RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC9 (Homo sapiens)

Ensembl gene IDs: ENSG00000131951

Ensembl transcript IDs: ENST00000254271.8, ENST00000445360.5, ENST00000454474.2, ENST00000568404.1, ENST00000570145.1, ENST00000644811.1, ENST00000647410.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCCATAGGAGAGTGGGTAACAGGAATA +
Preference number: 1 (lower is better)
Translates to: LGRSTFVISMGGVFT*PNDLPSIGEWVTGI
Trigger: TATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
3UTR CCA 90 bp GGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTT +
Preference number: 1 (lower is better)
Translates to: GEILIPLSCRKAISA*MLRGLFVRIPAFLF
Trigger: AAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR TCA 90 bp CTGTCATTAAATGATCGGATGCGGTTATGGTCCACTACCAATTCTTaGAGGACTACTAAGTTGTCAAGCCCTTCAACTTGGCTGATTTCA +
Preference number: 1 (lower is better)
Translates to: LSLNDRMRLWSTTNS*RTTKLSSPSTWLIS
Trigger: TGAAATCAGCCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATAACCGCATCCGATCATTTAATGACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 90 bp AAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGAGTGGGTAACAGGAATAAGCGAGTT +
Preference number: 1 (lower is better)
Translates to: KYICYLYGRSFHLAK*SAIHRRVGNRNKRV
Trigger: AACTCGCTTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 90 bp GTAACAGGAATAAGCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTATCATCTGAATTCACAGGACTTCCA +
Preference number: 1 (lower is better)
Translates to: VTGISEFFFACSSAR*NSAFALSSEFTGLP
Trigger: TGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGCTTATTCCTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR CCA 90 bp GGAGGAGTTTTCACTTGGCCAAATGATCTGCCATCCATAGGAGAGTaGGTAACAGGAATAAGATCAAAGATTCATTTATATTCTCTACCG +
Preference number: 1 (lower is better)
Translates to: GGVFTWPNDLPSIGE*VTGIRSKIHLYSLP
Trigger: CGGTAGAGAATATAAATGAATCTTTGATCTTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568404.1
3UTR TCA 90 bp CAATATTCTGATGTGATAAAAGAGATGGAGAGATACTTATCCCTCTaGGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTAT +
Preference number: 1 (lower is better)
Translates to: QYSDVIKEMERYLSL*VAEKLFLHGCSEDY
Trigger: ATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTTATCACATCAGAATATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR TCA 90 bp TCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGC +
Preference number: 1 (lower is better)
Translates to: SWLLWYICAVGDAIF*CDKRDGEILIPLSC
Trigger: GCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTTATCACATCAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR TCA 90 bp AAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGAGTGGGTAACAGGAATAAGATCAAA +
Preference number: 1 (lower is better)
Translates to: KYICYLYGRSFHLAK*SAIHRRVGNRNKIK
Trigger: TTTGATCTTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568404.1
3UTR CCA 90 bp CTTCCATCTAACATCTGTAAGTTAGGCAGTCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTACAAATTCACTGGATTGCCATACAC +
Preference number: 1 (lower is better)
Translates to: LPSNICKLGSRNISM*RCSIFLQIHWIAIH
Trigger: GTGTATGGCAATCCAGTGAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTTAGATGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR GCA 90 bp TATATCCTAGGAAGAGTTTCTCTAGTTTTACCAAAGATTGTAATTTaGCCAGTTCTCGTAGTCTGTTTTCCTCCAAGTGAAGTGCCAATA +
Preference number: 1 (lower is better)
Translates to: YILGRVSLVLPKIVI*PVLVVCFPPSEVPI
Trigger: TATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGGGCAAATTACAATCTTTGGTAAAACTAGAGAAACTCTTCCTAGGATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 90 bp TTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTT +
Preference number: 1 (lower is better)
Translates to: FLGVCSFLFRQLHSI*SWKVAPKNSSLILV
Trigger: AACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR-3UTR TCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGCTGTCCATAGCCACTTaGAGGCACTTTCTGGTACAG +
Preference number: 2 (lower is better)
Translates to: SELPKSYFCMDAPRIICQLSIAT*RHFLVQ
Trigger: CTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAG...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR TCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAGCACTGTCATTAAATaGTCGGATGCGGTTATGGTC +
Preference number: 2 (lower is better)
Translates to: SELPKSYFCMDAPRIICQSTVIK*SDAVMV
Trigger: GACCATAACCGCATCCGATCATTTAATGACAGTGCT...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CCA 90 bp TTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTCCATCCATAGGAGAGTaGGTAACAGGAATAAGCGAG +
Preference number: 2 (lower is better)
Translates to: FLHGCSEDYLSESQHSCFPSIGE*VTGISE
Trigger: CTCGCTTATTCCTGTTACCCACTCTCCTATGGATGG...AAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGCCATCCATAGGAGAGTaGGTAACAGGAATAAGATCA +
Preference number: 2 (lower is better)
Translates to: SELPKSYFCMDAPRIICQPSIGE*VTGIRS
Trigger: TGATCTTATTCCTGTTACCCACTCTCCTATGGATGG...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568404.1
3UTR CAA 90 bp GCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCACAGGACTTCCATCTAACATCTGTA +
Preference number: 2 (lower is better)
Translates to: ASFSLLVVQRGEIQL*PYHLNSQDFHLTSV
Trigger: TACAGATGTTAGATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CCA 90 bp AGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTTCTAAATTGGTCGACTaGAATCAAATCCACTGTTCT +
Preference number: 2 (lower is better)
Translates to: SYFCMDAPRIICQNPSILSKLVD*NQIHCS
Trigger: AGAACAGTGGATTTGATTCCAGTCGACCAATTTAGA...AAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTaGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGAT +
Preference number: 2 (lower is better)
Translates to: PLSASFCTTTKQVSF*VYAHFSLGSYIRFD
Trigger: ATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000644811.1
3UTR-3UTR CCA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGACAGTAGTTGTCTACTaGTTAAGTGAGTCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKTVVVY*LSESEA
Trigger: AGCCTCAGACTCACTTAACCAGTAGACAACTACTGT...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CCA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCTACAAATTCACTaGATTGCCATACACTGTAAG +
Preference number: 2 (lower is better)
Translates to: VMAESTRQKYICYLYGRSFLQIH*IAIHCK
Trigger: CTTACAGTGTATGGCAATCCAGTGAATTTGTAGAAA...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR TCA 90 bp CTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGATGCTGAATGAGGTAAGATaGTTGTTCTGTAGATTCACA +
Preference number: 2 (lower is better)
Translates to: LILVALVYLCSRRCNILMLNEVR*LFCRFT
Trigger: TGTGAATCTACAGAACAATCATCTTACCTCATTCAG...CATCAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR CCA 72 bp CTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTTGTCAGAATCCCAGCA +
Preference number: 3 (lower is better)
Translates to: LIPLSCRKAISA*MLRGLFVRIPA
Trigger: TGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR TCA 72 bp AATGATCGGATGCGGTTATGGTCCACTACCAATTCTTaGAGGACTACTAAGTTGTCAAGCCCTTCAACTTGG +
Preference number: 3 (lower is better)
Translates to: NDRMRLWSTTNS*RTTKLSSPSTW
Trigger: CCAAGTTGAAGGGCTTGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGACCATAACCGCATCCGATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 72 bp TGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGAGTGGGTAACAGGAAT +
Preference number: 3 (lower is better)
Translates to: CYLYGRSFHLAK*SAIHRRVGNRN
Trigger: ATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
3UTR-3UTR CAA 90 bp ACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTGCTGTCCATAGCCACTaGAAGGCACTTTCTGGTACA +
Preference number: 3 (lower is better)
Translates to: TTTKQVSFLVYAHFSLGSAVHSH*KALSGT
Trigger: TGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGC...ACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR CCA 72 bp AGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCCATAGGAGAGTGGGTA +
Preference number: 3 (lower is better)
Translates to: STFVISMGGVFT*PNDLPSIGEWV
Trigger: TACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
3UTR TCA 72 bp AATTTGCCCAGTTCTCGTAGTCTGTTTTCCTCCAAGTaGAGTGCCAATAAAGAACTTGGTTTGGCAAAAGCA +
Preference number: 3 (lower is better)
Translates to: NLPSSRSLFSSK*SANKELGLAKA
Trigger: TGCTTTTGCCAAACCAAGTTCTTTATTGGCACTTCACTTGGAGGAAAACAGACTACGAGAACTGGGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CAA 90 bp CTGAGAGTAGAGATAACGTCAAGTTTTTCCAGTTCTGTGATATCCTGGATTTTAGTGCCAATAAAGAACTaGGTTTGGCAAAAGCACTGT +
Preference number: 3 (lower is better)
Translates to: LRVEITSSFSSSVISWILVPIKN*VWQKHC
Trigger: ACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCAC...TAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTATCTCTACTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR-3UTR CAA 90 bp GAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGACCAAAGATTGTAATTaGCCCAGTTCTCGTAGTCTG +
Preference number: 3 (lower is better)
Translates to: ESCSQKFFSYLGCSGIFVTKDCN*PSSRSL
Trigger: CAGACTACGAGAACTGGGCAAATTACAATCTTTGGT...CACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 72 bp ATAAGCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTATCATCTGAATTCACA +
Preference number: 3 (lower is better)
Translates to: ISEFFFACSSAR*NSAFALSSEFT
Trigger: TGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 72 bp CTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGAGAGATACTTATCCCT +
Preference number: 3 (lower is better)
Translates to: LWYICAVGDAIF*CDKRDGEILIP
Trigger: AGGGATAAGTATCTCTCCATCTCTTTTATCACATCAGAATATTGCATCTCCTACTGCACAAATATACCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR CCA 72 bp TTCACTTGGCCAAATGATCTGCCATCCATAGGAGAGTaGGTAACAGGAATAAGATCAAAGATTCATTTATAT +
Preference number: 3 (lower is better)
Translates to: FTWPNDLPSIGE*VTGIRSKIHLY
Trigger: ATATAAATGAATCTTTGATCTTATTCCTGTTACCCACTCTCCTATGGATGGCAGATCATTTGGCCAAGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568404.1
3UTR-3UTR CAA 90 bp AGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTACACACATTTCTAAATaGGTCGACTGGAATCAAATC +
Preference number: 3 (lower is better)
Translates to: SFLVYAHFSLGSYIRFDLTHISK*VDWNQI
Trigger: GATTTGATTCCAGTCGACCAATTTAGAAATGTGTGT...AAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
3UTR TCA 72 bp GTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCCAAAAATTCTTCTCTT +
Preference number: 3 (lower is better)
Translates to: VCSFLFRQLHSI*SWKVAPKNSSL
Trigger: AAGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR CCA 72 bp AACATCTGTAAGTTAGGCAGTCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTACAAATTCACTGGATT +
Preference number: 3 (lower is better)
Translates to: NICKLGSRNISM*RCSIFLQIHWI
Trigger: AATCCAGTGAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGCCATCCATAGAGCCTCTCTGGCCTTaGGCCCCGAGGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: FVISMGGVFTWPNDLPSIEPLWP*APRAWP
Trigger: GGGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTC...TATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGAGCCTCTCTGGCCTTaGGCCCCGAGGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAEPLWP*APRAWP
Trigger: GGGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAGCCTCTCTGGCCTTaGGCCCCGAGGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQEPLWP*APRAWP
Trigger: GGGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp GGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCTTGGATCCATCACTGTaGCCTTTGCCCGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: GEILIPLSCRKAISAWMLLDPSL*PLPEPL
Trigger: CAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAA...GAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGCTTTGCCCGAGCCCTTaGGTTCAGCCAGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: QVMAESTRQKYICYLYGRLCPSP*VQPVLV
Trigger: AACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAG...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCTGTCCATAGCCACTTaGAGGCACTTTCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: PSELPKSYFCMDAPRIICLSIAT*RHFLVQ
Trigger: CTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAG...ACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTAGCTCTCGGGTCCTaGAAGCGCGGAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGLALGS*KRGASL
Trigger: CAGAGAGGCTCCGCGCTTCCAGGACCCGAGAGCTAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTCGCGGAACGTGACTaGAAGCAACGCGTTATGGGC +
Preference number: 4 (lower is better)
Translates to: YFCMDAPRIICQNPSILVFAERD*KQRVMG
Trigger: GCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAA...AACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTTGGATCCATCACTGTaGCCTTTGCCCGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYALDPSL*PLPEPL
Trigger: CAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTTAGCTCTCGGGTCCTaGAAGCGCGGAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLLALGS*KRGASL
Trigger: CAGAGAGGCTCCGCGCTTCCAGGACCCGAGAGCTAA...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAGCGTTATGGGCAAGGTaGTGGGGACTTATTCGTTAC +
Preference number: 4 (lower is better)
Translates to: PLGRSTFVISMGGVFTWPALWAR*WGLIRY
Trigger: GTAACGAATAAGTCCCCACCACCTTGCCCATAACGC...TGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTAGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LIPLSCRKAISAWMLRGLGGVFT*PNDLPS
Trigger: GGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC...TAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCCAGTTCGCGGAACGTaGCTGAAAGCAACGCGTTAT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAPVRGT*LKATRY
Trigger: ATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: ILIPLSCRKAISAWMLRGCSSAR*NSAFAL
Trigger: TAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACA...TCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGTATTCTAAAAGCCTCTaGGCTGGTTTCCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SELPKSYFCMDAPRIICQYSKSL*AGFPSP
Trigger: GGGAGAAGGGAAACCAGCTCAGAGGCTTTTAGAATA...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTAGCTCTCGGGTCCTaGAAGCGCGGAGCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLALGS*KRGASL
