Pregenerated sensors for LRRC8C-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000231999Ensembl transcript IDs: ENST00000415584.7, ENST00000443562.2, ENST00000526694.2, ENST00000528692.1, ENST00000655657.1, ENST00000655898.1, ENST00000660266.1, ENST00000660444.1, ENST00000666079.1, ENST00000666228.1, ENST00000666432.1
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGCTGCGCGCACAGCCGCCTGTGGTTTTCCGCGCATTGTGAGGGATaGGGGGTGGAGGTGGTATTAGACGCAGCCGAATCCTCCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RCAHSRLWFSAHCEG*GVEVVLDAAESSLR Trigger: TCTGAGGGAGGATTCGGCTGCGTCTAATACCACCTCCACCCCTCATCCCTCACAATGCGCGGAAAACCACAGGCGGCTGTGCGCGCAGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000415584.7 ENST00000526694.2 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666432.1 |
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| CDS CCA 90 bp | ACCAAGACTCATAAGGTAGGGAATTCCCTCGACATGGGAACGTGCTaGGCAGTCCCTGGGTGGCGGATATTCACTGAGCAGGCACTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TKTHKVGNSLDMGTC*AVPGWRIFTEQALQ Trigger: CTGAAGTGCCTGCTCAGTGAATATCCGCCACCCAGGGACTGCCCAGCACGTTCCCATGTCGAGGGAATTCCCTACCTTATGAGTCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 90 bp | CCTGTAATCCCAGCTAGTCAGGAGGATGAGGCAAGGAGAATTGCTTaGACCTGGAAGGCGGAAGTTGCAGTCAGCGAGATCACACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PVIPASQEDEARRIA*TWKAEVAVSEITQH Trigger: ATGCTGTGTGATCTCGCTGACTGCAACTTCCGCCTTCCAGGTTCAAGCAATTCTCCTTGCCTCATCCTCCTGACTAGCTGGGATTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 90 bp | GGACAGCTGCTTAGAAATGCCTCATTAGAGGAACGGCTCTCTCAGTaGGATGGATGGTGGAAGACCAAGGTACTTCGGGAAGATACTGGC | + |
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Preference number: 5 (lower is better) Translates to: GQLLRNASLEERLSQ*DGWWKTKVLREDTG Trigger: GCCAGTATCTTCCCGAAGTACCTTGGTCTTCCACCATCCATCCCACTGAGAGAGCCGTTCCTCTAATGAGGCATTTCTAAGCAGCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415584.7 |
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| CDS GCA 90 bp | GAGACAAAGACTCTCATACCTGAAAGGAACACTGAGTCCGCAGACTaGAGCCTGGGGGTCAAGTCTACCCACTGCCTGTTTTTATACAGC | + |
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Preference number: 5 (lower is better) Translates to: ETKTLIPERNTESAD*SLGVKSTHCLFLYS Trigger: GCTGTATAAAAACAGGCAGTGGGTAGACTTGACCCCCAGGCTGCAGTCTGCGGACTCAGTGTTCCTTTCAGGTATGAGAGTCTTTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS GCA 90 bp | TGTAACTTCTGGGCCCAAGTGATGTTGCACCTCGGCCTCCCAGAATaGTGGGGTTATAGGTATGAGCCACCTTCTCTTGGCCCATTTTTA | + |
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Preference number: 5 (lower is better) Translates to: CNFWAQVMLHLGLPE*WGYRYEPPSLGPFL Trigger: TAAAAATGGGCCAAGAGAAGGTGGCTCATACCTATAACCCCAGCATTCTGGGAGGCCGAGGTGCAACATCACTTGGGCCCAGAAGTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 90 bp | GATTCCACATGGGGTACAGTGGTATATGTGGGTGGACATGGAAGGTaGGAGAAATGGAGGCAAGATCCATCCCTATCACAGTGCCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: DSTWGTVVYVGGHGR*EKWRQDPSLSQCQR Trigger: TCTTTGGCACTGTGATAGGGATGGATCTTGCCTCCATTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 90 bp | TGGGGTACAGTGGTATATGTGGGTGGACATGGAAGGTGGGAGAAATaGAGGCAAGATCCATCCCTATCACAGTGCCAAAGAGTAATTGGA | + |
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Preference number: 5 (lower is better) Translates to: WGTVVYVGGHGRWEK*RQDPSLSQCQRVIG Trigger: TCCAATTACTCTTTGGCACTGTGATAGGGATGGATCTTGCCTCCATTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 90 bp | TATGCATCAATCCAAGTGATTCCACATGGGGTACAGTGGTATATGTaGGTGGACATGGAAGGTGGGAGAAATGGAGGCAAGATCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: YASIQVIPHGVQWYM*VDMEGGRNGGKIHP Trigger: GGGATGGATCTTGCCTCCATTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 90 bp | TGTGTCTCCTATGCATCAATCCAAGTGATTCCACATGGGGTACAGTaGTATATGTGGGTGGACATGGAAGGTGGGAGAAATGGAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: CVSYASIQVIPHGVQ*YMWVDMEGGRNGGK Trigger: CTTGCCTCCATTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 90 bp | TTGACACTGGGTAGCAAGGGAGCATTTCAGGGATGCCTAAGCTTGTaGTCAGGTGCCAACGGTACAAAGATAGAAGTATATCAGAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: LTLGSKGAFQGCLSL*SGANGTKIEVYQRA Trigger: GGCTCTCTGATATACTTCTATCTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACCCAGTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 90 bp | GGGAATGGGGAAATCCAGCAAGGCCTGTCTGTTCAGATTTCTTCTTaGCCTTTCGATATAACATTCCTTCCTCCCAGGTATGGGGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: GNGEIQQGLSVQISS*PFDITFLPPRYGVG Trigger: TCCTACCCCATACCTGGGAGGAAGGAATGTTATATCGAAAGGCCAAGAAGAAATCTGAACAGACAGGCCTTGCTGGATTTCCCCATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS GCA 90 bp | TTCAATGATTCCTTGACACTGGGTAGCAAGGGAGCATTTCAGGGATaGCTAAGCTTGTGGTCAGGTGCCAACGGTACAAAGATAGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: FNDSLTLGSKGAFQG*LSLWSGANGTKIEV Trigger: TACTTCTATCTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACCCAGTGTCAAGGAATCATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 90 bp | TTAGTTTTGGAGGCTGAGAAGTTCGGGTCAAGTCACCAGCAGATTTaGTGGCTGGTAAGGGCTTCTCTGCTTCATAGATGGTACCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LVLEAEKFGSSHQQI*WLVRASLLHRWYLF Trigger: AAAAAGGTACCATCTATGAAGCAGAGAAGCCCTTACCAGCCACCAAATCTGCTGGTGACTTGACCCGAACTTCTCAGCCTCCAAAACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666079.1 |
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| CDS CCA 90 bp | GAAGGCAGACACAAGAGTAGCCAAAAGTATTGCAATAAAGCAACTTaGGGTGGACTCAACTTGCAGGGGATTCAGATCCCAGGTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: EGRHKSSQKYCNKAT*GGLNLQGIQIPGFQ Trigger: TTGGAAACCTGGGATCTGAATCCCCTGCAAGTTGAGTCCACCCCAAGTTGCTTTATTGCAATACTTTTGGCTACTCTTGTGTCTGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 90 bp | AAGGTGTGGAAAGGAGCTTACTCAGACATTTTGGAAGGTAAAATGTaGCCACTGGAAATTAGGTGGCTGGCTGTGGTGACTCATAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: KVWKGAYSDILEGKM*PLEIRWLAVVTHSC Trigger: ACAGCTATGAGTCACCACAGCCAGCCACCTAATTTCCAGTGGTCACATTTTACCTTCCAAAATGTCTGAGTAAGCTCCTTTCCACACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
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| CDS TCA 90 bp | CTGAAATTGACTTGCCTAGGCCCAAATCCCAACTCTTCTACTCACTaGTTATGTGACCTTCAGCTAGCTACTGGATTACAATGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LKLTCLGPNPNSSTH*LCDLQLATGLQWAS Trigger: AGAGGCCCATTGTAATCCAGTAGCTAGCTGAAGGTCACATAATCAGTGAGTAGAAGAGTTGGGATTTGGGCCTAGGCAAGTCAATTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 90 bp | CACCAGCAGATTTGGTGGCTGGTAAGGGCTTCTCTGCTTCATAGATaGTACCTTTTTGCTGTCTCTTTGCTGCATCTTCATATGGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: HQQIWWLVRASLLHR*YLFAVSLLHLHMAK Trigger: TTTTGCCATATGAAGATGCAGCAAAGAGACAGCAAAAAGGTACCATCTATGAAGCAGAGAAGCCCTTACCAGCCACCAAATCTGCTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666079.1 |
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| CDS CCA 90 bp | ATTCTTCTACTGTGTCTCCTATGCATCAATCCAAGTGATTCCACATaGGGTACAGTGGTATATGTGGGTGGACATGGAAGGTGGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ILLLCLLCINPSDST*GTVVYVGGHGRWEK Trigger: TTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAGTAGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 90 bp | ACATCATTTATAGAGTATATCAGCTCAGAGCACTGCTTCTGTTCTTaGAAACTTGATGTTGCTGCTGTTGTGACCCTAGGCCTCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TSFIEYISSEHCFCS*KLDVAAVVTLGLPQ Trigger: CTGTGGGAGGCCTAGGGTCACAACAGCAGCAACATCAAGTTTTCAAGAACAGAAGCAGTGCTCTGAGCTGATATACTCTATAAATGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
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| CDS TCA 90 bp | CTACAGCAGGTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTATCTGCCTTTTCCAGACTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQQVNVFLFINMEGL*TPSFLVYLPFPDCQ Trigger: CTGGCAGTCTGGAAAAGGCAGATAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCACCTGCTGTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655898.1 |
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| CDS TCA 90 bp | CTACTCTACTATTCTTCTACTGTGTCTCCTATGCATCAATCCAAGTaGTTCCACATGGGGTACAGTGGTATATGTGGGTGGACATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LLYYSSTVSPMHQSK*FHMGYSGICGWTWK Trigger: CTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAGTAGAAGAATAGTAGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS GCA 90 bp | AGACCATTTAGTAAGGTGGGTCAGAATGGAGAGTGCCTGGAAGTCTaGCAGTCAAATTCATGTTTGATTCATTGGATAGTGACTAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RPFSKVGQNGECLEV*QSNSCLIHWIVTRV Trigger: CACCCTAGTCACTATCCAATGAATCAAACATGAATTTGACTGGCAGACTTCCAGGCACTCTCCATTCTGACCCACCTTACTAAATGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 90 bp | TATAGAAGGGTCTTGAGTATAGAAGCTTCTGTATCAGTGGAGTTTTaGGGTACACCTACCCCTACAGCAGGTGAATGTGTTCTTGTTCAT | + |
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Preference number: 5 (lower is better) Translates to: YRRVLSIEASVSVEF*GTPTPTAGECVLVH Trigger: ATGAACAAGAACACATTCACCTGCTGTAGGGGTAGGTGTACCCCAAAACTCCACTGATACAGAAGCTTCTATACTCAAGACCCTTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000526694.2 ENST00000655898.1 ENST00000666432.1 |
