTGTCCGGAATTGGTGGGTTCTTCGTCTCACTGACTTCAAGTATGAAGCCTTCTATGGAAGTACCTaGCCTCCAGTGGAAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: NCVRNWWVLRLTDFKYEAFYGST*PPVENI Trigger: AATGTTTTCCACTGGAGGCAAGGTACTTCCATAGAA...GGCTTCATACTTGAAGTCAGTGAGACGAAGAACCCACCAATTCCGGACACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 72 bp | GCTCCTCTTTCCCAGGCCGAAAGCGGCCGGGCCCTCTaGTCCGCTGCGCCCTGGCGCGGCCGCACCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: APLSQAESGRAL*SAAPWRGRTHC Trigger: GCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGCCTGGGAAAGAGGAGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 72 bp | GCCGAAAGCGGCCGGGCCCTCTGCTCCGCTGCGCCCTaGCGCGGCCGCACCCACTGCGCGTTTGTGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AESGRALCSAAP*RGRTHCAFVSW Trigger: CCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 72 bp | TTCCCAGGCCGAAAGCGGCCGGGCCCTCTGCTCCGCTaGGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FPGRKRPGPLLR*ALARPHPLRVC Trigger: ACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAGGGCCCGGCCGCTTTCGGCCTGGGAA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 72 bp | ACACCCTTCGCTTCACCTGTGGCCTCCCGCGGCGGCTaGGGCTCCTTCGCAGGACCGGTAGGGGGCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TPFASPVASRGG*GSFAGPVGGAR Trigger: GCGCGCGCCCCCTACCGGTCCTGCGAAGGAGCCGCAGCCGCCGCGGGAGGCCACAGGTGAAGCGAAGGGTGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437357.1 |
||
| CDS CAA 90 bp | CGGCGGCTGCGGCTCCTTCGCAGGACCGGTAGGGGGCGCGCGCGGTaGAGTCCAGCAATTGCGAGGACCTCCGCAGGCGCAGCCCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRLRLLRRTGRGRAR*SPAIARTSAGAAQH Trigger: GTGCTGGGCTGCGCCTGCGGAGGTCCTCGCAATTGCTGGACTCAACCGCGCGCGCCCCCTACCGGTCCTGCGAAGGAGCCGCAGCCGCCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000343318.9 ENST00000437357.1 ENST00000458448.6 |
||
| CDS GCA 72 bp | CTGGAAGTCTTGTTAGCTGTGGCCTCCCGCGGCGGCTaGGGCTCCTTCGCAGGACCGGTAGGGGGCGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LEVLLAVASRGG*GSFAGPVGGAR Trigger: GCGCGCGCCCCCTACCGGTCCTGCGAAGGAGCCGCAGCCGCCGCGGGAGGCCACAGCTAACAAGACTTCCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 72 bp | GGCTCCTTCGCAGGACCGGTAGGGGGCGCGCGCGGTTaGGTCCAGCAATTGCGAGGACCTCCGCAGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSFAGPVGGARG*VQQLRGPPQAQ Trigger: CTGCGCCTGCGGAGGTCCTCGCAATTGCTGGACTCAACCGCGCGCGCCCCCTACCGGTCCTGCGAAGGAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000343318.9 ENST00000437357.1 ENST00000458448.6 |
||
| CDS GCA 72 bp | CTCTGCTCCGCTGCGCCCTGGCGCGGCCGCACCCACTaGGCGTTTGTGAGCTGGCCATCGGTCACACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LCSAAPWRGRTH*AFVSWPSVTLG Trigger: TCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAGCGGAGCAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 72 bp | CTGCGCCCTGGCGCGGCCGCACCCACTGCGCGTTTGTaGGCTGGCCATCGGTCACACTGGGATACTCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRPGAAAPTARL*AGHRSHWDTRG Trigger: TCCTCGAGTATCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGGCGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 72 bp | GGGGCCTGCATTCAATTCCCTAAGAGGGACCCGCGCTaGCCGCTGCAGGCGGGTGGAGAACGGGCGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GACIQFPKRDPR*PLQAGGERASE Trigger: CTCAGACGCCCGTTCTCCACCCGCCTGCAGCGGCCAGCGCGGGTCCCTCTTAGGGAATTGAATGCAGGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 72 bp | CCCTGGCGCGGCCGCACCCACTGCGCGTTTGTGAGCTaGCCATCGGTCACACTGGGATACTCGAGGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWRGRTHCAFVS*PSVTLGYSRRR Trigger: CCTCCTCCTCGAGTATCCCAGTGTGACCGATGGCCAGCTCACAAACGCGCAGTGGGTGCGGCCGCGCCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 72 bp | GCGCTGGCCGCTGCAGGCGGGTGGAGAACGGGCGTCTaGGTCTTTGGCTTTCGTACCGGAATCTCCCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALAAAGGWRTGV*VFGFRTGISPG Trigger: TCCCGGGGAGATTCCGGTACGAAAGCCAAAGACTCAGACGCCCGTTCTCCACCCGCCTGCAGCGGCCAGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 72 bp | CGCTGCAGGCGGGTGGAGAACGGGCGTCTGAGTCTTTaGCTTTCGTACCGGAATCTCCCCGGGAGATTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: RCRRVENGRLSL*LSYRNLPGRFY Trigger: GTAAAATCTCCCGGGGAGATTCCGGTACGAAAGCCAAAGACTCAGACGCCCGTTCTCCACCCGCCTGCAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS TCA 72 bp | CTCCCGGTGGGTTCCTGGTCTTGCTGGCTTCAAGAGTaGAGCTGCAGACCATCTCTTTCATCTGCCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPVGSWSCWLQE*SCRPSLSSALC Trigger: ACAGAGGGCAGATGAAAGAGATGGTCTGCAGCTTCACTCTTGAAGCCAGCAAGACCAGGAACCCACCGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS CCA 72 bp | CATCTAACGAGCAGCCGGGATGGAGAATTACTAGTCTaGATTCTGGTCCTCAGAGGTTCACTCACGTTAATC | + |
|
Preference number: 6 (lower is better) Translates to: HLTSSRDGELLV*ILVLRGSLTLI Trigger: GATTAACGTGAGTGAACCTCTGAGGACCAGAATCCAGACTAGTAATTCTCCATCCCGGCTGCTCGTTAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000343318.9 |
||
| CDS GCA 72 bp | GGTAGAGCTGTCAGATTATTTCCACTCAGGTTTAGTTaGTGCAGATCATTTAAAGATAGCAAAGATGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GRAVRLFPLRFS*CRSFKDSKDGG Trigger: TCCACCATCTTTGCTATCTTTAAATGATCTGCAGCAACTAAACCTGAGTGGAAATAATCTGACAGCTCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343318.9 ENST00000458448.6 |
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| CDS GCA 72 bp | AGAGCTGTCAGATTATTTCCACTCAGGTTTAGTTGCTaGAGATCATTTAAAGATAGCAAAGATGGTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RAVRLFPLRFSC*RSFKDSKDGGR Trigger: TCTTCCACCATCTTTGCTATCTTTAAATGATCTGCAGCAACTAAACCTGAGTGGAAATAATCTGACAGCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343318.9 ENST00000458448.6 |
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| CDS TCA 72 bp | TCATATGCTCCTATCATAGTTAGTGCTCGAATTAGTTaGTCTCTTAAAGCAGCAGCAGTTAGTGATAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SYAPIIVSARIS*SLKAAAVSDNL Trigger: CAAGTTATCACTAACTGCTGCTGCTTTAAGAGATCAACTAATTCGAGCACTAACTATGATAGGAGCATATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458448.6 |
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| CDS CCA 72 bp | TTGTTACTTTGTGTTTTCCATATAACAAGTGCTTGGTaGGCTCTCTCACTTAATGAAACAGTGCTCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: LLLCVFHITSAW*ALSLNETVLFV Trigger: TACAAAGAGCACTGTTTCATTAAGTGAGAGAGCCCACCAAGCACTTGTTATATGGAAAACACAAAGTAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458448.6 |
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| CDS CCA 72 bp | AACTTGTTACTTTGTGTTTTCCATATAACAAGTGCTTaGTGGGCTCTCTCACTTAATGAAACAGTGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: NLLLCVFHITSA*WALSLNETVLF Trigger: AAAGAGCACTGTTTCATTAAGTGAGAGAGCCCACCAAGCACTTGTTATATGGAAAACACAAAGTAACAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458448.6 |
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