RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC8B (Homo sapiens)

Ensembl gene IDs: ENSG00000197147

Ensembl transcript IDs: ENST00000330947.7, ENST00000439853.6, ENST00000639264.1, ENST00000640258.1

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTTACCCGTACGATTGCACAGCAACTATGGAAGAGAGAGGTAGATaGTTCGGCCACCCTCTCACAAGGAAACCCCCAAATACTTTAGGG +
Preference number: 1 (lower is better)
Translates to: FYPYDCTATMEERGR*FGHPLTRKPPNTLG
Trigger: CCCTAAAGTATTTGGGGGTTTCCTTGTGAGAGGGTGGCCGAATCATCTACCTCTCTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 90 bp ACTGCAGTGCACCACAGCACACCTATTGGAGCTATGCCACAGCACTaGGATACTGAGGATCTCTATTTACCCTGTTTAACACAATGTGAA +
Preference number: 1 (lower is better)
Translates to: TAVHHSTPIGAMPQH*DTEDLYLPCLTQCE
Trigger: TTCACATTGTGTTAAACAGGGTAAATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 90 bp GGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCATTTCATAGCTCCCAGTCCACCCTGG +
Preference number: 1 (lower is better)
Translates to: GKKRREYLYNLEGKH*KEEFSHFIAPSPPW
Trigger: CCAGGGTGGACTGGGAGCTATGAAATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 90 bp ATTTACGTAGGTGATAAGGAAAATTTAGCCAATGACTTCTGCAGTTaGACCAAACCAGTGACGAGCCATGGAGAAGTTCGTCAGGTGAAT +
Preference number: 1 (lower is better)
Translates to: IYVGDKENLANDFCS*TKPVTSHGEVRQVN
Trigger: ATTCACCTGACGAACTTCTCCATGGCTCGTCACTGGTTTGGTTCAACTGCAGAAGTCATTGGCTAAATTTTCCTTATCACCTACGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 90 bp GTGAAGAATGAAAAGATAGTATCTGTGTGCCACACAGATGTACCCTaGTGTAAGTTAGGAAAAGAACACTACTCCTTTACTGGAATGCTC +
Preference number: 1 (lower is better)
Translates to: VKNEKIVSVCHTDVP*CKLGKEHYSFTGML
Trigger: GAGCATTCCAGTAAAGGAGTAGTGTTCTTTTCCTAACTTACATCAGGGTACATCTGTGTGGCACACAGATACTATCTTTTCATTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 90 bp AAATTTTTCACTATCAAACAATGTTATGCAAATACATCACTGCAGTaGACCACAGCACACCTATTGGAGCTATGCCACAGCACTGAGATA +
Preference number: 1 (lower is better)
Translates to: KFFTIKQCYANTSLQ*TTAHLLELCHSTEI
Trigger: TATCTCAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCATAACATTGTTTGATAGTGAAAAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCAGGCTGGTGTACAGTaGCACAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSQAGVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGTACACCAGCCTG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTCAAGCAATTCCCCTaGGTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSFKQFP*VSLPSS
Trigger: GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTCCGTTTTAGGGACTaGCATCCTTCTAGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSFRFRD*HPSSSG
Trigger: TCCTGAACTAGAAGGATGTCAGTCCCTAAAACGGAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439853.6
3UTR-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTTCAAGCAATTCCCCTaGGTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCFKQFP*VSLPSS
Trigger: GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTTCAAGCAATTCCCCTaGGTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNFKQFP*VSLPSS
Trigger: GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR CAA 90 bp GTTCTAGGCAAAGGCCAAATGCAGGCATTTTCTCAGGGTTCATCATaGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTCAAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: VLGKGQMQAFSQGSS*VLRENQVKEDSSKL
Trigger: CAGCTTGCTTGAGTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGCCTGCATTTGGCCTTTGCCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCAGTCCACCCTGGATGTaGATTTCTTGCAACATCTCA +
Preference number: 2 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCSPPWM*ISCNIS
Trigger: TGAGATGTTGCAAGAAATGCACATCCAGGGTGGACT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCAGGCTGGTGTACAGTaGCACAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: HVQNLITCHTGISIHDNSQAGVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGTACACCAGCCTG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACAGGCTGGTGTACAGTaGCACAATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKQAGVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGTACACCAGCCTG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGTTGAACCAAACCAGTaGCGAGCCATGGAGAAGTTC +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWVEPNQ*RAMEKF
