RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC8D (Homo sapiens)

Ensembl gene IDs: ENSG00000171492

Ensembl transcript IDs: ENST00000337338.9, ENST00000394593.7, ENST00000414841.1, ENST00000441269.2, ENST00000525774.5, ENST00000527156.1, ENST00000532201.5

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTCTATCAGCCTTCTATaGATCCTCTCTGTTTTATTT +
Preference number: 2 (lower is better)
Translates to: RQAICKHSVAAASKLQTISISLL*ILSVLF
Trigger: AAATAAAACAGAGAGGATGCATAGAAGGCTGATAGA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
3UTR-3UTR GCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTCTATCAGCCTTCTATaGATCCTCTCTGTTTTATTT +
Preference number: 2 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSSISLL*ILSVLF
Trigger: AAATAAAACAGAGAGGATGCATAGAAGGCTGATAGA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
3UTR-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACCTTGTACGTGAGCACTaGCAATCTAGGAAGTTGTTC +
Preference number: 3 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYLVREH*QSRKLF
Trigger: GAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
3UTR-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTGCAATCTAGGAAGTaGTTCCTGCACATCACTGTG +
Preference number: 3 (lower is better)
Translates to: IYFSRQAICKHSVAAASKLQSRK*FLHITV
Trigger: CACAGTGATGTGCAGGAACAACTTCCTAGATTGCAA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
3UTR-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATTGCAATCTAGGAAGTaGTTCCTGCACATCACTGTG +
Preference number: 3 (lower is better)
Translates to: YFSRQAICKHSVAAASKLLQSRK*FLHITV
Trigger: CACAGTGATGTGCAGGAACAACTTCCTAGATTGCAA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
3UTR-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGCTTGTACGTGAGCACTaGCAATCTAGGAAGTTGTTC +
Preference number: 3 (lower is better)
Translates to: IYFSRQAICKHSVAAASKLVREH*QSRKLF
Trigger: GAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGGCGGCGAAGGCGCGCTaGACCCTGGACCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRAAKAR*TLDPAP
Trigger: GGGAGCAGGGTCCAGGGTGCAGCGCGCCTTCGCCGC...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTCGACACTGGCCCAGCTaGGCTGGCAGGCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLRHWPS*AGRRSK
Trigger: CTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCG...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCGACACTGGCCCAGCTaGGCTGGCAGGCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHRHWPS*AGRRSK
Trigger: CTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCTGGCCCAGCTGGGCTaGCAGGCGGTCCAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHLAQLG*QAVQAV
Trigger: AACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACAACAGATGCAACTCCTaGTTGTCCTGGGCGTTGCGT +
Preference number: 4 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYNRCNS*LSWALR
Trigger: ACGCAACGCCCAGGACAAGCAGGAGTTGCATCTGTT...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTCTGGGGACGCGGCTTaGGCGAGCTCCGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKSGDAA*ASSGGW
Trigger: CCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCCCCCTAGTAAAGGGTaGCGGAAAGGAGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHPPSKG*RKGEGP
Trigger: GGGGCCTTCTCCTTTCCGTCACCCTTTACTAGGGGG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTAAGGGTAAACATTCCTaGACCAAGCGGCCACCCTGT +
Preference number: 4 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLKGKHS*TKRPPC
Trigger: ACAGGGTGGCCGCTTGGTCCAGGAATGTTTACCCTT...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAAGCCACGGCTTATGCTaGGGCCGGAGGTGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSSHGLC*GRRWRH
Trigger: ATGCCGCCACCTCCGGCCTCAGCATAAGCCGTGGCT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACAGGGTATCAAAAAGGTaGTCTTCCACAACAAGCCCG +
Preference number: 4 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYRVSKR*SSTTSP
Trigger: CGGGCTTGTTGTGGAAGATCACCTTTTTGATACCCT...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGGATTCAATGCCTCTTTaGCTTCGAGTGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRDSMPL*LRVAGY
Trigger: ATACCCTGCCACTCGAAGTCAAAGAGGCATTGAATC...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGGTCTTGGTTGGTGGCTaGTTCCATCTTTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRVLVGG*FHLWDV
Trigger: AACATCCCAAAGATGGAAGCAGCCACCAACCAAGAC...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTCTCAGGGCGCTCTCTaGGGACGCGGCTTGGGCGAG +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTISQGAL*GRGLGE
Trigger: CTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGTCACTATCTTCCACATaGGCACGGAACTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRSLSST*ARNFLT
Trigger: AGTGAGGAAGTTCCGTGCCCATGTGGAAGATAGTGA...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTGCGAGCTCCGGAGGCTaGAACCACGGCGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGASSGG*NHGDRR
Trigger: TCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGC...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGCGAGCTCCGGAGGCTaGAACCACGGCGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIASSGG*NHGDRR
Trigger: TCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATGTTGTCCGCCCATCTTaGTCTTGGTTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHVVRPS*SWLVAA
Trigger: AGCAGCCACCAACCAAGACCAAGATGGGCGGACAAC...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACAAATTGCTCTTCACGTaGAGAATCTTAAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYKLLFT*RILRCR
Trigger: GCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTT...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATTGAGCATCCGACACTaGCCCAGCTGGGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLLSIRH*PSWAGR
Trigger: CCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACCTCTTTGACTTCGAGTaGCAGGGTATCAAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYLFDFE*QGIKKV
Trigger: CACCTTTTTGATACCCTGCCACTCGAAGTCAAAGAG...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTCTCTGGGAGTGAGGTaGTGCAGTTCTGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHSLGVR*CSSVPD
Trigger: ATCTGGGACAGAACTGCATCACCTCACTCCCAGAGA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACCCCTGGACAGGATTTaGGCAGAAGTCCCGCTCCCA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLPLDRI*AEVPLP
Trigger: TGGGAGCGGGACTTCTGCTCAAATCCTGTCCAGGGG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR GCA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACGCGTTGCGTGAAATGTaGTGCCTGAGTTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYALREM*CLSFSN
Trigger: ATTTGAAAAACTCAGGCAGCACATTTCACGCAACGC...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATGGCTGCTTCCATCTTTaGGATGTTGGTGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHGCFHL*DVGGDL
Trigger: GAGGTCACCACCAACATCCCAAAGATGGAAGCAGCC...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGAGTTTTATTGATCATTaGTGTACTGGCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRSFIDH*CTGTGA
Trigger: AGCCCCAGTGCCAGTACACCAATGATCAATAAAACT...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGAGTAACTGGAGGTGCTaGTCCTCCCGGCAACCACCC +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKSNWRC*SSRQPP
Trigger: GGGTGGTTGCCGGGAGGACCAGCACCTCCAGTTACT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGCAACCCTCCAGTAACTaGAGGTGCTGGTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKQPSSN*RCWSSR
Trigger: CCGGGAGGACCAGCACCTCCAGTTACTGGAGGGTTG...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR TCA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTCCTTCAAAGGTATCCTaGATAACCAGAAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLPSKVS*ITRREC
Trigger: ACACTCTCTTCTGGTTATTCAGGATACCTTTGAAGG...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAGCACCCCCGACAGCATaGACAGATGCAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSAPPTA*TDATPA
Trigger: AGCAGGAGTTGCATCTGTTCATGCTGTCGGGGGTGC...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGCACCCCCGACAGCATaGACAGATGCAACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLAPPTA*TDATPA
Trigger: AGCAGGAGTTGCATCTGTTCATGCTGTCGGGGGTGC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATCAGCTCCAGCTGAGTaGGCTGGGAGAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQSAPAE*AGRADQ
Trigger: TTGGTCAGCTCTCCCAGCTCACTCAGCTGGAGCTGA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGCCCGCTTTTCTTaGGCATCCGACACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLQARFS*ASDTGP
Trigger: TGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATAGTCTGTTCAACTTTTaGAGGGCAGTGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHSLFNF*RAVAEV
Trigger: CACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACT...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTCCAGTAACTGGAGGTaGTGGTCCTCCCGGCAACCA +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKSSNWR*WSSRQP
Trigger: TGGTTGCCGGGAGGACCAGCACCTCCAGTTACTGGA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCAGCCGTGCACTTCCTTaGGGTGCAGCTCGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSSRALP*GAARPP
Trigger: TGGCGGCCGAGCTGCACCCCAAGGAAGTGCACGGCT...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACTGGCCCAGCTGGGCTaGCAGGCGGTCCAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTLAQLG*QAVQAV
