RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC8E (Homo sapiens)

Ensembl gene IDs: ENSG00000171017

Ensembl transcript IDs: ENST00000306708.11, ENST00000593511.1, ENST00000598224.5, ENST00000599367.1, ENST00000600345.1, ENST00000618098.4

Found 377 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTaGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATAC +
Preference number: 1 (lower is better)
Translates to: LGMGARPASLPETQV*FWSENAMTELIPPY
Trigger: GTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 90 bp ATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTaGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTT +
Preference number: 1 (lower is better)
Translates to: MGARPASLPETQVWF*SENAMTELIPPYQV
Trigger: AACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR TCA 90 bp CCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTaGGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACAACAT +
Preference number: 1 (lower is better)
Translates to: PARDTGVVLVGECHD*VNPSIPGSTPAPQH
Trigger: ATGTTGTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR GCA 90 bp TGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTaGATGGGGAGGGGGAGTGTTGGAAATCCCACTGGGATGTGTCGT +
Preference number: 1 (lower is better)
Translates to: CVLSLGENSRSKLLC*MGRGSVGNPTGMCR
Trigger: ACGACACATCCCAGTGGGATTTCCAACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 90 bp TTAAGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTaGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTCC +
Preference number: 1 (lower is better)
Translates to: LSTQRTVKTKVPACP*KNVTSIAGVLTLQS
Trigger: GGACTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGTGGGCCCCAGAAAGATaGCACAGCTGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: PYVALIELEYPGRGSSSRWAPER*HSCPRP
Trigger: GGGGCGGGGGCAGCTGTGTCATCTTTCTGGGGCCCA...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTGGGCCCCAGAAAGATaGCACAGCTGCCCCCGCCCC +
Preference number: 2 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYWAPER*HSCPRP
Trigger: GGGGCGGGGGCAGCTGTGTCATCTTTCTGGGGCCCA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACTGGCCTGGACCCACTTaGCTTCCTATCTTGGAAGAC +
Preference number: 2 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHWPGPT*LPILED
Trigger: GTCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCA...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 90 bp AACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTaGCTTTGTTGCATGGGGAGGGGGAGTGTTGGAAATCCCACTGGG +
Preference number: 2 (lower is better)
Translates to: NCVCVLSLGENSRSK*LCCMGRGSVGNPTG
Trigger: CCCAGTGGGATTTCCAACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGGGGAGGGGGAGTGTTaGAAATCCCACTGGGATGTG +
Preference number: 2 (lower is better)
Translates to: STQRTVKTKVPACPWKNVGEGEC*KSHWDV
Trigger: CACATCCCAGTGGGATTTCCAACACTCCCCCTCCCC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTTCTGTGTCCTCTCCTTaGGAGAGAACTCCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCSVSSP*ERTPEV
Trigger: TACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGA...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 90 bp ATAGCAGGTGTCCTAACCCTGCAGTCCACCCACCTTAGGAAGTCCTaGAATAGCTCTCTGGGGGAAATCTATCAGCTGCCTGAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: IAGVLTLQSTHLRKS*NSSLGEIYQLPEEL
Trigger: AAGCTCTTCAGGCAGCTGATAGATTTCCCCCAGAGAGCTATTCAAGGACTTCCTAAGGTGGGTGGACTGCAGGGTTAGGACACCTGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTGATCTCGAACTCCTaGGCTCAACCATCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPLISNS*AQPSSC
Trigger: GCAGGAGGATGGTTGAGCTCAGGAGTTCGAGATCAG...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCTTGGCTTCCTATCTTaGAAGACAATGGTTGAGATT +
Preference number: 2 (lower is better)
Translates to: SWNIQGEAAVLGMGARPALGFLS*KTMVEI
Trigger: AATCTCAACCATTGTCTTCCAAGATAGGAAGCCAAG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGTGTTGGAAATCCCACTaGGATGTGTCGTTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVCWKSH*DVSFPP
Trigger: TGGGGGAAACGACACATCCCAGTGGGATTTCCAACA...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR GCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTCAGGGCCACTTACCTaGACCAGAACTACCTGGAAT +
Preference number: 2 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQSGPLT*TRTTWN
Trigger: ATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGA...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR GCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGCTCAACCATCCTCCTaGATTGGCCTCTCAAACAGC +
Preference number: 2 (lower is better)
Translates to: STQRTVKTKVPACPWKNVAQPSS*IGLSNS
Trigger: GCTGTTTGAGAGGCCAATGCAGGAGGATGGTTGAGC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCCAGAGACACAGGTGTaGTTTTGGTCGGAGAATGCC +
Preference number: 2 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPPETQV*FWSENA
Trigger: GGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTTGGAAGACAATGGTTaGGATTCCAGGGCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQLEDNG*DSRAEA
Trigger: TGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAA...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGGAGAATGCCATGACTaGGTTAATCCCTCCATACCA +
Preference number: 2 (lower is better)
Translates to: PYVALIELEYPGRGSSSRGECHD*VNPSIP
Trigger: TGGTATGGAGGGATTAACTCAGTCATGGCATTCTCC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTACACAGGTGTGGTTTTaGTCGGAGAATGCCATGACT +
Preference number: 2 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVTQVWF*SENAMT
Trigger: AGTCATGGCATTCTCCGACCAAAACCACACCTGTGT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCATCTGTGTCCTCTCCTTaGGAGAGAACTCCAGAAGTA +
Preference number: 2 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESSVSSP*ERTPEV
Trigger: TACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGA...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 90 bp ATTAAGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTaGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: IKHPENSQDQSPCLS*EKCHLYSRCPNPAV
Trigger: GACTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTATATGTGGCACTAATTaGGCTGGAATATCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVICGTN*AGISRE
Trigger: CTCCCTGGATATTCCAGCTCAATTAGTGCCACATAT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGATATGTGGCACTAATTaGGCTGGAATATCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQICGTN*AGISRE
Trigger: CTCCCTGGATATTCCAGCTCAATTAGTGCCACATAT...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTGGCCTGGACCCACTTaGCTTCCTATCTTGGAAGAC +
Preference number: 2 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYWPGPT*LPILED
Trigger: GTCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTTGTTGGAAATCCCACTaGGATGTGTCGTTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFCWKSH*DVSFPP
Trigger: TGGGGGAAACGACACATCCCAGTGGGATTTCCAACA...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 90 bp GAGCTAACATATAACACAGCAAACAACTGTGTCTGTGTCCTCTCCTaGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ELTYNTANNCVCVLS*GENSRSKLLCCMGR
Trigger: CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGTTTGCTGTGTTATATGTTAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCCTTGGCTTCCTATCTTaGAAGACAATGGTTGAGATT +
Preference number: 2 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGILGFLS*KTMVEI
Trigger: AATCTCAACCATTGTCTTCCAAGATAGGAAGCCAAG...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGGAGAATGCCATGACTaGGTTAATCCCTCCATACCA +
Preference number: 2 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYGECHD*VNPSIP
Trigger: TGGTATGGAGGGATTAACTCAGTCATGGCATTCTCC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp AGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTaGTCGGAGAATGCCATGACTGAGTTAATCCCTCCA +
Preference number: 3 (lower is better)
Translates to: RPASLPETQVWF*SENAMTELIPP
Trigger: TGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp GGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTaGTTTTGGTCGGAGAATGCCATGACTGAGTTAATC +
Preference number: 3 (lower is better)
Translates to: GARPASLPETQV*FWSENAMTELI
Trigger: GATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACCTGGCCTGGACCCACTaGGCTTCCTATCTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHLAWTH*ASYLGR
Trigger: TCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCAG...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTGTCTGTGTCCTCTCCTaGGGAGAGAACTCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCVCVLS*GENSRS
Trigger: ACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGAC...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR TCA 72 bp GACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTaGGTTAATCCCTCCATACCAGGTTCCACCCCAGCT +
Preference number: 3 (lower is better)
Translates to: DTGVVLVGECHD*VNPSIPGSTPA
Trigger: AGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR GCA 72 bp TCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTaGATGGGGAGGGGGAGTGTTGGAAATCCCACTGGG +
Preference number: 3 (lower is better)
Translates to: SLGENSRSKLLC*MGRGSVGNPTG
Trigger: CCCAGTGGGATTTCCAACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGACACAGGTGTGGTTTaGGTCGGAGAATGCCATGAC +
Preference number: 3 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRDTGVV*VGECHD
Trigger: GTCATGGCATTCTCCGACCAAAACCACACCTGTGTC...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACTGGCCTGGACCCACTaGGCTTCCTATCTTGGAAGA +
Preference number: 3 (lower is better)
Translates to: WFWSENAMTELIPPYQVPLAWTH*ASYLGR
Trigger: TCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCAG...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCGGGGACTGGGATATTTaGTTTTGCACCGACTCCCTA +
Preference number: 3 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSGDWDI*FCTDSL
Trigger: TAGGGAGTCGGTGCAAAACAAAATATCCCAGTCCCC...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp CACCAGAACTACCTGGAATATTTAGGAACAGACTCCTaGCCCCCAACCAAACCTCCTGAGTCAGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: HQNYLEYLGTDS*PPTKPPESVFQ
Trigger: CTGAAACACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAAACTCCAGAAGTAAGTaGCTTTGTTGCATGGGGAGG +
Preference number: 3 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESNSRSK*LCCMGR
Trigger: CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTT...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp TTTGTACACCAGCATTTTCCTGAGGAAGGAGGTGCCTaGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCA +
Preference number: 3 (lower is better)
Translates to: FVHQHFPEEGGA*LHQFLKGSRTS
Trigger: TGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCCTTCCTCAGGAAAATGCTGGTGTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR-3UTR CAA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGGAGCTTTGTGTGTATTaGTACACCAGCATTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQELCVY*YTSIFL
Trigger: CAGGAAAATGCTGGTGTACAAATACACACAAAGCTC...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp CAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTaGAAAAATGTCACCTCTATAGCAGGTGTCCTAACC +
Preference number: 3 (lower is better)
Translates to: QRTVKTKVPACP*KNVTSIAGVLT
Trigger: GGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CCA 72 bp ATAACACAGCAAACAACTGTGTCTGTGTCCTCTCCTTaGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCA +
Preference number: 3 (lower is better)
Translates to: ITQQTTVSVSSP*ERTPEVSCFVA
Trigger: TGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGTTTGCTGTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGACCCCGGCCCGGTCCCTaGCATGGCCACTATGGTGGC +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGPRPGP*HGHYGG