Trigger: CAGAGAGGCTCCGCGCTTCCAGGACCCGAGAGCTAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGAAAGCAACGCGTTATaGGCAAGGTGGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYESNAL*ARWWGL
Trigger: AAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp AAGGCACTTTCTGGTACAGTAGTTGTCTACTGGTTAAGTGAGTCTGAGGCTTTACACTCAGCCTCAATGTaGCTGGCTTTTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: KALSGTVVVYWLSESEALHSASM*LAFAMD
Trigger: ATCCATGGCAAAAGCCAGCCACATTGAGGCTGAGTG...TAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp AGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTTGCACTGTCAGTCTCTaGTGGTTCAATTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: SYFCMDAPRIICQNPSILCTVSL*WFNWYP
Trigger: GGGATACCAATTGAACCATCAGAGACTGACAGTGCA...AAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCTGTCCATAGCCACTTaGAGGCACTTTCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYLSIAT*RHFLVQ
Trigger: CTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LPKSYFCMDAPRIICQNPCSSAR*NSAFAL
Trigger: TAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACA...GGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp GAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGACTTCAGGAGTTAAAGTaGCGTCAGATCCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: EILIPLSCRKAISAWMLRLQELK*RQIPSN
Trigger: ATTACTTGGGATCTGACGTCACTTTAACTCCTGAAG...TCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp GGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCAACTACTAAACAGGTaGGTTTCTTGGTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: GEILIPLSCRKAISAWMLQLLNR*VSWCML
Trigger: GAGCATACACCAAGAAACTCACCTGTTTAGTAGTTG...GAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000644811.1
CDS-3UTR GCA 90 bp AGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTACAAACCACTTGCACTaGCGAACACTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: SYFCMDAPRIICQNPSILTNHLH*RTLQSQ
Trigger: CTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGT...AAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCGTTATGGGCAAGGTaGTGGGGACTTATTCGTTAC +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYALWAR*WGLIRY
Trigger: GTAACGAATAAGTCCCCACCACCTTGCCCATAACGC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCCAAACTAATCAGTTTTaGTCGGGCCTTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: STRQKYICYLYGRSFHLAQTNQF*SGLDSG
Trigger: CCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTG...GGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCACTCAGCCTCAATGTaGCTGGCTTTTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAHSASM*LAFAMD
Trigger: ATCCATGGCAAAAGCCAGCCACATTGAGGCTGAGTG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp AAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGCCATCCATAGGAGAGTaGGTAACAGGAATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: KRWRDTYPSELPKSYFCMPSIGE*VTGISE
Trigger: CTCGCTTATTCCTGTTACCCACTCTCCTATGGATGG...CATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000644811.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTCGCGGAACGTGACTaGAAGCAACGCGTTATGGGC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFAERD*KQRVMG
Trigger: GCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTTGCCCGAGCCCTTaGGTTCAGCCAGTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLCPSP*VQPVLV
Trigger: AACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCACCTTCGGTAGCTCTCTaGATCATGCATATCTTCATT +
Preference number: 4 (lower is better)
Translates to: PLGRSTFVISMGGVFTWPPSVAL*IMHIFI
Trigger: AATGAAGATATGCATGATTCAGAGAGCTACCGAAGG...TGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTGCACTGTCAGTCTCTaGTGGTTCAATTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYCTVSL*WFNWYP
Trigger: GGGATACCAATTGAACCATCAGAGACTGACAGTGCA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCCAACTACTAAACAGGTaGGTTTCTTGGTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: LPKSYFCMDAPRIICQNPQLLNR*VSWCML
Trigger: GAGCATACACCAAGAAACTCACCTGTTTAGTAGTTG...GGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000644811.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTGGATCCATCACTGTaGCCTTTGCCCGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLDPSL*PLPEPL
Trigger: CAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGTGCACTGCCGAACACTaGAATCACAGTTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: QVMAESTRQKYICYLYGRCTAEH*NHSFFV
Trigger: GACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCA...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTACAAACCACTTGCACTaGCGAACACTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYATNHLH*RTLQSQ
Trigger: CTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGT...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp AAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGCCGAAAAGCTATTTCTaGATGGATGCTCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: KRWRDTYPSELPKSYFCMPKSYF*MDAPRI
Trigger: AATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGG...CATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp TTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGCCATCCATATTATGGGCAAGGTGGTaGGGACTTATTCGTTACCTC +
Preference number: 4 (lower is better)
Translates to: FVISMGGVFTWPNDLPSILWARW*GLIRYL
Trigger: GAGGTAACGAATAAGTCCCCACCACCTTGCCCATAA...TATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCCATCCATAGGAGAGTaGGTAACAGGAATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYPSIGE*VTGISE
Trigger: CTCGCTTATTCCTGTTACCCACTCTCCTATGGATGG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp ATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: ISAWMLRGLFVRIPAFLFGGVFT*PNDLPS
Trigger: GGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC...AAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAGGVFT*PNDLPS
Trigger: GGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTCCAGTTCGCGGAACGTaGCTGAAAGCAACGCGTTAT +
Preference number: 4 (lower is better)
Translates to: SFLVYAHFSLGSYIRFDLPVRGT*LKATRY
Trigger: ATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGG...AAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCAGTTCGCGGAACGTaGCTGAAAGCAACGCGTTAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPVRGT*LKATRY
Trigger: ATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCACTTGATTTGCTTTGCTaGCACATCCAATGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: PLGRSTFVISMGGVFTWPLDLLC*HIQCVK
Trigger: TTTGACACATTGGATGTGTCAGCAAAGCAAATCAAG...TGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATCTGCCAGTTCCTTaGTTTGCTTTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: VRSQVMAESTRQKYICYLYLPVP*FALLTH
Trigger: ATGTGTCAGCAAAGCAAATCAAGGAACTGGCAGATA...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTGATAGTTGGATTGACTaGTGGATTCTTTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: YPSELPKSYFCMDAPRIIDSWID*WILFHG
Trigger: CCCATGAAAAAGAATCCATCAGTCAATCCAACTATC...AATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp AGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGGTTTTGGTCGGGCCTTaGTTCTGGGCTCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: RSTFVISMGGVFTWPNDLVLVGP*FWAPFL
Trigger: TAAAAATGGAGCCCAGAATCAAGGCCCGACCAAAAC...CAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp AGCATTTTTCTACAAATTCACTGGATTGCCATACACTGTAAGCTCCCTGAGAGTTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: SIFLQIHWIAIHCKLPESFHLAK*SAIHRR
Trigger: TCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAA...ACTCTCAGGGAGCTTACAGTGTATGGCAATCCAGTGAATTTGTAGAAAAATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCCTTCAGGAGTTAAAGTaGCGTCAGATCCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: VRSQVMAESTRQKYICYLLQELK*RQIPSN
Trigger: ATTACTTGGGATCTGACGTCACTTTAACTCCTGAAG...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR TCA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VRSQVMAESTRQKYICYLQLHSI*SWKVAP
Trigger: GGGAGCAACTTTCCAAGATCAAATCGAATGTAACTG...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCAAAGACAAACCACTTaGACTGCCGAACACTGCAAT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYQRQTT*TAEHCN
Trigger: ATTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCCTATTTCTGCATGGATaGTCCGAGGATTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPKSYFCMDAPRIICQNPLFLHG*SEDYLS
Trigger: TGACAAATAATCCTCGGAGCATCCATGCAGAAATAG...GGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCCGAAAAGCTATTTCTaGATGGATGCTCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAPKSYF*MDAPRI
Trigger: AATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp ATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTCTCTTATCTTGGTTaGTCTGGTATATTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ILIPLSCRKAISAWMLRGFSYLG*SGIFVQ
Trigger: CTGCACAAATATACCAGAGCAACCAAGATAAGAGAA...TCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAAAGCAACGCGTTATaGGCAAGGTGGTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQESNAL*ARWWGL
Trigger: AAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AAGGCACTTTCTGGTACAGTAGTTGTCTACTGGTTAAGTGAGTCTGAGGCTTTACTTGAAGGCACTTTCTaGTACAGTAGTTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: KALSGTVVVYWLSESEALLEGTF*YSSCLL
Trigger: CAGTAGACAACTACTGTACCAGAAAGTGCCTTCAAG...TAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTCCATCCATAGGAGAGTaGGTAACAGGAATAAGATCA +
Preference number: 4 (lower is better)
Translates to: VMAESTRQKYICYLYGRSPSIGE*VTGIRS
Trigger: TGATCTTATTCCTGTTACCCACTCTCCTATGGATGG...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568404.1
3UTR CAA 72 bp TCTTTGCTTGTAGTTCAGCGAGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCACAGGACTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: SLLVVQRGEIQL*PYHLNSQDFHL
Trigger: TAGATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGACTTGGTTCTTCAGTaGCAGTTTCACAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYADLVLQ*QFHNSS
Trigger: TGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCCTTCGGTAGCTCTCTaGATCATGCATATCTTCATT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYPSVAL*IMHIFI
Trigger: AATGAAGATATGCATGATTCAGAGAGCTACCGAAGG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGGCAAAACAAGGTCATaGTCAAAGACAAACCACTTG +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYGKTRS*SKTNHL
Trigger: CAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTGTCCATAGCCACTTaGAGGCACTTTCTGGTACAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLSIAT*RHFLVQ
Trigger: CTGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AAGGCACTTTCTGGTACAGTAGTTGTCTACTGGTTAAGTGAGTCTGAGGCTTTATCCACTACCAATTCTTaGAGGACTACTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KALSGTVVVYWLSESEALSTTNS*RTTKLS
Trigger: TGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGA...TAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTAGCACTGTCATTAAATaGTCGGATGCGGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: TTTKQVSFLVYAHFSLGSSTVIK*SDAVMV
Trigger: GACCATAACCGCATCCGATCATTTAATGACAGTGCT...ACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATTTTGCCCTATCATCTaGATTCACAGGACTTCCATC +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISAFCPII*IHRTSI
Trigger: GATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAA...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHCSSAR*NSAFAL
Trigger: TAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp CTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGATGTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: LILVALVYLCSRRCNILMFHLAK*SAIHRR
Trigger: TCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAA...CATCAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp CTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTCTTCAGGAGTTAAAGTaGCGTCAGATCCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: LNPLGRSTFVISMGGVFTLQELK*RQIPSN
Trigger: ATTACTTGGGATCTGACGTCACTTTAACTCCTGAAG...AGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR TCA 90 bp AGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTAGATACTTATCCCTCTaGGTTGCCGAAAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: SYFCMDAPRIICQNPSILRYLSL*VAEKLF
Trigger: AAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCT...AAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCAACTACTAAACAGGTaGGTTTCTTGGTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAQLLNR*VSWCML
Trigger: GAGCATACACCAAGAAACTCACCTGTTTAGTAGTTG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCAGCCAGTTCCTTGATTTaGTTTGCTGACACATCCAAT +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISAASSLI*FADTSN
Trigger: ATTGGATGTGTCAGCAAAGCAAATCAAGGAACTGGC...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCCAGTTCCTTGATTTaGTTTGCTGACACATCCAAT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYASSLI*FADTSN
Trigger: ATTGGATGTGTCAGCAAAGCAAATCAAGGAACTGGC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCATTGCTGTGGTATCTaGCAGTTCCTTGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYHCCGI*QFLDLL
Trigger: AAGCAAATCAAGGAACTGGCAGATACCACAGCAATG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTGCACTGCCGAACACTaGAATCACAGTTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHCTAEH*NHSFFV
Trigger: GACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCAAAGACAAACCACTTaGACTGCCGAACACTGCAAT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGQRQTT*TAEHCN
Trigger: ATTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGCCAAAGATTGTAATTTaGCCAGTTCTCGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QVMAESTRQKYICYLYGRPKIVI*PVLVVC
Trigger: ACAGACTACGAGAACTGGGCAAATTACAATCTTTGG...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp AGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATCTATTTCTGCATGGATaGTCCGAGGATTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: RWRDTYPSELPKSYFCMDLFLHG*SEDYLS
Trigger: TGACAAATAATCCTCGGAGCATCCATGCAGAAATAG...ATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp TATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTCTTATCCCTCTGAGTTaGCGAAAAGCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: YFCMDAPRIICQNPSILVLIPLS*RKAISA