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| CDS CCA 90 bp | GAAATGGAGGCAAGATCCATCCCTATCACAGTGCCAAAGAGTAATTaGATTATGGTGGCATTGATTGTAATGGAGAGAAGCACAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: EMEARSIPITVPKSN*IMVALIVMERSTRH Trigger: ATGCCTTGTGCTTCTCTCCATTACAATCAATGCCACCATAATCCAATTACTCTTTGGCACTGTGATAGGGATGGATCTTGCCTCCATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 90 bp | CTACAGCAGGTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTATACATCTGCCTTTTCCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: LQQVNVFLFINMEGL*TPSFLVYTSAFSRL Trigger: CAGTCTGGAAAAGGCAGATGTATAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCACCTGCTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000526694.2 |
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| CDS CCA 90 bp | TCACTAAATGGTCCCCCATCTAAGAGACTATGGTTCAGAGTTGGATaGCCTATAGTTTCAAATGAAACCAGAAGACTTATGTGCCCCTTA | + |
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Preference number: 5 (lower is better) Translates to: SLNGPPSKRLWFRVG*PIVSNETRRLMCPL Trigger: TAAGGGGCACATAAGTCTTCTGGTTTCATTTGAAACTATAGGCCATCCAACTCTGAACCATAGTCTCTTAGATGGGGGACCATTTAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
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| CDS GCA 90 bp | TGCTGGGGTTATAGGTATGAGCCACCTTCTCTTGGCCCATTTTTATaGTTGGGTTCAATGAAGTATGGAAAGCTGTGTAGAAATATGATT | + |
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Preference number: 5 (lower is better) Translates to: CWGYRYEPPSLGPFL*LGSMKYGKLCRNMI Trigger: AATCATATTTCTACACAGCTTTCCATACTTCATTGAACCCAAGCATAAAAATGGGCCAAGAGAAGGTGGCTCATACCTATAACCCCAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 90 bp | CTACAGCAGGTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTCTATAAAGGCATCATTACATAGG | + |
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Preference number: 5 (lower is better) Translates to: LQQVNVFLFINMEGL*TPSFLVSIKASLHR Trigger: CCTATGTAATGATGCCTTTATAGAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCACCTGCTGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS GCA 90 bp | AAACATTCTGATTTCTACTCTACTATTCTTCTACTGTGTCTCCTATaGATCAATCCAAGTGATTCCACATGGGGTACAGTGGTATATGTG | + |
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Preference number: 5 (lower is better) Translates to: KHSDFYSTILLLCLL*INPSDSTWGTVVYV Trigger: CACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAGTAGAAGAATAGTAGAGTAGAAATCAGAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 90 bp | ACATTGAGCATCCCAAATCTGAGGTGCTCCAAATTTTCTGAACACTaGCATAAGGCTTATAGGAAATTCTCATTGGAGCATTTTAGACTT | + |
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Preference number: 5 (lower is better) Translates to: TLSIPNLRCSKFSEH*HKAYRKFSLEHFRL Trigger: AAGTCTAAAATGCTCCAATGAGAATTTCCTATAAGCCTTATGTCAGTGTTCAGAAAATTTGGAGCACCTCAGATTTGGGATGCTCAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 90 bp | CAGGTTTCCAAACCTTTTTGCTATTCCTGGTTCTTTTGCTTTCAGTaGAGAGTAGTTAAGTACAATAGTAGCTCTCATTTACTGACTACT | + |
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Preference number: 5 (lower is better) Translates to: QVSKPFCYSWFFCFQ*RVVKYNSSSHLLTT Trigger: AGTAGTCAGTAAATGAGAGCTACTATTGTACTTAACTACTCTTCACTGAAAGCAAAAGAACCAGGAATAGCAAAAAGGTTTGGAAACCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 90 bp | ATTTGGTATGCTCAACTGGTAAGTATAGTGCAAATATTCAAAATCTaGAATCCAGAACACTTCTGGTCCCAAGGAATTTGGGTAACAGAT | + |
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Preference number: 5 (lower is better) Translates to: IWYAQLVSIVQIFKI*NPEHFWSQGIWVTD Trigger: ATCTGTTACCCAAATTCCTTGGGACCAGAAGTGTTCTGGATTTCAGATTTTGAATATTTGCACTATACTTACCAGTTGAGCATACCAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 90 bp | TTTGATCATATTTTTGCTGCAGGATTCTTCAGAGCCTTTAACATATaGATATGCATTGTGCTTCTCCAAGGAGAGATGGTATGCAATATT | + |
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Preference number: 5 (lower is better) Translates to: FDHIFAAGFFRAFNI*ICIVLLQGEMVCNI Trigger: AATATTGCATACCATCTCTCCTTGGAGAAGCACAATGCATATTCATATGTTAAAGGCTCTGAAGAATCCTGCAGCAAAAATATGATCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS GCA 72 bp | ATCCCAGGGGAGGAGCTGCGGTGGCTGAGCCGACGCTaGGCGCACAGCCGCCTGTGGTTTTCCGCGCATTGT | + |
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Preference number: 6 (lower is better) Translates to: IPGEELRWLSRR*AHSRLWFSAHC Trigger: ACAATGCGCGGAAAACCACAGGCGGCTGTGCGCGCAGCGTCGGCTCAGCCACCGCAGCTCCTCCCCTGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000415584.7 ENST00000526694.2 ENST00000528692.1 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666432.1 |