Trigger: GCCACCATAGTGGCCATGGCAGGGACCGGGCCGGGG...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGGTAGCCCGTGACCTCTaGCGTCTCCACCCTACAGGC +
Preference number: 4 (lower is better)
Translates to: AVLGMGARPASLPETQVWVARDL*RLHPTG
Trigger: GCCTGTAGGGTGGAGACGTCAGAGGTCACGGGCTAC...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCTGGGCCCCAGAAAGATaGCACAGCTGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPAWAPER*HSCPRP
Trigger: GGGGCGGGGGCAGCTGTGTCATCTTTCTGGGGCCCA...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCTGAGGGCACCCACGTaGGGCGAGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPALRAPT*GESWLS
Trigger: GCTGAGCCAGCTCTCGCCCCACGTGGGTGCCCTCAG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCGGAGGCTCTCCAGGGTaGCTGCCCGAGCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPAGGSPG*LPELAP
Trigger: AGGAGCTAGCTCGGGCAGCCACCCTGGAGAGCCTCC...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGACCCGCGGCATTGCGCTaGAGCTTCTGTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGPAALR*SFCRSF
Trigger: GAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGG...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGGAGAAGGGTAGCCTaGCGGGCGAGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPARRRVA*RASGAS
Trigger: GCTTGCTCCACTCGCCCGCCAGGCTACCCTTCTCCT...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGACGCATCACCTTCAGGTaGTCCCGCAGGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGRITFR*SRRKTC
Trigger: GCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCG...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCGGAGGGACAACACCTTaGGCTGCTTCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPAGGTTP*AASAPG
Trigger: TCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCC...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAATGCCGCCAGCTTCTTaGGGCTGTTCAGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGMPPAS*GCSGQP
Trigger: TGGTTGCCCTGAACAGCCTCAAGAAGCTGGCGGCAT...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTGCCGGCCCGCGGCATTaGGCTGCAGCTTCTGTCGAA +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCAGPRH*AAASVE
Trigger: TTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGC...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACGCCCGGTCCCTGCCATaGCCACTATGGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHARSLP*PLWWPQ
Trigger: CTGCGGCCACCATAGTGGCCATGGCAGGGACCGGGC...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGCAACAGGGTGACAACTaGAGGCTCGGTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: AVLGMGARPASLPETQVWQQGDN*RLGHHL
Trigger: AAGGTGGTGACCGAGCCTCCAGTTGTCACCCTGTTG...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGATCTTGTCCAACAGGGTaGCAACTGGAGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGSCPTG*QLEARS
Trigger: TGACCGAGCCTCCAGTTGTCACCCTGTTGGACAAGA...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACAGCTGGCGTAGCCCGTaGCCTCTGACGTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHSWRSP*PLTSPP
Trigger: GGGTGGAGACGTCAGAGGTCACGGGCTACGCCAGCT...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAGTGTCACCTGGAGGGTaGAGCCAAAGACCCCAATCA +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGVSPGG*SQRPQS
Trigger: TGATTGGGGTCTTTGGCTGCACCCTCCAGGTGACAC...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTAGCCCGTTCGGTGGCTaGTGGGCCCTTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCSPFGG*WALLVL
Trigger: GAGAACCAGAAGGGCCCAGCAGCCACCGAACGGGCT...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGCCCCGGCCCGGTCCCTaGCATGGCCACTATGGTGGC +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRPRPGP*HGHYGG
Trigger: GCCACCATAGTGGCCATGGCAGGGACCGGGCCGGGG...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTGCACCTTCCCGGCGTTaGTCCGGAGGGACAACACCT +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCAPSRR*SGGTTP
Trigger: AGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGC...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCTTGTCCCGCACTTCTaGCGGCAGACCCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPALVPHF*RQTLVK
Trigger: CTTTACCAGGGTCTGCCGGCAGAAGTGCGGGACAAG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACCCGTTCGGTGGCTGCTaGGCCCTTCTGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHPFGGC*ALLVLP
Trigger: GGGGAGAACCAGAAGGGCCCAGCAGCCACCGAACGG...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGCCGCAGCCCGTTCGGTaGCTGCTGGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRPQPVR*LLGPSG
Trigger: ACCAGAAGGGCCCAGCAGCCACCGAACGGGCTGCGG...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTAGGAGAAGGGTAGCCTaGCGGGCGAGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCRRRVA*RASGAS
Trigger: GCTTGCTCCACTCGCCCGCCAGGCTACCCTTCTCCT...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACGGAGGCTCTCCAGGGTaGCTGCCCGAGCTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHGGSPG*LPELAP
Trigger: AGGAGCTAGCTCGGGCAGCCACCCTGGAGAGCCTCC...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTCAACGTCGGTCACACTaGCTGGCACCTTCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCQRRSH*LAPSRR
Trigger: ACGCCGGGAAGGTGCCAGCCAGTGTGACCGACGTTG...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAAGCTTCCGGCAGTGCTaGAAGCTGAGGATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGSFRQC*KLRISS
Trigger: CGAGGAAATCCTCAGCTTCCAGCACTGCCGGAAGCT...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACGGCCTCCAGCCTGAGTaGCTCCACCTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHGLQPE*LHLTEL
Trigger: GAGCTCAGTGAGGTGGAGTCACTCAGGCTGGAGGCC...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCACAGCAGACGGAGGCCTaGGCACAGGCCGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESQQTEA*AQAELG
Trigger: TCCCAGCTCGGCCTGTGCTCAGGCCTCCGTCTGCTG...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGCTCTGGGAGCGGAGCTaGCGCGACTCCCGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVLWERS*RDSRRV
Trigger: AACTCTGCGGGAGTCGCGGCAGCTCCGCTCCCAGAG...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCTGCTGTTCCGTGAACTaGTTGAACTCGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: SWNIQGEAAVLGMGARPACCSVN*LNSATG
Trigger: CCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCA...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAACCTTGAACGCAGGCTaGTGTTCCGTGAACTGCTTG +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGTLNAG*CSVNCL
Trigger: CAAGCAGTTCACGGAACAGCAGCCTGCGTTCAAGGT...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACCCCCGAGGCAGCAATTaGTGGCACGGGGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHPRGSN*WHGASD
Trigger: ATCAGAGGCCCCGTGCCAGCAATTGCTGCCTCGGGG...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGTGCAGGGCCCCAATCTaGTCAGGGATCCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRCRAPI*SGIPRG
Trigger: GCCTCGGGGGATCCCTGAGCAGATTGGGGCCCTGCA...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGCAGACCCGGCAGCATaGAGAGGGCCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESADPAA*RGPAPA
Trigger: GGCTGGAGCTGGCCCTCTGCATGCTGCCGGGTCTGC...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGCTGCCATGGCCACTATaGTGGCCGCAGCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVLPWPL*WPQPVR
Trigger: CCGAACGGGCTGCGGCCACCATAGTGGCCATGGCAG...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGATGGCCTGGACCCACTTaGCTTCCTATCTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: DGSKASQPARDTGVVLVGWPGPT*LPILED
Trigger: GTCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCA...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTCTCCTGGAGCTCATaGTTGGGTAGACAGATGATC +
Preference number: 4 (lower is better)
Translates to: AVLGMGARPASLPETQVWFSWSS*LGRQMI
Trigger: GATCATCTGTCTACCCAATCATGAGCTCCAGGAGAA...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTGTGACTCCACCTCACTaGGCTCAAAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCVTPPH*AQRRCR
Trigger: CCGACACCGTCTTTGAGCTCAGTGAGGTGGAGTCAC...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGCTGCTCCAGGCTCCTaGGCTTCCGCACGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRAAPGS*ASARAQ
Trigger: CTGAGCACGTGCGGAAGCTCAGGAGCCTGGAGCAGC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCGCTGCTCCAGGCTCCTaGGCTTCCGCACGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSAAPGS*ASARAQ
Trigger: CTGAGCACGTGCGGAAGCTCAGGAGCCTGGAGCAGC...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGCTCTGGGAGCGGAGCTaGCGCGACTCCCGCAGAGTT +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQLWERS*RDSRRV
Trigger: AACTCTGCGGGAGTCGCGGCAGCTCCGCTCCCAGAG...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGCCGGCCCGCGGCATTaGGCTGCAGCTTCTGTCGAA +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESAGPRH*AAASVE
Trigger: TTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGC...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGAGTAAGTTGCTTTGTTaGATGGGGAGGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: AVLGMGARPASLPETQVWSKLLC*MGRGSV
Trigger: AACACTCCCCCTCCCCATGCAACAAAGCAACTTACT...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGACTCCAGAAGTAAGTTaGTTTGTTGCATGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AVLGMGARPASLPETQVWTPEVS*FVAWGG
Trigger: CCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGT...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGGCTGGGCCCAACTCCTaGGTCTCTGGGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQAGPNS*VSGSGA
Trigger: AGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGC...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTTCCGGGAGGGACGCTaGGCCCAACTCCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQFREGR*AQLLGL
Trigger: GAGACCCAGGAGTTGGGCCCAGCGTCCCTCCCGGAA...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTGCTGCTGGGCCCTTCTaGTTCTCCCCGGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPAAGPF*FSPETS
Trigger: CGAGGTCTCCGGGGAGAACCAGAAGGGCCCAGCAGC...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCCCGTTCGGTGGCTGCTaGGCCCTTCTGGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSPFGGC*ALLVLP
Trigger: GGGGAGAACCAGAAGGGCCCAGCAGCCACCGAACGG...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCGCAGCCCGTTCGGTaGCTGCTGGGCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPPQPVR*LLGPSG
Trigger: ACCAGAAGGGCCCAGCAGCCACCGAACGGGCTGCGG...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCTGCCATGGCCACTATaGTGGCCGCAGCCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPLPWPL*WPQPVR
Trigger: CCGAACGGGCTGCGGCCACCATAGTGGCCATGGCAG...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGGTCGGTCACACTGGCTaGCACCTTCCCGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVVGHTG*HLPGVA
Trigger: AGCAACGCCGGGAAGGTGCCAGCCAGTGTGACCGAC...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTACGTGGGGCGAGAGCTaGCTCAGCTGGTTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVTWGES*LSWLSP
Trigger: GGGCGACAACCAGCTGAGCCAGCTCTCGCCCCACGT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGGAAGGAGTACTCCTTaGGGGGCCGGTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESGRSTP*GAGGRA
Trigger: GGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCC...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGCAGCGCACCCAGGCTaGACACTGCATGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPAAHPG*TLHGGC
Trigger: GCATCCCCCATGCAGTGTTCAGCCTGGGTGCGCTGC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTTGGGCCCCAGAAAGATaGCACAGCTGCCCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFWAPER*HSCPRP
Trigger: GGGGCGGGGGCAGCTGTGTCATCTTTCTGGGGCCCA...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTCTGATCTCGAACTCCTaGGCTCAACCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCLISNS*AQPSSC