Trigger: TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG...AACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCTTATCCCTCTGAGTTaGCGAAAAGCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYLIPLS*RKAISA
Trigger: TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCTTATCCCTCTGAGTTaGCGAAAAGCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYALIPLS*RKAISA
Trigger: TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGTTCTCTTATCTTGGTTaGTCTGGTATATTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SELPKSYFCMDAPRIICQFSYLG*SGIFVQ
Trigger: CTGCACAAATATACCAGAGCAACCAAGATAAGAGAA...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTGAGTTTCTTGGTGTATaGTCATTTCTCTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: VMAESTRQKYICYLYGRSEFLGV*SFLFRQ
Trigger: CTGCCTAAAGAGAAATGAGCATACACCAAGAAACTC...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR GCA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGGAGTTTCTTGGTGTATaGTCATTTCTCTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: QVMAESTRQKYICYLYGREFLGV*SFLFRQ
Trigger: CTGCCTAAAGAGAAATGAGCATACACCAAGAAACTC...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCGTTATGGGCAAGGTaGTGGGGACTTATTCGTTAC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQALWAR*WGLIRY
Trigger: GTAACGAATAAGTCCCCACCACCTTGCCCATAACGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCACTCAGCCTCAATGTaGCTGGCTTTTGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHSASM*LAFAMD
Trigger: ATCCATGGCAAAAGCCAGCCACATTGAGGCTGAGTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp TATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTTGCTCGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: YAHFSLGSYIRFDLGKLLGGVFT*PNDLPS
Trigger: GGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC...GAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGCATTTGTTATCTCTATaGGAGGAGTTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: QVMAESTRQKYICYLYGRHLLSL*EEFSLG
Trigger: GCCAAGTGAAAACTCCTCCCATAGAGATAACAAATG...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR CCA 90 bp TTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTT +
Preference number: 4 (lower is better)
Translates to: LPKSYFCMDAPRIICQNPKAISA*MLRGLF
Trigger: AAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT...GGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCGGATTGGTTGTATATTaGGGGTCATTCAGACATAAA +
Preference number: 4 (lower is better)
Translates to: VRSQVMAESTRQKYICYLGLVVY*GSFRHK
Trigger: TTTATGTCTGAATGACCCTCAATATACAACCAATCC...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCTTGATTTGCTTTGCTaGCACATCCAATGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYALDLLC*HIQCVK
Trigger: TTTGACACATTGGATGTGTCAGCAAAGCAAATCAAG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTATCTGCCAGTTCCTTaGTTTGCTTTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGYLPVP*FALLTH
Trigger: ATGTGTCAGCAAAGCAAATCAAGGAACTGGCAGATA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGATAGTTGGATTGACTaGTGGATTCTTTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYDSWID*WILFHG
Trigger: CCCATGAAAAAGAATCCATCAGTCAATCCAACTATC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp AGCATTTTTCTACAAATTCACTGGATTGCCATACACTGTAAGCTCCCTGAGAGTCCGAGGAATGAACACTaGATTAACCATTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: SIFLQIHWIAIHCKLPESPRNEH*INHWIV
Trigger: AACTATCCAATGGTTAATTCAGTGTTCATTCCTCGG...ACTCTCAGGGAGCTTACAGTGTATGGCAATCCAGTGAATTTGTAGAAAAATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTTTTGGTCGGGCCTTaGTTCTGGGCTCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVLVGP*FWAPFL
Trigger: TAAAAATGGAGCCCAGAATCAAGGCCCGACCAAAAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTGTTTTGGTCGGGCCTTaGTTCTGGGCTCCATTTTTA +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSVLVGP*FWAPFL
Trigger: TAAAAATGGAGCCCAGAATCAAGGCCCGACCAAAAC...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTGCCATGGATTATGTTaGATATCAAGAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYACHGLC*ISRVRR
Trigger: CCTTCTCACTCTTGATATTCAACATAATCCATGGCA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGCTCTTCCCAACCAGTaGGAAGATTATTATTTATGC +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAALPNQ*EDYYLC
Trigger: GCATAAATAATAATCTTCTCACTGGTTGGGAAGAGC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTAACCACTCAATGAAGTaGTTCTGTTGTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYANHSMK*FCCSQE
Trigger: CTCTTGAGAACAACAGAATCACTTCATTGAGTGGTT...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATCACACATGTCTAGAATaGCCAAGTTGCATAAACCCT +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHHTCLE*PSCINP
Trigger: AGGGTTTATGCAACTTGGTCATTCTAGACATGTGTG...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGCACTGTCAGTCTCTaGTGGTTCAATTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCTVSL*WFNWYP
Trigger: GGGATACCAATTGAACCATCAGAGACTGACAGTGCA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGGCCCTTCAACTTGGCTaGTTTCATTACCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLALQLG*FHYPVE
Trigger: TTCTACAGGGTAATGAAATCAGCCAAGTTGAAGGGC...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTCCACTACCAATTCTTaGAGGACTACTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYSTTNS*RTTKLS
Trigger: TGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGTTTTGCCCTATCATCTaGATTCACAGGACTTCCATC +
Preference number: 4 (lower is better)
Translates to: SLILVALVYLCSRRCNILFCPII*IHRTSI
Trigger: GATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAA...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTTTGCCCTATCATCTaGATTCACAGGACTTCCATC +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGFCPII*IHRTSI
Trigger: GATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp TATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTTGCTCTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: YAHFSLGSYIRFDLGKLLCSSAR*NSAFAL
Trigger: TAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACA...GAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCAAGATACTTATCCCTCTaGGTTGCCGAAAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISARYLSL*VAEKLF
Trigger: AAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCT...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGQLHSI*SWKVAP
Trigger: GGGAGCAACTTTCCAAGATCAAATCGAATGTAACTG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACAAACCACTTGCACTaGCGAACACTGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTNHLH*RTLQSQ
Trigger: CTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp AAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCCACATGGTTATGGCTTaGATCCAAATATTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KAISAWMLRGLFVRIPAFHMVMA*IQIFKV
Trigger: AACCTTGAATATTTGGATGCAAGCCATAACCATGTG...GAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCAATGTTATCAAAGGTATaGTCTTCCCAACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISAMLSKV*SSQPVR
Trigger: TCTCACTGGTTGGGAAGAGCATACCTTTGATAACAT...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCCAAAGATTGTAATTTaGCCAGTTCTCGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAPKIVI*PVLVVC
Trigger: ACAGACTACGAGAACTGGGCAAATTACAATCTTTGG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATACCGAAAAGCTATTTCTaGATGGATGCTCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAIPKSYF*MDAPRI
Trigger: AATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGG...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp AAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCACCGAAAAGCTATTTCTaGATGGATGCTCCGAGGATT +
Preference number: 4 (lower is better)
Translates to: KILLLSWLLWYICAVGDAPKSYF*MDAPRI
Trigger: AATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGG...TGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp AAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCGCTCTGGTATATTTGTaGAGTAGGAGATGCAATATT +
Preference number: 4 (lower is better)
Translates to: KAISAWMLRGLFVRIPAFALVYL*SRRCNI
Trigger: AATATTGCATCTCCTACTGCACAAATATACCAGAGC...GAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp AAGGCACTTTCTGGTACAGTAGTTGTCTACTGGTTAAGTGAGTCTGAGGCTTTATTCTCTTATCTTGGTTaGTCTGGTATATTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KALSGTVVVYWLSESEALFSYLG*SGIFVQ
Trigger: CTGCACAAATATACCAGAGCAACCAAGATAAGAGAA...TAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTATGGGCAAGGTGGTaGGGACTTATTCGTTACCTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLWARW*GLIRYL
Trigger: GAGGTAACGAATAAGTCCCCACCACCTTGCCCATAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTGAAGACAAACTGGATTaGTTGTATATTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VMAESTRQKYICYLYGRSEDKLD*LYIEGH
Trigger: ATGACCCTCAATATACAACCAATCCAGTTTGTCTTC...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp AAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCACACAGAAGACAAACTaGATTGGTTGTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: KAISAWMLRGLFVRIPAFTQKTN*IGCILR
Trigger: CCTCAATATACAACCAATCCAGTTTGTCTTCTGTGT...GAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCACAGTAGTTGTCTACTaGTTAAGTGAGTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGTVVVY*LSESEA
Trigger: AGCCTCAGACTCACTTAACCAGTAGACAACTACTGT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATCTTGAAGGCACTTTCTaGTACAGTAGTTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHLEGTF*YSSCLL
Trigger: CAGTAGACAACTACTGTACCAGAAAGTGCCTTCAAG...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTCAAGCCCTTCAACTTaGCTGATTTCATTACCCTGT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGSSPST*LISLPC
Trigger: ACAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SELPKSYFCMDAPRIICQRNISM*RCSIFL
Trigger: TAGAAAAATGCTACATCGCCACATGCTTATATTTCG...CTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCATCCATAGGAGAGTaGGTAACAGGAATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPSIGE*VTGISE
Trigger: CTCGCTTATTCCTGTTACCCACTCTCCTATGGATGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTCCATCCATAGGAGAGTaGGTAACAGGAATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSPSIGE*VTGISE
Trigger: CTCGCTTATTCCTGTTACCCACTCTCCTATGGATGG...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGAGGAGTTTTCACTTaGCCAAATGATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGGVFT*PNDLPS
Trigger: GGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTGTTATCTCTATaGGAGGAGTTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAHLLSL*EEFSLG
Trigger: GCCAAGTGAAAACTCCTCCCATAGAGATAACAAATG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp AAGGCACTTTCTGGTACAGTAGTTGTCTACTGGTTAAGTGAGTCTGAGGCTTTAAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTT +
Preference number: 4 (lower is better)
Translates to: KALSGTVVVYWLSESEALKAISA*MLRGLF
Trigger: AAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT...TAAAGCCTCAGACTCACTTAACCAGTAGACAACTACTGTACCAGAAAGTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCCGAGGAATGAACACTaGATTAACCATTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGPRNEH*INHWIV
Trigger: AACTATCCAATGGTTAATTCAGTGTTCATTCCTCGG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGGGCAAAACAAGGTCATaGTCAAAGACAAACCACTTG +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLGKTRS*SKTNHL
Trigger: CAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCC...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTGCCATGGATTATGTTaGATATCAAGAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHCHGLC*ISRVRR
Trigger: CCTTCTCACTCTTGATATTCAACATAATCCATGGCA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATCTTCTTCTTCAGAAATaGAGACTCCATTTAAATGGG +
Preference number: 4 (lower is better)
Translates to: LGRSTFVISMGGVFTWPNLLLQK*RLHLNG
Trigger: CCCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAG...ATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTTGCTCCGTAAGAGAGATAACTaGGTAATCCTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: YAHFSLGSYIRFDLGKLLRKRDN*VILVPA
Trigger: TGCAGGAACAAGGATTACTCAGTTATCTCTCTTACG...GAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTGTGCATCTCCTGATTaGCAGCAATATAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGCASPD*QQYSYC
Trigger: GCAATAACTATATTGCTGTCAATCAGGAGATGCACA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp TGTAGCCCAAATGAAGAACTTCTAAACTGTGCATTATTGGAGGCAAATTTTCACCACACATGTCTAGAATaGCCAAGTTGCATAAACCCT +
Preference number: 4 (lower is better)
Translates to: CSPNEELLNCALLEANFHHTCLE*PSCINP
Trigger: AGGGTTTATGCAACTTGGTCATTCTAGACATGTGTG...GTGAAAATTTGCCTCCAATAATGCACAGTTTAGAAGTTCTTCATTTGGGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGTTCTTGCATTTGTTTaGAGTTGGAATGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGVLAFV*SWNVLV
Trigger: GACAAGGACATTCCAACTTCAAACAAATGCAAGAAC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCTGAATGAGGTAAGATaGTTGTTCTGTAGATTCACA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYLNEVR*LFCRFT
Trigger: TGTGAATCTACAGAACAATCATCTTACCTCATTCAG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCCCTTCAACTTGGCTaGTTTCATTACCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQALQLG*FHYPVE
Trigger: TTCTACAGGGTAATGAAATCAGCCAAGTTGAAGGGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTGCCCTTCAACTTGGCTaGTTTCATTACCCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSALQLG*FHYPVE
Trigger: TTCTACAGGGTAATGAAATCAGCCAAGTTGAAGGGC...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGCACTGTCATTAAATaGTCGGATGCGGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSTVIK*SDAVMV
Trigger: GACCATAACCGCATCCGATCATTTAATGACAGTGCT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTAGCACTGTCATTAAATaGTCGGATGCGGTTATGGTC +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSSTVIK*SDAVMV
Trigger: GACCATAACCGCATCCGATCATTTAATGACAGTGCT...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTTTGCCCTATCATCTaGATTCACAGGACTTCCATC +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAIFCPII*IHRTSI