Trigger: AACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATTCACTCCTCCATCCTaGGACCCGGCAGCACGTTAT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLFTPPS*DPAARY
Trigger: ATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATTGGGATGTTGGTGGTaGCCTCGGCATTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLLGCWW*PRHFLV
Trigger: CACCAGGAAATGCCGAGGTCACCACCAACATCCCAA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATTGGGATGTTGGTGGTaGCCTCGGCATTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLGCWW*PRHFLV
Trigger: CACCAGGAAATGCCGAGGTCACCACCAACATCCCAA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAGTCCTGGGCGTTGCGTaGAATGTGCTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSVLGVA*NVLPEF
Trigger: AAACTCAGGCAGCACATTTCACGCAACGCCCAGGAC...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTTTCAGCCACATCAGTaGACTTCACGTGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHFQPHQ*TSREGI
Trigger: GATGCCTTCACGTGAAGTTCACTGATGTGGCTGAAA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGTGAGCTGGGAGAGCTaGCCAACTTTCTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLVSWES*PTFSGS
Trigger: ACTCCCAGAGAAAGTTGGTCAGCTCTCCCAGCTCAC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAGTGAGCTGGGAGAGCTaGCCAACTTTCTCTGGGAGT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSVSWES*PTFSGS
Trigger: ACTCCCAGAGAAAGTTGGTCAGCTCTCCCAGCTCAC...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTCAAGCCCGCTTTTCTTaGGCATCCGACACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGQARFS*ASDTGP
Trigger: TGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTG...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCATCTTGGTCTTGGTTaGTGGCTGCTTCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHHLGLG*WLLPSL
Trigger: CAAAGATGGAAGCAGCCACCAACCAAGACCAAGATG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGCGCCCATCTTGGTCTTaGTTGGTGGCTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKRPSWS*LVAASI
Trigger: GATGGAAGCAGCCACCAACCAAGACCAAGATGGGCG...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAACGCCCATCTTGGTCTTaGTTGGTGGCTGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQRPSWS*LVAASI
Trigger: GATGGAAGCAGCCACCAACCAAGACCAAGATGGGCG...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGTTGTCCGCCCATCTTaGTCTTGGTTGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKVVRPS*SWLVAA
Trigger: AGCAGCCACCAACCAAGACCAAGATGGGCGGACAAC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGACTTTTGCAGGGCAGTaGCAGAGGTGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKTFAGQ*QRWSSW
Trigger: CCAAGAGCTCCACCTCTGCCACTGCCCTGCAAAAGT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAAACAGATGCAACTCCTaGTTGTCCTGGGCGTTGCGT +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQNRCNS*LSWALR
Trigger: ACGCAACGCCCAGGACAAGCAGGAGTTGCATCTGTT...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTCTTCCCCTCGACCTaGAGCAGTTCTTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLFPST*SSSSSL
Trigger: CAGTGAAGAAGAACTGCTGCAGGTCGAGGGGAAGAG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACGTTATAGACAGCCGTaGACTTCCTCTCTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSRYRQP*TSSLPL
Trigger: GAGGGGAAGAGAGGAAGTGCACGGCTGTCTATAACG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAAAGGGTAAACATTCCTaGACCAAGCGGCCACCCTGT +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQKGKHS*TKRPPC
Trigger: ACAGGGTGGCCGCTTGGTCCAGGAATGTTTACCCTT...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGGCTGCTTCCATCTTTaGGATGTTGGTGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLGCFHL*DVGGDL
Trigger: GAGGTCACCACCAACATCCCAAAGATGGAAGCAGCC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCGCTTGGAATATAGCTaGTCATACTGGTCTACCATG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHRLEYS*SYWSTM
Trigger: CATGGTAGACCAGTATGACCAGCTATATTCCAAGCG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAAACTCCTGCTTGTCCTaGGCGTTGCGTGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQNSCLS*ALREMC
Trigger: GCACATTTCACGCAACGCCCAGGACAAGCAGGAGTT...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGAGGATATGTGGCTCTaGGAGGTATGTCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLEDMWL*EVCQVS
Trigger: TGACACCTGACATACCTCTCAGAGCCACATATCCTC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGCTTGTTTTCCTCTaGGTCTTCGCATGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLLVFL*VFACCL
Trigger: GAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTCAGCTCCAGCTGAGTaGGCTGGGAGAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSSAPAE*AGRADQ
Trigger: TTGGTCAGCTCTCCCAGCTCACTCAGCTGGAGCTGA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTATCCAGGATTGTCATaGTGGGAACTTCAATCACAG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHYPGLS*WELQSQ
Trigger: CTGTGATTGAAGTTCCCAGCATGACAATCCTGGATA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATGCGTTGCGTGAAATGTaGTGCCTGAGTTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHALREM*CLSFSN
Trigger: ATTTGAAAAACTCAGGCAGCACATTTCACGCAACGC...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAATCTATGACACGAGGTaGTCAGGAGCAGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLIYDTR*SGAAVP
Trigger: TGGTACTGCTGCTCCTGAGCACCTCGTGTCATAGAT...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTAACTCCTGCTTGTCCTaGGCGTTGCGTGAAATGTGC +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGNSCLS*ALREMC
Trigger: GCACATTTCACGCAACGCCCAGGACAAGCAGGAGTT...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTGTTGGAGGGAACTTTaGTCAAATTGCTCTTCACGT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHCWREL*SNCSSR
Trigger: ACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTCTAGCTCACAGTTCTaGAGTTCCAGCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKSSSQF*SSSSAT
Trigger: TGTCGCTGAGCTGGAACTCCAGAACTGTGAGCTAGA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGGCAAACAGACCACCTaGTCTTTGGTAAGTTGCATG +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQGKQTT*SLVSCM
Trigger: CATGCAACTTACCAAAGATCAGGTGGTCTGTTTGCC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGAGGATATGTGGCTCTaGGAGGTATGTCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIEDMWL*EVCQVS
Trigger: TGACACCTGACATACCTCTCAGAGCCACATATCCTC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCGTCCTGGGCGTTGCGTaGAATGTGCTGCCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSVLGVA*NVLPEF
Trigger: AAACTCAGGCAGCACATTTCACGCAACGCCCAGGAC...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTTCAGCCACATCAGTaGACTTCACGTGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKFQPHQ*TSREGI
Trigger: GATGCCTTCACGTGAAGTTCACTGATGTGGCTGAAA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGAGGGTATCAAAAAGGTaGTCTTCCACAACAAGCCCG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKRVSKR*SSTTSP
Trigger: CGGGCTTGTTGTGGAAGATCACCTTTTTGATACCCT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGATTCAATGCCTCTTTaGCTTCGAGTGGCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLDSMPL*LRVAGY
Trigger: ATACCCTGCCACTCGAAGTCAAAGAGGCATTGAATC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGTTATAGACAGCCGTaGACTTCCTTGGGGTGCAGC +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTRYRQP*TSLGCS
Trigger: GCTGCACCCCAAGGAAGTGCACGGCTGTCTATAACG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATAAGCCATATTGTGGGTaGACTCAAATACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHKPYCG*TQIPHN
Trigger: GTTATGAGGTATTTGAGTGCACCCACAATATGGCTT...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAGTCTGTTCAACTTTTaGAGGGCAGTGGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTISLFNF*RAVAEV
Trigger: CACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATGAACTTTGGTCAAATTaGTCTTCACGTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHELWSN*SSRGES
Trigger: AGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTC...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGAGGAGATGGCAATACTaGCAAACAGACCACCTGATC +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKRRWQY*QTDHLI
Trigger: GATCAGGTGGTCTGTTTGCCAGTATTGCCATCTCCT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAAGGAGATGGCAATACTaGCAAACAGACCACCTGATC +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLRRWQY*QTDHLI
Trigger: GATCAGGTGGTCTGTTTGCCAGTATTGCCATCTCCT...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACATCTTGGTCTTGGTTaGTGGCTGCTTCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLHLGLG*WLLPSL
Trigger: CAAAGATGGAAGCAGCCACCAACCAAGACCAAGATG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGCTTTGCCTCCTGATTTaGAAGTGCGAAATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKLCLLI*KCEICA
Trigger: CGCACAGATTTCGCACTTCCAAATCAGGAGGCAAAG...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTTTGCCTCCTGATTTaGAAGTGCGAAATCTGTGCG +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLCLLI*KCEICA
Trigger: CGCACAGATTTCGCACTTCCAAATCAGGAGGCAAAG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACCAGGATTGTCATGCTaGGAACTTCAATCACAGGCT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSPGLSC*ELQSQA
Trigger: AGCCTGTGATTGAAGTTCCCAGCATGACAATCCTGG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAACCAGGATTGTCATGCTaGGAACTTCAATCACAGGCT +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQPGLSC*ELQSQA