Trigger: GCAGGAGGATGGTTGAGCTCAGGAGTTCGAGATCAG...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTGTGTCACCTGGAGGGTaGAGCCAAAGACCCCAATCA +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCVSPGG*SQRPQS
Trigger: TGATTGGGGTCTTTGGCTGCACCCTCCAGGTGACAC...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCGGGCCTTGGTGTGGTTaGAGCAGAAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIGPWCG*SRSWRS
Trigger: GCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCC...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACACTGCATGGGGGATaGGCTCCAGCCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVTLHGG*APARRP
Trigger: TGGCCTGCGGGCTGGAGCGCATCCCCCATGCAGTGT...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAACACTGCATGGGGGATaGGCTCCAGCCCGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPTLHGG*APARRP
Trigger: TGGCCTGCGGGCTGGAGCGCATCCCCCATGCAGTGT...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCAGGTGCTGTAGGTTCTaGAGGAGGCCCACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIRCCRF*RRPTSG
Trigger: ACCCGAGGTGGGCCTCCTGCAGAACCTACAGCACCT...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCCAACTCCTGGGTCTCTaGGAGCGGAGCTGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVQLLGL*ERSCRD
Trigger: GTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTG...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCCATGGCCACTATGGTaGCCGCAGCCCGTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPPWPLW*PQPVRW
Trigger: CCACCGAACGGGCTGCGGCCACCATAGTGGCCATGG...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGCCCGGTCCCTGCCATaGCCACTATGGTGGCCGCAG +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFARSLP*PLWWPQ
Trigger: CTGCGGCCACCATAGTGGCCATGGCAGGGACCGGGC...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTAACAGAAGGCCAGCTTaGAGAAGAGGTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCNRRPA*RRGGPW
Trigger: CCAAGGCCCACCTCTTCTCCAAGCTGGCCTTCTGTT...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGTCGGTCACACTGGCTaGCACCTTCCCGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRVGHTG*HLPGVA
Trigger: AGCAACGCCGGGAAGGTGCCAGCCAGTGTGACCGAC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGCAACGTCGGTCACACTaGCTGGCACCTTCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRQRRSH*LAPSRR
Trigger: ACGCCGGGAAGGTGCCAGCCAGTGTGACCGACGTTG...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGAGGCTGAACACTGCATaGGGGATGCGCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQRLNTA*GMRSSP
Trigger: CGGGCTGGAGCGCATCCCCCATGCAGTGTTCAGCCT...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGTAGCCCGTGACCTCTaGCGTCTCCACCCTACAGGC +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPVARDL*RLHPTG
Trigger: GCCTGTAGGGTGGAGACGTCAGAGGTCACGGGCTAC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTAGCTGGCGTAGCCCGTaGCCTCTGACGTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFSWRSP*PLTSPP
Trigger: GGGTGGAGACGTCAGAGGTCACGGGCTACGCCAGCT...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTAGGCGAAGTCATTCTTaGCGTCAGGAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCRRSHS*RQECPP
Trigger: TGGGGGACATTCCTGACGTCAAGAATGACTTCGCCT...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAGGCCTCCAGCCTGAGTaGCTCCACCTCACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPGLQPE*LHLTEL
Trigger: GAGCTCAGTGAGGTGGAGTCACTCAGGCTGGAGGCC...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTGCGAGTGGAGCAAGCTaGGCTCCTGCAAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPASGAS*APASAP
Trigger: TGGTGCACTTGCAGGAGCTCAGCTTGCTCCACTCGC...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCGGAGCTCCTCGCATTTaGCGCGCATCACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIGAPRI*RASPSG
Trigger: ACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCC...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGGAGGGACAACACCTTaGGCTGCTTCAGCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRGGTTP*AASAPG
Trigger: TCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGCAGGTGGTTGTCCTTaGGGTCAAGTTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRAGGCP*GQVPAA
Trigger: CGCTGCAGGAACTTGACCTCAAGGACAACCACCTGC...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATCAGCAGACGGAGGCCTaGGCACAGGCCGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYQQTEA*AQAELG
Trigger: TCCCAGCTCGGCCTGTGCTCAGGCCTCCGTCTGCTG...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTCCCGCGGCATTGCGCTaGAGCTTCTGTCGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVPAALR*SFCRSF
Trigger: GAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGG...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCACTGAGCTCCTGCAAGTaGACCAGCTGTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESLSSCK*TSCDSP
Trigger: GGGGCTGTCACAGCTGGTGCACTTGCAGGAGCTCAG...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCTGAGCTCCTGCAAGTaGACCAGCTGTGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPLSSCK*TSCDSP
Trigger: GGGGCTGTCACAGCTGGTGCACTTGCAGGAGCTCAG...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGCACCTTCCCGGCGTTaGTCCGGAGGGACAACACCT +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVAPSRR*SGGTTP
Trigger: AGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTAGGTGCTGTAGGTTCTaGAGGAGGCCCACCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPRCCRF*RRPTSG
Trigger: ACCCGAGGTGGGCCTCCTGCAGAACCTACAGCACCT...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTCAACTCCTGGGTCTCTaGGAGCGGAGCTGCCGCGAC +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFQLLGL*ERSCRD
Trigger: GTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTG...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGCTTGAACTCGGCCACTaGGATCATGCTGCCGTTCCG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVLELGH*DHAAVP
Trigger: CGGAACGGCAGCATGATCCCAGTGGCCGAGTTCAAG...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306708.11
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCCGAGGCAGCAATTGCTaGCACGGGGCCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIRGSNC*HGASDK
Trigger: CTTATCAGAGGCCCCGTGCCAGCAATTGCTGCCTCG...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGCGAGGCAGCAATTGCTaGCACGGGGCCTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVRGSNC*HGASDK
Trigger: CTTATCAGAGGCCCCGTGCCAGCAATTGCTGCCTCG...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAAGGCTGAACACTGCATaGGGGATGCGCTCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPRLNTA*GMRSSP
Trigger: CGGGCTGGAGCGCATCCCCCATGCAGTGTTCAGCCT...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACGAGTGTAGCCCATTGTaGGACACATCCAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHECSPL*DTSSRR
Trigger: CCGTCTGCTGGATGTGTCCCACAATGGGCTACACTC...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATCTGAGGGCACCCACGTaGGGCGAGAGCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYLRAPT*GESWLS
Trigger: GCTGAGCCAGCTCTCGCCCCACGTGGGTGCCCTCAG...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTCCAGAGACACAGGTGTaGTTTTGGTCGGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCPETQV*FWSENA
Trigger: GGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCGGGGAGGGGGAGTGTTaGAAATCCCACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIGEGEC*KSHWDV
Trigger: CACATCCCAGTGGGATTTCCAACACTCCCCCTCCCC...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGTTAGACGGCTTTCGCTaGCCTCGGACAGGAAGACGG +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRLDGFR*PRTGRR
Trigger: CCGTCTTCCTGTCCGAGGTCAGCGAAAGCCGTCTAA...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGGTGACTCCACCTCACTaGGCTCAAAGACGGTGTCGG +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQVTPPH*AQRRCR
Trigger: CCGACACCGTCTTTGAGCTCAGTGAGGTGGAGTCAC...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGCGAGTGGAGCAAGCTaGGCTCCTGCAAGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPASGAS*APASAP
Trigger: TGGTGCACTTGCAGGAGCTCAGCTTGCTCCACTCGC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCGGAGCTCCTCGCATTTaGCGCGCATCACCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSGAPRI*RASPSG
Trigger: ACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCC...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGTGCTGTTCCGTGAACTaGTTGAACTCGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVCCSVN*LNSATG
Trigger: CCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCA...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTTGCAGGGCCCCAATCTaGTCAGGGATCCCCCGAGGC +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPCRAPI*SGIPRG
Trigger: GCCTCGGGGGATCCCTGAGCAGATTGGGGCCCTGCA...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGGCAGACCCGGCAGCATaGAGAGGGCCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTADPAA*RGPAPA
Trigger: GGCTGGAGCTGGCCCTCTGCATGCTGCCGGGTCTGC...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTGACAACACCTTGAGCTaGTTCAGCTCCCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVDNTLS*FSSRRL
Trigger: GAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTC...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCGACAACACCTTGAGCTaGTTCAGCTCCCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSDNTLS*FSSRRL
Trigger: GAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTC...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCCTTGTCCCGCACTTCTaGCGGCAGACCCTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSLVPHF*RQTLVK
Trigger: CTTTACCAGGGTCTGCCGGCAGAAGTGCGGGACAAG...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACAAGGCCAGCCAGCCTaGCAGAGACACAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPQGQPA*QRHRCG
Trigger: ACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTG...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCAAGGCCAGCCAGCCTaGCAGAGACACAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPQGQPA*QRHRCG
Trigger: ACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTG...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGGCCCTGGTGGTCCATaGAGAGTCGAAACACTTGCC +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRGPGGP*RVETLA
Trigger: GGCAAGTGTTTCGACTCTCCATGGACCACCAGGGCC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGGGCCCTGGTGGTCCATaGAGAGTCGAAACACTTGCC +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQGPGGP*RVETLA
Trigger: GGCAAGTGTTTCGACTCTCCATGGACCACCAGGGCC...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTCCATGGCCACTATGGTaGCCGCAGCCCGTTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPPWPLW*PQPVRW
Trigger: CCACCGAACGGGCTGCGGCCACCATAGTGGCCATGG...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCCGCATCACCTTCAGGTaGTCCCGCAGGAAGACCTGC +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVRITFR*SRRKTC
Trigger: GCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCG...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGAGCTTCCGGCAGTGCTaGAAGCTGAGGATTTCCTCG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVSFRQC*KLRISS
Trigger: CGAGGAAATCCTCAGCTTCCAGCACTGCCGGAAGCT...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTTGTTGGAAATCCCACTaGGATGTGTCGTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCCWKSH*DVSFPP
Trigger: TGGGGGAAACGACACATCCCAGTGGGATTTCCAACA...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTGGAAGGAGTACTCCTTaGGGGGCCGGTGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPGRSTP*GAGGRA
Trigger: GGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCC...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCATTAGACGGCTTTCGCTaGCCTCGGACAGGAAGACGG +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPLDGFR*PRTGRR
Trigger: CCGTCTTCCTGTCCGAGGTCAGCGAAAGCCGTCTAA...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGCGCACCCAGGCTaGACACTGCATGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIAAHPG*TLHGGC