Trigger: GATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAA...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCSSAR*NSAFAL
Trigger: TAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFHLAK*SAIHRR
Trigger: TCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTTCACTTGGCCAAATaGTCTGCCATCCATAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSFHLAK*SAIHRR
Trigger: TCTCCTATGGATGGCAGATCATTTGGCCAAGTGAAA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCAGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISAGDAIF*CDKRDG
Trigger: TCCATCTCTTTTATCACATCAGAATATTGCATCTCC...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYGDAIF*CDKRDG
Trigger: TCCATCTCTTTTATCACATCAGAATATTGCATCTCC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKQLHSI*SWKVAP
Trigger: GGGAGCAACTTTCCAAGATCAAATCGAATGTAACTG...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp GAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESCSQKFFSYLGCSGIFVQLHSI*SWKVAP
Trigger: GGGAGCAACTTTCCAAGATCAAATCGAATGTAACTG...CACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTAGTCATCAGATCGAGTaGCTTCTTCAAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYASHQIE*LLQNGN
Trigger: ATTTCCATTTTGAAGAAGGCACTCGATCTGATGACT...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGCACTGCCGAACACTaGAATCACAGTTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCTAEH*NHSFFV
Trigger: GACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCAAAGACAAACCACTTaGACTGCCGAACACTGCAAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQQRQTT*TAEHCN
Trigger: ATTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATATGTTATCAAAGGTATaGTCTTCCCAACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHMLSKV*SSQPVR
Trigger: TCTCACTGGTTGGGAAGAGCATACCTTTGATAACAT...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCATGTCCTTGTCGTTCTaGAATCATGTCAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGMSLSF*NHVRSK
Trigger: CTTACTTCTGACATGATTGCAGAACGACAAGGACAT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp CTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCCTATTTCTGCATGGATaGTCCGAGGATTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLLSWLLWYICAVGDAIFLFLHG*SEDYLS
Trigger: TGACAAATAATCCTCGGAGCATCCATGCAGAAATAG...GAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCTATTTCTGCATGGATaGTCCGAGGATTATTTGTCA +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGLFLHG*SEDYLS
Trigger: TGACAAATAATCCTCGGAGCATCCATGCAGAAATAG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp TTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTTGCTCTGGTATATTTGTaGAGTAGGAGATGCAATATT +
Preference number: 4 (lower is better)
Translates to: FCMDAPRIICQNPSILVFALVYL*SRRCNI
Trigger: AATATTGCATCTCCTACTGCACAAATATACCAGAGC...AAAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCTGGTATATTTGTaGAGTAGGAGATGCAATATT +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYALVYL*SRRCNI
Trigger: AATATTGCATCTCCTACTGCACAAATATACCAGAGC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR GCA 90 bp AGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTTTGATCTTGGAAAGTTaGTCCCAAAAATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SYFCMDAPRIICQNPSILLILES*SQKFFS
Trigger: AGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAA...AAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTTCCAGTTGTTCATTaGAGTCAAGACATCGACCAA +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGFPVVH*SQDIDQ
Trigger: TTGGTCGATGTCTTGACTCCAATGAACAACTGGAAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTTACTTTACTGTTATTaGATCCATCACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYALLYCY*IHHCAL
Trigger: AAGGGCACAGTGATGGATCCAATAACAGTAAAGTAA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCAAACTAATCAGTTTTaGTCGGGCCTTGATTCTGGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQQTNQF*SGLDSG
Trigger: CCCAGAATCAAGGCCCGACCAAAACTGATTAGTTTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp TTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGCCATCCATAGAAGTCCTGTTAACTTaGAGAGATCTCTCAATTTAC +
Preference number: 4 (lower is better)
Translates to: FVISMGGVFTWPNDLPSIEVLLT*RDLSIY
Trigger: GTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTC...TATGGATGGCAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTCTAAATTGGTCGACTaGAATCAAATCCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYASKLVD*NQIHCS
Trigger: AGAACAGTGGATTTGATTCCAGTCGACCAATTTAGA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp CTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATCACACATTTCTAAATTaGTCGACTGGAATCAAATCC +
Preference number: 4 (lower is better)
Translates to: LGRSTFVISMGGVFTWPNHTFLN*STGIKS
Trigger: GGATTTGATTCCAGTCGACCAATTTAGAAATGTGTG...ATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCCATTTGTTATCTCTATaGGAGGAGTTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: LLLSWLLWYICAVGDAIFHLLSL*EEFSLG
Trigger: GCCAAGTGAAAACTCCTCCCATAGAGATAACAAATG...GAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGGATTGGTTGTATATTaGGGGTCATTCAGACATAAA +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGGLVVY*GSFRHK
Trigger: TTTATGTCTGAATGACCCTCAATATACAACCAATCC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTATCTGCCAGTTCCTTaGTTTGCTTTGCTGACACAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQYLPVP*FALLTH
Trigger: ATGTGTCAGCAAAGCAAATCAAGGAACTGGCAGATA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGACTTGGTTCTTCAGTaGCAGTTTCACAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SFLVYAHFSLGSYIRFDLDLVLQ*QFHNSS
Trigger: TGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTC...AAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGACTTGGTTCTTCAGTaGCAGTTTCACAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQDLVLQ*QFHNSS
Trigger: TGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCTTCGGTAGCTCTCTaGATCATGCATATCTTCATT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPSVAL*IMHIFI
Trigger: AATGAAGATATGCATGATTCAGAGAGCTACCGAAGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGCAAAACAAGGTCATaGTCAAAGACAAACCACTTG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGKTRS*SKTNHL
Trigger: CAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCGTAAGAGAGATAACTaGGTAATCCTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQRKRDN*VILVPA
Trigger: TGCAGGAACAAGGATTACTCAGTTATCTCTCTTACG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTCGTAAGAGAGATAACTaGGTAATCCTTGTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSRKRDN*VILVPA
Trigger: TGCAGGAACAAGGATTACTCAGTTATCTCTCTTACG...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATAAACCACTCAATGAAGTaGTTCTGTTGTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAINHSMK*FCCSQE
Trigger: CTCTTGAGAACAACAGAATCACTTCATTGAGTGGTT...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTGTGCATCTCCTGATTaGCAGCAATATAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKCASPD*QQYSYC
Trigger: GCAATAACTATATTGCTGTCAATCAGGAGATGCACA...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCACACATGTCTAGAATaGCCAAGTTGCATAAACCCT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHTCLE*PSCINP
Trigger: AGGGTTTATGCAACTTGGTCATTCTAGACATGTGTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGGTTCTTGCATTTGTTTaGAGTTGGAATGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKVLAFV*SWNVLV
Trigger: GACAAGGACATTCCAACTTCAAACAAATGCAAGAAC...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp AGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGCTGAATGAGGTAAGATaGTTGTTCTGTAGATTCACA +
Preference number: 4 (lower is better)
Translates to: RSTFVISMGGVFTWPNDLLNEVR*LFCRFT
Trigger: TGTGAATCTACAGAACAATCATCTTACCTCATTCAG...CAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTTTGCCCTATCATCTaGATTCACAGGACTTCCATC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFCPII*IHRTSI
Trigger: GATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTCAGGAGTTAAAGTaGCGTCAGATCCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLQELK*RQIPSN
Trigger: ATTACTTGGGATCTGACGTCACTTTAACTCCTGAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTCTTCAGGAGTTAAAGTaGCGTCAGATCCCAAGTAAT +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSLQELK*RQIPSN
Trigger: ATTACTTGGGATCTGACGTCACTTTAACTCCTGAAG...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp GGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTAGATACTTATCCCTCTaGGTTGCCGAAAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: GKLLPKILLLSWLLWYICRYLSL*VAEKLF
Trigger: AAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCT...ACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQQLHSI*SWKVAP
Trigger: GGGAGCAACTTTCCAAGATCAAATCGAATGTAACTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCAACTACTAAACAGGTaGGTTTCTTGGTGTATGCTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQQLLNR*VSWCML
Trigger: GAGCATACACCAAGAAACTCACCTGTTTAGTAGTTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCTTCAATTTTCTCTATaGAGCACTCAGCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGLQFSL*STQQSK
Trigger: TTTGGATTGCTGAGTGCTGCATAGAGAAAATTGAAG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTCAAGACATCGACCAATaGTATTTATTAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: ISAWMLRGLFVRIPAFLFQDIDQ*YLLDFQ
Trigger: CTGGAAATCTAATAAATAGCATTGGTCGATGTCTTG...AAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCCAGTTCCTTGATTTaGTTTGCTGACACATCCAAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQASSLI*FADTSN
Trigger: ATTGGATGTGTCAGCAAAGCAAATCAAGGAACTGGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ACTTCTAAACTGTGCATTATTGGAGGCAAATTTTCACTGCTCATTATATCTCTGCATTGCTGTGGTATCTaGCAGTTCCTTGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: TSKLCIIGGKFSLLIISLHCCGI*QFLDLL
Trigger: AAGCAAATCAAGGAACTGGCAGATACCACAGCAATG...CAGAGATATAATGAGCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCATTGCTGTGGTATCTaGCAGTTCCTTGATTTGCTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHCCGI*QFLDLL
Trigger: AAGCAAATCAAGGAACTGGCAGATACCACAGCAATG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATAGTCATCAGATCGAGTaGCTTCTTCAAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHSHQIE*LLQNGN
Trigger: ATTTCCATTTTGAAGAAGGCACTCGATCTGATGACT...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATCACATGGTTATGGCTTaGATCCAAATATTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHHMVMA*IQIFKV
Trigger: AACCTTGAATATTTGGATGCAAGCCATAACCATGTG...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTTTCATAGCTGCTGTTaGTTCTTCTTCAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYFHSCC*FFFRNE
Trigger: TTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp GAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGATGTCCTTGTCGTTCTaGAATCATGTCAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: ESCSQKFFSYLGCSGIFVMSLSF*NHVRSK
Trigger: CTTACTTCTGACATGATTGCAGAACGACAAGGACAT...CACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGAGGCAAATTTTCACTaGTCATTATATCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAEANFH*SLYLCL
Trigger: CAAACAGAGATATAATGAGCAGTGAAAATTTGCCTC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp AGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTCTTATCCCTCTGAGTTaGCGAAAAGCTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SFLVYAHFSLGSYIRFDLLIPLS*RKAISA
Trigger: TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG...AAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGGCTCTGGTATATTTGTaGAGTAGGAGATGCAATATT +
Preference number: 4 (lower is better)
Translates to: SLILVALVYLCSRRCNILALVYL*SRRCNI
Trigger: AATATTGCATCTCCTACTGCACAAATATACCAGAGC...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATTGATCTTGGAAAGTTaGTCCCAAAAATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KRDGEILIPLSCRKAISALILES*SQKFFS
Trigger: AGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAA...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATAGAGTTTCTTGGTGTATaGTCATTTCTCTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAIEFLGV*SFLFRQ
Trigger: CTGCCTAAAGAGAAATGAGCATACACCAAGAAACTC...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp TTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTCATATGGAACTGAAGTaGTTCAGTAACTTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: FLHGCSEDYLSESQHSCFHMELK*FSNLSN
Trigger: GTTACTTAAGTTACTGAAGCACTTCAGTTCCATATG...AAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCATATGGAACTGAAGTaGTTCAGTAACTTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYHMELK*FSNLSN
Trigger: GTTACTTAAGTTACTGAAGCACTTCAGTTCCATATG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTTTCCAGTTGTTCATTaGAGTCAAGACATCGACCAA +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLFPVVH*SQDIDQ
Trigger: TTGGTCGATGTCTTGACTCCAATGAACAACTGGAAA...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGAAGACAAACTGGATTaGTTGTATATTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGEDKLD*LYIEGH
Trigger: ATGACCCTCAATATACAACCAATCCAGTTTGTCTTC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCACACAGAAGACAAACTaGATTGGTTGTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGTQKTN*IGCILR
Trigger: CCTCAATATACAACCAATCCAGTTTGTCTTCTGTGT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTACTTTACTGTTATTaGATCCATCACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGLLYCY*IHHCAL
Trigger: AAGGGCACAGTGATGGATCCAATAACAGTAAAGTAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTCAAGGCATTTAGTTTaGCCAATATCTTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYSRHLV*PISSVE
Trigger: TTCAACAGAAGATATTGGCCAAACTAAATGCCTTGA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGAAGTCCTGTTAACTTaGAGAGATCTCTCAATTTAC +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGEVLLT*RDLSIY
Trigger: GTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTGTTATCACATGGTTATaGCTTGCATCCAAATATTCA +
Preference number: 4 (lower is better)
Translates to: FLHGCSEDYLSESQHSCFVITWL*LASKYS
Trigger: TGAATATTTGGATGCAAGCCATAACCATGTGATAAC...AAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGTTATCACATGGTTATaGCTTGCATCCAAATATTCA +