Trigger: AGCCTGTGATTGAAGTTCCCAGCATGACAATCCTGG...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACAACTTTTGCAGGGCAGTaGCAGAGGTGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTTFAGQ*QRWSSW
Trigger: CCAAGAGCTCCACCTCTGCCACTGCCCTGCAAAAGT...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKLNVIK*CNFRKG
Trigger: ACCCTTGCGGAAGTTGCATCACTTAATGACATTCAG...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATACTGGTCTACCATGTaGAGAAGGAACGCAAAATCG +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSYWSTM*RRNAKS
Trigger: CGATTTTGCGTTCCTTCTTCACATGGTAGACCAGTA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATACTGGTCTACCATGTaGAGAAGGAACGCAAAATCG +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLYWSTM*RRNAKS
Trigger: CGATTTTGCGTTCCTTCTTCACATGGTAGACCAGTA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATATTTTCACTAACTTCTaGCAAGAACACACCAAAACG +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHIFTNF*QEHTKT
Trigger: CGTTTTGGTGTGTTCTTGTCAGAAGTTAGTGAAAAT...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTACTCTCGAAGGTTTTTaGGCAAATACACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGTLEGF*ANTPRQ
Trigger: CTGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGT...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTACTCTCGAAGGTTTTTaGGCAAATACACCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTITLEGF*ANTPRQ
Trigger: CTGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTCTCTGGGAGTGAGGTaGTGCAGTTCTGTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSSLGVR*CSSVPD
Trigger: ATCTGGGACAGAACTGCATCACCTCACTCCCAGAGA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGTCTTGGTTGGTGGCTaGTTCCATCTTTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIVLVGG*FHLWDV
Trigger: AACATCCCAAAGATGGAAGCAGCCACCAACCAAGAC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACTCCTGATTTGGAAGTaGGAAATCTGTGCGAGGATA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLLLIWK*EICARI
Trigger: TATCCTCGCACAGATTTCGCACTTCCAAATCAGGAG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTCTGCTGGTAGAAACATaGTTTGGTAGAGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGLLVET*FGRVWA
Trigger: TGCCCAGACTCTACCAAAGCATGTTTCTACCAGCAG...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCTGCTGGTAGAAACATaGTTTGGTAGAGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTILLVET*FGRVWA
Trigger: TGCCCAGACTCTACCAAAGCATGTTTCTACCAGCAG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTGGAGAATCTTAAGGTaGCGCAACTCTCGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIWRILR*RNSRRD
Trigger: ATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTCACTATCTTCCACATaGGCACGGAACTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTISLSST*ARNFLT
Trigger: AGTGAGGAAGTTCCGTGCCCATGTGGAAGATAGTGA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATCAGATGCTCAACTTTaGGCTTGCAGACGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQSDAQL*ACRRVQ
Trigger: TTGAACACGTCTGCAAGCCCAAAGTTGAGCATCTGA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTCCAAGTTTTTGACATaGGTAATAGAGGGAGGAATA +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHSKFLT*VIEGGI
Trigger: TATTCCTCCCTCTATTACCCATGTCAAAAACTTGGA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACTCTTTGACTTCGAGTaGCAGGGTATCAAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLLFDFE*QGIKKV
Trigger: CACCTTTTTGATACCCTGCCACTCGAAGTCAAAGAG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATGGTGTATGTGCCTTTaGATTTACAGGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLWCMCL*IYRRWQ
Trigger: TTGCCATCTCCTGTAAATTCAAAGGCACATACACCA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATCTTTCTTTGCCTCCTaGTTTGGAAGTGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSSFFAS*FGSAKS
Trigger: AGATTTCGCACTTCCAAATCAGGAGGCAAAGAAAGA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCCTGCTTGTTTTCCTCTaGGTCTTCGCATGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSLLVFL*VFACCL
Trigger: GAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAG...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAACCTTCAAAGGTATCCTaGATAACCAGAAGAGAGTGT +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQPSKVS*ITRREC
Trigger: ACACTCTCTTCTGGTTATTCAGGATACCTTTGAAGG...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGTGAAATGTGCTGCCTaGGTTTTTCAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQVKCAA*VFQMST
Trigger: AGTGGACATTTGAAAAACTCAGGCAGCACATTTCAC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGCACCTGTTATTCTCTaGTTGTTTTCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKAPVIL*LFSSES
Trigger: AGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGCACCTGTTATTCTCTaGTTGTTTTCCTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLAPVIL*LFSSES
Trigger: AGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTATCCAGGATTGTCATaGTGGGAACTTCAATCACAG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKYPGLS*WELQSQ
Trigger: CTGTGATTGAAGTTCCCAGCATGACAATCCTGGATA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAGTGTTCAAAGCTGATTaGGTTGACAAAGTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSVFKAD*VDKVRC
Trigger: ACAGCGAACTTTGTCAACGCAATCAGCTTTGAACAC...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTTCAGATGCTCAACTTTaGGCTTGCAGACGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGSDAQL*ACRRVQ
Trigger: TTGAACACGTCTGCAAGCCCAAAGTTGAGCATCTGA...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATATCGTTTTTGACATCTaGAATGTCACTAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHIVFDI*NVTKTA
Trigger: AGCAGTTTTAGTGACATTCCAGATGTCAAAAACGAT...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAAATTGCTCTTCACGTaGAGAATCTTAAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIKLLFT*RILRCR
Trigger: GCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTGTTGGAGGGAACTTTaGTCAAATTGCTCTTCACGT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKCWREL*SNCSSR
Trigger: ACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACATCTAGCTCACAGTTCTaGAGTTCCAGCTCAGCGACA +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTSSSQF*SSSSAT
Trigger: TGTCGCTGAGCTGGAACTCCAGAACTGTGAGCTAGA...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCTTCTTCACTGCAGCTaGCTTTTTAAGAAATCAAAA +
Preference number: 4 (lower is better)
Translates to: LVREHLQSRKLFLHITVHLLHCS*LFKKSK
Trigger: TTTTGATTTCTTAAAAAGCCAGCTGCAGTGAAGAAG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR TCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACACAGGCTTCTCAGCTaGAAATTTAAAGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLHRLLS*KFKASF
Trigger: AAAACTGGCTTTAAATTTTCAGCTGAGAAGCCTGTG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAAAGCCATATTGTGGGTaGACTCAAATACCTCATAAC +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSKPYCG*TQIPHN
Trigger: GTTATGAGGTATTTGAGTGCACCCACAATATGGCTT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTGGAGAATCTTAAGGTaGCGCAACTCTCGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSWRILR*RNSRRD
Trigger: ATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR GCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGAACTTTGGTCAAATTaGTCTTCACGTGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKELWSN*SSRGES
Trigger: AGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGCAGTTCTTCTTCACTaGAGCTGGCTTTTTAAGAAA +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQAVLLH*SWLFKK
Trigger: TTTCTTAAAAAGCCAGCTGCAGTGAAGAAGAACTGC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAGTTTTATTGATCATTaGTGTACTGGCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTISFIDH*CTGTGA
Trigger: AGCCCCAGTGCCAGTACACCAATGATCAATAAAACT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSLNVIK*CNFRKG
Trigger: ACCCTTGCGGAAGTTGCATCACTTAATGACATTCAG...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGATTTTCACTAACTTCTaGCAAGAACACACCAAAACG +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKIFTNF*QEHTKT
Trigger: CGTTTTGGTGTGTTCTTGTCAGAAGTTAGTGAAAAT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATGGAGGTTAGTCATTTaGGAAATCTTAGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSWRLVI*EILAGI
Trigger: AATTCCTGCTAAGATTTCTCAAATGACTAACCTCCA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGAAATGCTGCAGGTTCTaGAGCAATCCTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKKCCRF*SNPISI
Trigger: AATAGAAATAGGATTGCTTCAGAACCTGCAGCATTT...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGTCAGTCGTTTTAAATaGTGGAAACTGATGATTTCC +
Preference number: 4 (lower is better)
Translates to: FSRQAICKHSVAAASKLQVSRFK*WKLMIS
Trigger: GGAAATCATCAGTTTCCAGCATTTAAAACGACTGAC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAAAAATCTCATTTATCTaGAAGGGATACCCCCTAGTA +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSKISFI*KGYPLV
Trigger: TACTAGGGGGTATCCCTTGCAGATAAATGAGATTTT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS-3UTR CCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGCTTGGAATATAGCTaGTCATACTGGTCTACCATG +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTRLEYS*SYWSTM
Trigger: CATGGTAGACCAGTATGACCAGCTATATTCCAAGCG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATCCAAGTTTTTGACATaGGTAATAGAGGGAGGAATA +
Preference number: 4 (lower is better)
Translates to: YFSRQAICKHSVAAASKLSKFLT*VIEGGI
Trigger: TATTCCTCCCTCTATTACCCATGTCAAAAACTTGGA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTGGTGTATGTGCCTTTaGATTTACAGGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSWCMCL*IYRRWQ