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| CDS CCA 72 bp | TCAGAGTGCTTTTTCATCCCAGGGGAGGAGCTGCGGTaGCTGAGCCGACGCTGCGCGCACAGCCGCCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SECFFIPGEELR*LSRRCAHSRLW Trigger: CCACAGGCGGCTGTGCGCGCAGCGTCGGCTCAGCCACCGCAGCTCCTCCCCTGGGATGAAAAAGCACTCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000415584.7 ENST00000526694.2 ENST00000528692.1 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666432.1 |
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| CDS TCA 72 bp | AGTGCTTTTTCATCCCAGGGGAGGAGCTGCGGTGGCTaGGCCGACGCTGCGCGCACAGCCGCCTGTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SAFSSQGRSCGG*ADAARTAACGF Trigger: AAAACCACAGGCGGCTGTGCGCGCAGCGTCGGCTCAGCCACCGCAGCTCCTCCCCTGGGATGAAAAAGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000415584.7 ENST00000526694.2 ENST00000528692.1 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666432.1 |
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| CDS TCA 72 bp | CACAGCCGCCTGTGGTTTTCCGCGCATTGTGAGGGATaGGGGGTGGAGGTGGTATTAGACGCAGCCGAATCC | + |
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Preference number: 6 (lower is better) Translates to: HSRLWFSAHCEG*GVEVVLDAAES Trigger: GGATTCGGCTGCGTCTAATACCACCTCCACCCCTCATCCCTCACAATGCGCGGAAAACCACAGGCGGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000415584.7 ENST00000526694.2 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666432.1 |
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| CDS GCA 72 bp | TGGGCCCAAGTGATGTTGCACCTCGGCCTCCCAGAATaGTGGGGTTATAGGTATGAGCCACCTTCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: WAQVMLHLGLPE*WGYRYEPPSLG Trigger: GCCAAGAGAAGGTGGCTCATACCTATAACCCCAGCATTCTGGGAGGCCGAGGTGCAACATCACTTGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 72 bp | CATAAGGTAGGGAATTCCCTCGACATGGGAACGTGCTaGGCAGTCCCTGGGTGGCGGATATTCACTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HKVGNSLDMGTC*AVPGWRIFTEQ Trigger: CTGCTCAGTGAATATCCGCCACCCAGGGACTGCCCAGCACGTTCCCATGTCGAGGGAATTCCCTACCTTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS GCA 72 bp | ACTCATAAGGTAGGGAATTCCCTCGACATGGGAACGTaGTGGGCAGTCCCTGGGTGGCGGATATTCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: THKVGNSLDMGT*WAVPGWRIFTE Trigger: CTCAGTGAATATCCGCCACCCAGGGACTGCCCAGCACGTTCCCATGTCGAGGGAATTCCCTACCTTATGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 72 bp | CCAGCTAGTCAGGAGGATGAGGCAAGGAGAATTGCTTaGACCTGGAAGGCGGAAGTTGCAGTCAGCGAGATC | + |
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Preference number: 6 (lower is better) Translates to: PASQEDEARRIA*TWKAEVAVSEI Trigger: GATCTCGCTGACTGCAACTTCCGCCTTCCAGGTTCAAGCAATTCTCCTTGCCTCATCCTCCTGACTAGCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS GCA 72 bp | ACTCTCATACCTGAAAGGAACACTGAGTCCGCAGACTaGAGCCTGGGGGTCAAGTCTACCCACTGCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: TLIPERNTESAD*SLGVKSTHCLF Trigger: AAACAGGCAGTGGGTAGACTTGACCCCCAGGCTGCAGTCTGCGGACTCAGTGTTCCTTTCAGGTATGAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 72 bp | GCCTCATTAGAGGAACGGCTCTCTCAGTGGGATGGATaGTGGAAGACCAAGGTACTTCGGGAAGATACTGGC | + |
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Preference number: 6 (lower is better) Translates to: ASLEERLSQWDG*WKTKVLREDTG Trigger: GCCAGTATCTTCCCGAAGTACCTTGGTCTTCCACCATCCATCCCACTGAGAGAGCCGTTCCTCTAATGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415584.7 |
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| CDS GCA 72 bp | TCCTTGACACTGGGTAGCAAGGGAGCATTTCAGGGATaGCTAAGCTTGTGGTCAGGTGCCAACGGTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLTLGSKGAFQG*LSLWSGANGTK Trigger: CTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACCCAGTGTCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CCA 72 bp | GAGGCTGAGAAGTTCGGGTCAAGTCACCAGCAGATTTaGTGGCTGGTAAGGGCTTCTCTGCTTCATAGATGG | + |
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Preference number: 6 (lower is better) Translates to: EAEKFGSSHQQI*WLVRASLLHRW Trigger: CCATCTATGAAGCAGAGAAGCCCTTACCAGCCACCAAATCTGCTGGTGACTTGACCCGAACTTCTCAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666079.1 |
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| CDS CCA 72 bp | GGAAGACCAAGGTACTTCGGGAAGATACTGGCTGACTaGTCTGCCCTGCCTGTAGACAGAATTCCTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GRPRYFGKILAD*SALPVDRIPVD Trigger: ATCTACAGGAATTCTGTCTACAGGCAGGGCAGACCAGTCAGCCAGTATCTTCCCGAAGTACCTTGGTCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415584.7 |
||
| CDS CCA 72 bp | GCTGAGAAGTTCGGGTCAAGTCACCAGCAGATTTGGTaGCTGGTAAGGGCTTCTCTGCTTCATAGATGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AEKFGSSHQQIW*LVRASLLHRWY Trigger: GTACCATCTATGAAGCAGAGAAGCCCTTACCAGCCACCAAATCTGCTGGTGACTTGACCCGAACTTCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666079.1 |