Preference number: 4 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYVITWL*LASKYS
Trigger: TGAATATTTGGATGCAAGCCATAACCATGTGATAAC...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATCAAGGGTTATCACATaGTTATGGCTTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAISRVIT*LWLASK
Trigger: TTTGGATGCAAGCCATAACCATGTGATAACCCTTGA...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTCTAAATTGGTCGACTaGAATCAAATCCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGSKLVD*NQIHCS
Trigger: AGAACAGTGGATTTGATTCCAGTCGACCAATTTAGA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACAGTAGTTGTCTACTaGTTAAGTGAGTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTVVVY*LSESEA
Trigger: AGCCTCAGACTCACTTAACCAGTAGACAACTACTGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTGAAGGCACTTTCTaGTACAGTAGTTGTCTACTG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLEGTF*YSSCLL
Trigger: CAGTAGACAACTACTGTACCAGAAAGTGCCTTCAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTCAAGCCCTTCAACTTaGCTGATTTCATTACCCTGT +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSSSPST*LISLPC
Trigger: ACAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCAAGCCCTTCAACTTaGCTGATTTCATTACCCTGT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSSPST*LISLPC
Trigger: ACAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTTTCTACAAATTCACTaGATTGCCATACACTGTAAG +
Preference number: 4 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAFLQIH*IAIHCK
Trigger: CTTACAGTGTATGGCAATCCAGTGAATTTGTAGAAA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: YFCMDAPRIICQNPSILVRNISM*RCSIFL
Trigger: TAGAAAAATGCTACATCGCCACATGCTTATATTTCG...AACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTT +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGKAISA*MLRGLF
Trigger: AAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTATCTTGGTTGCTCTaGTATATTTGTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHLSWLL*YICAVG
Trigger: TCCTACTGCACAAATATACCAGAGCAACCAAGATAA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
3UTR CAA 72 bp TCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTaGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLGSYIRFDLGK*LPKILLLSWLL
Trigger: GAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTGATTTGCTTTGCTaGCACATCCAATGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLDLLC*HIQCVK
Trigger: TTTGACACATTGGATGTGTCAGCAAAGCAAATCAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGATAGTTGGATTGACTaGTGGATTCTTTTTCATGGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQDSWID*WILFHG
Trigger: CCCATGAAAAAGAATCCATCAGTCAATCCAACTATC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCGAGGAATGAACACTaGATTAACCATTGGATAGTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPRNEH*INHWIV
Trigger: AACTATCCAATGGTTAATTCAGTGTTCATTCCTCGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGCCATGGATTATGTTaGATATCAAGAGTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCHGLC*ISRVRR
Trigger: CCTTCTCACTCTTGATATTCAACATAATCCATGGCA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCTCTTCCCAACCAGTaGGAAGATTATTATTTATGC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQALPNQ*EDYYLC
Trigger: GCATAAATAATAATCTTCTCACTGGTTGGGAAGAGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAACCACTCAATGAAGTaGTTCTGTTGTTCTCAAGAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQNHSMK*FCCSQE
Trigger: CTCTTGAGAACAACAGAATCACTTCATTGAGTGGTT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGTGCATCTCCTGATTaGCAGCAATATAGTTATTGC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCASPD*QQYSYC
Trigger: GCAATAACTATATTGCTGTCAATCAGGAGATGCACA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCAGTTCTGGAAGATaGAATATTACAAACAACCGG +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAIFSSGR*NITNNR
Trigger: CCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAA...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTTCTTGCATTTGTTTaGAGTTGGAATGTCCTTGTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVLAFV*SWNVLV
Trigger: GACAAGGACATTCCAACTTCAAACAAATGCAAGAAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCCACTACCAATTCTTaGAGGACTACTAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSTTNS*RTTKLS
Trigger: TGACAACTTAGTAGTCCTTCAAGAATTGGTAGTGGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTAGATACTTATCCCTCTaGGTTGCCGAAAAGCTATTT +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSRYLSL*VAEKLF
Trigger: AAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCT...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR TCA 90 bp GGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: GKLLPKILLLSWLLWYICGDAIF*CDKRDG
Trigger: TCCATCTCTTTTATCACATCAGAATATTGCATCTCC...ACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGGGAGATGCAATATTCTaGTGTGATAAAAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLGDAIF*CDKRDG
Trigger: TCCATCTCTTTTATCACATCAGAATATTGCATCTCC...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR GCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGCTTCAATTTTCTCTATaGAGCACTCAGCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLLQFSL*STQQSK
Trigger: TTTGGATTGCTGAGTGCTGCATAGAGAAAATTGAAG...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTTCATAGCTGCTGTTaGTTCTTCTTCAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGFHSCC*FFFRNE
Trigger: TTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGAGTAATCCTTGTTCCTaGAATAAATTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLILVALVYLCSRRCNILSNPCS*NKFHSC
Trigger: GCAGCTATGAAATTTATTGCAGGAACAAGGATTACT...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATAGTAATCCTTGTTCCTaGAATAAATTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHSNPCS*NKFHSC
Trigger: GCAGCTATGAAATTTATTGCAGGAACAAGGATTACT...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGATGTTATCAAAGGTATaGTCTTCCCAACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQMLSKV*SSQPVR
Trigger: TCTCACTGGTTGGGAAGAGCATACCTTTGATAACAT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGATGTCCTTGTCGTTCTaGAATCATGTCAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQMSLSF*NHVRSK
Trigger: CTTACTTCTGACATGATTGCAGAACGACAAGGACAT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATGAGGCAAATTTTCACTaGTCATTATATCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHEANFH*SLYLCL
Trigger: CAAACAGAGATATAATGAGCAGTGAAAATTTGCCTC...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCAAAGATTGTAATTTaGCCAGTTCTCGTAGTCTGT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPKIVI*PVLVVC
Trigger: ACAGACTACGAGAACTGGGCAAATTACAATCTTTGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAGTTTCTTGGTGTATaGTCATTTCTCTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQEFLGV*SFLFRQ
Trigger: CTGCCTAAAGAGAAATGAGCATACACCAAGAAACTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTGAGTTTCTTGGTGTATaGTCATTTCTCTTTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSEFLGV*SFLFRQ
Trigger: CTGCCTAAAGAGAAATGAGCATACACCAAGAAACTC...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTTCCAGTTGTTCATTaGAGTCAAGACATCGACCAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFPVVH*SQDIDQ
Trigger: TTGGTCGATGTCTTGACTCCAATGAACAACTGGAAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCAAGGGTTATCACATaGTTATGGCTTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSRVIT*LWLASK
Trigger: TTTGGATGCAAGCCATAACCATGTGATAACCCTTGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTCAAGGGTTATCACATaGTTATGGCTTGCATCCAAA +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSSRVIT*LWLASK
Trigger: TTTGGATGCAAGCCATAACCATGTGATAACCCTTGA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp CTGAGAGTAGAGATAACGTCAAGTTTTTCCAGTTCTGTGATATCCTGGATTTTATATACTAAGTATCCGTaGTCTCTCCTCTTTAGTACT +
Preference number: 4 (lower is better)
Translates to: LRVEITSSFSSSVISWILYTKYP*SLLFST
Trigger: AGTACTAAAGAGGAGAGACCACGGATACTTAGTATA...TAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTATCTCTACTCTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHRNISM*RCSIFL
Trigger: TAGAAAAATGCTACATCGCCACATGCTTATATTTCG...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCATTTGTTATCTCTATaGGAGGAGTTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHLLSL*EEFSLG
Trigger: GCCAAGTGAAAACTCCTCCCATAGAGATAACAAATG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTCATTTGTTATCTCTATaGGAGGAGTTTTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: SFLVYAHFSLGSYIRFDLHLLSL*EEFSLG
Trigger: GCCAAGTGAAAACTCCTCCCATAGAGATAACAAATG...AAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGAAAGCTATTTCTGCATaGATGCTCCGAGGATTATTT +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLKAISA*MLRGLF
Trigger: AAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTATCTTGGTTGCTCTaGTATATTTGTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAILSWLL*YICAVG
Trigger: TCCTACTGCACAAATATACCAGAGCAACCAAGATAA...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp GCCATCCATAGGAGAGTGGGTAACAGGAATAAGATCAAAGATTCATTTATATTCTTATCTTGGTTGCTCTaGTATATTTGTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: AIHRRVGNRNKIKDSFIFLSWLL*YICAVG
Trigger: TCCTACTGCACAAATATACCAGAGCAACCAAGATAA...GAATATAAATGAATCTTTGATCTTATTCCTGTTACCCACTCTCCTATGGATGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS-3UTR CCA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTTATCTTGGTTGCTCTaGTATATTTGTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKLSWLL*YICAVG
Trigger: TCCTACTGCACAAATATACCAGAGCAACCAAGATAA...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGATTGGTTGTATATTaGGGGTCATTCAGACATAAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGLVVY*GSFRHK
Trigger: TTTATGTCTGAATGACCCTCAATATACAACCAATCC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTCTTCTTCAGAAATaGAGACTCCATTTAAATGGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLLLQK*RLHLNG
Trigger: CCCATTTAAATGGAGTCTTCATTTCTGAAGAAGAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTCAGTTCTGGAAGATaGAATATTACAAACAACCGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFSSGR*NITNNR
Trigger: CCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR TCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTCAGTTCTGGAAGATaGAATATTACAAACAACCGG +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSFSSGR*NITNNR
Trigger: CCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR TCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTGAATGAGGTAAGATaGTTGTTCTGTAGATTCACA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLNEVR*LFCRFT
Trigger: TGTGAATCTACAGAACAATCATCTTACCTCATTCAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTCAATTTTCTCTATaGAGCACTCAGCAATCCAAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLQFSL*STQQSK
Trigger: TTTGGATTGCTGAGTGCTGCATAGAGAAAATTGAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGTCATCAGATCGAGTaGCTTCTTCAAAATGGAAAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSHQIE*LLQNGN
Trigger: ATTTCCATTTTGAAGAAGGCACTCGATCTGATGACT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTGTCTGAAGAGCTCATaGTTAAGAGAGATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSCLKSS*LREIFF
Trigger: GAAGAAAATCTCTCTTAAGCATGAGCTCTTCAGACA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGTCTGAAGAGCTCATaGTTAAGAGAGATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCLKSS*LREIFF
Trigger: GAAGAAAATCTCTCTTAAGCATGAGCTCTTCAGACA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCACATGGTTATGGCTTaGATCCAAATATTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHMVMA*IQIFKV
Trigger: AACCTTGAATATTTGGATGCAAGCCATAACCATGTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTCTCTTATCTTGGTTaGTCTGGTATATTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFSYLG*SGIFVQ
Trigger: CTGCACAAATATACCAGAGCAACCAAGATAAGAGAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTTGATCTTGGAAAGTTaGTCCCAAAAATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: WKVAPKNSSLILVALVYLLILES*SQKFFS
Trigger: AGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAA...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAAGACAAACTGGATTaGTTGTATATTGAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQEDKLD*LYIEGH
Trigger: ATGACCCTCAATATACAACCAATCCAGTTTGTCTTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACACAGAAGACAAACTaGATTGGTTGTATATTGAGG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTQKTN*IGCILR
Trigger: CCTCAATATACAACCAATCCAGTTTGTCTTCTGTGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTACTTTACTGTTATTaGATCCATCACTGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLLYCY*IHHCAL
Trigger: AAGGGCACAGTGATGGATCCAATAACAGTAAAGTAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATCAAGGCATTTAGTTTaGCCAATATCTTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: ILLLSWLLWYICAVGDAISRHLV*PISSVE
Trigger: TTCAACAGAAGATATTGGCCAAACTAAATGCCTTGA...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAAGTCCTGTTAACTTaGAGAGATCTCTCAATTTAC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQEVLLT*RDLSIY
Trigger: GTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTATACTAAGTATCCGTaGTCTCTCCTCTTTAGTACT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQYTKYP*SLLFST
Trigger: AGTACTAAAGAGGAGAGACCACGGATACTTAGTATA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCTAAATTGGTCGACTaGAATCAAATCCACTGTTCT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSKLVD*NQIHCS
Trigger: AGAACAGTGGATTTGATTCCAGTCGACCAATTTAGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCACACATTTCTAAATTaGTCGACTGGAATCAAATCC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHTFLN*STGIKS
Trigger: GGATTTGATTCCAGTCGACCAATTTAGAAATGTGTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTCACACATTTCTAAATTaGTCGACTGGAATCAAATCC +
Preference number: 4 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSHTFLN*STGIKS
Trigger: GGATTTGATTCCAGTCGACCAATTTAGAAATGTGTG...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CCA 90 bp TTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTACGAAATATAAGCATGTaGCGATGTAGCATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLPKILLLSWLLWYICAVRNISM*RCSIFL