Trigger: TTGCCATCTCCTGTAAATTCAAAGGCACATACACCA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACATCTTTCTTTGCCTCCTaGTTTGGAAGTGCGAAATCT +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTSFFAS*FGSAKS
Trigger: AGATTTCGCACTTCCAAATCAGGAGGCAAAGAAAGA...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACAGTGAAATGTGCTGCCTaGGTTTTTCAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTVKCAA*VFQMST
Trigger: AGTGGACATTTGAAAAACTCAGGCAGCACATTTCAC...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTTGGAGGTTAGTCATTTaGGAAATCTTAGCAGGAATT +
Preference number: 4 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGWRLVI*EILAGI
Trigger: AATTCCTGCTAAGATTTCTCAAATGACTAACCTCCA...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR TCA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAAATGCTGCAGGTTCTaGAGCAATCCTATTTCTATT +
Preference number: 4 (lower is better)
Translates to: RQAICKHSVAAASKLQTIKCCRF*SNPISI
Trigger: AATAGAAATAGGATTGCTTCAGAACCTGCAGCATTT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR GCA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATCTATCAGCCTTCTATaGATCCTCTCTGTTTTATTT +
Preference number: 4 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSSISLL*ILSVLF
Trigger: AAATAAAACAGAGAGGATGCATAGAAGGCTGATAGA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CCA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTCAAATGTCCACTCATaGTTCAAACTAATTTCCCTA +
Preference number: 4 (lower is better)
Translates to: IYFSRQAICKHSVAAASKSNVHS*FKLISL
Trigger: TAGGGAAATTAGTTTGAACCATGAGTGGACATTTGA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR TCA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACACAGGCTTCTCAGCTaGAAATTTAAAGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTHRLLS*KFKASF
Trigger: AAAACTGGCTTTAAATTTTCAGCTGAGAAGCCTGTG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CCA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCATCGTTTTTGACATCTaGAATGTCACTAAAACTGCT +
Preference number: 4 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSIVFDI*NVTKTA
Trigger: AGCAGTTTTAGTGACATTCCAGATGTCAAAAACGAT...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS GCA 90 bp ATGCTGAGGCCGGAGGTGGCGGCATCACCCGCGGCGGGCGGCGGCTaGACCGGGACGCGCCGGGGCGGCGAAGGCGCGCTGCACCCTGGA +
Preference number: 5 (lower is better)
Translates to: MLRPEVAASPAAGGG*TGTRRGGEGALHPG
Trigger: TCCAGGGTGCAGCGCGCCTTCGCCGCCCCGGCGCGTCCCGGTGCAGCCGCCGCCCGCCGCGGGTGATGCCGCCACCTCCGGCCTCAGCAT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000525774.5
CDS CCA 90 bp GGACTCCTGGACCAAGCGGCCACCCTGTTCTCTCAGGGCGCTCTCTaGGGACGCGGCTTGGGCGAGCTCCGGAGGCTGGAACCACGGCGA +
Preference number: 5 (lower is better)
Translates to: GLLDQAATLFSQGAL*GRGLGELRRLEPRR
Trigger: TCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGTGGCCGCTTGGTCCAGGAGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525774.5
CDS CCA 90 bp CTCAGGGCGCTCTCTGGGGACGCGGCTTGGGCGAGCTCCGGAGGCTaGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTGAGACCC +
Preference number: 5 (lower is better)
Translates to: LRALSGDAAWASSGG*NHGDRRLHSSILRP
Trigger: GGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CCA 90 bp AAGCGGCCACCCTGTTCTCTCAGGGCGCTCTCTGGGGACGCGGCTTaGGCGAGCTCCGGAGGCTGGAACCACGGCGACAGGAGACTTCAC +
Preference number: 5 (lower is better)
Translates to: KRPPCSLRALSGDAA*ASSGGWNHGDRRLH
Trigger: GTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGTGGCCGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CCA 90 bp ACATTCCTGGACCAAGCGGCCACCCTGTTCTCTCAGGGCGCTCTCTaGGGACGCGGCTTGGGCGAGCTCCGGAGGCTGGAACCACGGCGA +
Preference number: 5 (lower is better)
Translates to: TFLDQAATLFSQGAL*GRGLGELRRLEPRR
Trigger: TCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGTGGCCGCTTGGTCCAGGAATGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000527156.1
ENST00000532201.5
CDS TCA 90 bp CCGGAGGCTGGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PEAGTTATGDFTPPS*DPAARYRQPCTSSG
Trigger: CCCCGAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414841.1
CDS TCA 90 bp CCGGAGGCTGGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTTGGGG +
Preference number: 5 (lower is better)
Translates to: PEAGTTATGDFTPPS*DPAARYRQPCTSLG
Trigger: CCCCAAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000525774.5
CDS TCA 90 bp CCGGAGGCTGGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTCACCA +
Preference number: 5 (lower is better)
Translates to: PEAGTTATGDFTPPS*DPAARYRQPCTSSP
Trigger: TGGTGAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532201.5
CDS CCA 90 bp AACAAGCCCGCTTTTCTTGAGCATCCGACACTGGCCCAGCTGGGCTaGCAGGCGGTCCAAGCAGTTCCCCTTCAGCTCCAGCTGAGTGAG +
Preference number: 5 (lower is better)
Translates to: NKPAFLEHPTLAQLG*QAVQAVPLQLQLSE
Trigger: CTCACTCAGCTGGAGCTGAAGGGGAACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTCTCTGGGGACGCGGCTaGGGCGAGCTCCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLLWGRG*GELRRL
Trigger: CAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAG...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS TCA 90 bp CCGGAGGCTGGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: PEAGTTATGDFTPPS*DPAARYRQPCTSSL
Trigger: AAGAGAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS TCA 90 bp CCGGAGGCTGGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: PEAGTTATGDFTPPS*DPAARYRQPCTSCL
Trigger: CAAACAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527156.1
CDS TCA 90 bp GCAGGGTATCAAAAAGGTGATCTTCCACAACAAGCCCGCTTTTCTTaGGCATCCGACACTGGCCCAGCTGGGCTGGCAGGCGGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: AGYQKGDLPQQARFS*ASDTGPAGLAGGPS
Trigger: GCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGTTGTGGAAGATCACCTTTTTGATACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTGCTTGTCCTGGGCGTaGCGTGAAATGTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYCLSWA*REMCCL
Trigger: CAGGCAGCACATTTCACGCAACGCCCAGGACAAGCA...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS CCA 90 bp TGTTGTCCGCCCATCTTGGTCTTGGTTGGTGGCTGCTTCCATCTTTaGGATGTTGGTGGTGACCTCGGCATTTCCTGGTGGTGTATGTGC +
Preference number: 5 (lower is better)
Translates to: CCPPILVLVGGCFHL*DVGGDLGISWWCMC
Trigger: GCACATACACCACCAGGAAATGCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTCTGGGGACGCGGCTaGGGCGAGCTCCGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLWGRG*GELRRL
Trigger: CAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 90 bp CCTGAGACCCGGCAGCACGTTATAGACAGCCGTGCACTTCCTGTTTaGAAACACAGGGGAGAGAAAGAGCTAGAGAGATCCAAGTGTCGG +
Preference number: 5 (lower is better)
Translates to: PETRQHVIDSRALPV*KHRGEKELERSKCR
Trigger: CCGACACTTGGATCTCTCTAGCTCTTTCTCTCCCCTGTGTTTTCAAACAGGAAGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527156.1
CDS GCA 90 bp GGAAATGTCGTTTGTTGTCCGCCCATCTTGGTCTTGGTTGGTGGCTaGTTCCATCTTTGGGATGTTGGTGGTGACCTCGGCATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GNVVCCPPILVLVGG*FHLWDVGGDLGISW
Trigger: CCAGGAAATGCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAGCCGTGCACTTCCTaGGGGTGCAGCTCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLQPCTS*GCSSAA
Trigger: GGCGGCCGAGCTGCACCCCAAGGAAGTGCACGGCTG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS CCA 90 bp GATGTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTTGGTCTTaGTTGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGTGACCTCG +
Preference number: 5 (lower is better)
Translates to: DVPKEMSFVVRPSWS*LVAASIFGMLVVTS
Trigger: CGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS GCA 90 bp GGTGTACTGGCACTGGGGCTCCCTTCATCACTGCTGGTAGAAACATaGTTTGGTAGAGTCTGGGCACCTGTTATTCTCTGCTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GVLALGLPSSLLVET*FGRVWAPVILCLFS
Trigger: GGAAAACAAGCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGTTTCTACCAGCAGTGATGAAGGGAGCCCCAGTGCCAGTACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS CCA 90 bp ACAGCAGATGTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTTaGTCTTGGTTGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TADVPKEMSFVVRPS*SWLVAASIFGMLVV
Trigger: CACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACATCAGATGCTCAACTTaGGGCTTGCAGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYIRCST*GLQTCS
Trigger: TGAACACGTCTGCAAGCCCAAAGTTGAGCATCTGAT...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS TCA 90 bp CTTGGTCTTGGTTGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGTaGCCTCGGCATTTCCTGGTGGTGTATGTGCCTTTGAATTTACAG +
Preference number: 5 (lower is better)
Translates to: LGLGWWLLPSLGCWW*PRHFLVVYVPLNLQ
Trigger: CTGTAAATTCAAAGGCACATACACCACCAGGAAATGCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 90 bp CTCCAGCTGAGTGAGCTGGGAGAGCTGACCAACTTTCTCTGGGAGTaGGGTGATGCAGTTCTGTCCCAGATTCAAAGTCCTCAACTTTAT +
Preference number: 5 (lower is better)
Translates to: LQLSELGELTNFLWE*GDAVLSQIQSPQLY
Trigger: ATAAAGTTGAGGACTTTGAATCTGGGACAGAACTGCATCACCTCACTCCCAGAGAAAGTTGGTCAGCTCTCCCAGCTCACTCAGCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACCCTGTTATTCTCTGCTaGTTTTCCTCTGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYPVILC*FSSESS