||
| CDS CCA 72 bp | AAATGCCTCATTAGAGGAACGGCTCTCTCAGTGGGATaGATGGTGGAAGACCAAGGTACTTCGGGAAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: KCLIRGTALSVG*MVEDQGTSGRY Trigger: GTATCTTCCCGAAGTACCTTGGTCTTCCACCATCCATCCCACTGAGAGAGCCGTTCCTCTAATGAGGCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415584.7 |
||
| CDS CCA 72 bp | AACATTCCTTCCTCCCAGGTATGGGGTAGGACCCCCTaGAATGAGGGTCTTAATTTCTTTATGGCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: NIPSSQVWGRTP*NEGLNFFMASS Trigger: ACTGCTGGCCATAAAGAAATTAAGACCCTCATTCCAGGGGGTCCTACCCCATACCTGGGAGGAAGGAATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 72 bp | CTGGGTAGCAAGGGAGCATTTCAGGGATGCCTAAGCTaGTGGTCAGGTGCCAACGGTACAAAGATAGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGSKGAFQGCLS*WSGANGTKIEV Trigger: TACTTCTATCTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 90 bp | ACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTTGACTTaGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSAFSRLPARSTSLT*GALQIAGIDKAFPE Trigger: TTCTGGGAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415584.7 ENST00000443562.2 ENST00000526694.2 ENST00000528692.1 ENST00000655657.1 ENST00000666079.1 ENST00000666432.1 |
||
| CDS CAA 90 bp | AGATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTTGACTTaGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RSAFSRLPARSTSLT*GALQIAGIDKAFPE Trigger: TTCTGGGAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666228.1 |
||
| CDS CAA 90 bp | CTATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTTGACTTaGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSAFSRLPARSTSLT*GALQIAGIDKAFPE Trigger: TTCTGGGAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660266.1 |
||
| CDS TCA 72 bp | TCTACACTCCCAAAAGGTCAAAGGTCCAGGTGGGGCTaGAAATTCCAACCCTCTAGTCTAGACACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: STLPKGQRSRWG*KFQPSSLDTHT Trigger: TGTGTGTGTGTCTAGACTAGAGGGTTGGAATTTTCAGCCCCACCTGGACCTTTGACCTTTTGGGAGTGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CCA 72 bp | GGTAGTAGATCTCTCATGAGTGGGCCCGTCTTTCCTTaGAATTCATCAGGGACAGATGTTCATAGAACGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSRSLMSGPVFP*NSSGTDVHRTP Trigger: AGGCGTTCTATGAACATCTGTCCCTGATGAATTCCAAGGAAAGACGGGCCCACTCATGAGAGATCTACTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443562.2 |
||
| CDS CCA 72 bp | TCATCAACATGGAAGGTCTCTGAACTCCATCCTTTTTaGTTTATCTGCCTTTTCCAGACTGCCAGCGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSTWKVSELHPF*FICLFQTASAE Trigger: CTCCGCGCTGGCAGTCTGGAAAAGGCAGATAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655898.1 |
||
| CDS CCA 72 bp | CTGTGTCTCCTATGCATCAATCCAAGTGATTCCACATaGGGTACAGTGGTATATGTGGGTGGACATGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCLLCINPSDST*GTVVYVGGHGR Trigger: CCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
||
| CDS CAA 72 bp | TTTTCCAGACTGCCAGCGCGGAGCACTAGTTTGACTTaGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: FSRLPARSTSLT*GALQIAGIDKA Trigger: TGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000415584.7 ENST00000443562.2 ENST00000526694.2 ENST00000528692.1 ENST00000655657.1 ENST00000655898.1 ENST00000660266.1 ENST00000666079.1 ENST00000666228.1 ENST00000666432.1 |
||
| CDS CAA 90 bp | TCACATACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SHTSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGTATGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000528692.1 ENST00000666432.1 |
||
| CDS CAA 90 bp | TTATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTTGACTTaGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LSAFSRLPARSTSLT*GALQIAGIDKAFPE Trigger: TTCTGGGAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655898.1 |
||
| CDS CAA 90 bp | AGAGATACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: RDTSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGTATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655657.1 |
||
| CDS CAA 90 bp | CACTATACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: HYTSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGTATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666079.1 |
||