Trigger: GCATCCCCCATGCAGTGTTCAGCCTGGGTGCGCTGC...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGCTGATCTCGAACTCCTaGGCTCAACCATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRLISNS*AQPSSC
Trigger: GCAGGAGGATGGTTGAGCTCAGGAGTTCGAGATCAG...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCACACCAGCATTTTCCTaGGGAAGGAGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSTPAFS*GRRCLA
Trigger: AGCCAGGCACCTCCTTCCTCAGGAAAATGCTGGTGT...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTCCCCGAGGCAGCAATTaGTGGCACGGGGCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPPRGSN*WHGASD
Trigger: ATCAGAGGCCCCGTGCCAGCAATTGCTGCCTCGGGG...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTAGGCCTTTAACCTCCTaGAGGGCCCCAATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVRPLTS*RAPICS
Trigger: TGAGCAGATTGGGGCCCTGCAGGAGGTTAAAGGCCT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTCAGGAATGTCCCCCATaGCAGTCTCCTCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPQECPP*QSPPAR
Trigger: CCGTGCGGGAGGAGACTGGCATGGGGGACATTCCTG...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCATCCCGCAGGAAGACCTaGAAGGAGAAGGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPSRRKT*KEKGSL
Trigger: CAGGCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGA...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTGCAACGTCCGCAGCTTaGGGCAGAAGAAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVATSAA*GRRRAL
Trigger: AAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGC...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCTGGGCCCAACTCCTaGGTCTCTGGGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIAGPNS*VSGSGA
Trigger: AGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGC...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTTTGTCCTGTGTCACCTaGAGGGTGCAGCCAAAGACC +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPLSCVT*RVQPKT
Trigger: GGTCTTTGGCTGCACCCTCCAGGTGACACAGGACAA...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCTGCTGGGCCCTTCTaGTTCTCCCCGGAGACCTCG +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIAAGPF*FSPETS
Trigger: CGAGGTCTCCGGGGAGAACCAGAAGGGCCCAGCAGC...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTAGAAGAGGTGGGCCTTaGTGTGGTTGCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVRRGGP*CGCSRS
Trigger: GCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTGAGTGTAGCCCATTGTaGGACACATCCAGCAGACGG +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPECSPL*DTSSRR
Trigger: CCGTCTGCTGGATGTGTCCCACAATGGGCTACACTC...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGAGAGCTGGCTCAGCTaGTTGTCGCCCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVESWLS*LSPRSN
Trigger: GTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCTC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGACGTGGGGCGAGAGCTaGCTCAGCTGGTTGTCGCCC +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTTWGES*LSWLSP
Trigger: GGGCGACAACCAGCTGAGCCAGCTCTCGCCCCACGT...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCTGGCCTGGACCCACTTaGCTTCCTATCTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIWPGPT*LPILED
Trigger: GTCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCA...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCTTAGGAACAGACTCCTaGCCCCCAACCAAACCTCCT +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGILGTDS*PPTKPP
Trigger: AGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAA...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGTTAGGAACAGACTCCTaGCCCCCAACCAAACCTCCT +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVLGTDS*PPTKPP
Trigger: AGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAA...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTAGGCGAAGTCATTCTTaGCGTCAGGAATGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVRRSHS*RQECPP
Trigger: TGGGGGACATTCCTGACGTCAAGAATGACTTCGCCT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGCAGGTGGTTGTCCTTaGGGTCAAGTTCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFAGGCP*GQVPAA
Trigger: CGCTGCAGGAACTTGACCTCAAGGACAACCACCTGC...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAAGCCCGTTCGGTGGCTaGTGGGCCCTTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSISPFGG*WALLVL
Trigger: GAGAACCAGAAGGGCCCAGCAGCCACCGAACGGGCT...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGGGCCTTGGTGTGGTTaGAGCAGAAGCTGGCGTAGC +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYGPWCG*SRSWRS
Trigger: GCTACGCCAGCTTCTGCTGCAACCACACCAAGGCCC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGCAGGAATGTCCCCCATaGCAGTCTCCTCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTQECPP*QSPPAR
Trigger: CCGTGCGGGAGGAGACTGGCATGGGGGACATTCCTG...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACTGGTTGAGATTGAGCTaGTTTAGACGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHWLRLS*FRRLSL
Trigger: CAGCGAAAGCCGTCTAAAGCAGCTCAATCTCAACCA...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGCAACGTCCGCAGCTTaGGGCAGAAGAAGAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPATSAA*GRRRAL
Trigger: AAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGCTCAACCATCCTCCTaGATTGGCCTCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESAQPSS*IGLSNS
Trigger: GCTGTTTGAGAGGCCAATGCAGGAGGATGGTTGAGC...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGTCTGTCGGATGTACATaGTGTACAGGATGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRSVGCT*CTGCRP
Trigger: AGGGCGACATCCTGTACACCATGTACATCCGACAGA...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAAGCTTGGAGAAGAGGTaGGCCTTGGTGTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPSLEKR*ALVWLQ
Trigger: CTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCT...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCGATTGGGTAGACAGATaGTCTTGTCCTGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIDWVDR*SCPVSP
Trigger: AGGTGACACAGGACAAGATCATCTGTCTACCCAATC...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCTGCCCAGGATGGAGATaGAGTGTTCAATCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSCPGWR*SVQSWS
Trigger: GCTCCAAGATTGAACACTTCATCTCCATCCTGGGCA...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTGCCCAGGATGGAGATaGAGTGTTCAATCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQCPGWR*SVQSWS
Trigger: GCTCCAAGATTGAACACTTCATCTCCATCCTGGGCA...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCAGGCCACCAGGAAACTaGTCTTCTCCACATAGACCA +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSRPPGN*SSPHRP
Trigger: TGGTCTATGTGGAGAAGATCAGTTTCCTGGTGGCCT...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTCCCAACCAAACCTCCTaGGTCAGTGTTTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFPNQTS*VSVSGE
Trigger: CTCCCCTGAAACACTGACTCAGGAGGTTTGGTTGGG...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGACTCCAGAAGTAAGTTaGTTTGTTGCATGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVTPEVS*FVAWGG
Trigger: CCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGT...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTTCAGGGCCACTTACCTaGACCAGAACTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPSGPLT*TRTTWN
Trigger: ATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGA...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCGGTTGTAGACCAGGATaGCCAGGAACTTACACACTT +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIGCRPG*PGTYTL
Trigger: AAGTGTGTAAGTTCCTGGCCATCCTGGTCTACAACC...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCATCGATGGAGCGCAGGTaGTTGTCCTTGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPSMERR*LSLRSS
Trigger: ACTTGACCTCAAGGACAACCACCTGCGCTCCATCGA...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTGAGAGCTGGCTCAGCTaGTTGTCGCCCAGAAGCAAC +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPESWLS*LSPRSN
Trigger: GTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCTC...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTGGGGAGGGGGAGTGTTaGAAATCCCACTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPGEGEC*KSHWDV
Trigger: CACATCCCAGTGGGATTTCCAACACTCCCCCTCCCC...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCTCTGTGTCCTCTCCTTaGGAGAGAACTCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGISVSSP*ERTPEV
Trigger: TACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGA...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACTTGAACTCGGCCACTaGGATCATGCTGCCATGCAA +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPLELGH*DHAAMQ
Trigger: TTGCATGGCAGCATGATCCCAGTGGCCGAGTTCAAG...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618098.4
3UTR CAA 72 bp TGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTaGCTTTGTTGCATGGGGAGGGGGAGTGTTGGAAAT +
Preference number: 4 (lower is better)
Translates to: CVLSLGENSRSK*LCCMGRGSVGN
Trigger: ATTTCCAACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGATGCCGCCAGCTTCTTaGGGCTGTTCAGGGCAACCA +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTMPPAS*GCSGQP
Trigger: TGGTTGCCCTGAACAGCCTCAAGAAGCTGGCGGCAT...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCTTGGAAGACAATGGTTaGGATTCCAGGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSLEDNG*DSRAEA
Trigger: TGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAA...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTTTGGAAGACAATGGTTaGGATTCCAGGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVLEDNG*DSRAEA
Trigger: TGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAA...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGGAGAATGCCATGACTaGGTTAATCCCTCCATACCA +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESGECHD*VNPSIP
Trigger: TGGTATGGAGGGATTAACTCAGTCATGGCATTCTCC...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATACACCAGCATTTTCCTaGGGAAGGAGGTGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYTPAFS*GRRCLA
Trigger: AGCCAGGCACCTCCTTCCTCAGGAAAATGCTGGTGT...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGGCCTTTAACCTCCTaGAGGGCCCCAATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYRPLTS*RAPICS
Trigger: TGAGCAGATTGGGGCCCTGCAGGAGGTTAAAGGCCT...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGCAGGTGTCCTAACCCTGCAGTGGTTGAGATTGAGCTaGTTTAGACGGCTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: PACPWKNVTSIAGVLTLQWLRLS*FRRLSL
Trigger: CAGCGAAAGCCGTCTAAAGCAGCTCAATCTCAACCA...CTGCAGGGTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGTCCCGCAGGAAGACCTaGAAGGAGAAGGGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTSRRKT*KEKGSL
Trigger: CAGGCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGA...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGAGTAAGTTGCTTTGTTaGATGGGGAGGGGGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PYVALIELEYPGRGSSSRSKLLC*MGRGSV
Trigger: AACACTCCCCCTCCCCATGCAACAAAGCAACTTACT...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTTGTCCTGTGTCACCTaGAGGGTGCAGCCAAAGACC +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYLSCVT*RVQPKT
Trigger: GGTCTTTGGCTGCACCCTCCAGGTGACACAGGACAA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTCAACAGGGTGACAACTaGAGGCTCGGTCACCACCTT +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPQQGDN*RLGHHL
Trigger: AAGGTGGTGACCGAGCCTCCAGTTGTCACCCTGTTG...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAACAGAAGGCCAGCTTaGAGAAGAGGTGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYNRRPA*RRGGPW
Trigger: CCAAGGCCCACCTCTTCTCCAAGCTGGCCTTCTGTT...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTTCGATGGAGCGCAGGTaGTTGTCCTTGAGGTCAAGT +
Preference number: 4 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFSMERR*LSLRSS
Trigger: ACTTGACCTCAAGGACAACCACCTGCGCTCCATCGA...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTCTTGGCTTCCTATCTTaGAAGACAATGGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCLGFLS*KTMVEI