Trigger: CGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGG...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp GGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTGAGGGCCACATCTGTAATGTaGGAGGGAACTTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: GAQEQQYQSTVVRGAYLRATSVM*EGTLVK
Trigger: TTTGACCAAAGTTCCCTCCAACATTACAGATGTGGC...CCTCAAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGCCCCTGGACAGGATTaGAGCAGAAGTCCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQAPGQD*SRSPAP
Trigger: GGGAGCGGGACTTCTGCTCAAATCCTGTCCAGGGGC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS TCA 90 bp CCACCATGGTTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTGGACCAAGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PPWFQDSVSWLNVIK*CNFRKGKHSWTKRP
Trigger: TGGCCGCTTGGTCCAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAACCATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000527156.1
ENST00000532201.5
CDS TCA 90 bp GATGTTGGTGGTGACCTCGGCATTTCCTGGTGGTGTATGTGCCTTTaGATTTACAGGAGATGGCAATACTGGCAAACAGACCACCTGATC +
Preference number: 5 (lower is better)
Translates to: DVGGDLGISWWCMCL*IYRRWQYWQTDHLI
Trigger: GATCAGGTGGTCTGTTTGCCAGTATTGCCATCTCCTGTAAATTCAAAGGCACATACACCACCAGGAAATGCCGAGGTCACCACCAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 90 bp CCTCCTGATTTGGAAGTGCGAAATCTGTGCGAGGATATGTGGCTCTaGGAGGTATGTCAGGTGTCACAGCAGATGTCCCAAAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: PPDLEVRNLCEDMWL*EVCQVSQQMSQRKC
Trigger: ACATTTCCTTTGGGACATCTGCTGTGACACCTGACATACCTCTCAGAGCCACATATCCTCGCACAGATTTCGCACTTCCAAATCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
ENST00000527156.1
CDS-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACCCTTTTTATCCAGGATaGTCATGCTGGGAACTTCAA +
Preference number: 5 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYPFYPG*SCWELQ
Trigger: TTGAAGTTCCCAGCATGACAATCCTGGATAAAAAGG...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTAACTCTCGAAGGTTTTaGAGCAAATACACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLNSRRF*SKYTQA
Trigger: TGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGTT...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTCTTGTACGTGAGCACTaGCAATCTAGGAAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLLVREH*QSRKLF
Trigger: GAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS TCA 90 bp CCACCATGGTTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTACTGCCGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: PPWFQDSVSWLNVIK*CNFRKGKHSYCREA
Trigger: GGCTTCACGGCAGTAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAACCATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525774.5
CDS GCA 90 bp CTGGTAGAAACATGCTTTGGTAGAGTCTGGGCACCTGTTATTCTCTaGTTGTTTTCCTCTGAGTCTTCGCATGCTGTCTCAGACAACGCT +
Preference number: 5 (lower is better)
Translates to: LVETCFGRVWAPVIL*LFSSESSHAVSDNA
Trigger: AGCGTTGTCTGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGTTTCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS GCA 90 bp TCTCAAGTGATCGCGAAGAAAGCTAAAAGCAGTCTGTTCAACTTTTaGAGGGCAGTGGCAGAGGTGGAGCTCTTGGAGGTTAGTCATTTG +
Preference number: 5 (lower is better)
Translates to: SQVIAKKAKSSLFNF*RAVAEVELLEVSHL
Trigger: CAAATGACTAACCTCCAAGAGCTCCACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACTGCTTTTAGCTTTCTTCGCGATCACTTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAACCGCCCATCTTGGTCTaGGTTGGTGGCTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQPPILV*VGGCFH
Trigger: ATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGG...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATGTTGTCCGCCCATCTaGGTCTTGGTTGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQCCPPI*VLVGGC
Trigger: GCAGCCACCAACCAAGACCAAGATGGGCGGACAACA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACATGAACTTGGCTGTTTaGATAACTGTTTGGACCACA +
Preference number: 5 (lower is better)
Translates to: TRGAQEQQYQSTVVRGAYMNLAV*ITVWTT
Trigger: TGTGGTCCAAACAGTTATCAAAACAGCCAAGTTCAT...GTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTGCTTGTCCTGGGCGTaGCGTGAAATGTGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: IYFSRQAICKHSVAAASKCLSWA*REMCCL
Trigger: CAGGCAGCACATTTCACGCAACGCCCAGGACAAGCA...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTAGTGACTCCAAGTTTTaGACATGGGTAATAGAGGGA +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLSDSKF*TWVIEG
Trigger: TCCCTCTATTACCCATGTCAAAAACTTGGAGTCACT...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAACAAGCCCGCTTTTCTaGAGCATCCGACACTGGCCC +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSTSPLF*SIRHWP
Trigger: GGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 90 bp CCACCATGGTTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTTGAGTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PPWFQDSVSWLNVIK*CNFRKGKHSLSSGQ
Trigger: CTGCCCAGAACTCAAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAACCATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441269.2
CDS-3UTR CAA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTTGTTGTCCGCCCATCTaGGTCTTGGTTGGTGGCTGC +
Preference number: 5 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGCCPPI*VLVGGC
Trigger: GCAGCCACCAACCAAGACCAAGATGGGCGGACAACA...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATCAAAGGAAATGTCGTTaGTTGTCCGCCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: LVREHLQSRKLFLHITVHQRKCR*LSAHLG
Trigger: ACCAAGATGGGCGGACAACAAACGACATTTCCTTTG...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTCTCAGACAACGCTTTaGTCGTCCAAGGGGATTCAA +
Preference number: 5 (lower is better)
Translates to: LVREHLQSRKLFLHITVHSQTTL*SSKGIQ
Trigger: TTGAATCCCCTTGGACGACAAAAGCGTTGTCTGAGA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAAGATGCAACTCCTGCTaGTCCTGGGCGTTGCGTGAA +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLRCNSC*SWALRE
Trigger: TTCACGCAACGCCCAGGACAAGCAGGAGTTGCATCT...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTACAAGCCCGCTTTTCTaGAGCATCCGACACTGGCCC +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTITSPLF*SIRHWP
Trigger: GGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 90 bp AACAGATGCAACTCCTGCTTGTCCTGGGCGTTGCGTGAAATGTGCTaGCTGAGTTTTTCAAATGTCCACTCATGGTTCAAACTAATTTCC +
Preference number: 5 (lower is better)
Translates to: NRCNSCLSWALREMC*LSFSNVHSWFKLIS
Trigger: GGAAATTAGTTTGAACCATGAGTGGACATTTGAAAAACTCAGGCAGCACATTTCACGCAACGCCCAGGACAAGCAGGAGTTGCATCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CCA 90 bp ACATCTGTAATGTTGGAGGGAACTTTGGTCAAATTGCTCTTCACGTaGAGAATCTTAAGGTGCCGCAACTCTCGGAGAGATTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TSVMLEGTLVKLLFT*RILRCRNSRRDSSP
Trigger: AGGACTTGAATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTTTAAAGCCAGTTTTATaGATCATTGGTGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLLKPVL*IIGVLA
Trigger: TGCCAGTACACCAATGATCAATAAAACTGGCTTTAA...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp ACGAGGTGCTCAGGAGCAGCAGTACCAGTCAACTGTTGTGAGAGGTGCTTACTTAACGCAAAATCGTTTTaGACATCTGGAATGTCACTA +
Preference number: 5 (lower is better)
Translates to: TRCSGAAVPVNCCERCLLNAKSF*TSGMSL
Trigger: TAGTGACATTCCAGATGTCAAAAACGATTTTGCGTT...AAGTAAGCACCTCTCACAACAGTTGACTGGTACTGCTGCTCCTGAGCACCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAGATGCAACTCCTGCTaGTCCTGGGCGTTGCGTGAA +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIRCNSC*SWALRE
Trigger: TTCACGCAACGCCCAGGACAAGCAGGAGTTGCATCT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAGTCTGTTCAACTTTaGCAGGGCAGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLQSVQL*QGSGRG
Trigger: ACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACTG...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 90 bp GCCTTTGAATTTACAGGAGATGGCAATACTGGCAAACAGACCACCTaGTCTTTGGTAAGTTGCATGGTTCCTGCAAAGATGGCTACCATT +
Preference number: 5 (lower is better)
Translates to: AFEFTGDGNTGKQTT*SLVSCMVPAKMATI
Trigger: AATGGTAGCCATCTTTGCAGGAACCATGCAACTTACCAAAGATCAGGTGGTCTGTTTGCCAGTATTGCCATCTCCTGTAAATTCAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 90 bp TTTGCAGGGCAGTGGCAGAGGTGGAGCTCTTGGAGGTTAGTCATTTaGGAAATCTTAGCAGGAATTTTAGCTTCTGGAATTAGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: FAGQWQRWSSWRLVI*EILAGILASGISSS
Trigger: GCTTGAACTAATTCCAGAAGCTAAAATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGCCACTGCCCTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 90 bp ATGAACAGATGCAACTCCTGCTTGTCCTGGGCGTTGCGTGAAATGTaGTGCCTGAGTTTTTCAAATGTCCACTCATGGTTCAAACTAATT +
Preference number: 5 (lower is better)
Translates to: MNRCNSCLSWALREM*CLSFSNVHSWFKLI
Trigger: AATTAGTTTGAACCATGAGTGGACATTTGAAAAACTCAGGCAGCACATTTCACGCAACGCCCAGGACAAGCAGGAGTTGCATCTGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATCCATCTTTGGGATGTaGGTGGTGACCTCGGCATTT +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQSIFGM*VVTSAF
Trigger: AAATGCCGAGGTCACCACCAACATCCCAAAGATGGA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTATGCTCAACTTTGGGCTaGCAGACGTGTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLCSTLG*QTCSKL
Trigger: CAGCTTTGAACACGTCTGCAAGCCCAAAGTTGAGCA...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGCAGAGGTGGAGCTCTaGGAGGTTAGTCATTTGAGA +
Preference number: 5 (lower is better)
Translates to: IYFSRQAICKHSVAAASKAEVEL*EVSHLR
Trigger: TCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCAGTCTGTTCAACTTTaGCAGGGCAGTGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIQSVQL*QGSGRG