| CDS CAA 90 bp | AGAGAGCCCTTGCAGAATAAGGCCCTCCACAGGAGGGTTGTGACCTaGGTACTTGCCTCACTGTGTTTAAATTCAGGTAAGGTAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: REPLQNKALHRRVVT*VLASLCLNSGKVRE Trigger: TTCTCTTACCTTACCTGAATTTAAACACAGTGAGGCAAGTACCAAGGTCACAACCCTCCTGTGGAGGGCCTTATTCTGCAAGGGCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 90 bp | TCCTTGACACTGGGTAGCAAGGGAGCATTTCAGGGATGCCTAAGCTaGTGGTCAGGTGCCAACGGTACAAAGATAGAAGTATATCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLTLGSKGAFQGCLS*WSGANGTKIEVYQR Trigger: TCTCTGATATACTTCTATCTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACCCAGTGTCAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 90 bp | GTTTATACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: VYTSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGTATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000526694.2 |
||
| CDS CAA 90 bp | TTTGGTTTATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: FGLSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATAAACCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655898.1 |
||
| CDS CAA 90 bp | AATTCACTATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: NSLSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATAGTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660266.1 |
||
| CDS CCA 72 bp | GGTAGCAAGGGAGCATTTCAGGGATGCCTAAGCTTGTaGTCAGGTGCCAACGGTACAAAGATAGAAGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: GSKGAFQGCLSL*SGANGTKIEVY Trigger: ATATACTTCTATCTTTGTACCGTTGGCACCTGACCACAAGCTTAGGCATCCCTGAAATGCTCCCTTGCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 72 bp | TTGCAGAATAAGGCCCTCCACAGGAGGGTTGTGACCTaGGTACTTGCCTCACTGTGTTTAAATTCAGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQNKALHRRVVT*VLASLCLNSGK Trigger: CTTACCTGAATTTAAACACAGTGAGGCAAGTACCAAGGTCACAACCCTCCTGTGGAGGGCCTTATTCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 90 bp | AAATATACATCTGCCTTTTCCAGACTGCCAGCGCGGAGCACTAGTTaGACTTTGGGTGCTCTTCAAATAGCTGGCATTGATAAGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: KYTSAFSRLPARSTS*TLGALQIAGIDKAF Trigger: GAATGCCTTATCAATGCCAGCTATTTGAAGAGCACCCAAAGTCAAACTAGTGCTCCGCGCTGGCAGTCTGGAAAAGGCAGATGTATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415584.7 |
||
| CDS CCA 72 bp | TATGCATCAATCCAAGTGATTCCACATGGGGTACAGTaGTATATGTGGGTGGACATGGAAGGTGGGAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: YASIQVIPHGVQ*YMWVDMEGGRN Trigger: ATTTCTCCCACCTTCCATGTCCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CCA 72 bp | CACAAGAGTAGCCAAAAGTATTGCAATAAAGCAACTTaGGGTGGACTCAACTTGCAGGGGATTCAGATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HKSSQKYCNKAT*GGLNLQGIQIP Trigger: TGGGATCTGAATCCCCTGCAAGTTGAGTCCACCCCAAGTTGCTTTATTGCAATACTTTTGGCTACTCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CAA 72 bp | ATGAATGCCCACATTGTGGCTATAGGAGAGCAAAACTaGCCTTTAGTCAGAACATTCAGCTCTCAGGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: MNAHIVAIGEQN*PLVRTFSSQGS Trigger: GCTTCCCTGAGAGCTGAATGTTCTGACTAAAGGCAAGTTTTGCTCTCCTATAGCCACAATGTGGGCATTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443562.2 |
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| CDS CAA 72 bp | GGAGAGTGCCTGGAAGTCTGCCAGTCAAATTCATGTTaGATTCATTGGATAGTGACTAGGGTGAGACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GECLEVCQSNSC*IHWIVTRVRLE Trigger: CTCAAGTCTCACCCTAGTCACTATCCAATGAATCAAACATGAATTTGACTGGCAGACTTCCAGGCACTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CAA 72 bp | GGAAATCCAGCAAGGCCTGTCTGTTCAGATTTCTTCTaGGCCTTTCGATATAACATTCCTTCCTCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GNPARPVCSDFF*AFRYNIPSSQV Trigger: TACCTGGGAGGAAGGAATGTTATATCGAAAGGCCAAGAAGAAATCTGAACAGACAGGCCTTGCTGGATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CAA 90 bp | GTAAGGGCTTCTCTGCTTCATAGATGGTACCTTTTTGCTGTCTCTTaGCTGCATCTTCATATGGCAAAAGGGATAAGCTCCCTAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRASLLHRWYLFAVS*LHLHMAKGISSLKP Trigger: AGGCTTTAGGGAGCTTATCCCTTTTGCCATATGAAGATGCAGCAAAGAGACAGCAAAAAGGTACCATCTATGAAGCAGAGAAGCCCTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666079.1 |
||
| CDS CAA 90 bp | TCCATCCCTATCACAGTGCCAAAGAGTAATTGGATTATGGTGGCATaGATTGTAATGGAGAGAAGCACAAGGCATGGGAAAGGATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SIPITVPKSNWIMVA*IVMERSTRHGKGLS Trigger: GCTCAATCCTTTCCCATGCCTTGTGCTTCTCTCCATTACAATCAATGCCACCATAATCCAATTACTCTTTGGCACTGTGATAGGGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CAA 90 bp | GGTCAGAATGGAGAGTGCCTGGAAGTCTGCCAGTCAAATTCATGTTaGATTCATTGGATAGTGACTAGGGTGAGACTTGAGCTTGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GQNGECLEVCQSNSC*IHWIVTRVRLELES Trigger: ACTTTCAAGCTCAAGTCTCACCCTAGTCACTATCCAATGAATCAAACATGAATTTGACTGGCAGACTTCCAGGCACTCTCCATTCTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
||