Trigger: AATCTCAACCATTGTCTTCCAAGATAGGAAGCCAAG...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTACACAGGTGTGGTTTTaGTCGGAGAATGCCATGACT +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPTQVWF*SENAMT
Trigger: AGTCATGGCATTCTCCGACCAAAACCACACCTGTGT...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTTCTGTGTCCTCTCCTTaGGAGAGAACTCCAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PETQVWFWSENAMTELIPSVSSP*ERTPEV
Trigger: TACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGA...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTGGTGCCAGGGAACTTaGACCAGAAACTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYWCQGT*TRNWCR
Trigger: TCTGCACCAGTTTCTGGTTCAAGTTCCCTGGCACCA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATATCTTGTCCAACAGGGTaGCAACTGGAGGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSISCPTG*QLEARS
Trigger: TGACCGAGCCTCCAGTTGTCACCCTGTTGGACAAGA...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAATATGTGGCACTAATTaGGCTGGAATATCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESICGTN*AGISRE
Trigger: CTCCCTGGATATTCCAGCTCAATTAGTGCCACATAT...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATACCCAACCAAACCTCCTaGGTCAGTGTTTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIPNQTS*VSVSGE
Trigger: CTCCCCTGAAACACTGACTCAGGAGGTTTGGTTGGG...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGCTCAACCATCCTCCTaGATTGGCCTCTCAAACAGC +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYAQPSS*IGLSNS
Trigger: GCTGTTTGAGAGGCCAATGCAGGAGGATGGTTGAGC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAGGTTGTAGACCAGGATaGCCAGGAACTTACACACTT +
Preference number: 4 (lower is better)
Translates to: WFWSENAMTELIPPYQVPGCRPG*PGTYTL
Trigger: AAGTGTGTAAGTTCCTGGCCATCCTGGTCTACAACC...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAAGAAGAGGTGGGCCTTaGTGTGGTTGCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIRRGGP*CGCSRS
Trigger: GCTTCTGCTGCAACCACACCAAGGCCCACCTCTTCT...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGAGCTTGGAGAAGAGGTaGGCCTTGGTGTGGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTSLEKR*ALVWLQ
Trigger: CTGCAACCACACCAAGGCCCACCTCTTCTCCAAGCT...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACACAGGTGTGGTTTTaGTCGGAGAATGCCATGACT +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVTQVWF*SENAMT
Trigger: AGTCATGGCATTCTCCGACCAAAACCACACCTGTGT...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGGTCCCTGCTTGTCCTTaGAAAAATGTCACCTCTATA +
Preference number: 4 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVVPACP*KNVTSI
Trigger: TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGAC...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGGCCACCAGGAAACTaGTCTTCTCCACATAGACCA +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYRPPGN*SSPHRP
Trigger: TGGTCTATGTGGAGAAGATCAGTTTCCTGGTGGCCT...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTTCAGGGCCACTTACCTaGACCAGAACTACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPSGPLT*TRTTWN
Trigger: ATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGA...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGGGAAATCTATCAGCTaGCTGAAGAGCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: STQRTVKTKVPACPWKNVGKSIS*LKSFVC
Trigger: ACACACAAAGCTCTTCAGGCAGCTGATAGATTTCCC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTCTGTCGGATGTACATaGTGTACAGGATGTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYSVGCT*CTGCRP
Trigger: AGGGCGACATCCTGTACACCATGTACATCCGACAGA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 72 bp CCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTaGGAAAAATGTCACCTCTATAGCAGGTGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: PENSQDQSPCLS*EKCHLYSRCPN
Trigger: GTTAGGACACCTGCTATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGATTGGGTAGACAGATaGTCTTGTCCTGTGTCACCT +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYDWVDR*SCPVSP
Trigger: AGGTGACACAGGACAAGATCATCTGTCTACCCAATC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACTTAATAAAGCTGTATTaGTGCAGGTCCAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHLIKLY*CRSKLF
Trigger: GAACAATTTGGACCTGCAGCAATACAGCTTTATTAA...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATATGTTGGAAATCCCACTaGGATGTGTCGTTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSICWKSH*DVSFPP
Trigger: TGGGGGAAACGACACATCCCAGTGGGATTTCCAACA...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 72 bp GAAATCTATCAGCTGCCTGAAGAGCTTTGTGTGTATTaGTACACCAGCATTTTCCTGAGGAAGGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EIYQLPEELCVY*YTSIFLRKEVP
Trigger: AGGCACCTCCTTCCTCAGGAAAATGCTGGTGTACAAATACACACAAAGCTCTTCAGGCAGCTGATAGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGTTCTCCTGGAGCTCATaGTTGGGTAGACAGATGATC +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTFSWSS*LGRQMI
Trigger: GATCATCTGTCTACCCAATCATGAGCTCCAGGAGAA...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGGAGAATGCCATGACTaGGTTAATCCCTCCATACCA +
Preference number: 4 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIGECHD*VNPSIP
Trigger: TGGTATGGAGGGATTAACTCAGTCATGGCATTCTCC...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR TCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATATATGTGGCACTAATTaGGCTGGAATATCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYICGTN*AGISRE
Trigger: CTCCCTGGATATTCCAGCTCAATTAGTGCCACATAT...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
3UTR CAA 72 bp TATAACACAGCAAACAACTGTGTCTGTGTCCTCTCCTaGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: YNTANNCVCVLS*GENSRSKLLCC
Trigger: GCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGTTTGCTGTGTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTTTAATAAAGCTGTATTaGTGCAGGTCCAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVLIKLY*CRSKLF
Trigger: GAACAATTTGGACCTGCAGCAATACAGCTTTATTAA...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR GCA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGGGGAAATCTATCAGCTaGCTGAAGAGCTTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTGKSIS*LKSFVC
Trigger: ACACACAAAGCTCTTCAGGCAGCTGATAGATTTCCC...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp CTTGGAAGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTGTCCCTGCTTGTCCTTaGAAAAATGTCACCTCTATA +
Preference number: 4 (lower is better)
Translates to: LGRQWLRFQGRSIFKALPVPACP*KNVTSI
Trigger: TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGAC...AGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCTTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CCA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATCTTGGCTTCCTATCTTaGAAGACAATGGTTGAGATT +
Preference number: 4 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYLGFLS*KTMVEI
Trigger: AATCTCAACCATTGTCTTCCAAGATAGGAAGCCAAG...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp CGGGAGGGACGCTGGGCCCAACTCCTGGGTCTCTGGGAGCGGAGCTaGCGCGACTCCCGCAGAGTTCCCGGGCGGGCCGCGAGGGTGAGT +
Preference number: 5 (lower is better)
Translates to: REGRWAQLLGLWERS*RDSRRVPGRAARVS
Trigger: ACTCACCCTCGCGGCCCGCCCGGGAACTCTGCGGGAGTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGCGTCCCTCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618098.4
CDS CCA 90 bp TCTCCTTCTCACCCTCCCCTGCCTTCCCCGGCCCGGTCCCTGCCATaGCCACTATGGTGGCCGCAGCCCGTTCGGTGGCTGCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: SPSHPPLPSPARSLP*PLWWPQPVRWLLGP
Trigger: AGGGCCCAGCAGCCACCGAACGGGCTGCGGCCACCATAGTGGCCATGGCAGGGACCGGGCCGGGGAAGGCAGGGGAGGGTGAGAAGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp GACCCGGCAGCATGCAGAGGGCCAGCTCCAGCCGGCCCGCGGCATTaGGCTGCAGCTTCTGTCGAAGCTTCTCGGGCGTCCACTCGTGGT +
Preference number: 5 (lower is better)
Translates to: DPAACRGPAPAGPRH*AAASVEASRASTRG
Trigger: ACCACGAGTGGACGCCCGAGAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCTGGAGCTGGCCCTCTGCATGCTGCCGGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp CACTGGCTGGCACCTTCCCGGCGTTGCTCCGGAGGGACAACACCTTaGGCTGCTTCAGCTCCCGGAGGCTCTCCAGGGTGGCTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: HWLAPSRRCSGGTTP*AASAPGGSPGWLPE
Trigger: CTCGGGCAGCCACCCTGGAGAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCCAGCCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp GCTGGCACCTTCCCGGCGTTGCTCCGGAGGGACAACACCTTGAGCTaGTTCAGCTCCCGGAGGCTCTCCAGGGTGGCTGCCCGAGCTAGC +
Preference number: 5 (lower is better)
Translates to: AGTFPALLRRDNTLS*FSSRRLSRVAARAS
Trigger: GCTAGCTCGGGCAGCCACCCTGGAGAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 90 bp GGCACCTCGCGGAGCTCCTCGCATTTGACGCGCATCACCTTCAGGTaGTCCCGCAGGAAGACCTGCAAGGAGAAGGGTAGCCTGGCGGGC +
Preference number: 5 (lower is better)
Translates to: GTSRSSSHLTRITFR*SRRKTCKEKGSLAG
Trigger: GCCCGCCAGGCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCGCGAGGTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 90 bp CAGGCTGAGCCTCTGCAGGTGGCCAGCAACGTCGGTCACACTGGCTaGCACCTTCCCGGCGTTGCTCCGGAGGGACAACACCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QAEPLQVASNVGHTG*HLPGVAPEGQHLEL
Trigger: CAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCCAGCCAGTGTGACCGACGTTGCTGGCCACCTGCAGAGGCTCAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 90 bp TTCTGCAGGAGGCCCACCTCGGGTGGCAGGGAGTGTAGCCCATTGTaGGACACATCCAGCAGACGGAGGCCTGAGCACAGGCCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: FCRRPTSGGRECSPL*DTSSRRRPEHRPSW
Trigger: CCAGCTCGGCCTGTGCTCAGGCCTCCGTCTGCTGGATGTGTCCCACAATGGGCTACACTCCCTGCCACCCGAGGTGGGCCTCCTGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGGGCACCTTCCCGGCGTaGCTCCGGAGGGACAACACC +
Preference number: 5 (lower is better)
Translates to: AVLGMGARPASLPETQVWGTFPA*LRRDNT
Trigger: GGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCC...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp GGCACCCCTGCACCTGATCTGACTTGTCTGACCTCGAAGAGCACATaGGGGATAGTCCACAGGGCCGCCGCCCTCCAGCCTCCTCGGGTG +
Preference number: 5 (lower is better)
Translates to: GTPAPDLTCLTSKST*GIVHRAAALQPPRV
Trigger: CACCCGAGGAGGCTGGAGGGCGGCGGCCCTGTGGACTATCCCTCATGTGCTCTTCGAGGTCAGACAAGTCAGATCAGGTGCAGGGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS GCA 90 bp GGGGTCCTCCGAGGAGCCGGACACAGGCAGGCCTGTGACCCTCCCTaGCCAAACTTGTCCAAACCACCAAAGTGTGTGCCCCCACTTCCC +
Preference number: 5 (lower is better)
Translates to: GVLRGAGHRQACDPP*PNLSKPPKCVPPLP
Trigger: GGGAAGTGGGGGCACACACTTTGGTGGTTTGGACAAGTTTGGGCAGGGAGGGTCACAGGCCTGCCTGTGTCCGGCTCCTCGGAGGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS-3UTR CAA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAAGCCGGCCCGCGGCATaGCGCTGCAGCTTCTGTCGA +
Preference number: 5 (lower is better)
Translates to: DGSKASQPARDTGVVLVGSRPAA*RCSFCR
Trigger: TCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCT...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp GCAGCCCAAACACCCAAAGCGGCACCTCGCGGAGCTCCTCGCATTTaGCGCGCATCACCTTCAGGTGGTCCCGCAGGAAGACCTGCAAGG +
Preference number: 5 (lower is better)
Translates to: AAQTPKAAPRGAPRI*RASPSGGPAGRPAR
Trigger: CCTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCGCGAGGTGCCGCTTTGGGTGTTTGGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp TCGCATTTGACGCGCATCACCTTCAGGTGGTCCCGCAGGAAGACCTaGAAGGAGAAGGGTAGCCTGGCGGGCGAGTGGAGCAAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SHLTRITFRWSRRKT*KEKGSLAGEWSKLS
Trigger: GCTCAGCTTGCTCCACTCGCCCGCCAGGCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp AGAGCTGGCTCAGCTGGTTGTCGCCCAGAAGCAACGTCCGCAGCTTaGGGCAGAAGAAGAGCTCTTCGGGCAGGGCCTCCAGGGCATTGT +
Preference number: 5 (lower is better)
Translates to: RAGSAGCRPEATSAA*GRRRALRAGPPGHC