Trigger: GAACTTCTCCATGGCTCGTCACTGGTTTGGTTCAAC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTTTCAAGCAATTCCCCTaGGTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: HVQNLITCHTGISIHDNSFKQFP*VSLPSS
Trigger: GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAA...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGCTCCCAGTCCACCCTaGATGTGCATTTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: HVQNLITCHTGISIHDNSAPSPP*MCISCN
Trigger: GTTGCAAGAAATGCACATCCAGGGTGGACTGGGAGC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGCTCCCAGTCCACCCTaGATGTGCATTTCTTGCAAC +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKAPSPP*MCISCN
Trigger: GTTGCAAGAAATGCACATCCAGGGTGGACTGGGAGC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAATGACTTCTGCAGTTaGACCAAACCAGTGACGAGC +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWNDFCS*TKPVTS
Trigger: GCTCGTCACTGGTTTGGTTCAACTGCAGAAGTCATT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGCTATGCCACAGCACTaGGATACTGAGGATCTCTAT +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWAMPQH*DTEDLY
Trigger: ATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGATGCAAATACATCACTaGAGTGCACCACAGCACACC +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWMQIHH*SAPQHT
Trigger: GGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCAT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACCAGTGACGAGCCATaGAGAAGTTCGTCAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTSDEP*RSSSGE
Trigger: TTCACCTGACGAACTTCTCCATGGCTCGTCACTGGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACAGCACTGAGATACTaGGGATCTCTATTTACCCTG +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTALRY*GSLFTL
Trigger: CAGGGTAAATAGAGATCCTCAGTATCTCAGTGCTGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAGCCTCATTTTTCCTTaGATCAGGGCTACCTTGTCT +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWSLIFP*IRATLS
Trigger: AGACAAGGTAGCCCTGATGCAAGGAAAAATGAGGCT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAATACATCACTGCAGTaGACCACAGCACACCTATTG +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWNTSLQ*TTAHLL
Trigger: CAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNLEGKH*KEEFSH
Trigger: ATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDLEGKH*KEEFSH
Trigger: ATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTTTTACCCGTACGATTaGACAGCAACTATGGAAGAG +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWFYPYD*TATMEE
Trigger: CTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGAGAAGTTCGTCAGGTaGATGGTAGCAAATCTGAAT +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKEKFVR*MVANLN
Trigger: ATTCAGATTTGCTACCATTCACCTGACGAACTTCTC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATTTTACCCGTACGATTaGACAGCAACTATGGAAGAG +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKFYPYD*TATMEE
Trigger: CTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWLEGKH*KEEFSH
Trigger: ATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAGGGGAAGCTCTATTTaGTATGCTTTAAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKRGSSI*YALKTH
Trigger: GTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACTCCTTTACTGGAATaGTCAAAAACACTTAGGTTC +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTPLLE*SKTLRF
Trigger: GAACCTAAGTGTTTTTGAGCATTCCAGTAAAGGAGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCAAAACTTAATCACATaGCACACTGGAATCAGTATA +
Preference number: 2 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWQNLIT*HTGISI
Trigger: TATACTGATTCCAGTGTGGCATGTGATTAAGTTTTG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACAAAACTTAATCACATaGCACACTGGAATCAGTATA +
Preference number: 2 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKQNLIT*HTGISI