| CDS TCA 72 bp | TATTCTTCTACTGTGTCTCCTATGCATCAATCCAAGTaGTTCCACATGGGGTACAGTGGTATATGTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSSTVSPMHQSK*FHMGYSGICGW Trigger: CCACCCACATATACCACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAGTAGAAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS TCA 72 bp | CAAGAATCTGGTGTCAGTAGTTTCTCTAGTAGAAAGTaGGCTCTACTACCCACCAAGACTCATAAGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QESGVSSFSSRK*ALLPTKTHKVG Trigger: CCCTACCTTATGAGTCTTGGTGGGTAGTAGAGCTCACTTTCTACTAGAGAAACTACTGACACCAGATTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
||
| CDS TCA 72 bp | TTTCCCAGAGACTCTCTAGGAATTTTTCCCATCTGCTaGCTAGGAGGTAAGCCCGGACCTAAATTTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPRDSLGIFPIC*LGGKPGPKFLS Trigger: AGACAAAAATTTAGGTCCGGGCTTACCTCCTAGTCAGCAGATGGGAAAAATTCCTAGAGAGTCTCTGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS GCA 72 bp | AGTATTGCAATAAAGCAACTTGGGGTGGACTCAACTTaGAGGGGATTCAGATCCCAGGTTTCCAAACCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SIAIKQLGVDST*RGFRSQVSKPF Trigger: AAAAGGTTTGGAAACCTGGGATCTGAATCCCCTGCAAGTTGAGTCCACCCCAAGTTGCTTTATTGCAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CCA 72 bp | GAAATCCAGCAAGGCCTGTCTGTTCAGATTTCTTCTTaGCCTTTCGATATAACATTCCTTCCTCCCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: EIQQGLSVQISS*PFDITFLPPRY Trigger: ATACCTGGGAGGAAGGAATGTTATATCGAAAGGCCAAGAAGAAATCTGAACAGACAGGCCTTGCTGGATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CAA 72 bp | ACCACCATCTCCTCTGGTACAAATTCAACTGCCATTTaGGGATCAAGTCCACATTTGACATTACCTCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTISSGTNSTAI*GSSPHLTLPLR Trigger: CCTGAGAGGTAATGTCAAATGTGGACTTGATCCCAAAATGGCAGTTGAATTTGTACCAGAGGAGATGGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS TCA 72 bp | AATTGGCTCCTGGTTTTTAGTAGCCTAGCCTGGAGTTaGGATACAAGAGGTAACGAGATAATTACCTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: NWLLVFSSLAWS*DTRGNEIITSR Trigger: CCTTGAGGTAATTATCTCGTTACCTCTTGTATCTCAACTCCAGGCTAGGCTACTAAAAACCAGGAGCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
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| CDS GCA 72 bp | ATGAGACCATTTAGTAAGGTGGGTCAGAATGGAGAGTaGCTGGAAGTCTGCCAGTCAAATTCATGTTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: MRPFSKVGQNGE*LEVCQSNSCLI Trigger: AATCAAACATGAATTTGACTGGCAGACTTCCAGGCACTCTCCATTCTGACCCACCTTACTAAATGGTCTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
||
| CDS GCA 72 bp | CATGTAAAGAGACAAATGAGAGCATGCCATGGTAAGTaGTGTGGTCACACAAGGAAGGAAGAGTTATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: HVKRQMRACHGK*CGHTRKEELYL Trigger: CAAGTATAACTCTTCCTTCCTTGTGTGACCACAGCACTTACCATGGCATGCTCTCATTTGTCTCTTTACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS GCA 72 bp | CCAATAGACCACCATCTCCTCTGGTACAAATTCAACTaGCATTTTGGGATCAAGTCCACATTTGACATTACC | + |
|
Preference number: 6 (lower is better) Translates to: PIDHHLLWYKFN*HFGIKSTFDIT Trigger: GGTAATGTCAAATGTGGACTTGATCCCAAAATGGCAGTTGAATTTGTACCAGAGGAGATGGTGGTCTATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS GCA 72 bp | ACACGTTTAAGTTTCCATAGCAACCAGCTCCCATCCTaGAGTTATCTAGGGGCTTTCCAAAAATTGCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TRLSFHSNQLPS*SYLGAFQKLLH Trigger: ATGAAGCAATTTTTGGAAAGCCCCTAGATAACTGCAGGATGGGAGCTGGTTGCTATGGAAACTTAAACGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS CCA 72 bp | GGTCCCCCATCTAAGAGACTATGGTTCAGAGTTGGATaGCCTATAGTTTCAAATGAAACCAGAAGACTTATG | + |
|
Preference number: 6 (lower is better) Translates to: GPPSKRLWFRVG*PIVSNETRRLM Trigger: CATAAGTCTTCTGGTTTCATTTGAAACTATAGGCCATCCAACTCTGAACCATAGTCTCTTAGATGGGGGACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
||
| CDS CCA 72 bp | GCAAGATCCATCCCTATCACAGTGCCAAAGAGTAATTaGATTATGGTGGCATTGATTGTAATGGAGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSIPITVPKSN*IMVALIVMERS Trigger: GCTTCTCTCCATTACAATCAATGCCACCATAATCCAATTACTCTTTGGCACTGTGATAGGGATGGATCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
||
| CDS CAA 72 bp | TCTCTGCTTCATAGATGGTACCTTTTTGCTGTCTCTTaGCTGCATCTTCATATGGCAAAAGGGATAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLHRWYLFAVS*LHLHMAKGISS Trigger: GGAGCTTATCCCTTTTGCCATATGAAGATGCAGCAAAGAGACAGCAAAAAGGTACCATCTATGAAGCAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666079.1 |
||
| CDS TCA 72 bp | ACTATGGTTCAGAGTTGGATGGCCTATAGTTTCAAATaGAACCAGAAGACTTATGTGCCCCTTAATCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TMVQSWMAYSFK*NQKTYVPLNQL Trigger: GAGCTGATTAAGGGGCACATAAGTCTTCTGGTTTCATTTGAAACTATAGGCCATCCAACTCTGAACCATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
||
| CDS TCA 72 bp | GCCTTGTACTTCTTTAAGACCCTCACTCAAGTTGACTaGTTGCTAATTCTACCAGTCCTTTACAGAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ALYFFKTLTQVD*LLILPVLYREL Trigger: AAGCTCTCTGTAAAGGACTGGTAGAATTAGCAATCAGTCAACTTGAGTGAGGGTCTTAAAGAAGTACAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