Trigger: ACAATGCCCTGGAGGCCCTGCCCGAAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp GCGATCTGGTTGTGCCACAGCCTGAGCGTGACCAGCTTCCGGCAGTaGTGGAAGCTGAGGATTTCCTCGATGGAGCGCAGGTGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: AIWLCHSLSVTSFRQ*WKLRISSMERRWLS
Trigger: GGACAACCACCTGCGCTCCATCGAGGAAATCCTCAGCTTCCAGCACTGCCGGAAGCTGGTCACGCTCAGGCTGTGGCACAACCAGATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGCAGGGTTTGAGCACCTaGAACGCAGGCTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: AVLGMGARPASLPETQVWQGLST*NAGCCS
Trigger: GGAACAGCAGCCTGCGTTCAAGGTGCTCAAACCCTG...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCGGAGGGACAACACCTaGAGCTGCTTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: SWNIQGEAAVLGMGARPARRDNT*SCFSSR
Trigger: CCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp GGCCTTGGTGTGGTTGCAGCAGAAGCTGGCGTAGCCCGTGACCTCTaGCGTCTCCACCCTACAGGCCACCAGGAAACTGATCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: GLGVVAAEAGVARDL*RLHPTGHQETDLLH
Trigger: GTGGAGAAGATCAGTTTCCTGGTGGCCTGTAGGGTGGAGACGTCAGAGGTCACGGGCTACGCCAGCTTCTGCTGCAACCACACCAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp TCGGCCAGCACGTCCCACCAGGGTTTGAGCACCTTGAACGCAGGCTaGTGTTCCGTGAACTGCTTGAACTCGGCCACTGGGATCATGCTG +
Preference number: 5 (lower is better)
Translates to: SASTSHQGLSTLNAG*CSVNCLNSATGIML
Trigger: CAGCATGATCCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCAGCCTGCGTTCAAGGTGCTCAAACCCTGGTGGGACGTGCTGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000618098.4
CDS-3UTR CAA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGATGGAGCGCAGGTGGTaGTCCTTGAGGTCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: AVLGMGARPASLPETQVWMERRW*SLRSSS
Trigger: GGAACTTGACCTCAAGGACAACCACCTGCGCTCCAT...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGAGGGAGTGTAGCCCATaGTGGGACACATCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: AVLGMGARPASLPETQVWRECSP*WDTSSR
Trigger: TCTGCTGGATGTGTCCCACAATGGGCTACACTCCCT...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCTCTAAGCGGTTGCCTTaGAGCTCCAGGCGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: SWNIQGEAAVLGMGARPASKRLP*SSRRLR
Trigger: CCTCAGCCGCCTGGAGCTCAAAGGCAACCGCTTAGA...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp CCCAGAACCAAGCGGCCACTGTTCCCCTCTGGGCACCCCTGCACCTaGTCTGACTTGTCTGACCTCGAAGAGCACATGAGGGATAGTCCA +
Preference number: 5 (lower is better)
Translates to: PRTKRPLFPSGHPCT*SDLSDLEEHMRDSP
Trigger: TGGACTATCCCTCATGTGCTCTTCGAGGTCAGACAAGTCAGATCAGGTGCAGGGGTGCCCAGAGGGGAACAGTGGCCGCTTGGTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS CCA 90 bp ATCTGGTTGTGCCACAGCCTGAGCGTGACCAGCTTCCGGCAGTGCTaGAAGCTGAGGATTTCCTCGATGGAGCGCAGGTGGTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: IWLCHSLSVTSFRQC*KLRISSMERRWLSL
Trigger: CAAGGACAACCACCTGCGCTCCATCGAGGAAATCCTCAGCTTCCAGCACTGCCGGAAGCTGGTCACGCTCAGGCTGTGGCACAACCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGATGTTCCGTGAACTGCTaGAACTCGGCCACTGGGATC +
Preference number: 5 (lower is better)
Translates to: DGSKASQPARDTGVVLVGCSVNC*NSATGI
Trigger: GATCCCAGTGGCCGAGTTCAAGCAGTTCACGGAACA...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCAGGGTTTGAGCACCTaGAACGCAGGCTGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: SWNIQGEAAVLGMGARPAQGLST*NAGCCS
Trigger: GGAACAGCAGCCTGCGTTCAAGGTGCTCAAACCCTG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GCAGTTCTAGGGATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTGCTCACCCTCCTTCTaGTCCAACAGGGTGACAACT +
Preference number: 5 (lower is better)
Translates to: AVLGMGARPASLPETQVWCSPSF*SNRVTT
Trigger: AGTTGTCACCCTGTTGGACAAGAAGGAGGGTGAGCA...CCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATCCCTAGAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGAGCCGGCCCGCGGCATaGCGCTGCAGCTTCTGTCGA +
Preference number: 5 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRSRPAA*RCSFCR
Trigger: TCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCT...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GATGGGAGCAAGGCCAGCCAGCCTGCCAGAGACACAGGTGTGGTTTTGGTCGGAGTAAAATGTCATAGGTaGGGCCAGGCGCAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: DGSKASQPARDTGVVLVGVKCHR*GQAQWL
Trigger: GAGCCACTGCGCCTGGCCCAACCTATGACATTTTAC...TCCGACCAAAACCACACCTGTGTCTCTGGCAGGCTGGCTGGCCTTGCTCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618098.4
CDS GCA 90 bp CCTGTGACCCTCCCTGCCCAAACTTGTCCAAACCACCAAAGTGTGTaGCCCCACTTCCCTCTTAGCCTGGCCTTAGTCACCCTCCATGCA +
Preference number: 5 (lower is better)
Translates to: PVTLPAQTCPNHQSV*PHFPLSLALVTLHA
Trigger: TGCATGGAGGGTGACTAAGGCCAGGCTAAGAGGGAAGTGGGGGCACACACTTTGGTGGTTTGGACAAGTTTGGGCAGGGAGGGTCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS-3UTR CAA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCAGACGGGCCCCATCGTaGTGCAGGCTGAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIRRAPS*CRLSLC
Trigger: GCAGAGGCTCAGCCTGCACAACGATGGGGCCCGTCT...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGCCACAGCGCCCGGCCCTGATACCTTTACGTCAGCATTTCCCAACATACTGTCATTCCTCCTCCATCTaGTCCCGCACTTCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: EPQRPALIPLRQHFPTYCHSSSI*SRTSAG
Trigger: GCCGGCAGAAGTGCGGGACAAGATGGAGGAGGAATG...ACAGTATGTTGGGAAATGCTGACGTAAAGGTATCAGGGCCGGGCGCTGTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGCGGAAGGAGTACTCCTaGAGGGGCCGGTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRRKEYS*RGRWKS
Trigger: GCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCG...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGAGCGCCTCTAAGCGGTaGCCTTTGAGCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRSASKR*PLSSRR
Trigger: CCGCCTGGAGCTCAAAGGCAACCGCTTAGAGGCGCT...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACCATTCCTCCTCCATCTaGTCCCGCACTTCTGCCGGC +
Preference number: 5 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHHSSSI*SRTSAG
Trigger: GCCGGCAGAAGTGCGGGACAAGATGGAGGAGGAATG...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGATGGGAGCAAGGCCAGCCCACTCGTGGTTGAGATaGAGCTGCTTTAGACGGCTT +
Preference number: 5 (lower is better)
Translates to: SWNIQGEAAVLGMGARPAHSWLR*SCFRRL
Trigger: AAGCCGTCTAAAGCAGCTCAATCTCAACCACGAGTG...GGCTGGCCTTGCTCCCATCCCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTCGGAGGGACAACACCTaGAGCTGCTTCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVRRDNT*SCFSSR
Trigger: CCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCG...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCAGACGGGCCCCATCGTaGTGCAGGCTGAGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: STQRTVKTKVPACPWKNVRRAPS*CRLSLC
Trigger: GCAGAGGCTCAGCCTGCACAACGATGGGGCCCGTCT...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGAGCTGGCTCAGCTGGTaGTCGCCCAGAAGCAACGTC +
Preference number: 5 (lower is better)
Translates to: VLSLGENSRSKLLCCMGRSWLSW*SPRSNV
Trigger: GACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCT...CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 90 bp CTGTATTGCTGCAGGTCCAAATTGTTCTTAAGGCCTTTAACCTCCTaGAGGGCCCCAATCTGCTCAGGGATCCCCCGAGGCAGCAATTGC +
Preference number: 5 (lower is better)
Translates to: LYCCRSKLFLRPLTS*RAPICSGIPRGSNC
Trigger: GCAATTGCTGCCTCGGGGGATCCCTGAGCAGATTGGGGCCCTGCAGGAGGTTAAAGGCCTTAAGAACAATTTGGACCTGCAGCAATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000598224.5
ENST00000599367.1
ENST00000600345.1
ENST00000618098.4
CDS-3UTR CAA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTACGTCCCACCAGGGTTaGAGCACCTTGAACGCAGGC +
Preference number: 5 (lower is better)
Translates to: PETQVWFWSENAMTELIPTSHQG*STLNAG
Trigger: GCCTGCGTTCAAGGTGCTCAAACCCTGGTGGGACGT...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACGGAAGGAGTACTCCTaGAGGGGCCGGTGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: WFWSENAMTELIPPYQVPRKEYS*RGRWKS
Trigger: GCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCG...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCAGAGACACAGGTGTGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCGGAGCTCCTCGCATTaGACGCGCATCACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PETQVWFWSENAMTELIPRSSSH*TRITFR
Trigger: CCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCG...AGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCACACCTGTGTCTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGGCACCTTCCCGGCGTaGCTCCGGAGGGACAACACC +
Preference number: 5 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYGTFPA*LRRDNT
Trigger: GGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 90 bp AGCAATTGCTGGCACGGGGCCTCTGATAAGTTCTCCTGGAGCTCATaGTTGGGTAGACAGATGATCTTGTCCTGTGTCACCTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SNCWHGASDKFSWSS*LGRQMILSCVTWRV
Trigger: CACCCTCCAGGTGACACAGGACAAGATCATCTGTCTACCCAATCATGAGCTCCAGGAGAACTTATCAGAGGCCCCGTGCCAGCAATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000618098.4
CDS TCA 90 bp AGCAATTGCTGGCACGGGGCCTCTGATAAGTTCTCCTGGAGCTCATaGTTGGGTAGACAGATGATCTTGTCCTGTGTCACCGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: SNCWHGASDKFSWSS*LGRQMILSCVTVPG
Trigger: TCCCGGAACGGTGACACAGGACAAGATCATCTGTCTACCCAATCATGAGCTCCAGGAGAACTTATCAGAGGCCCCGTGCCAGCAATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600345.1
CDS CCA 90 bp TGGCCAGGAACTTACACACTTTCAGCACCGTCTGTCGGATGTACATaGTGTACAGGATGTCGCCCTCTTCCACGTGCATGCGGAACTTCT +
Preference number: 5 (lower is better)
Translates to: WPGTYTLSAPSVGCT*CTGCRPLPRACGTS
Trigger: AGAAGTTCCGCATGCACGTGGAAGAGGGCGACATCCTGTACACCATGTACATCCGACAGACGGTGCTGAAAGTGTGTAAGTTCCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCTGTTCCGTGAACTGCTaGAACTCGGCCACTGGGATC +
Preference number: 5 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGICSVNC*NSATGI
Trigger: GATCCCAGTGGCCGAGTTCAAGCAGTTCACGGAACA...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGGAGAAGAGGTGGGCCTaGGTGTGGTTGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PYVALIELEYPGRGSSSREKRWA*VWLQQK
Trigger: CTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTC...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TACCTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAAATGCCGCCAGCTTCTaGAGGCTGTTCAGGGCAACC +
Preference number: 5 (lower is better)
Translates to: YLEYLGTDSWPPTKPPESNAASF*RLFRAT
Trigger: GGTTGCCCTGAACAGCCTCAAGAAGCTGGCGGCATT...TGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCATGGAGCGCAGGTGGTaGTCCTTGAGGTCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGIMERRW*SLRSSS
Trigger: GGAACTTGACCTCAAGGACAACCACCTGCGCTCCAT...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTTCTAAGCGGTTGCCTTaGAGCTCCAGGCGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPSKRLP*SSRRLR
Trigger: CCTCAGCCGCCTGGAGCTCAAAGGCAACCGCTTAGA...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTCTGGTGCCAGGGAACTaGAACCAGAAACTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVLVPGN*NQKLVQ
Trigger: CTGCACCAGTTTCTGGTTCAAGTTCCCTGGCACCAG...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACATGAAGTGTTCAATCTaGGAGCTGGTGCCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHMKCSI*ELVPGN
Trigger: GTTCCCTGGCACCAGCTCCAAGATTGAACACTTCAT...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CTGGAATATTTAGGAACAGACTCCTGGCCCCCAACCAAACCTCCTGAGTCAGTGATGAAGTGTTCAATCTaGGAGCTGGTGCCAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LEYLGTDSWPPTKPPESVMKCSI*ELVPGN
Trigger: GTTCCCTGGCACCAGCTCCAAGATTGAACACTTCAT...CACTGACTCAGGAGGTTTGGTTGGGGGCCAGGAGTCTGTTCCTAAATATTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTAGCAACGTCCGCAGCTaGCGGCAGAAGAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFSNVRS*RQKKSS
Trigger: AGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCT...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGAGCGCCTCTAAGCGGTaGCCTTTGAGCTCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTSASKR*PLSSRR