Trigger: ACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACTG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 90 bp GAGGGAACTTTGGTCAAATTGCTCTTCACGTGGAGAATCTTAAGGTaGCGCAACTCTCGGAGAGATTCAAGTCCTATCATCTTATTGTTT +
Preference number: 5 (lower is better)
Translates to: EGTLVKLLFTWRILR*RNSRRDSSPIILLF
Trigger: AAACAATAAGATGATAGGACTTGAATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTCCATCTTTGGGATGTaGGTGGTGACCTCGGCATTT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTISIFGM*VVTSAF
Trigger: AAATGCCGAGGTCACCACCAACATCCCAAAGATGGA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCCATCTTGGTCTTGGTaGGTGGCTGCTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIPSWSW*VAASIF
Trigger: AAAGATGGAAGCAGCCACCAACCAAGACCAAGATGG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAAGGAAATGTCGTTTGTaGTCCGCCCATCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLRKCRL*SAHLGL
Trigger: AAGACCAAGATGGGCGGACAACAAACGACATTTCCT...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAAGGAAATGTCGTTTGTaGTCCGCCCATCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSRKCRL*SAHLGL
Trigger: AAGACCAAGATGGGCGGACAACAAACGACATTTCCT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAACAAAGGAAATGTCGTTaGTTGTCCGCCCATCTTGGT +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQQRKCR*LSAHLG
Trigger: ACCAAGATGGGCGGACAACAAACGACATTTCCTTTG...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATCTTTGCCTCCTGATTaGGAAGTGCGAAATCTGTGC +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSSLPPD*EVRNLC
Trigger: GCACAGATTTCGCACTTCCAAATCAGGAGGCAAAGA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAATCAGATGCTCAACTTaGGGCTTGCAGACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSIRCST*GLQTCS
Trigger: TGAACACGTCTGCAAGCCCAAAGTTGAGCATCTGAT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGCAGAGGTGGAGCTCTaGGAGGTTAGTCATTTGAGA +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIAEVEL*EVSHLR
Trigger: TCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp CTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACTGTGCATTTGGAGGTTAGTCATTaGAGAAATCTTAGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LVREHLQSRKLFLHITVHLEVSH*RNLSRN
Trigger: ATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAA...ATGCACAGTGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGGAACTTTGGTCAAATaGCTCTTCACGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLGTLVK*LFTWRI
Trigger: GATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGCCACATCTGTAATGTaGGAGGGAACTTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: IYFSRQAICKHSVAAASKATSVM*EGTLVK
Trigger: TTTGACCAAAGTTCCCTCCAACATTACAGATGTGGC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGGCAGAATGTCCACTTaGTTCCCAGTGATATGCAAA +
Preference number: 5 (lower is better)
Translates to: IYFSRQAICKHSVAAASKGRMST*FPVICK
Trigger: TTTGCATATCACTGGGAACAAAGTGGACATTCTGCC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTAGGCAGAATGTCCACTTaGTTCCCAGTGATATGCAAA +
Preference number: 5 (lower is better)
Translates to: YFSRQAICKHSVAAASKLGRMST*FPVICK
Trigger: TTTGCATATCACTGGGAACAAAGTGGACATTCTGCC...TAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATTGCAATCTAGGAAGTaGTTCCTGCACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQLQSRK*FLHITV
Trigger: CACAGTGATGTGCAGGAACAACTTCCTAGATTGCAA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 90 bp ATCCAGGATTGTCATGCTGGGAACTTCAATCACAGGCTTCTCAGCTaGAAATTTAAAGCCAGTTTTATTGATCATTGGTGTACTGGCACT +
Preference number: 5 (lower is better)
Translates to: IQDCHAGNFNHRLLS*KFKASFIDHWCTGT
Trigger: AGTGCCAGTACACCAATGATCAATAAAACTGGCTTTAAATTTTCAGCTGAGAAGCCTGTGATTGAAGTTCCCAGCATGACAATCCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGTGGTGTATGTGCCTTaGAATTTACAGGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIVVYVP*NLQEMA
Trigger: TGCCATCTCCTGTAAATTCAAAGGCACATACACCAC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACCATCTTGGTCTTGGTaGGTGGCTGCTTCCATCTTT +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTPSWSW*VAASIF
Trigger: AAAGATGGAAGCAGCCACCAACCAAGACCAAGATGG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCCTGTTATTCTCTGCTaGTTTTCCTCTGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIPVILC*FSSESS
Trigger: CGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCACCTTTTTATCCAGGATaGTCATGCTGGGAACTTCAA +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSPFYPG*SCWELQ
Trigger: TTGAAGTTCCCAGCATGACAATCCTGGATAAAAAGG...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACATGCTCAACTTTGGGCTaGCAGACGTGTTCAAAGCTG +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTCSTLG*QTCSKL
Trigger: CAGCTTTGAACACGTCTGCAAGCCCAAAGTTGAGCA...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAACTCTCGAAGGTTTTaGAGCAAATACACCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTINSRRF*SKYTQA
Trigger: TGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGTT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCAAGTGACTCCAAGTTTTaGACATGGGTAATAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSSDSKF*TWVIEG
Trigger: TCCCTCTATTACCCATGTCAAAAACTTGGAGTCACT...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp CATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACGAGGTTTGCAATCTAGGAAGTaGTTCCTGCACATCACTGTG +
Preference number: 5 (lower is better)
Translates to: HTSTAFQVCKSIKSMTRGLQSRK*FLHITV
Trigger: CACAGTGATGTGCAGGAACAACTTCCTAGATTGCAA...ACCTCGTGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCTTGTACGTGAGCACTaGCAATCTAGGAAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTILVREH*QSRKLF
Trigger: GAACAACTTCCTAGATTGCAAGTGCTCACGTACAAG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 90 bp TCCCATTTGCAAAGGGAATATTTATGTCTTGATTCAATGCCTCTTTaGCTTCGAGTGGCAGGGTATCAAAAAGGTGATCTTCCACAACAA +
Preference number: 5 (lower is better)
Translates to: SHLQREYLCLDSMPL*LRVAGYQKGDLPQQ
Trigger: TTGTTGTGGAAGATCACCTTTTTGATACCCTGCCACTCGAAGTCAAAGAGGCATTGAATCAAGACATAAATATTCCCTTTGCAAATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 90 bp AATCAGATGCTCAACTTTGGGCTTGCAGACGTGTTCAAAGCTGATTaGGTTGACAAAGTTCGCTGTATAGCAGAGAATAAAAATGAACTT +
Preference number: 5 (lower is better)
Translates to: NQMLNFGLADVFKAD*VDKVRCIAENKNEL
Trigger: AAGTTCATTTTTATTCTCTGCTATACAGCGAACTTTGTCAACGCAATCAGCTTTGAACACGTCTGCAAGCCCAAAGTTGAGCATCTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTCTGATCTTTGGTAAGTaGCATGGTTCCTGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTILIFGK*HGSCKD
Trigger: ATCTTTGCAGGAACCATGCAACTTACCAAAGATCAG...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAGCTGAAAATCCAAGTTaGTTTTTCGACCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQAENPS*FFDLLD
Trigger: ATCCAACAGGTCGAAAAACAAACTTGGATTTTCAGC...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTGATGTGTTTGTCTTTAGTGAACGGAGTTAAAGCAATATTGCACCAATTAAGCTCTCAGACAACGCTTTaGTCGTCCAAGGGGATTCAA +
Preference number: 5 (lower is better)
Translates to: LMCLSLVNGVKAILHQLSSQTTL*SSKGIQ
Trigger: TTGAATCCCCTTGGACGACAAAAGCGTTGTCTGAGA...GCTTAATTGGTGCAATATTGCTTTAACTCCGTTCACTAAAGACAAACACATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAATGAACTTGGCTGTTTaGATAACTGTTTGGACCACA +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQMNLAV*ITVWTT
Trigger: TGTGGTCCAAACAGTTATCAAAACAGCCAAGTTCAT...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACAGTGGTGTATGTGCCTTaGAATTTACAGGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTVVYVP*NLQEMA
Trigger: TGCCATCTCCTGTAAATTCAAAGGCACATACACCAC...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTGCTGAAAATCCAAGTTaGTTTTTCGACCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTIAENPS*FFDLLD
Trigger: ATCCAACAGGTCGAAAAACAAACTTGGATTTTCAGC...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TGTAATAACTTGTACGTGAGCACTTGCAATCTAGGAAGTTGTTCCTGCACATCATTAAAGCCAGTTTTATaGATCATTGGTGTACTGGCA +
Preference number: 5 (lower is better)
Translates to: CNNLYVSTCNLGSCSCTSLKPVL*IIGVLA
Trigger: TGCCAGTACACCAATGATCAATAAAACTGGCTTTAA...TGATGTGCAGGAACAACTTCCTAGATTGCAAGTGCTCACGTACAAGTTATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAATTGGAGGTTAGTCATTaGAGAAATCTTAGCAGGAAT +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQLEVSH*RNLSRN
Trigger: ATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAA...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACAGGAACTTTGGTCAAATaGCTCTTCACGTGGAGAATC +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTGTLVK*LFTWRI
Trigger: GATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCC...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp TTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAATTGTGCGAATGTTATaGGACTTTAAATCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: FSRQAICKHSVAAASKLQIVRML*DFKSSS
Trigger: GGAACTGGATTTAAAGTCCAATAACATTCGCACAAT...TTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTTTGGACTTGATGTGTTaGTCTTTAGTGAACGGAGTT +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTILDLMC*SLVNGV
Trigger: AACTCCGTTCACTAAAGACAAACACATCAAGTCCAA...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp ATTTACTTTAGCAGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGGTGAGAGGTGCTTACTaGAGGCACTTTAAATTAAAA +
Preference number: 5 (lower is better)