Trigger: TAGAAAAATGCTACATCGCCACATGCTTATATTTCG...TACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
3UTR CAA 72 bp GCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTaGGTGTATGCTCATTTCTCTTTAGGCAGTTACATT +
Preference number: 4 (lower is better)
Translates to: ASFCTTTKQVSF*VYAHFSLGSYI
Trigger: AATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000644811.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCAAGACATCGACCAATaGTATTTATTAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQQDIDQ*YLLDFQ
Trigger: CTGGAAATCTAATAAATAGCATTGGTCGATGTCTTG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTTCATAGCTGCTGTTaGTTCTTCTTCAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFHSCC*FFFRNE
Trigger: TTCATTTCTGAAGAAGAAGCAACAGCAGCTATGAAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGTAATCCTTGTTCCTaGAATAAATTTCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSNPCS*NKFHSC
Trigger: GCAGCTATGAAATTTATTGCAGGAACAAGGATTACT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGAGGCAAATTTTCACTaGTCATTATATCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQEANFH*SLYLCL
Trigger: CAAACAGAGATATAATGAGCAGTGAAAATTTGCCTC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTGATCTTGGAAAGTTaGTCCCAAAAATTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLILES*SQKFFS
Trigger: AGAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCATATGGAACTGAAGTaGTTCAGTAACTTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHMELK*FSNLSN
Trigger: GTTACTTAAGTTACTGAAGCACTTCAGTTCCATATG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR GCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTGATCTTGGAAAGTTaGTCCCAAAAATTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLILES*SQKFFN
Trigger: GTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445360.5
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCAAGGCATTTAGTTTaGCCAATATCTTCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSRHLV*PISSVE
Trigger: TTCAACAGAAGATATTGGCCAAACTAAATGCCTTGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTTATCACATGGTTATaGCTTGCATCCAAATATTCA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVITWL*LASKYS
Trigger: TGAATATTTGGATGCAAGCCATAACCATGTGATAAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CCA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQRNISM*RCSIFL
Trigger: TAGAAAAATGCTACATCGCCACATGCTTATATTTCG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CCA 90 bp TCCAGTCTCGCTCTCTCCCATTCATTATCTTTAGCTCTCGGGTCCTaGAAGCGCGGAGCCTCTCTGGCCTTGAGCCCCGAGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SSLALSHSLSLALGS*KRGASLALSPEGMA
Trigger: GGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTCCGCGCTTCCAGGACCCGAGAGCTAAAGATAATGAATGGGAGAGAGCGAGACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CCA 90 bp GCCAGTTCGCGGAACGTGACTGAAAGCAACGCGTTATGGGCAAGGTaGTGGGGACTTATTCGTTACCTCCTCCAGTCTCGCTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: ASSRNVTESNALWAR*WGLIRYLLQSRSLP
Trigger: TGGGAGAGAGCGAGACTGGAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CCA 90 bp AGTTCGCGGAACGTGACTGAAAGCAACGCGTTATGGGCAAGGTGGTaGGGACTTATTCGTTACCTCCTCCAGTCTCGCTCTCTCCCATTC +
Preference number: 5 (lower is better)
Translates to: SSRNVTESNALWARW*GLIRYLLQSRSLPF
Trigger: GAATGGGAGAGAGCGAGACTGGAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS-3UTR CAA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCGGAGCCTCTCTGGCCTaGAGCCCCGAGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: VRSQVMAESTRQKYICYLGASLA*SPEGMA
Trigger: GGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTCC...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS CCA 90 bp TATAACTTCGCCAGTTCGCGGAACGTGACTGAAAGCAACGCGTTATaGGCAAGGTGGTGGGGACTTATTCGTTACCTCCTCCAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: YNFASSRNVTESNAL*ARWWGLIRYLLQSR
Trigger: GCGAGACTGGAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CCA 90 bp ATTTTCTTCGCCAGTTCGCGGAACGTGACTGAAAGCAACGCGTTATaGGCAAGGTGGTGGGGACTTATTCGTTACCTCCTCCAGTCTCGC +
Preference number: 5 (lower is better)
Translates to: IFFASSRNVTESNAL*ARWWGLIRYLLQSR
Trigger: GCGAGACTGGAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454474.2
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATGGAGCCTCTCTGGCCTaGAGCCCCGAGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHGASLA*SPEGMA
Trigger: GGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTCC...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGAGCCTCTCTGGCCTaGAGCCCCGAGGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGASLA*SPEGMA
Trigger: GGCCATGCCCTCGGGGCTCAAGGCCAGAGAGGCTCC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCCCTTTGCCCGAGCCCTaGAGTTCAGCCAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: VRSQVMAESTRQKYICYLPLPEP*SSASSR
Trigger: ACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGG...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS TCA 90 bp TTCTTGAAGACCTTCAATTTTCTTCGCCAGTTCGCGGAACGTGACTaGAAGCAACGCGTTATGGGCAAGGTGGTGGGGACTTATTCGTTA +
Preference number: 5 (lower is better)
Translates to: FLKTFNFLRQFAERD*KQRVMGKVVGTYSL
Trigger: TAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGAAAATTGAAGGTCTTCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454474.2
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATCCATCACTGTGCCCTTaGCCCGAGCCCTTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYPSLCP*PEPLSS
Trigger: TGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGG...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS GCA 90 bp AGTGTTTCAGGATCAGTTACTTTACTGTTATTGGATCCATCACTGTaGCCTTTGCCCGAGCCCTTGAGTTCAGCCAGTTCTCGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: SVSGSVTLLLLDPSL*PLPEPLSSASSRSK
Trigger: TTTGGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGTAACTGATCCTGAAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS-3UTR CAA 90 bp ACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTCCATCACTGTGCCCTTaGCCCGAGCCCTTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TTTKQVSFLVYAHFSLGSPSLCP*PEPLSS
Trigger: TGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGG...ACTGCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTAGTCAAGCCCTTCAACTaGGCTGATTTCATTACCCTG +
Preference number: 5 (lower is better)
Translates to: LIPLSCRKAISAWMLRGLVKPFN*ADFITL
Trigger: CAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGAC...TAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTTGCTCCGAGGATTATTaGTCAGAATCCCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: PSELPKSYFCMDAPRIICCSEDY*SESQHS
Trigger: AGAATGCTGGGATTCTGACAAATAATCCTCGGAGCA...ACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCTTTGCCCGAGCCCTaGAGTTCAGCCAGTTCTCGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPLPEP*SSASSR
Trigger: ACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCCATCACTGTGCCCTTaGCCCGAGCCCTTGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQPSLCP*PEPLSS
Trigger: TGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp CTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTAATGATGGCTTCTTTTTaGAGAGGCAGCTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LIPLSCRKAISAWMLRGLMMASF*RGSLLV
Trigger: AACAAGCAAGCTGCCTCTCAAAAAAGAAGCCATCAT...TAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTAGCAGTTACATTCGATTaGATCTTGGAAAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: LIPLSCRKAISAWMLRGLAVTFD*ILESCS
Trigger: GGAGCAACTTTCCAAGATCAAATCGAATGTAACTGC...TAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp AAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCACCTGCGTCAGAATTTaGGCAGAAGGCCATATACTA +
Preference number: 5 (lower is better)
Translates to: KAISAWMLRGLFVRIPAFTCVRI*AEGHIL
Trigger: TAGTATATGGCCTTCTGCCAAAATTCTGACGCAGGT...GAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGCTGTCCATAGCCACTaGAAGGCACTTTCTGGTACA +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGAVHSH*KALSGT
Trigger: TGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATGCTGTCCATAGCCACTaGAAGGCACTTTCTGGTACA +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHAVHSH*KALSGT
Trigger: TGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGC...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGTCAAGCCCTTCAACTaGGCTGATTTCATTACCCTG +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAVKPFN*ADFITL
Trigger: CAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGAC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp TTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCACCAAAGATTGTAATTaGCCCAGTTCTCGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: LPKSYFCMDAPRIICQNPTKDCN*PSSRSL
Trigger: CAGACTACGAGAACTGGGCAAATTACAATCTTTGGT...GGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTGTTACTTTACTGTTATaGGATCCATCACTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: VMAESTRQKYICYLYGRSVTLLL*DPSLCP
Trigger: AGGGCACAGTGATGGATCCAATAACAGTAAAGTAAC...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGAGTTTTGGTCGGGCCTaGATTCTGGGCTCCATTTTT +
Preference number: 5 (lower is better)
Translates to: SLILVALVYLCSRRCNILSFGRA*ILGSIF
Trigger: AAAAATGGAGCCCAGAATCAAGGCCCGACCAAAACT...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATAGTTTTGGTCGGGCCTaGATTCTGGGCTCCATTTTT +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHSFGRA*ILGSIF
Trigger: AAAAATGGAGCCCAGAATCAAGGCCCGACCAAAACT...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp CAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGGTGCCAATAAAGAACTaGGTTTGGCAAAAGCACTGT +
Preference number: 5 (lower is better)
Translates to: QVMAESTRQKYICYLYGRVPIKN*VWQKHC
Trigger: ACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCAC...CCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTACTTATCCCTCTGAGTaGCCGAAAAGCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: YFCMDAPRIICQNPSILVTYPSE*PKSYFC
Trigger: GCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGT...AACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp ATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCATGGATGCTCCGAGGAACATTCGATTTGATCTaGGAAAGTTGCTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: ILIPLSCRKAISAWMLRGTFDLI*ESCSQK
Trigger: TTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGT...TCCTCGGAGCATCCATGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp GTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTCTCGAGTTTTTCTTaGCTTGTAGTTCAGCGAGGT +
Preference number: 5 (lower is better)
Translates to: VMAESTRQKYICYLYGRSFSSFS*LVVQRG
Trigger: ACCTCGCTGAACTACAAGCAAAGAAAAACTCGAGAA...ACTCCTCCCATAGAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGTTACTTTACTGTTATaGGATCCATCACTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAVTLLL*DPSLCP
Trigger: AGGGCACAGTGATGGATCCAATAACAGTAAAGTAAC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp TATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTTTTGAGAGGCAGCTaGCTTGTTTCACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: YFCMDAPRIICQNPSILVFLRGS*LVSLSL
Trigger: CAAAGACAGTGAAACAAGCAAGCTGCCTCTCAAAAA...AACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTATGATGGCTTCTTTTTaGAGAGGCAGCTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAMMASF*RGSLLV
Trigger: AACAAGCAAGCTGCCTCTCAAAAAAGAAGCCATCAT...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTCAAAGACAAACCACTaGCACTGCCGAACACTGCAA +
Preference number: 5 (lower is better)
Translates to: WKVAPKNSSLILVALVYLSKTNH*HCRTLQ
Trigger: TTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGA...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCTGTCCATAGCCACTaGAAGGCACTTTCTGGTACA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQAVHSH*KALSGT
Trigger: TGTACCAGAAAGTGCCTTCAAGTGGCTATGGACAGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTACCAAAGATTGTAATTaGCCCAGTTCTCGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYATKDCN*PSSRSL
Trigger: CAGACTACGAGAACTGGGCAAATTACAATCTTTGGT...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp GGCAGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATTACAAATTCACTGGATaGCCATACACTGTAAGCTCC +
Preference number: 5 (lower is better)
Translates to: GRSTFVISMGGVFTWPNDYKFTG*PYTVSS
Trigger: GGAGCTTACAGTGTATGGCAATCCAGTGAATTTGTA...ATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp AAAGCTATTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: KAISAWMLRGLFVRIPAFGEIQL*PYHLNS
Trigger: TGAATTCAGATGATAGGGCAAAAGCTGAATTTCACC...GAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAATAGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTGCTCCGAGGATTATTaGTCAGAATCCCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHCSEDY*SESQHS
Trigger: AGAATGCTGGGATTCTGACAAATAATCCTCGGAGCA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp CTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGATGACTTATCCCTCTGAGTaGCCGAAAAGCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LILVALVYLCSRRCNILMTYPSE*PKSYFC
Trigger: GCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGT...CATCAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGACTTATCCCTCTGAGTaGCCGAAAAGCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SLILVALVYLCSRRCNILTYPSE*PKSYFC
Trigger: GCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGT...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCACTTATCCCTCTGAGTaGCCGAAAAGCTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGTYPSE*PKSYFC
Trigger: GCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp TTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTGTTGCTCTGGTATATTaGTGCAGTAGGAGATGCAAT +
Preference number: 5 (lower is better)
Translates to: FLHGCSEDYLSESQHSCFVALVY*CSRRCN
Trigger: ATTGCATCTCCTACTGCACAAATATACCAGAGCAAC...AAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGGCCAATATCTTCTGTaGAAGACTTGGTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGGQYLL*KTWFFS
Trigger: ACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp GTCAGATCCCAAGTAATGGCTGAATCCACTAGGCAGAAGTACATTTGTTATCTCAGTCTCAGAATACGGTaGTTAACTTTAATGATGCGT +