Trigger: CCGCCTGGAGCTCAAAGGCAACCGCTTAGAGGCGCT...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGGTAGACAGATGATCTaGTCCTGTGTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPGRQMI*SCVTWR
Trigger: CCTCCAGGTGACACAGGACAAGATCATCTGTCTACC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TGGTTTTGGTCGGAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCAGGTAGACAGATGATCTaGTCCTGTGTCACCTGGAGG +
Preference number: 5 (lower is better)
Translates to: WFWSENAMTELIPPYQVPGRQMI*SCVTWR
Trigger: CCTCCAGGTGACACAGGACAAGATCATCTGTCTACC...TGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTCCGACCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAATGCCATGACTGAGTTAATCCCTCCATACCAGGTTCCACCCCAGCTCCACTGCTGCAGGTCCAAATaGTTCTTAAGGCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: ENAMTELIPPYQVPPQLHCCRSK*FLRPLT
Trigger: GGTTAAAGGCCTTAAGAACAATTTGGACCTGCAGCA...GTGGAGCTGGGGTGGAACCTGGTATGGAGGGATTAACTCAGTCATGGCATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTCACTCGTGGTTGAGATaGAGCTGCTTTAGACGGCTT +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVHSWLR*SCFRRL
Trigger: AAGCCGTCTAAAGCAGCTCAATCTCAACCACGAGTG...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGCGGAGCTCCTCGCATTaGACGCGCATCACCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTRSSSH*TRITFR
Trigger: CCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCG...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp ACAACTGTGTCTGTGTCCTCTCCTTGGGAGAGAACTCCAGAAGTAAGTTGCTTTAGGGAGTGTAGCCCATaGTGGGACACATCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: TTVSVSSPWERTPEVSCFRECSP*WDTSSR
Trigger: TCTGCTGGATGTGTCCCACAATGGGCTACACTCCCT...AAAGCAACTTACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGACACAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGAGCTGGCTCAGCTGGTaGTCGCCCAGAAGCAACGTC +
Preference number: 5 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTSWLSW*SPRSNV
Trigger: GACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCT...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGACACAGGTGTGGTTTaGGTCGGAGAATGCCATGAC +
Preference number: 5 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPDTGVV*VGECHD
Trigger: GTCATGGCATTCTCCGACCAAAACCACACCTGTGTC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGCACCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCGACACAGGTGTGGTTTaGGTCGGAGAATGCCATGAC +
Preference number: 5 (lower is better)
Translates to: STQRTVKTKVPACPWKNVDTGVV*VGECHD
Trigger: GTCATGGCATTCTCCGACCAAAACCACACCTGTGTC...GACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGGAGAAGAGGTGGGCCTaGGTGTGGTTGCAGCAGAAG +
Preference number: 5 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTEKRWA*VWLQQK
Trigger: CTTCTGCTGCAACCACACCAAGGCCCACCTCTTCTC...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAAATGCCGCCAGCTTCTaGAGGCTGTTCAGGGCAACC +
Preference number: 5 (lower is better)
Translates to: RTVKTKVPACPWKNVTSINAASF*RLFRAT
Trigger: GGTTGCCCTGAACAGCCTCAAGAAGCTGGCGGCATT...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAAGCAACGTCCGCAGCTaGCGGCAGAAGAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: RTVKTKVPACPWKNVTSISNVRS*RQKKSS
Trigger: AGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCT...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATCTGGCCTGGACCCACTaGGCTTCCTATCTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYLAWTH*ASYLGR
Trigger: TCTTCCAAGATAGGAAGCCAAGTGGGTCCAGGCCAG...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCATATGTGGCACTAATTGAGCTGGAATATCCAGGGAGAGGCAGCAGTTCTAGGAACTCCAGAAGTAAGTaGCTTTGTTGCATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PYVALIELEYPGRGSSSRNSRSK*LCCMGR
Trigger: CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTT...CCTAGAACTGCTGCCTCTCCCTGGATATTCCAGCTCAATTAGTGCCACATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTAACTCCAGAAGTAAGTaGCTTTGTTGCATGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVNSRSK*LCCMGR
Trigger: CCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CCCAGAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTGGGGACTGGGATATTTaGTTTTGCACCGACTCCCTA +
Preference number: 5 (lower is better)
Translates to: PREQSRPKSLLVLGKMSPGDWDI*FCTDSL
Trigger: TAGGGAGTCGGTGCAAAACAAAATATCCCAGTCCCC...AGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GGAGGTGCCTGGCTTCATCAGTTTCTCAAAGGGTCTAGGACCTCAAAAGGGATCAGTCCCTGCTTGTCCTaGGAAAAATGTCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: GGAWLHQFLKGSRTSKGISPCLS*EKCHLY
Trigger: ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACT...GATCCCTTTTGAGGTCCTAGACCCTTTGAGAAACTGATGAAGCCAGGCACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp CTCAGGGCCACTTACCTGCACCAGAACTACCTGGAATATTTAGGAACAGACTCCTGCTGCAGGTCCAAATaGTTCTTAAGGCCTTTAACC +
Preference number: 5 (lower is better)
Translates to: LRATYLHQNYLEYLGTDSCCRSK*FLRPLT
Trigger: GGTTAAAGGCCTTAAGAACAATTTGGACCTGCAGCA...GGAGTCTGTTCCTAAATATTCCAGGTAGTTCTGGTGCAGGTAAGTGGCCCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATTGCTCACCCTCCTTCTaGTCCAACAGGGTGACAACT +
Preference number: 5 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYCSPSF*SNRVTT
Trigger: AGTTGTCACCCTGTTGGACAAGAAGGAGGGTGAGCA...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTAGTCCCTGCTTGTCCTaGGAAAAATGTCACCTCTAT +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVSPCLS*EKCHLY
Trigger: ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACT...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATAGTCTGTGTCCTCTCCTaGGGAGAGAACTCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RTVKTKVPACPWKNVTSIVCVLS*GENSRS
Trigger: ACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGAC...TATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp AGACAATGGTTGAGATTCCAGGGCAGAAGCATTTTTAAGGCTCTACCTAAAACGGTCTGTGTCCTCTCCTaGGGAGAGAACTCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RQWLRFQGRSIFKALPKTVCVLS*GENSRS
Trigger: ACTTCTGGAGTTCTCTCCCAAGGAGAGGACACAGAC...CGTTTTAGGTAGAGCCTTAAAAATGCTTCTGCCCTGGAATCTCAACCATTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp TTGGGAGAGAACTCCAGAAGTAAGTTGCTTTGTTGCATGGGGAGGGGGAGTGTTGAGCTTTGTGTGTATTaGTACACCAGCATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LGENSRSKLLCCMGRGSVELCVY*YTSIFL
Trigger: CAGGAAAATGCTGGTGTACAAATACACACAAAGCTC...AACACTCCCCCTCCCCATGCAACAAAGCAACTTACTTCTGGAGTTCTCTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS-3UTR CAA 90 bp GAGAACAGTCAAGACCAAAGTCCCTGCTTGTCCTTGGAAAAATGTCACCTCTATGAGCTTTGTGTGTATTaGTACACCAGCATTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ENSQDQSPCLSLEKCHLYELCVY*YTSIFL
Trigger: CAGGAAAATGCTGGTGTACAAATACACACAAAGCTC...ATAGAGGTGACATTTTTCCAAGGACAAGCAGGGACTTTGGTCTTGACTGTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp CGCTGGGCCCAACTCCTGGGTCTCTGGGAGCGGAGCTaGCGCGACTCCCGCAGAGTTCCCGGGCGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: RWAQLLGLWERS*RDSRRVPGRAA
Trigger: CGCGGCCCGCCCGGGAACTCTGCGGGAGTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 72 bp TGCTGCCGTTCCGGGAGGGACGCTGGGCCCAACTCCTaGGTCTCTGGGAGCGGAGCTGCCGCGACTCCCGCA +
Preference number: 6 (lower is better)
Translates to: CCRSGRDAGPNS*VSGSGAAATPA
Trigger: TGCGGGAGTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGCGTCCCTCCCGGAACGGCAGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306708.11
CDS CCA 72 bp CCTTCCCCGGCCCGGTCCCTGCCATGGCCACTATGGTaGCCGCAGCCCGTTCGGTGGCTGCTGGGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: PSPARSLPWPLW*PQPVRWLLGPS
Trigger: AGAAGGGCCCAGCAGCCACCGAACGGGCTGCGGCCACCATAGTGGCCATGGCAGGGACCGGGCCGGGGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306708.11
ENST00000600345.1
ENST00000618098.4
CDS CAA 90 bp AGACCCGGCAGCATGCAGAGGGCCAGCTCCAGCCGGCCCGCGGCATaGCGCTGCAGCTTCTGTCGAAGCTTCTCGGGCGTCCACTCGTGG +
Preference number: 6 (lower is better)
Translates to: RPGSMQRASSSRPAA*RCSFCRSFSGVHSW
Trigger: CCACGAGTGGACGCCCGAGAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCTGGAGCTGGCCCTCTGCATGCTGCCGGGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp CAGAGGGCCAGCTCCAGCCGGCCCGCGGCATTGCGCTaGAGCTTCTGTCGAAGCTTCTCGGGCGTCCACTCG +
Preference number: 6 (lower is better)
Translates to: QRASSSRPAALR*SFCRSFSGVHS
Trigger: CGAGTGGACGCCCGAGAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCTGGAGCTGGCCCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp GCATGCAGAGGGCCAGCTCCAGCCGGCCCGCGGCATTaGGCTGCAGCTTCTGTCGAAGCTTCTCGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: ACRGPAPAGPRH*AAASVEASRAS
Trigger: GGACGCCCGAGAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCTGGAGCTGGCCCTCTGCATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 72 bp GCCACTGGGATCATGCTGCCGTTCCGGGAGGGACGCTaGGCCCAACTCCTGGGTCTCTGGGAGCGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: ATGIMLPFREGR*AQLLGLWERSC
Trigger: GCAGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGCGTCCCTCCCGGAACGGCAGCATGATCCCAGTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306708.11
CDS CCA 72 bp TCTCTTCGTTCCGGGAGGGACGCTGGGCCCAACTCCTaGGTCTCTGGGAGCGGAGCTGCCGCGACTCCCGCA +
Preference number: 6 (lower is better)
Translates to: SLRSGRDAGPNS*VSGSGAAATPA
Trigger: TGCGGGAGTCGCGGCAGCTCCGCTCCCAGAGACCCAGGAGTTGGGCCCAGCGTCCCTCCCGGAACGAAGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618098.4
CDS GCA 72 bp CATGGCCACTATGGTGGCCGCAGCCCGTTCGGTGGCTaGTGGGCCCTTCTGGTTCTCCCCGGAGACCTCGGA +
Preference number: 6 (lower is better)
Translates to: HGHYGGRSPFGG*WALLVLPGDLG
Trigger: TCCGAGGTCTCCGGGGAGAACCAGAAGGGCCCAGCAGCCACCGAACGGGCTGCGGCCACCATAGTGGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306708.11
ENST00000600345.1
ENST00000618098.4
CDS CCA 72 bp CTGAGGGCACCCACGTGGGGCGAGAGCTGGCTCAGCTaGTTGTCGCCCAGAAGCAACGTCCGCAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: LRAPTWGESWLS*LSPRSNVRSLR
Trigger: CCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCTCGCCCCACGTGGGTGCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 72 bp AGCATGCAGAGGGCCAGCTCCAGCCGGCCCGCGGCATaGCGCTGCAGCTTCTGTCGAAGCTTCTCGGGCGTC +
Preference number: 6 (lower is better)
Translates to: SMQRASSSRPAA*RCSFCRSFSGV
Trigger: GACGCCCGAGAAGCTTCGACAGAAGCTGCAGCGCAATGCCGCGGGCCGGCTGGAGCTGGCCCTCTGCATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 72 bp AGGGCACCCACGTGGGGCGAGAGCTGGCTCAGCTGGTaGTCGCCCAGAAGCAACGTCCGCAGCTTGCGGCAG +
Preference number: 6 (lower is better)
Translates to: RAPTWGESWLSW*SPRSNVRSLRQ
Trigger: CTGCCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCTCGCCCCACGTGGGTGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp GCACCTTCCCGGCGTTGCTCCGGAGGGACAACACCTTaGGCTGCTTCAGCTCCCGGAGGCTCTCCAGGGTGG +
Preference number: 6 (lower is better)
Translates to: APSRRCSGGTTP*AASAPGGSPGW
Trigger: CCACCCTGGAGAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp TTCCCGGCGTTGCTCCGGAGGGACAACACCTTGAGCTaGTTCAGCTCCCGGAGGCTCTCCAGGGTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: FPALLRRDNTLS*FSSRRLSRVAA
Trigger: GGCAGCCACCCTGGAGAGCCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 72 bp CCTCTGCAGGTGGCCAGCAACGTCGGTCACACTGGCTaGCACCTTCCCGGCGTTGCTCCGGAGGGACAACAC +
Preference number: 6 (lower is better)
Translates to: PLQVASNVGHTG*HLPGVAPEGQH
Trigger: GTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCCAGCCAGTGTGACCGACGTTGCTGGCCACCTGCAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 90 bp AGGTGGCCAGCAACGTCGGTCACACTGGCTGGCACCTTCCCGGCGTaGCTCCGGAGGGACAACACCTTGAGCTGCTTCAGCTCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: RWPATSVTLAGTFPA*LRRDNTLSCFSSRR