Trigger: TATACTGATTCCAGTGTGGCATGTGATTAAGTTTTG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 72 bp TACGATTGCACAGCAACTATGGAAGAGAGAGGTAGATaGTTCGGCCACCCTCTCACAAGGAAACCCCCAAAT +
Preference number: 3 (lower is better)
Translates to: YDCTATMEERGR*FGHPLTRKPPN
Trigger: ATTTGGGGGTTTCCTTGTGAGAGGGTGGCCGAATCATCTACCTCTCTCTTCCATAGTTGCTGTGCAATCGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 72 bp TCACTGCAGTGCACCACAGCACACCTATTGGAGCTATaGCACAGCACTGAGATACTGAGGATCTCTATTTAC +
Preference number: 3 (lower is better)
Translates to: SLQCTTAHLLEL*HSTEILRISIY
Trigger: GTAAATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 72 bp CACCACAGCACACCTATTGGAGCTATGCCACAGCACTaGGATACTGAGGATCTCTATTTACCCTGTTTAACA +
Preference number: 3 (lower is better)
Translates to: HHSTPIGAMPQH*DTEDLYLPCLT
Trigger: TGTTAAACAGGGTAAATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 72 bp GGTGATAAGGAAAATTTAGCCAATGACTTCTGCAGTTaGACCAAACCAGTGACGAGCCATGGAGAAGTTCGT +
Preference number: 3 (lower is better)
Translates to: GDKENLANDFCS*TKPVTSHGEVR
Trigger: ACGAACTTCTCCATGGCTCGTCACTGGTTTGGTTCAACTGCAGAAGTCATTGGCTAAATTTTCCTTATCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 72 bp ACTATCAAACAATGTTATGCAAATACATCACTGCAGTaGACCACAGCACACCTATTGGAGCTATGCCACAGC +
Preference number: 3 (lower is better)
Translates to: TIKQCYANTSLQ*TTAHLLELCHS
Trigger: GCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCATAACATTGTTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR CCA 72 bp ATTAAGAATTTTACCCGTACGATTGCACAGCAACTATaGAAGAGAGAGGTAGATGATTCGGCCACCCTCTCA +
Preference number: 3 (lower is better)
Translates to: IKNFTRTIAQQL*KREVDDSATLS
Trigger: TGAGAGGGTGGCCGAATCATCTACCTCTCTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAATTCTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 72 bp TTTTCACTATCAAACAATGTTATGCAAATACATCACTaGAGTGCACCACAGCACACCTATTGGAGCTATGCC +
Preference number: 3 (lower is better)
Translates to: FSLSNNVMQIHH*SAPQHTYWSYA
Trigger: GGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCATAACATTGTTTGATAGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCTGGATGTGCATTTCTaGCAACATCTCAATAAGTTA +
Preference number: 3 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLDVHF*QHLNKL
Trigger: TAACTTATTGAGATGTTGCAAGAAATGCACATCCAG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACATTTTACCCGTACGATaGCACAGCAACTATGGAAGA +
Preference number: 3 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNILPVR*HSNYGR
Trigger: TCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAAT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTGCATCAGGGCTACCTaGTCTCAAAAGCGACCTAAA +
Preference number: 3 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWCIRAT*SQKRPK
Trigger: TTTAGGTCGCTTTTGAGACAAGGTAGCCCTGATGCA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTGTGAGGCAGTGTGTTaGGTGTCCTATATTCCTGAT +
Preference number: 3 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWCEAVC*VSYIPD
Trigger: ATCAGGAATATAGGACACCAAACACACTGCCTCACA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 72 bp TGCAGGTTTTCACTGCTTCAGCTTTTCACATCCAGCTaGAAAGAAATAATTATATCGAGGGCATTCTGCAAC +
Preference number: 3 (lower is better)
Translates to: CRFSLLQLFTSS*KEIIISRAFCN
Trigger: GTTGCAGAATGCCCTCGATATAATTATTTCTTTTCAGCTGGATGTGAAAAGCTGAAGCAGTGAAAACCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGAGGGGAAGCTCTATTaGCTATGCTTTAAAGACTCA +
Preference number: 3 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWEGKLY*LCFKDS
Trigger: TGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR TCA 72 bp GAAAAGATAGTATCTGTGTGCCACACAGATGTACCCTaGTGTAAGTTAGGAAAAGAACACTACTCCTTTACT +
Preference number: 3 (lower is better)
Translates to: EKIVSVCHTDVP*CKLGKEHYSFT
Trigger: AGTAAAGGAGTAGTGTTCTTTTCCTAACTTACATCAGGGTACATCTGTGTGGCACACAGATACTATCTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR GCA 72 bp AGGAGAGAATACCTATACAATCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCATTTCATAGCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: RREYLYNLEGKH*KEEFSHFIAPS
Trigger: ACTGGGAGCTATGAAATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAATTTTACCCGTACGATaGCACAGCAACTATGGAAGA +
Preference number: 3 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKILPVR*HSNYGR
Trigger: TCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAAT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR-3UTR CAA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCTGGATGTGCATTTCTaGCAACATCTCAATAAGTTA +
Preference number: 3 (lower is better)
Translates to: HVQNLITCHTGISIHDNSLDVHF*QHLNKL
Trigger: TAACTTATTGAGATGTTGCAAGAAATGCACATCCAG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCCGCACTTTCCCGGCTaGCGGAGGCTGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSPHFPG*RRLRAQ
Trigger: CTGAGCCCGCAGCCTCCGGCAGCCGGGAAAGTGCGG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCGACCGGCTCCATTGTaGCGCGACGCGTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSRPAPL*RDAFRW
Trigger: CCAGCGGAACGCGTCGCGTCACAATGGAGCCGGTCG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330947.7
ENST00000439853.6
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCTGCTCTGCGTCAGCTaGAGAGCTCCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLLCVS*RAPAST
Trigger: CGTGCTGGCCGGAGCTCTCCAGCTGACGCAGAGCAG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCGGTGGAGGTCATTCTaGATTCGGAGGGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSRWRSF*IRRGSG
Trigger: TCCGCTCCCCCTCCGAATTCAGAATGACCTCCACCG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGCTTTCTATGCCAGCTaGCTCCAAACCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSAFYAS*LQTWLW
Trigger: CCACAGCCAGGTTTGGAGTCAGCTGGCATAGAAAGC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGTCTGTAACAACTTGTaGGATCCGGGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSVCNNL*DPGEAA
Trigger: AGCAGCCTCTCCCGGATCCCACAAGTTGTTACAGAC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCTGTGGGTAGGGCAATaGCTGTTTGCCGGAATCTAT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLWVGQ*LFAGIY
Trigger: ATAGATTCCGGCAAACAGTCATTGCCCTACCCACAG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGTCTACGACCAGAGATaGATGGTACACACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSVYDQR*MVHTKL
Trigger: GAGCTTCGTGTGTACCATTCATCTCTGGTCGTAGAC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGGACAGTTTCTGCAATaGAGGCAGGAGGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSGQFLQ*RQEVCN
Trigger: GTTACAGACCTCCTGCCTTCATTGCAGAAACTGTCC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTGGTGTTTTCACTCTaGGGATTCTGCGCGACTCCA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLVFSL*GFCATP
Trigger: TGGAGTCGCGCAGAATCCTCAGAGTGAAAACACCAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCCGCACTTTCCCGGCTaGCGGAGGCTGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCPHFPG*RRLRAQ
Trigger: CTGAGCCCGCAGCCTCCGGCAGCCGGGAAAGTGCGG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGGAGCATTTAGGAGGTaGTTAGGCTATGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSGAFRR*LGYEDS
Trigger: AGAGTCCTCATAGCCTAATCACCTCCTAAATGCTCC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACGACCAGAGATGAATaGTACACACGAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTTRDE*YTRSSL
Trigger: CAAGGAGCTTCGTGTGTACCATTCATCTCTGGTCGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTGAGATTCTTGAGGTaGAATACCCAGCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLRFLR*NTQRGI
Trigger: AATCCCACGCTGGGTATTTCACCTCAAGAATCTCAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCTGTGGATACAGAAGTaGTGGACAAGAAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLWIQK*WTRNRR
Trigger: CCTTCTGTTTCTTGTCCATCACTTCTGTATCCACAG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGATTGGTTTACCCTATaGATGCTGGTCAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSDWFTL*MLVNWN