Preference number: 5 (lower is better)
Translates to: VRSQVMAESTRQKYICYLSLRIR*LTLMMR
Trigger: ACGCATCATTAAAGTTAACAACCGTATTCTGAGACT...GAGATAACAAATGTACTTCTGCCTAGTGGATTCAGCCATTACTTGGGATCTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTTTTGAGAGGCAGCTaGCTTGTTTCACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGFLRGS*LVSLSL
Trigger: CAAAGACAGTGAAACAAGCAAGCTGCCTCTCAAAAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCAAAGACAAACCACTaGCACTGCCGAACACTGCAA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSKTNH*HCRTLQ
Trigger: TTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTCAAAGACAAACCACTaGCACTGCCGAACACTGCAA +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSSKTNH*HCRTLQ
Trigger: TTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGTTTTGGTCGGGCCTaGATTCTGGGCTCCATTTTT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSFGRA*ILGSIF
Trigger: AAAAATGGAGCCCAGAATCAAGGCCCGACCAAAACT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTTCACATGGTTATGGCTaGCATCCAAATATTCAAGGT +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYASHGYG*HPNIQG
Trigger: ACCTTGAATATTTGGATGCAAGCCATAACCATGTGA...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTCACATGGTTATGGCTaGCATCCAAATATTCAAGGT +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYSHGYG*HPNIQG
Trigger: ACCTTGAATATTTGGATGCAAGCCATAACCATGTGA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATAATGAGGTCCTAACTTaGAAACCTGCGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYNEVLT*KPASEF
Trigger: AAATTCTGACGCAGGTTTCAAAGTTAGGACCTCATT...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATAATGAAGTGATTCTGTaGTTCTCAAGAGAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYNEVIL*FSRESE
Trigger: CTCGCTTTCTCTTGAGAACAACAGAATCACTTCATT...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGTCTCTGATGGTTCAATaGGTATCCCATCCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: SLILVALVYLCSRRCNILSLMVQ*VSHPKL
Trigger: AAGCTTTGGATGGGATACCAATTGAACCATCAGAGA...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCTAAACTGTGCATTATaGGAGGCAAATTTTCACTGC +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYALNCAL*EANFHC
Trigger: GCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAG...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTCAAGCCCTTCAACTaGGCTGATTTCATTACCCTG +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVKPFN*ADFITL
Trigger: CAGGGTAATGAAATCAGCCAAGTTGAAGGGCTTGAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TTTCTGCATGGATGCTCCGAGGATTATTTGTCAGAATCCCAGCATTCTTGTTTTGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: FLHGCSEDYLSESQHSCFGEIQL*PYHLNS
Trigger: TGAATTCAGATGATAGGGCAAAAGCTGAATTTCACC...AAAACAAGAATGCTGGGATTCTGACAAATAATCCTCGGAGCATCCATGCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp CTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: LSASFCTTTKQVSFLVYAGEIQL*PYHLNS
Trigger: TGAATTCAGATGATAGGGCAAAAGCTGAATTTCACC...AGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGTGCTCCGAGGATTATTaGTCAGAATCCCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKCSEDY*SESQHS
Trigger: AGAATGCTGGGATTCTGACAAATAATCCTCGGAGCA...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCGTTGCTCTGGTATATTaGTGCAGTAGGAGATGCAAT +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGVALVY*CSRRCN
Trigger: ATTGCATCTCCTACTGCACAAATATACCAGAGCAAC...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS TCA 90 bp GTTACCCTTTCATTCAAGGCATTTAGTTTGGCCAATATCTTCTGTTaGAGACTTGGTTCTTCAGTGACAGTTTCACAACTCTTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: VTLSFKAFSLANIFC*RLGSSVTVSQLFSV
Trigger: AACACTGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCCAAACTAAATGCCTTGAATGAAAGGGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS TCA 90 bp ATAATGTTACTTCTCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTATCATCTGAATTCACAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: IMLLLEFFFACSSAR*NSAFALSSEFTGLP
Trigger: TGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGAGAAGTAACATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS CCA 90 bp TGCTTCAGTTTCATCAGACCTCTAAATCCCTCAAGGGTTATCACATaGTTATGGCTTGCATCCAAATATTCAAGGTTATACAAGTGGTAT +
Preference number: 5 (lower is better)
Translates to: CFSFIRPLNPSRVIT*LWLASKYSRLYKWY
Trigger: ATACCACTTGTATAACCTTGAATATTTGGATGCAAGCCATAACCATGTGATAACCCTTGAGGGATTTAGAGGTCTGATGAAACTGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCCGAAGTCCTGTTAACTaGGAGAGATCTCTCAATTTA +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGRSPVN*ERSLNL
Trigger: TAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCG...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACCTGCGTCAGAATTTaGGCAGAAGGCCATATACTA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTCVRI*AEGHIL
Trigger: TAGTATATGGCCTTCTGCCAAAATTCTGACGCAGGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTGCATTTGTTTGAAGTaGGAATGTCCTTGTCGTTCT +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGCICLK*ECPCRS
Trigger: AGAACGACAAGGACATTCCAACTTCAAACAAATGCA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp AAAAGAGATGGAGAGATACTTATCCCTCTGAGTTGCCGAAAAGCTATTTCTGCAACACACATTTCTAAATaGGTCGACTGGAATCAAATC +
Preference number: 5 (lower is better)
Translates to: KRDGEILIPLSCRKAISATHISK*VDWNQI
Trigger: GATTTGATTCCAGTCGACCAATTTAGAAATGTGTGT...TGCAGAAATAGCTTTTCGGCAACTCAGAGGGATAAGTATCTCTCCATCTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATACACACATTTCTAAATaGGTCGACTGGAATCAAATC +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYTHISK*VDWNQI
Trigger: GATTTGATTCCAGTCGACCAATTTAGAAATGTGTGT...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTGCTCCGAGGATTATTaGTCAGAATCCCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSCSEDY*SESQHS
Trigger: AGAATGCTGGGATTCTGACAAATAATCCTCGGAGCA...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGGTTGCTCTGGTATATTaGTGCAGTAGGAGATGCAAT +
Preference number: 5 (lower is better)
Translates to: WKVAPKNSSLILVALVYLVALVY*CSRRCN
Trigger: ATTGCATCTCCTACTGCACAAATATACCAGAGCAAC...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp CCACTGTCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATTTTGATCTTGGAAAGTaGCTCCCAAAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: PLSASFCTTTKQVSFLVYFDLGK*LPKILL
Trigger: GAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAA...ATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGACAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp GGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTTACATTCGATTaGATCTTGGAAAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: GKLLPKILLLSWLLWYICAVTFD*ILESCS
Trigger: GGAGCAACTTTCCAAGATCAAATCGAATGTAACTGC...ACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp AAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCGCAGTTACATTCGATTaGATCTTGGAAAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: KVAPKNSSLILVALVYLCAVTFD*ILESCS
Trigger: GGAGCAACTTTCCAAGATCAAATCGAATGTAACTGC...GCACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS TCA 90 bp CATTTAGTTTGGCCAATATCTTCTGTTGAAGACTTGGTTCTTCAGTaGCAGTTTCACAACTCTTCAGTGTTTCAGGATCAGTTACTTTAC +
Preference number: 5 (lower is better)
Translates to: HLVWPISSVEDLVLQ*QFHNSSVFQDQLLY
Trigger: GTAAAGTAACTGATCCTGAAACACTGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCCAAACTAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CCA 90 bp CTTCCATCTAACATCTGTAAGTTAGGCAGTCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTACAAATTGGATTGCCATACACTGTA +
Preference number: 5 (lower is better)
Translates to: LPSNICKLGSRNISM*RCSIFLQIGLPYTV
Trigger: TACAGTGTATGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTTAGATGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445360.5
ENST00000568404.1
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTTACTTTACTGTTATaGGATCCATCACTGTGCCCT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVTLLL*DPSLCP
Trigger: AGGGCACAGTGATGGATCCAATAACAGTAAAGTAAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGCCAATATCTTCTGTaGAAGACTTGGTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGQYLL*KTWFFS
Trigger: ACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTCTCAGAATACGGTaGTTAACTTTAATGATGCGT +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGSLRIR*LTLMMR
Trigger: ACGCATCATTAAAGTTAACAACCGTATTCTGAGACT...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTTTTTGAGAGGCAGCTaGCTTGTTTCACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQFLRGS*LVSLSL
Trigger: CAAAGACAGTGAAACAAGCAAGCTGCCTCTCAAAAA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGATGATGGCTTCTTTTTaGAGAGGCAGCTTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQMMASF*RGSLLV
Trigger: AACAAGCAAGCTGCCTCTCAAAAAAGAAGCCATCAT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTACGAAGTCCTGTTAACTaGGAGAGATCTCTCAATTTA +
Preference number: 5 (lower is better)
Translates to: LLPKILLLSWLLWYICAVRSPVN*ERSLNL
Trigger: TAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCG...TACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp CTGAGAGTAGAGATAACGTCAAGTTTTTCCAGTTCTGTGATATCCTGGATTTTAAATGAGGTCCTAACTTaGAAACCTGCGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: LRVEITSSFSSSVISWILNEVLT*KPASEF
Trigger: AAATTCTGACGCAGGTTTCAAAGTTAGGACCTCATT...TAAAATCCAGGATATCACAGAACTGGAAAAACTTGACGTTATCTCTACTCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGAATGAAGTGATTCTGTaGTTCTCAAGAGAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKNEVIL*FSRESE
Trigger: CTCGCTTTCTCTTGAGAACAACAGAATCACTTCATT...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCTCTGATGGTTCAATaGGTATCCCATCCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSLMVQ*VSHPKL
Trigger: AAGCTTTGGATGGGATACCAATTGAACCATCAGAGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATACTAAACTGTGCATTATaGGAGGCAAATTTTCACTGC +
Preference number: 5 (lower is better)
Translates to: ILLLSWLLWYICAVGDAILNCAL*EANFHC
Trigger: GCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAG...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGTGCCAATAAAGAACTaGGTTTGGCAAAAGCACTGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQVPIKN*VWQKHC
Trigger: ACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCAC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTGTGCCAATAAAGAACTaGGTTTGGCAAAAGCACTGT +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSVPIKN*VWQKHC
Trigger: ACAGTGCTTTTGCCAAACCAAGTTCTTTATTGGCAC...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACCAAAGATTGTAATTaGCCCAGTTCTCGTAGTCTG +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTKDCN*PSSRSL
Trigger: CAGACTACGAGAACTGGGCAAATTACAATCTTTGGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTGATCTTGGAAAGGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: LVYAHFSLGSYIRFDLGKGEIQL*PYHLNS
Trigger: TGAATTCAGATGATAGGGCAAAAGCTGAATTTCACC...CTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp AAGATCAAAGATTCATTTATATTCTCTACCGTGGTCCAGGTCTTCATAACATCTGTTGCTCTGGTATATTaGTGCAGTAGGAGATGCAAT +
Preference number: 5 (lower is better)
Translates to: KIKDSFIFSTVVQVFITSVALVY*CSRRCN
Trigger: ATTGCATCTCCTACTGCACAAATATACCAGAGCAAC...AGATGTTATGAAGACCTGGACCACGGTAGAGAATATAAATGAATCTTTGATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS-3UTR CAA 90 bp TGTAGCCCAAATGAAGAACTTCTAAACTGTGCATTATTGGAGGCAAATTTTCACCTTCTCTTATCTTGGTaGCTCTGGTATATTTGTGCA +
Preference number: 5 (lower is better)
Translates to: CSPNEELLNCALLEANFHLLLSW*LWYICA
Trigger: TGCACAAATATACCAGAGCAACCAAGATAAGAGAAG...GTGAAAATTTGCCTCCAATAATGCACAGTTTAGAAGTTCTTCATTTGGGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp TGGAAAGTTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGCTTCTCTTATCTTGGTaGCTCTGGTATATTTGTGCA +
Preference number: 5 (lower is better)
Translates to: WKVAPKNSSLILVALVYLLLLSW*LWYICA
Trigger: TGCACAAATATACCAGAGCAACCAAGATAAGAGAAG...CAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAACTTTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATATTCTGTTTGATCTTGGAAAGTaGCTCCCAAAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SLILVALVYLCSRRCNILFDLGK*LPKILL
Trigger: GAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAA...CAGAATATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000568404.1
ENST00000644811.1
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTTGATCTTGGAAAGTaGCTCCCAAAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHFDLGK*LPKILL
Trigger: GAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAA...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp TGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTTTAGGCTTTGATCTTGGAAAGTaGCTCCCAAAAATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: CTTTKQVSFLVYAHFSLGFDLGK*LPKILL
Trigger: GAGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAA...GCCTAAAGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp TCCGCTAGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATACATTCGATTTGATCTaGGAAAGTTGCTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: SASFCTTTKQVSFLVYAHTFDLI*ESCSQK
Trigger: TTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGT...ATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACTAGCGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS-3UTR CAA 90 bp AGAAGTACATTTGTTATCTCTATGGGAGGAGTTTTCACTTGGCCAAATGATCTGACATTCGATTTGATCTaGGAAAGTTGCTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: RSTFVISMGGVFTWPNDLTFDLI*ESCSQK
Trigger: TTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGT...CAGATCATTTGGCCAAGTGAAAACTCCTCCCATAGAGATAACAAATGTACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000568404.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGCAGTTACATTCGATTaGATCTTGGAAAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQAVTFD*ILESCS
Trigger: GGAGCAACTTTCCAAGATCAAATCGAATGTAACTGC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTGCAGTTACATTCGATTaGATCTTGGAAAGTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSAVTFD*ILESCS