||
| CDS GCA 72 bp | TGGAATATGCCTCCATCGTTTATCCTTTTAGTACTTTaGCATCACAACATTAAACATGAGAGGGAGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: WNMPPSFILLVL*HHNIKHERESP Trigger: TGGGGACTCCCTCTCATGTTTAATGTTGTGATGGCAAAGTACTAAAAGGATAAACGATGGAGGCATATTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000443562.2 ENST00000655657.1 ENST00000660444.1 ENST00000666228.1 |
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| CDS GCA 72 bp | GATTTCTACTCTACTATTCTTCTACTGTGTCTCCTATaGATCAATCCAAGTGATTCCACATGGGGTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: DFYSTILLLCLL*INPSDSTWGTV Trigger: CACTGTACCCCATGTGGAATCACTTGGATTGATGCATAGGAGACACAGTAGAAGAATAGTAGAGTAGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CAA 72 bp | ACAAATTCAACTGCCATTTTGGGATCAAGTCCACATTaGACATTACCTCTCAGGCAACTTTCTGGGCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: TNSTAILGSSPH*TLPLRQLSGQK Trigger: CTTTTGCCCAGAAAGTTGCCTGAGAGGTAATGTCAAATGTGGACTTGATCCCAAAATGGCAGTTGAATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 72 bp | GTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTATCTGCCTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VNVFLFINMEGL*TPSFLVYLPFP Trigger: TGGAAAAGGCAGATAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655898.1 |
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| CDS CAA 72 bp | TCTCCTTCCTGGAGATGTGCTGAACTTCAAGCACATTaGCTTCAAAATGGTTTATTCTGGTTTGTGTGTATG | + |
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Preference number: 6 (lower is better) Translates to: SPSWRCAELQAH*LQNGLFWFVCM Trigger: CATACACACAAACCAGAATAAACCATTTTGAAGCAAATGTGCTTGAAGTTCAGCACATCTCCAGGAAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 72 bp | GTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTATACATCTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VNVFLFINMEGL*TPSFLVYTSAF Trigger: AAAGGCAGATGTATAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000526694.2 |
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| CDS TCA 72 bp | ATCCCAAATCTGAGGTGCTCCAAATTTTCTGAACACTaGCATAAGGCTTATAGGAAATTCTCATTGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: IPNLRCSKFSEH*HKAYRKFSLEH Trigger: ATGCTCCAATGAGAATTTCCTATAAGCCTTATGTCAGTGTTCAGAAAATTTGGAGCACCTCAGATTTGGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS TCA 72 bp | GTGAATGTGTTCTTGTTCATCAACATGGAAGGTCTCTaGACTCCATCCTTTTTGGTTTCTATAAAGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: VNVFLFINMEGL*TPSFLVSIKAS Trigger: TGATGCCTTTATAGAAACCAAAAAGGATGGAGTTCAGAGACCTTCCATGTTGATGAACAAGAACACATTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CAA 72 bp | CAGGATTCTTCAGAGCCTTTAACATATGAATATGCATaGTGCTTCTCCAAGGAGAGATGGTATGCAATATTC | + |
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Preference number: 6 (lower is better) Translates to: QDSSEPLTYEYA*CFSKERWYAIF Trigger: GAATATTGCATACCATCTCTCCTTGGAGAAGCACAATGCATATTCATATGTTAAAGGCTCTGAAGAATCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660444.1 |
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| CDS CAA 72 bp | CCTGCTGGTGGTTTTGGTTTAGAATGTAGATTTTACTaGCACTCTTACCAGGTAGGATCAACTGAAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: PAGGFGLECRFY*HSYQVGSTEIK Trigger: TTTGATTTCAGTTGATCCTACCTGGTAAGAGTGCAAGTAAAATCTACATTCTAAACCAAAACCACCAGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS GCA 72 bp | TTCCTTAGTAACGCAGTTATAGCAGTGATATTTAGGTaGAAAGAAGTCACTCCTGACAATACAAAACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FLSNAVIAVIFR*KEVTPDNTKLF Trigger: AAAAAGTTTTGTATTGTCAGGAGTGACTTCTTTGCACCTAAATATCACTGCTATAACTGCGTTACTAAGGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000526694.2 ENST00000655898.1 ENST00000666432.1 |
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| CDS CCA 72 bp | AAATATCTACTTCTGCTTCTATCACCAACCTGTACATaGTTAACTTGTAATTACACAGTCTTTAGTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: KYLLLLLSPTCT*LTCNYTVFSVR Trigger: TCTCACACTAAAGACTGTGTAATTACAAGTTAACCATGTACAGGTTGGTGATAGAAGCAGAAGTAGATATTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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| CDS CAA 72 bp | AGGATTTCAAAACTGTTGCTAAAGGTAGCATTTATCTaGCAGGTATTAATTCAGAAAGTGCTAATGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RISKLLLKVAFI*QVLIQKVLMVA Trigger: TGCAACCATTAGCACTTTCTGAATTAATACCTGCAAGATAAATGCTACCTTTAGCAACAGTTTTGAAATCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666432.1 |
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