Trigger: CCTCCGGGAGCTGAAGCAGCTCAAGGTGTTGTCCCTCCGGAGCAACGCCGGGAAGGTGCCAGCCAGTGTGACCGACGTTGCTGGCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 90 bp AGGTTCTGCAGGAGGCCCACCTCGGGTGGCAGGGAGTGTAGCCCATaGTGGGACACATCCAGCAGACGGAGGCCTGAGCACAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: RFCRRPTSGGRECSP*WDTSSRRRPEHRPS
Trigger: GCTCGGCCTGTGCTCAGGCCTCCGTCTGCTGGATGTGTCCCACAATGGGCTACACTCCCTGCCACCCGAGGTGGGCCTCCTGCAGAACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp AGGAGAAGGGTAGCCTGGCGGGCGAGTGGAGCAAGCTaGGCTCCTGCAAGTGCACCAGCTGTGACAGCCCCG +
Preference number: 6 (lower is better)
Translates to: RRRVAWRASGAS*APASAPAVTAP
Trigger: CGGGGCTGTCACAGCTGGTGCACTTGCAGGAGCTCAGCTTGCTCCACTCGCCCGCCAGGCTACCCTTCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp ACGCGCATCACCTTCAGGTGGTCCCGCAGGAAGACCTaGAAGGAGAAGGGTAGCCTGGCGGGCGAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: TRITFRWSRRKT*KEKGSLAGEWS
Trigger: GCTCCACTCGCCCGCCAGGCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 72 bp AGGCCCACCTCGGGTGGCAGGGAGTGTAGCCCATTGTaGGACACATCCAGCAGACGGAGGCCTGAGCACAGG +
Preference number: 6 (lower is better)
Translates to: RPTSGGRECSPL*DTSSRRRPEHR
Trigger: CCTGTGCTCAGGCCTCCGTCTGCTGGATGTGTCCCACAATGGGCTACACTCCCTGCCACCCGAGGTGGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 72 bp AGGAGGCCCACCTCGGGTGGCAGGGAGTGTAGCCCATaGTGGGACACATCCAGCAGACGGAGGCCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: RRPTSGGRECSP*WDTSSRRRPEH
Trigger: GTGCTCAGGCCTCCGTCTGCTGGATGTGTCCCACAATGGGCTACACTCCCTGCCACCCGAGGTGGGCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 90 bp CCACAGTTGCCAAGTTCTTCTGGCAGCGCCTCTAAGCGGTTGCCTTaGAGCTCCAGGCGGCTGAGGGCTCTGAGGGCACCCACGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PQLPSSSGSASKRLP*SSRRLRALRAPTWG
Trigger: GCCCCACGTGGGTGCCCTCAGAGCCCTCAGCCGCCTGGAGCTCAAAGGCAACCGCTTAGAGGCGCTGCCAGAAGAACTTGGCAACTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp CAAGGCCTGAAAACATCTGCCTCGATGCTCCCTGACTaGAGACACTCAGCGTCTGGGCCAGCCCCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: QGLKTSASMLPD*RHSASGPAPAP
Trigger: GGGAGCCGGGGCTGGCCCAGACGCTGAGTGTCTGCAGTCAGGGAGCATCGAGGCAGATGTTTTCAGGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS GCA 72 bp CTGGCCTTAGTCACCCTCCATGCAGACGTCACCACCTaGCCAGAACCAAGCGGCCACTGTTCCCCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: LALVTLHADVTT*PEPSGHCSPLG
Trigger: GCCCAGAGGGGAACAGTGGCCGCTTGGTTCTGGGCAGGTGGTGACGTCTGCATGGAGGGTGACTAAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS CCA 72 bp AGGCTGCTGTTCCGTGAACTGCTTGAACTCGGCCACTaGGATCATGCTGCCGTTCCGGGAGGGACGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RLLFRELLELGH*DHAAVPGGTLG
Trigger: GCCCAGCGTCCCTCCCGGAACGGCAGCATGATCCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306708.11
CDS CAA 72 bp CTCAGCTGGTTGTCGCCCAGAAGCAACGTCCGCAGCTaGCGGCAGAAGAAGAGCTCTTCGGGCAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LSWLSPRSNVRS*RQKKSSSGRAS
Trigger: GGAGGCCCTGCCCGAAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 72 bp CCAAGTTCTTCTGGCAGCGCCTCTAAGCGGTTGCCTTaGAGCTCCAGGCGGCTGAGGGCTCTGAGGGCACCC +
Preference number: 6 (lower is better)
Translates to: PSSSGSASKRLP*SSRRLRALRAP
Trigger: GGGTGCCCTCAGAGCCCTCAGCCGCCTGGAGCTCAAAGGCAACCGCTTAGAGGCGCTGCCAGAAGAACTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 90 bp CGCAGCCCAAACACCCAAAGCGGCACCTCGCGGAGCTCCTCGCATTaGACGCGCATCACCTTCAGGTGGTCCCGCAGGAAGACCTGCAAG +
Preference number: 6 (lower is better)
Translates to: RSPNTQSGTSRSSSH*TRITFRWSRRKTCK
Trigger: CTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCGCGAGGTGCCGCTTTGGGTGTTTGGGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 90 bp GAGAGCTGGCTCAGCTGGTTGTCGCCCAGAAGCAACGTCCGCAGCTaGCGGCAGAAGAAGAGCTCTTCGGGCAGGGCCTCCAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: ESWLSWLSPRSNVRS*RQKKSSSGRASRAL
Trigger: CAATGCCCTGGAGGCCCTGCCCGAAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGAGCCAGCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp CCTTGGTGTGGTTGCAGCAGAAGCTGGCGTAGCCCGTaGCCTCTGACGTCTCCACCCTACAGGCCACCAGGA +
Preference number: 6 (lower is better)
Translates to: PWCGCSRSWRSP*PLTSPPYRPPG
Trigger: TCCTGGTGGCCTGTAGGGTGGAGACGTCAGAGGTCACGGGCTACGCCAGCTTCTGCTGCAACCACACCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp ACACCCAAAGCGGCACCTCGCGGAGCTCCTCGCATTTaGCGCGCATCACCTTCAGGTGGTCCCGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: TPKAAPRGAPRI*RASPSGGPAGR
Trigger: TCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCGCGAGGTGCCGCTTTGGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp TCAGCTGGTTGTCGCCCAGAAGCAACGTCCGCAGCTTaGGGCAGAAGAAGAGCTCTTCGGGCAGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: SAGCRPEATSAA*GRRRALRAGPP
Trigger: TGGAGGCCCTGCCCGAAGAGCTCTTCTTCTGCCGCAAGCTGCGGACGTTGCTTCTGGGCGACAACCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp CGAGGAGCCGGACACAGGCAGGCCTGTGACCCTCCCTaGCCAAACTTGTCCAAACCACCAAAGTGTGTGCCC +
Preference number: 6 (lower is better)
Translates to: RGAGHRQACDPP*PNLSKPPKCVP
Trigger: GGGCACACACTTTGGTGGTTTGGACAAGTTTGGGCAGGGAGGGTCACAGGCCTGCCTGTGTCCGGCTCCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS CCA 72 bp TGCCACAGCCTGAGCGTGACCAGCTTCCGGCAGTGCTaGAAGCTGAGGATTTCCTCGATGGAGCGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: CHSLSVTSFRQC*KLRISSMERRW
Trigger: CCACCTGCGCTCCATCGAGGAAATCCTCAGCTTCCAGCACTGCCGGAAGCTGGTCACGCTCAGGCTGTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CCA 72 bp AGGCTGCTGTTCCGTGAACTGCTTGAACTCGGCCACTaGGATCATGCTGCCTGTGGGACGGGACGAGACGGG +
Preference number: 6 (lower is better)
Translates to: RLLFRELLELGH*DHAACGTGRDG
Trigger: CCCGTCTCGTCCCGTCCCACAGGCAGCATGATCCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS CAA 72 bp AACACCCAAAGCGGCACCTCGCGGAGCTCCTCGCATTaGACGCGCATCACCTTCAGGTGGTCCCGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: NTQSGTSRSSSH*TRITFRWSRRK
Trigger: CTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCGCGAGGTGCCGCTTTGGGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp CAGTCTCCTCCCGCACGGAACGGAAGGAGTACTCCTTaGGGGGCCGGTGGAAGAGCCAGTAGAGCGTGTAGA +
Preference number: 6 (lower is better)
Translates to: QSPPARNGRSTP*GAGGRASRACR
Trigger: TCTACACGCTCTACTGGCTCTTCCACCGGCCCCTCAAGGAGTACTCCTTCCGTTCCGTGCGGGAGGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp GCACCTGATCTGACTTGTCTGACCTCGAAGAGCACATaGGGGATAGTCCACAGGGCCGCCGCCCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: APDLTCLTSKST*GIVHRAAALQP
Trigger: AGGCTGGAGGGCGGCGGCCCTGTGGACTATCCCTCATGTGCTCTTCGAGGTCAGACAAGTCAGATCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599367.1
CDS CCA 72 bp CGGAGCTCCTCGCATTTGACGCGCATCACCTTCAGGTaGTCCCGCAGGAAGACCTGCAAGGAGAAGGGTAGC +
Preference number: 6 (lower is better)
Translates to: RSSSHLTRITFR*SRRKTCKEKGS
Trigger: GCTACCCTTCTCCTTGCAGGTCTTCCTGCGGGACCACCTGAAGGTGATGCGCGTCAAATGCGAGGAGCTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS CAA 72 bp CAGTTGCCAAGTTCTTCTGGCAGCGCCTCTAAGCGGTaGCCTTTGAGCTCCAGGCGGCTGAGGGCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: QLPSSSGSASKR*PLSSRRLRALR
Trigger: CCTCAGAGCCCTCAGCCGCCTGGAGCTCAAAGGCAACCGCTTAGAGGCGCTGCCAGAAGAACTTGGCAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp GTGGTTGCAGCAGAAGCTGGCGTAGCCCGTGACCTCTaGCGTCTCCACCCTACAGGCCACCAGGAAACTGAT +
Preference number: 6 (lower is better)
Translates to: VVAAEAGVARDL*RLHPTGHQETD
Trigger: ATCAGTTTCCTGGTGGCCTGTAGGGTGGAGACGTCAGAGGTCACGGGCTACGCCAGCTTCTGCTGCAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp GGGGAAGGTGATATCGCAGATGGCCTCCAGCCTGAGTaGCTCCACCTCACTGAGCTCAAAGACGGTGTCGGG +
Preference number: 6 (lower is better)
Translates to: GEGDIADGLQPE*LHLTELKDGVG
Trigger: CCCGACACCGTCTTTGAGCTCAGTGAGGTGGAGTCACTCAGGCTGGAGGCCATCTGCGATATCACCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp ACGTCCCACCAGGGTTTGAGCACCTTGAACGCAGGCTaGTGTTCCGTGAACTGCTTGAACTCGGCCACTGGG +
Preference number: 6 (lower is better)
Translates to: TSHQGLSTLNAG*CSVNCLNSATG
Trigger: CCCAGTGGCCGAGTTCAAGCAGTTCACGGAACAGCAGCCTGCGTTCAAGGTGCTCAAACCCTGGTGGGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000618098.4
CDS CCA 72 bp CCAATCTGCTCAGGGATCCCCCGAGGCAGCAATTGCTaGCACGGGGCCTCTGATAAGTTCTCCTGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: PICSGIPRGSNC*HGASDKFSWSS
Trigger: TGAGCTCCAGGAGAACTTATCAGAGGCCCCGTGCCAGCAATTGCTGCCTCGGGGGATCCCTGAGCAGATTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000600345.1
ENST00000618098.4
CDS CCA 72 bp TTGCTCACCCTCCTTCTTGTCCAACAGGGTGACAACTaGAGGCTCGGTCACCACCTTCTCCGGTTCCGCCAG +
Preference number: 6 (lower is better)
Translates to: LLTLLLVQQGDN*RLGHHLLRFRQ
Trigger: CTGGCGGAACCGGAGAAGGTGGTGACCGAGCCTCCAGTTGTCACCCTGTTGGACAAGAAGGAGGGTGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp TTCTTAAGGCCTTTAACCTCCTGCAGGGCCCCAATCTaGTCAGGGATCCCCCGAGGCAGCAATTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: FLRPLTSCRAPI*SGIPRGSNCWH
Trigger: GTGCCAGCAATTGCTGCCTCGGGGGATCCCTGAGCAGATTGGGGCCCTGCAGGAGGTTAAAGGCCTTAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000600345.1
ENST00000618098.4
CDS GCA 72 bp CCAGCTTCATTCCTCCTCCATCTTGTCCCGCACTTCTaGCGGCAGACCCTGGTAAAGCGTGTCTTCCACCAG +
Preference number: 6 (lower is better)
Translates to: PASFLLHLVPHF*RQTLVKRVFHQ
Trigger: CTGGTGGAAGACACGCTTTACCAGGGTCTGCCGGCAGAAGTGCGGGACAAGATGGAGGAGGAATGAAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS GCA 72 bp TGCAGGTCCAAATTGTTCTTAAGGCCTTTAACCTCCTaGAGGGCCCCAATCTGCTCAGGGATCCCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: CRSKLFLRPLTS*RAPICSGIPRG
Trigger: GCCTCGGGGGATCCCTGAGCAGATTGGGGCCCTGCAGGAGGTTAAAGGCCTTAAGAACAATTTGGACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000598224.5
ENST00000599367.1
ENST00000600345.1
ENST00000618098.4
CDS CAA 72 bp CATGAACCTGTAGTCCCAGCTAGGCAGGAGAATCGCTaGAACCCGGGAAGCGGAGGTTGTGGTGAGCTGAGA +
Preference number: 6 (lower is better)
Translates to: HEPVVPARQENR*NPGSGGCGELR
Trigger: TCTCAGCTCACCACAACCTCCGCTTCCCGGGTTCAAGCGATTCTCCTGCCTAGCTGGGACTACAGGTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593511.1
CDS TCA 72 bp CCTCTGACGTCTCCACCCTACAGGCCACCAGGAAACTaGTCTTCTCCACATAGACCAGGTTGTAGACCAGGA +
Preference number: 6 (lower is better)
Translates to: PLTSPPYRPPGN*SSPHRPGCRPG
Trigger: TCCTGGTCTACAACCTGGTCTATGTGGAGAAGATCAGTTTCCTGGTGGCCTGTAGGGTGGAGACGTCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp ATAAGTTCTCCTGGAGCTCATGATTGGGTAGACAGATaGTCTTGTCCTGTGTCACCGTTCCGGGAGGGACGC +
Preference number: 6 (lower is better)
Translates to: ISSPGAHDWVDR*SCPVSPFREGR
Trigger: GCGTCCCTCCCGGAACGGTGACACAGGACAAGATCATCTGTCTACCCAATCATGAGCTCCAGGAGAACTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600345.1
CDS CCA 72 bp ACTTACACACTTTCAGCACCGTCTGTCGGATGTACATaGTGTACAGGATGTCGCCCTCTTCCACGTGCATGC +
Preference number: 6 (lower is better)
Translates to: TYTLSAPSVGCT*CTGCRPLPRAC
Trigger: GCATGCACGTGGAAGAGGGCGACATCCTGTACACCATGTACATCCGACAGACGGTGCTGAAAGTGTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306708.11
ENST00000618098.4
CDS TCA 72 bp ATAAGTTCTCCTGGAGCTCATGATTGGGTAGACAGATaGTCTTGTCCTGTGTCACCTGGAGGGTGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: ISSPGAHDWVDR*SCPVSPGGCSQ
Trigger: TTGGCTGCACCCTCCAGGTGACACAGGACAAGATCATCTGTCTACCCAATCATGAGCTCCAGGAGAACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306708.11
ENST00000593511.1
ENST00000598224.5
ENST00000599367.1
ENST00000618098.4
CDS CAA 72 bp ATGAAGTGTTCAATCTTGGAGCTGGTGCCAGGGAACTaGAACCAGAAACTGGTGCAGACCATGAAGATGAGT +
Preference number: 6 (lower is better)
Translates to: MKCSILELVPGN*NQKLVQTMKMS
Trigger: ACTCATCTTCATGGTCTGCACCAGTTTCTGGTTCAAGTTCCCTGGCACCAGCTCCAAGATTGAACACTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306708.11
ENST00000598224.5
ENST00000600345.1
ENST00000618098.4