Trigger: GGAGCAACTTTCCAAGATCAAATCGAATGTAACTGC...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS TCA 90 bp TTTCTTGGTGTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCCAAAAATTCTTCAACTTCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: FLGVCSFLFRQLHSI*SWKVAPKNSSTSGV
Trigger: AACTCCTGAAGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATACACCAAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445360.5
CDS-3UTR CAA 90 bp ATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAGGAGATGCAATACATTGGATAGTTGGATaGACTGATGGATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ILLLSWLLWYICAVGDAIHWIVG*TDGFFF
Trigger: GAAAAAGAATCCATCAGTCAATCCAACTATCCAATG...TATTGCATCTCCTACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCGAAGTCCTGTTAACTaGGAGAGATCTCTCAATTTA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQRSPVN*ERSLNL
Trigger: TAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTCACATGGTTATGGCTaGCATCCAAATATTCAAGGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSHGYG*HPNIQG
Trigger: ACCTTGAATATTTGGATGCAAGCCATAACCATGTGA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAATGAGGTCCTAACTTaGAAACCTGCGTCAGAATTT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQNEVLT*KPASEF
Trigger: AAATTCTGACGCAGGTTTCAAAGTTAGGACCTCATT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAATGAAGTGATTCTGTaGTTCTCAAGAGAAAGCGAG +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQNEVIL*FSRESE
Trigger: CTCGCTTTCTCTTGAGAACAACAGAATCACTTCATT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGTGCATTTGTTTGAAGTaGGAATGTCCTTGTCGTTCT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQCICLK*ECPCRS
Trigger: AGAACGACAAGGACATTCCAACTTCAAACAAATGCA...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp TTGCTCCCAAAAATTCTTCTCTTATCTTGGTTGCTCTGGTATATTTGTGCAGTAAGTTCTTGCATTTGTTaGAAGTTGGAATGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: LLPKILLLSWLLWYICAVSSCIC*KLECPC
Trigger: ACAAGGACATTCCAACTTCAAACAAATGCAAGAACT...TACTGCACAAATATACCAGAGCAACCAAGATAAGAGAAGAATTTTTGGGAGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTAAACTGTGCATTATaGGAGGCAAATTTTCACTGC +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLNCAL*EANFHC
Trigger: GCAGTGAAAATTTGCCTCCAATAATGCACAGTTTAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQGEIQL*PYHLNS
Trigger: TGAATTCAGATGATAGGGCAAAAGCTGAATTTCACC...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCTTCTCTTATCTTGGTaGCTCTGGTATATTTGTGCA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQLLLSW*LWYICA
Trigger: TGCACAAATATACCAGAGCAACCAAGATAAGAGAAG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGTCTCAGAATACGGTaGTTAACTTTAATGATGCGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSLRIR*LTLMMR
Trigger: ACGCATCATTAAAGTTAACAACCGTATTCTGAGACT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGCATTGGATAGTTGGATaGACTGATGGATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQHWIVG*TDGFFF
Trigger: GAAAAAGAATCCATCAGTCAATCCAACTATCCAATG...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTCATTGGATAGTTGGATaGACTGATGGATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSHWIVG*TDGFFF
Trigger: GAAAAAGAATCCATCAGTCAATCCAACTATCCAATG...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254271.8
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGAGTTCTTGCATTTGTTaGAAGTTGGAATGTCCTTGT +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQSSCIC*KLECPC
Trigger: ACAAGGACATTCCAACTTCAAACAAATGCAAGAACT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACACACATTTCTAAATaGGTCGACTGGAATCAAATC +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTHISK*VDWNQI
Trigger: GATTTGATTCCAGTCGACCAATTTAGAAATGTGTGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp ATCAAGTTCATGAAGGGTAATAGATTATCTTCATATGGAACTGAAGTGCTTCAGACATTCGATTTGATCTaGGAAAGTTGCTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: IKFMKGNRLSSYGTEVLQTFDLI*ESCSQK
Trigger: TTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGT...CTGAAGCACTTCAGTTCCATATGAAGATAATCTATTACCCTTCATGAACTTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS-3UTR CAA 90 bp AGTTTTTGTACAACTACTAAACAGGTGAGTTTCTTGGTGTATGCTCATTTCTCTACATTCGATTTGATCTaGGAAAGTTGCTCCCAAAAA +
Preference number: 5 (lower is better)
Translates to: SFCTTTKQVSFLVYAHFSTFDLI*ESCSQK
Trigger: TTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGT...AGAGAAATGAGCATACACCAAGAAACTCACCTGTTTAGTAGTTGTACAAAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000644811.1
ENST00000647410.1
CDS CAA 72 bp CAAGTCCGAGTCCACTCCGATTTCCCAATCCCTGTCTaGCAGCAGAAGGTAGGAAACCCTCTCCCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: QVRVHSDFPIPV*QQKVGNPLPPQ
Trigger: CTGGGGCGGGAGAGGGTTTCCTACCTTCTGCTGCAAGACAGGGATTGGGAAATCGGAGTGGACTCGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570145.1
CDS CAA 90 bp AATCCGATTCAAGTCCGAGTCCACTCCGATTTCCCAATCCCTGTCTaGCAGCAGAAGGTAGGAAACCCTCTCCCGCCCCAGGCCTGGTGT +
Preference number: 6 (lower is better)
Translates to: NPIQVRVHSDFPIPV*QQKVGNPLPPQAWC
Trigger: ACACCAGGCCTGGGGCGGGAGAGGGTTTCCTACCTTCTGCTGCAAGACAGGGATTGGGAAATCGGAGTGGACTCGGACTTGAATCGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570145.1
CDS CCA 72 bp GCCAGTTCGCGGAACGTGACTGAAAGCAACGCGTTATaGGCAAGGTGGTGGGGACTTATTCGTTACCTCCTC +
Preference number: 6 (lower is better)
Translates to: ASSRNVTESNAL*ARWWGLIRYLL
Trigger: GAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS TCA 72 bp ACCTTCAATTTTCTTCGCCAGTTCGCGGAACGTGACTaGAAGCAACGCGTTATGGGCAAGGTGGTGGGGACT +
Preference number: 6 (lower is better)
Translates to: TFNFLRQFAERD*KQRVMGKVVGT
Trigger: AGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGAAAATTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454474.2
CDS TCA 72 bp GAAGACCTTCAATTTTCTTCGCCAGTTCGCGGAACGTaGCTGAAAGCAACGCGTTATGGGCAAGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: EDLQFSSPVRGT*LKATRYGQGGG
Trigger: CCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGAAAATTGAAGGTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454474.2
CDS CCA 72 bp AACGTGACTGAAAGCAACGCGTTATGGGCAAGGTGGTaGGGACTTATTCGTTACCTCCTCCAGTCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: NVTESNALWARW*GLIRYLLQSRS
Trigger: AGAGCGAGACTGGAGGAGGTAACGAATAAGTCCCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 72 bp GTTACTTTACTGTTATTGGATCCATCACTGTGCCCTTaGCCCGAGCCCTTGAGTTCAGCCAGTTCTCGTTCC +
Preference number: 6 (lower is better)
Translates to: VTLLLLDPSLCP*PEPLSSASSRS
Trigger: GGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS TCA 72 bp GATCATAATATTATAACTTCGCCAGTTCGCGGAACGTaGCTGAAAGCAACGCGTTATGGGCAAGGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: DHNIITSPVRGT*LKATRYGQGGG
Trigger: CCCACCACCTTGCCCATAACGCGTTGCTTTCAGTCACGTTCCGCGAACTGGCGAAGTTATAATATTATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS TCA 72 bp TATTGGATCCATCACTGTGCCCTTTGCCCGAGCCCTTaGGTTCAGCCAGTTCTCGTTCCAAAGTTTTCTTCA +
Preference number: 6 (lower is better)
Translates to: YWIHHCALCPSP*VQPVLVPKFSS
Trigger: TGAAGAAAACTTTGGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS GCA 72 bp GGATCAGTTACTTTACTGTTATTGGATCCATCACTGTaGCCTTTGCCCGAGCCCTTGAGTTCAGCCAGTTCT +
Preference number: 6 (lower is better)
Translates to: GSVTLLLLDPSL*PLPEPLSSASS
Trigger: AGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGTAACTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 72 bp TTATTGGATCCATCACTGTGCCCTTTGCCCGAGCCCTaGAGTTCAGCCAGTTCTCGTTCCAAAGTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLDPSLCPLPEP*SSASSRSKVFF
Trigger: GAAGAAAACTTTGGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 90 bp ACTTTACTGTTATTGGATCCATCACTGTGCCCTTTGCCCGAGCCCTaGAGTTCAGCCAGTTCTCGTTCCAAAGTTTTCTTCACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: TLLLLDPSLCPLPEP*SSASSRSKVFFTKL
Trigger: CAGCTTTGTGAAGAAAACTTTGGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 90 bp TCAGGATCAGTTACTTTACTGTTATTGGATCCATCACTGTGCCCTTaGCCCGAGCCCTTGAGTTCAGCCAGTTCTCGTTCCAAAGTTTTC +
Preference number: 6 (lower is better)
Translates to: SGSVTLLLLDPSLCP*PEPLSSASSRSKVF
Trigger: GAAAACTTTGGAACGAGAACTGGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGTAACTGATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 90 bp GTTTCACAACTCTTCAGTGTTTCAGGATCAGTTACTTTACTGTTATaGGATCCATCACTGTGCCCTTTGCCCGAGCCCTTGAGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: VSQLFSVSGSVTLLL*DPSLCPLPEPLSSA
Trigger: GGCTGAACTCAAGGGCTCGGGCAAAGGGCACAGTGATGGATCCAATAACAGTAAAGTAACTGATCCTGAAACACTGAAGAGTTGTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS GCA 72 bp CCGGCAAAACAAGGTCATGATCAAAGACAAACCACTTaGACTGCCGAACACTGCAATCACAGTTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: PAKQGHDQRQTT*TAEHCNHSFFV
Trigger: GACAAAGAAACTGTGATTGCAGTGTTCGGCAGTGCAAGTGGTTTGTCTTTGATCATGACCTTGTTTTGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS TCA 72 bp TGCTGTGGTATCTGCCAGTTCCTTGATTTGCTTTGCTaGCACATCCAATGTGTCAAATCTTTGAAGGCAAGG +
Preference number: 6 (lower is better)
Translates to: CCGICQFLDLLC*HIQCVKSLKAR
Trigger: CCTTGCCTTCAAAGATTTGACACATTGGATGTGTCAGCAAAGCAAATCAAGGAACTGGCAGATACCACAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS TCA 72 bp AGCCTCAATGTGGCTGGCTTTTGCCATGGATTATGTTaGATATCAAGAGTGAGAAGGCTTGTGGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: SLNVAGFCHGLC*ISRVRRLVVCL
Trigger: CAAACACACCACAAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CAA 72 bp CAGCCTCAATGTGGCTGGCTTTTGCCATGGATTATGTaGAATATCAAGAGTGAGAAGGCTTGTGGTGTGTTT +
Preference number: 6 (lower is better)
Translates to: QPQCGWLLPWIM*NIKSEKACGVF
Trigger: AAACACACCACAAGCCTTCTCACTCTTGATATTCAACATAATCCATGGCAAAAGCCAGCCACATTGAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS TCA 72 bp TGGCCAATATCTTCTGTTGAAGACTTGGTTCTTCAGTaGCAGTTTCACAACTCTTCAGTGTTTCAGGATCAG +
Preference number: 6 (lower is better)
Translates to: WPISSVEDLVLQ*QFHNSSVFQDQ
Trigger: CTGATCCTGAAACACTGAAGAGTTGTGAAACTGTCACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 90 bp TCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTGAAATTCAGCTTTaGCCCTATCATCTGAATTCACAGGACTTCCATCTAACATCTGTA +
Preference number: 6 (lower is better)
Translates to: SSFSLLVVQRGEIQL*PYHLNSQDFHLTSV
Trigger: TACAGATGTTAGATGGAAGTCCTGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS TCA 72 bp CTTCTCGAGTTTTTCTTTGCTTGTAGTTCAGCGAGGTaGAATTCAGCTTTTGCCCTATCATCTGAATTCACA +
Preference number: 6 (lower is better)
Translates to: LLEFFFACSSAR*NSAFALSSEFT
Trigger: TGTGAATTCAGATGATAGGGCAAAAGCTGAATTTCACCTCGCTGAACTACAAGCAAAGAAAAACTCGAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568404.1
CDS TCA 72 bp TCATTCAAGGCATTTAGTTTGGCCAATATCTTCTGTTaGAGACTTGGTTCTTCAGTGACAGTTTCACAACTC +
Preference number: 6 (lower is better)
Translates to: SFKAFSLANIFC*RLGSSVTVSQL
Trigger: GAGTTGTGAAACTGTCACTGAAGAACCAAGTCTTCAACAGAAGATATTGGCCAAACTAAATGCCTTGAATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS GCA 72 bp TTGCATTTGTTTGAAGTTGGAATGTCCTTGTCGTTCTaGAATCATGTCAGAAGTAAGTCTACCACCAAACAA +
Preference number: 6 (lower is better)
Translates to: LHLFEVGMSLSF*NHVRSKSTTKQ
Trigger: TTGTTTGGTGGTAGACTTACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CCA 72 bp TGGTTCAATTGGTATCCCATCCAAAGCTTTCAGTTCTaGAAGATGAAATATTACAAACAACCGGTAGTTTTC +
Preference number: 6 (lower is better)
Translates to: WFNWYPIQSFQF*KMKYYKQPVVF
Trigger: GAAAACTACCGGTTGTTTGTAATATTTCATCTTCCAGAACTGAAAGCTTTGGATGGGATACCAATTGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CCA 72 bp AACATCTGTAAGTTAGGCAGTCGAAATATAAGCATGTaGCGATGTAGCATTTTTCTACAAATTGGATTGCCA +
Preference number: 6 (lower is better)
Translates to: NICKLGSRNISM*RCSIFLQIGLP
Trigger: TGGCAATCCAATTTGTAGAAAAATGCTACATCGCCACATGCTTATATTTCGACTGCCTAACTTACAGATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445360.5
ENST00000568404.1
ENST00000647410.1
CDS CAA 90 bp CTAATAGATGATGAAGTCCAATTTAGTTCTTGCATTTGTTTGAAGTaGGAATGTCCTTGTCGTTCTGCAATCATGTCAGAAGTAAGTCTA +
Preference number: 6 (lower is better)
Translates to: LIDDEVQFSSCICLK*ECPCRSAIMSEVSL
Trigger: TAGACTTACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1
CDS CAA 90 bp ATACAGCTAATAGATGATGAAGTCCAATTTAGTTCTTGCATTTGTTaGAAGTTGGAATGTCCTTGTCGTTCTGCAATCATGTCAGAAGTA +
Preference number: 6 (lower is better)
Translates to: IQLIDDEVQFSSCIC*KLECPCRSAIMSEV
Trigger: TACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGCTGTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254271.8
CDS CAA 90 bp ACTGTTCTAATAGATGATGAAGTCCAATTTAGTTCTTGCATTTGTTaGAAGTTGGAATGTCCTTGTCGTTCTGCAATCATGTCAGAAGTA +
Preference number: 6 (lower is better)
Translates to: TVLIDDEVQFSSCIC*KLECPCRSAIMSEV
Trigger: TACTTCTGACATGATTGCAGAACGACAAGGACATTCCAACTTCAAACAAATGCAAGAACTAAATTGGACTTCATCATCTATTAGAACAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445360.5
ENST00000647410.1
CDS TCA 72 bp GTATGCTCATTTCTCTTTAGGCAGTTACATTCGATTTaGTCTTGGAAAGTTGCTCCCAAAAATTCTTCAACT +
Preference number: 6 (lower is better)
Translates to: VCSFLFRQLHSI*SWKVAPKNSST
Trigger: AGTTGAAGAATTTTTGGGAGCAACTTTCCAAGATCAAATCGAATGTAACTGCCTAAAGAGAAATGAGCATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445360.5
CDS CCA 72 bp GGTTACCAGAAAGGTTTAATCTTTCCAGTTGTTCATTaGAGTCAAGACATCGACCAATGCTATTTATTAGAT +
Preference number: 6 (lower is better)
Translates to: GYQKGLIFPVVH*SQDIDQCYLLD
Trigger: ATCTAATAAATAGCATTGGTCGATGTCTTGACTCCAATGAACAACTGGAAAGATTAAACCTTTCTGGTAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CCA 72 bp CATGTGTGGAATAATTACACAGAAGACAAACTGGATTaGTTGTATATTGAGGGTCATTCAGACATAAATCCT +
Preference number: 6 (lower is better)
Translates to: HVWNNYTEDKLD*LYIEGHSDINP
Trigger: AGGATTTATGTCTGAATGACCCTCAATATACAACCAATCCAGTTTGTCTTCTGTGTAATTATTCCACACATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000454474.2
ENST00000647410.1
CDS CAA 72 bp TTAAAGCTAATGTTTAGTTTTCGAAGTCCTGTTAACTaGGAGAGATCTCTCAATTTACTCAAGCTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: LKLMFSFRSPVN*ERSLNLLKLFP
Trigger: TGGAAACAGCTTGAGTAAATTGAGAGATCTCTCCAAGTTAACAGGACTTCGAAAACTAAACATTAGCTTTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254271.8
ENST00000445360.5
ENST00000647410.1