Translates to: IYFSRQAICKHSVAAASKVRGAY*RHFKLK
Trigger: TTTTAATTTAAAGTGCCTCAAGTAAGCACCTCTCAC...CTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCTGCTAAAGTAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACACTGATCTTTGGTAAGTaGCATGGTTCCTGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTLIFGK*HGSCKD
Trigger: ATCTTTGCAGGAACCATGCAACTTACCAAAGATCAG...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS-3UTR CAA 90 bp AGGCAAGCAATTTGTAAACATTCAGTAGCGGCAGCATCCAAGTTACAAACAATTAACGCAAAATCGTTTTaGACATCTGGAATGTCACTA +
Preference number: 5 (lower is better)
Translates to: RQAICKHSVAAASKLQTINAKSF*TSGMSL
Trigger: TAGTGACATTCCAGATGTCAAAAACGATTTTGCGTT...AATTGTTTGTAACTTGGATGCTGCCGCTACTGAATGTTTACAAATTGCTTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS-3UTR CAA 90 bp AATCCACATACCTCTACTGCATTCCAAGTCTGTAAGAGTATAAAATCTATGACAATTGTGCGAATGTTATaGGACTTTAAATCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: NPHTSTAFQVCKSIKSMTIVRML*DFKSSS
Trigger: GGAACTGGATTTAAAGTCCAATAACATTCGCACAAT...TGTCATAGATTTTATACTCTTACAGACTTGGAATGCAGTAGAGGTATGTGGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337338.9
CDS CCA 72 bp TTGCATAACTGCCATGGTGGGCACCCAGCGCTCCCCTaGCCGTGGCGACCCCGCCGCACCGGCTGCCCGCGT +
Preference number: 6 (lower is better)
Translates to: LHNCHGGHPALP*PWRPRRTGCPR
Trigger: ACGCGGGCAGCCGGTGCGGCGGGGTCGCCACGGCCAGGGGAGCGCTGGGTGCCCACCATGGCAGTTATGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527156.1
CDS CCA 72 bp CCCTGTTCTCTCAGGGCGCTCTCTGGGGACGCGGCTTaGGCGAGCTCCGGAGGCTGGAACCACGGCGACAGG +
Preference number: 6 (lower is better)
Translates to: PCSLRALSGDAA*ASSGGWNHGDR
Trigger: CCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CAA 72 bp CAGGGCGGCGGGGAGGCAAGACCAGGGGGTCACCGCTaGCATAACTGCCATGGTGGGCACCCAGCGCTCCCC +
Preference number: 6 (lower is better)
Translates to: QGGGEARPGGHR*HNCHGGHPALP
Trigger: GGGGAGCGCTGGGTGCCCACCATGGCAGTTATGCAAGCGGTGACCCCCTGGTCTTGCCTCCCCGCCGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527156.1
CDS CCA 72 bp GACCAAGCGGCCACCCTGTTCTCTCAGGGCGCTCTCTaGGGACGCGGCTTGGGCGAGCTCCGGAGGCTGGAA +
Preference number: 6 (lower is better)
Translates to: DQAATLFSQGAL*GRGLGELRRLE
Trigger: TTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGTGGCCGCTTGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CAA 72 bp ACCCTGTTCTCTCAGGGCGCTCTCTGGGGACGCGGCTaGGGCGAGCTCCGGAGGCTGGAACCACGGCGACAG +
Preference number: 6 (lower is better)
Translates to: TLFSQGALWGRG*GELRRLEPRRQ
Trigger: CTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp CAAGCGGCCACCCTGTTCTCTCAGGGCGCTCTCTGGGGACGCGGCTaGGGCGAGCTCCGGAGGCTGGAACCACGGCGACAGGAGACTTCA +
Preference number: 6 (lower is better)
Translates to: QAATLFSQGALWGRG*GELRRLEPRRQETS
Trigger: TGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAGCGCCCTGAGAGAACAGGGTGGCCGCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CCA 72 bp CTCTCTGGGGACGCGGCTTGGGCGAGCTCCGGAGGCTaGAACCACGGCGACAGGAGACTTCACTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: LSGDAAWASSGG*NHGDRRLHSSI
Trigger: GATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCCAGCCTCCGGAGCTCGCCCAAGCCGCGTCCCCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS GCA 72 bp AGCCCAGTTCCTAACAGCTCTCGACAGGTACCAGTCTaGAGCCTGGGGCCCGGGGACTCCTGGACCAAGCGG +
Preference number: 6 (lower is better)
Translates to: SPVPNSSRQVPV*SLGPGDSWTKR
Trigger: CCGCTTGGTCCAGGAGTCCCCGGGCCCCAGGCTGCAGACTGGTACCTGTCGAGAGCTGTTAGGAACTGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525774.5
CDS CCA 72 bp AGCCCGCTTTTCTTGAGCATCCGACACTGGCCCAGCTaGGCTGGCAGGCGGTCCAAGCAGTTCCCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SPLFLSIRHWPS*AGRRSKQFPFS
Trigger: GCTGAAGGGGAACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CCA 72 bp GCTTTTCTTGAGCATCCGACACTGGCCCAGCTGGGCTaGCAGGCGGTCCAAGCAGTTCCCCTTCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: AFLEHPTLAQLG*QAVQAVPLQLQ
Trigger: CTGGAGCTGAAGGGGAACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 72 bp GGAGAAGGCCCCTATCAACCCTCCAGTAACTGGAGGTaGTGGTCCTCCCGGCAACCACCCCCAATTCTCCTC +
Preference number: 6 (lower is better)
Translates to: GEGPYQPSSNWR*WSSRQPPPILL
Trigger: GAGGAGAATTGGGGGTGGTTGCCGGGAGGACCAGCACCTCCAGTTACTGGAGGGTTGATAGGGGCCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS CCA 72 bp TCCACAACAAGCCCGCTTTTCTTGAGCATCCGACACTaGCCCAGCTGGGCTGGCAGGCGGTCCAAGCAGTTC +
Preference number: 6 (lower is better)
Translates to: STTSPLFLSIRH*PSWAGRRSKQF
Trigger: GAACTGCTTGGACCGCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGTTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp GGAACCACGGCGACAGGAGACTTCACTCCTCCATCCTaGGACCCGGCAGCACGTTATAGACAGCCGTGCACT +
Preference number: 6 (lower is better)
Translates to: GTTATGDFTPPS*DPAARYRQPCT
Trigger: AGTGCACGGCTGTCTATAACGTGCTGCCGGGTCTCAGGATGGAGGAGTGAAGTCTCCTGTCGCCGTGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000525774.5
ENST00000527156.1
ENST00000532201.5
CDS CCA 72 bp GAAGGCCCCTATCAACCCTCCAGTAACTGGAGGTGCTaGTCCTCCCGGCAACCACCCCCAATTCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: EGPYQPSSNWRC*SSRQPPPILLL
Trigger: AAGGAGGAGAATTGGGGGTGGTTGCCGGGAGGACCAGCACCTCCAGTTACTGGAGGGTTGATAGGGGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS CCA 72 bp CGGAAAGGAGAAGGCCCCTATCAACCCTCCAGTAACTaGAGGTGCTGGTCCTCCCGGCAACCACCCCCAATT +
Preference number: 6 (lower is better)
Translates to: RKGEGPYQPSSN*RCWSSRQPPPI
Trigger: AATTGGGGGTGGTTGCCGGGAGGACCAGCACCTCCAGTTACTGGAGGGTTGATAGGGGCCTTCTCCTTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS TCA 72 bp CAAAAAGGTGATCTTCCACAACAAGCCCGCTTTTCTTaGGCATCCGACACTGGCCCAGCTGGGCTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: QKGDLPQQARFS*ASDTGPAGLAG
Trigger: GCCTGCCAGCCCAGCTGGGCCAGTGTCGGATGCTCAAGAAAAGCGGGCTTGTTGTGGAAGATCACCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS GCA 72 bp GTTTGTTGTCCGCCCATCTTGGTCTTGGTTGGTGGCTaGTTCCATCTTTGGGATGTTGGTGGTGACCTCGGC +
Preference number: 6 (lower is better)
Translates to: VCCPPILVLVGG*FHLWDVGGDLG
Trigger: GCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp CGCCCATCTTGGTCTTGGTTGGTGGCTGCTTCCATCTTTGGGATGTaGGTGGTGACCTCGGCATTTCCTGGTGGTGTATGTGCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: RPSWSWLVAASIFGM*VVTSAFPGGVCAFE
Trigger: TTCAAAGGCACATACACCACCAGGAAATGCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp GTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTTGGTCTTGGTaGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGTGACCTCGGCA +
Preference number: 6 (lower is better)
Translates to: VPKEMSFVVRPSWSW*VAASIFGMLVVTSA
Trigger: TGCCGAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS GCA 72 bp GCACTGGGGCTCCCTTCATCACTGCTGGTAGAAACATaGTTTGGTAGAGTCTGGGCACCTGTTATTCTCTGC +
Preference number: 6 (lower is better)
Translates to: ALGLPSSLLVET*FGRVWAPVILC
Trigger: GCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGTTTCTACCAGCAGTGATGAAGGGAGCCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS CAA 72 bp CAGGTGTCACAGCAGATGTCCCAAAGGAAATGTCGTTaGTTGTCCGCCCATCTTGGTCTTGGTTGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: QVSQQMSQRKCR*LSAHLGLGWWL
Trigger: CAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGTGACACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp AGATGTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTTGGTCTaGGTTGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: RCPKGNVVCCPPILV*VGGCFHLWDVGGDL
Trigger: GAGGTCACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp CACAGCAGATGTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTaGGTCTTGGTTGGTGGCTGCTTCCATCTTTGGGATGTTGGTGGT +
Preference number: 6 (lower is better)
Translates to: HSRCPKGNVVCCPPI*VLVGGCFHLWDVGG
Trigger: ACCACCAACATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp GAGGTATGTCAGGTGTCACAGCAGATGTCCCAAAGGAAATGTCGTTaGTTGTCCGCCCATCTTGGTCTTGGTTGGTGGCTGCTTCCATCT +
Preference number: 6 (lower is better)
Translates to: EVCQVSQQMSQRKCR*LSAHLGLGWWLLPS
Trigger: AGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGTGACACCTGACATACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 72 bp CTCATTTATCTGCAAGGGATACCCCCTAGTAAAGGGTaGCGGAAAGGAGAAGGCCCCTATCAACCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: LIYLQGIPPSKG*RKGEGPYQPSS
Trigger: ACTGGAGGGTTGATAGGGGCCTTCTCCTTTCCGTCACCCTTTACTAGGGGGTATCCCTTGCAGATAAATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394593.7
CDS CAA 72 bp GTGTCACAGCAGATGTCCCAAAGGAAATGTCGTTTGTaGTCCGCCCATCTTGGTCTTGGTTGGTGGCTGCTT +
Preference number: 6 (lower is better)
Translates to: VSQQMSQRKCRL*SAHLGLGWWLL
Trigger: AAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS CAA 90 bp GTATGTCAGGTGTCACAGCAGATGTCCCAAAGGAAATGTCGTTTGTaGTCCGCCCATCTTGGTCTTGGTTGGTGGCTGCTTCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: VCQVSQQMSQRKCRL*SAHLGLGWWLLPSL
Trigger: CAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACATCTGCTGTGACACCTGACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 72 bp GAACAGATGCAACTCCTGCTTGTCCTGGGCGTTGCGTaGAATGTGCTGCCTGAGTTTTTCAAATGTCCACTC +
Preference number: 6 (lower is better)
Translates to: EQMQLLLVLGVA*NVLPEFFKCPL
Trigger: GAGTGGACATTTGAAAAACTCAGGCAGCACATTTCACGCAACGCCCAGGACAAGCAGGAGTTGCATCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp TGTCCCAAAGGAAATGTCGTTTGTTGTCCGCCCATCTaGGTCTTGGTTGGTGGCTGCTTCCATCTTTGGGAT +