Trigger: GTTCCAGTTGACCAGCATTCATAGGGTAAACCAATC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCCGCACTTTCCCGGCTaGCGGAGGCTGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNPHFPG*RRLRAQ
Trigger: CTGAGCCCGCAGCCTCCGGCAGCCGGGAAAGTGCGG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCAGTCCACCCTGGATGTaGATTTCTTGCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSSPPWM*ISCNIS
Trigger: TGAGATGTTGCAAGAAATGCACATCCAGGGTGGACT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCGACCGGCTCCATTGTaGCGCGACGCGTTCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNRPAPL*RDAFRW
Trigger: CCAGCGGAACGCGTCGCGTCACAATGGAGCCGGTCG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330947.7
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCAAAGAGATCACCTTCTaGCTTCTCACAGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSKEITF*LLTEEV
Trigger: AACCTCTTCTGTGAGAAGTCAGAAGGTGATCTCTTT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTGTCTTCATTCCTATaGATGCTGGTCAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLSSFL*MLVNWN
Trigger: GTTCCAGTTGACCAGCATTCATAGGAATGAAGACAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGAGAAGTTCGTCAGGTaGATGGTAGCAAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSEKFVR*MVANLN
Trigger: ATTCAGATTTGCTACCATTCACCTGACGAACTTCTC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACAGTTACATTGTCCTaGTTTGGGTACAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTVTLS*FGYRSA
Trigger: AGCTGATCTGTACCCAAAGCAGGACAATGTAACTGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGTGAGGCAGTGTGTTTaGTGTCCTATATTCCTGATA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSVRQCV*CPIFLI
Trigger: TATCAGGAATATAGGACACCAAACACACTGCCTCAC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACTGGGAGTGAAGAATaGAAAGATAGTATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTGSEE*KDSICV
Trigger: CACACAGATACTATCTTTTCATTCTTCACTCCCAGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACAGAAGGAAACCAGTaGAATAAGACTGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTEGNQ*NKTAGF
Trigger: AAAACCTGCAGTCTTATTTCACTGGTTTCCTTCTGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCTGCTCTGCGTCAGCTaGAGAGCTCCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDLLCVS*RAPAST
Trigger: CGTGCTGGCCGGAGCTCTCCAGCTGACGCAGAGCAG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCCGCACTTTCCCGGCTaGCGGAGGCTGCGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSPHFPG*RRLRAQ
Trigger: CTGAGCCCGCAGCCTCCGGCAGCCGGGAAAGTGCGG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACTCCTTTACTGGAATaGTCAAAAACACTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTPLLE*SKTLRF
Trigger: GAACCTAAGTGTTTTTGAGCATTCCAGTAAAGGAGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTCTCAATATTGTTGTTaGTCACAGCAAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSSQYCC*SQQSTA
Trigger: TGCAGTACTTTGCTGTGACCAACAACAATATTGAGA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCAAGAATCATTGTTGTTaGTCACAGCAAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSKNHCC*SQQSTA
Trigger: TGCAGTACTTTGCTGTGACCAACAACAATGATTCTT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTCAATCATCTCTCCTTaGAGAAGCACAATGCATATT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSSIISP*RSTMHI
Trigger: AATATGCATTGTGCTTCTCCAAGGAGAGATGATTGA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
3UTR CAA 72 bp GCAAATACATCACTGCAGTGCACCACAGCACACCTATaGGAGCTATGCCACAGCACTGAGATACTGAGGATC +
Preference number: 4 (lower is better)
Translates to: ANTSLQCTTAHL*ELCHSTEILRI
Trigger: GATCCTCAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGCTTTCTATGCCAGCTaGCTCCAAACCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCAFYAS*LQTWLW
Trigger: CCACAGCCAGGTTTGGAGTCAGCTGGCATAGAAAGC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCAAAACTTAATCACATaGCACACTGGAATCAGTATA +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSQNLIT*HTGISI
Trigger: TATACTGATTCCAGTGTGGCATGTGATTAAGTTTTG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTTCTCAATATTATTATaGTCCAAAGAGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSFSILL*SKESCS