Preference number: 6 (lower is better)
Translates to: CPKGNVVCCPPI*VLVGGCFHLWD
Trigger: ATCCCAAAGATGGAAGCAGCCACCAACCAAGACCAAGATGGGCGGACAACAAACGACATTTCCTTTGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000441269.2
ENST00000527156.1
ENST00000532201.5
CDS TCA 72 bp GCCTCTTTGACTTCGAGTGGCAGGGTATCAAAAAGGTaGTCTTCCACAACAAGCCCGCTTTTCTTGAGCATC +
Preference number: 6 (lower is better)
Translates to: ASLTSSGRVSKR*SSTTSPLFLSI
Trigger: GATGCTCAAGAAAAGCGGGCTTGTTGTGGAAGATCACCTTTTTGATACCCTGCCACTCGAAGTCAAAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp TGCTTTGGTAGAGTCTGGGCACCTGTTATTCTCTGCTaGTTTTCCTCTGAGTCTTCGCATGCTGTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: CFGRVWAPVILC*FSSESSHAVSD
Trigger: GTCTGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS CAA 90 bp AGATGTGGAGCCACATCTGTAATGTTGGAGGGAACTTTGGTCAAATaGCTCTTCACGTGGAGAATCTTAAGGTGCCGCAACTCTCGGAGA +
Preference number: 6 (lower is better)
Translates to: RCGATSVMLEGTLVK*LFTWRILRCRNSRR
Trigger: TCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGTGGCTCCACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp AGTCTGGGCACCTGTTATTCTCTGCTTGTTTTCCTCTaGGTCTTCGCATGCTGTCTCAGACAACGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: SLGTCYSLLVFL*VFACCLRQRFC
Trigger: ACAAAAGCGTTGTCTGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGCCCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS GCA 72 bp ACATGCTTTGGTAGAGTCTGGGCACCTGTTATTCTCTaGTTGTTTTCCTCTGAGTCTTCGCATGCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: TCFGRVWAPVIL*LFSSESSHAVS
Trigger: TGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS GCA 72 bp TGGCCTGCTCTCCATCCTTTTTATCCAGGATTGTCATaGTGGGAACTTCAATCACAGGCTTCTCAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: WPALHPFYPGLS*WELQSQASQLK
Trigger: TTTCAGCTGAGAAGCCTGTGATTGAAGTTCCCAGCATGACAATCCTGGATAAAAAGGATGGAGAGCAGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CCA 72 bp ATGTTGGAGGGAACTTTGGTCAAATTGCTCTTCACGTaGAGAATCTTAAGGTGCCGCAACTCTCGGAGAGAT +
Preference number: 6 (lower is better)
Translates to: MLEGTLVKLLFT*RILRCRNSRRD
Trigger: ATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CCA 72 bp ATCCACTACAGCTCAGCAGCTGTGAGAGATTCAAGATaGGAAATTACTTGTCTTGTGCCTCGCTGGCTCAAA +
Preference number: 6 (lower is better)
Translates to: IHYSSAAVRDSR*EITCLVPRWLK
Trigger: TTTGAGCCAGCGAGGCACAAGACAAGTAATTTCCCATCTTGAATCTCTCACAGCTGCTGAGCTGTAGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414841.1
CDS CAA 72 bp CCTCTGAGTCTTCGCATGCTGTCTCAGACAACGCTTTaGTCGTCCAAGGGGATTCAAAGCACTTTCCTAATA +
Preference number: 6 (lower is better)
Translates to: PLSLRMLSQTTL*SSKGIQSTFLI
Trigger: TATTAGGAAAGTGCTTTGAATCCCCTTGGACGACAAAAGCGTTGTCTGAGACAGCATGCGAAGACTCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS CAA 72 bp GCCACATCTGTAATGTTGGAGGGAACTTTGGTCAAATaGCTCTTCACGTGGAGAATCTTAAGGTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: ATSVMLEGTLVK*LFTWRILRCRN
Trigger: GTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 90 bp GTAGAAACATGCTTTGGTAGAGTCTGGGCACCTGTTATTCTCTGCTaGTTTTCCTCTGAGTCTTCGCATGCTGTCTCAGACAACGCTTTT +
Preference number: 6 (lower is better)
Translates to: VETCFGRVWAPVILC*FSSESSHAVSDNAF
Trigger: AAAAGCGTTGTCTGAGACAGCATGCGAAGACTCAGAGGAAAACAAGCAGAGAATAACAGGTGCCCAGACTCTACCAAAGCATGTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS CAA 90 bp AGCAGTCTGTTCAACTTTTGCAGGGCAGTGGCAGAGGTGGAGCTCTaGGAGGTTAGTCATTTGAGAAATCTTAGCAGGAATTTTAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSLFNFCRAVAEVEL*EVSHLRNLSRNFSF
Trigger: GAAGCTAAAATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGCCACTGCCCTGCAAAAGTTGAACAGACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp CCACATCCCAGTATATCCACTACAGCTCAGCAGCTGTaGGAGATTCAAGATGGGAAATTACTTGTCTTGTGC +
Preference number: 6 (lower is better)
Translates to: PHPSISTTAQQL*EIQDGKLLVLC
Trigger: GCACAAGACAAGTAATTTCCCATCTTGAATCTCTCACAGCTGCTGAGCTGTAGTGGATATACTGGGATGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414841.1
CDS GCA 72 bp TTGGTCAAATTGCTCTTCACGTGGAGAATCTTAAGGTaGCGCAACTCTCGGAGAGATTCAAGTCCTATCATC +
Preference number: 6 (lower is better)
Translates to: LVKLLFTWRILR*RNSRRDSSPII
Trigger: GATGATAGGACTTGAATCTCTCCGAGAGTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 90 bp AACTTTGTAAGATGTGGAGCCACATCTGTAATGTTGGAGGGAACTTaGGTCAAATTGCTCTTCACGTGGAGAATCTTAAGGTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: NFVRCGATSVMLEGT*VKLLFTWRILRCRN
Trigger: GTTGCGGCACCTTAAGATTCTCCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGTGGCTCCACATCTTACAAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp TTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTGGACC +
Preference number: 6 (lower is better)
Translates to: FQDSVSWLNVIK*CNFRKGKHSWT
Trigger: GGTCCAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000414841.1
ENST00000527156.1
ENST00000532201.5
CDS CAA 72 bp GCAGTGGCAGAGGTGGAGCTCTTGGAGGTTAGTCATTaGAGAAATCTTAGCAGGAATTTTAGCTTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: AVAEVELLEVSH*RNLSRNFSFWN
Trigger: ATTCCAGAAGCTAAAATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGCCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 90 bp GCTTGTTTTCCTCTGAGTCTTCGCATGCTGTCTCAGACAACGCTTTaGTCGTCCAAGGGGATTCAAAGCACTTTCCTAATATTGAAACAA +
Preference number: 6 (lower is better)
Translates to: ACFPLSLRMLSQTTL*SSKGIQSTFLILKQ
Trigger: TTGTTTCAATATTAGGAAAGTGCTTTGAATCCCCTTGGACGACAAAAGCGTTGTCTGAGACAGCATGCGAAGACTCAGAGGAAAACAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337338.9
ENST00000394593.7
ENST00000441269.2
CDS TCA 72 bp CGCTTGGAATATAGCTGGTCATACTGGTCTACCATGTaGAGAAGGAACGCAAAATCGTTTTTGACATCTGGA +
Preference number: 6 (lower is better)
Translates to: RLEYSWSYWSTM*RRNAKSFLTSG
Trigger: TCCAGATGTCAAAAACGATTTTGCGTTCCTTCTTCACATGGTAGACCAGTATGACCAGCTATATTCCAAGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp CAGTGGCAGAGGTGGAGCTCTTGGAGGTTAGTCATTTaGGAAATCTTAGCAGGAATTTTAGCTTCTGGAATT +
Preference number: 6 (lower is better)
Translates to: QWQRWSSWRLVI*EILAGILASGI
Trigger: AATTCCAGAAGCTAAAATTCCTGCTAAGATTTCTCAAATGACTAACCTCCAAGAGCTCCACCTCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp TTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTACTGC +
Preference number: 6 (lower is better)
Translates to: FQDSVSWLNVIK*CNFRKGKHSYC
Trigger: GCAGTAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525774.5
CDS GCA 72 bp CTCAACTTTGGGCTTGCAGACGTGTTCAAAGCTGATTaGGTTGACAAAGTTCGCTGTATAGCAGAGAATAAA +
Preference number: 6 (lower is better)
Translates to: LNFGLADVFKAD*VDKVRCIAENK
Trigger: TTTATTCTCTGCTATACAGCGAACTTTGTCAACGCAATCAGCTTTGAACACGTCTGCAAGCCCAAAGTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp ACTAACTTTGTAAGATGTGGAGCCACATCTGTAATGTaGGAGGGAACTTTGGTCAAATTGCTCTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: TNFVRCGATSVM*EGTLVKLLFTW
Trigger: CCACGTGAAGAGCAATTTGACCAAAGTTCCCTCCAACATTACAGATGTGGCTCCACATCTTACAAAGTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp TTTCAGGATTCGGTAAGTTGGCTGAATGTCATTAAGTaGTGCAACTTCCGCAAGGGTAAACATTCCTTGAGT +
Preference number: 6 (lower is better)
Translates to: FQDSVSWLNVIK*CNFRKGKHSLS
Trigger: ACTCAAGGAATGTTTACCCTTGCGGAAGTTGCATCACTTAATGACATTCAGCCAACTTACCGAATCCTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441269.2
CDS CCA 72 bp AAAATAGCATGTGGGATTCTCTCTAGCTCACAGTTCTaGAGTTCCAGCTCAGCGACATTCATCATTTTCTTA +
Preference number: 6 (lower is better)
Translates to: KIACGILSSSQF*SSSSATFIIFL
Trigger: TAAGAAAATGATGAATGTCGCTGAGCTGGAACTCCAGAACTGTGAGCTAGAGAGAATCCCACATGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS TCA 72 bp TCAAATTGCCTATTAAGTACAACTCTCGAAGGTTTTTaGGCAAATACACCCAGGCAGGAATTTCAGCCACAT +
Preference number: 6 (lower is better)
Translates to: SNCLLSTTLEGF*ANTPRQEFQPH
Trigger: ATGTGGCTGAAATTCCTGCCTGGGTGTATTTGCTCAAAAACCTTCGAGAGTTGTACTTAATAGGCAATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp GCAAATGCTGCAGGTTCTGAAGCAATCCTATTTCTATaGGAATCATTGAAATGTTGTTGTAGCTCACATCTA +
Preference number: 6 (lower is better)
Translates to: ANAAGSEAILFL*ESLKCCCSSHL
Trigger: TAGATGTGAGCTACAACAACATTTCAATGATTCCAATAGAAATAGGATTGCTTCAGAACCTGCAGCATTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 90 bp CGGAGAGATTCAAGTCCTATCATCTTATTGTTTTCAGAGTTCAAATaGCCTATTAAGTACAACTCTCGAAGGTTTTTGAGCAAATACACC +
Preference number: 6 (lower is better)
Translates to: RRDSSPIILLFSEFK*PIKYNSRRFLSKYT
Trigger: GGTGTATTTGCTCAAAAACCTTCGAGAGTTGTACTTAATAGGCAATTTGAACTCTGAAAACAATAAGATGATAGGACTTGAATCTCTCCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp TGGAAACTGATGATTTCCTCAATTGTGCGAATGTTATaGGACTTTAAATCCAGTTCCTGTAAATTAGAGAGG +
Preference number: 6 (lower is better)
Translates to: WKLMISSIVRML*DFKSSSCKLER
Trigger: CCTCTCTAATTTACAGGAACTGGATTTAAAGTCCAATAACATTCGCACAATTGAGGAAATCATCAGTTTCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7
CDS CAA 72 bp TCAAGTCCTATCATCTTATTGTTTTCAGAGTTCAAATaGCCTATTAAGTACAACTCTCGAAGGTTTTTGAGC +
Preference number: 6 (lower is better)
Translates to: SSPIILLFSEFK*PIKYNSRRFLS
Trigger: GCTCAAAAACCTTCGAGAGTTGTACTTAATAGGCAATTTGAACTCTGAAAACAATAAGATGATAGGACTTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337338.9
ENST00000394593.7