Trigger: AGAGCAGCTCTCTTTGGACCATAATAATATTGAGAA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCTGCTCTGCGTCAGCTaGAGAGCTCCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSLLCVS*RAPAST
Trigger: CGTGCTGGCCGGAGCTCTCCAGCTGACGCAGAGCAG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACTGCTCTGCGTCAGCTaGAGAGCTCCGGCCAGCACG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKLLCVS*RAPAST
Trigger: CGTGCTGGCCGGAGCTCTCCAGCTGACGCAGAGCAG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCTGTGGGTAGGGCAATaGCTGTTTGCCGGAATCTAT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLWVGQ*LFAGIY
Trigger: ATAGATTCCGGCAAACAGTCATTGCCCTACCCACAG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACGCTTTCTATGCCAGCTaGCTCCAAACCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDAFYAS*LQTWLW
Trigger: CCACAGCCAGGTTTGGAGTCAGCTGGCATAGAAAGC...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGTCTACGACCAGAGATaGATGGTACACACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCVYDQR*MVHTKL
Trigger: GAGCTTCGTGTGTACCATTCATCTCTGGTCGTAGAC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGGTCTAGTAGGCAGCTaGAAACACAAACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCGLVGS*KHKLEP
Trigger: AGGCTCCAGTTTGTGTTTTCAGCTGCCTACTAGACC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACAGGTTAACTATTACCTaGGCGACTCCAGCCCCGGAC +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNRLTIT*ATPAPD
Trigger: GTCCGGGGCTGGAGTCGCGCAGGTAATAGTTAACCT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330947.7
ENST00000639264.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCAGGCTGGTGTACAGTaGCACAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDQAGVQ*HNLGSL
Trigger: CAGTGAGCCGAGATTGTGCCACTGTACACCAGCCTG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCGGTGGAGGTCATTCTaGATTCGGAGGGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSRWRSF*IRRGSG
Trigger: TCCGCTCCCCCTCCGAATTCAGAATGACCTCCACCG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACGAAGAGAGAGGTAGATaGTTCGGCCACCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNEERGR*FGHPLT
Trigger: TGTGAGAGGGTGGCCGAATCATCTACCTCTCTCTTC...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGGACTCTGCCCTCAATaGTGGGATTTAGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCGLCPQ*WDLVPY
Trigger: ATAAGGCACTAAATCCCATCATTGAGGGCAGAGTCC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTTCAAGCAATTCCCCTaGGTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDFKQFP*VSLPSS
Trigger: GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAA...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCACCTATTGGAGCTATaGCACAGCACTGAGATACTG +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCHLLEL*HSTEIL
Trigger: CAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCACGACCAGAGATGAATaGTACACACGAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCTTRDE*YTRSSL
Trigger: CAAGGAGCTTCGTGTGTACCATTCATCTCTGGTCGT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCCACAGCACACCTATTaGAGCTATGCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDPQHTY*SYATAL
Trigger: CAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCAGTCTCCAGAGCTGTaGGCCATCCAGGTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWQSPEL*AIQVVR
Trigger: CCTCACTACCTGGATGGCCCACAGCTCTGGAGACTG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGCTTTCTATGCCAGCTaGCTCCAAACCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWAFYAS*LQTWLW
Trigger: CCACAGCCAGGTTTGGAGTCAGCTGGCATAGAAAGC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTTCCGTTTTAGGGACTaGCATCCTTCTAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCFRFRD*HPSSSG
Trigger: TCCTGAACTAGAAGGATGTCAGTCCCTAAAACGGAA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCAGCCTCATTTTTCCTTaGATCAGGGCTACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCSLIFP*IRATLS
Trigger: AGACAAGGTAGCCCTGATGCAAGGAAAAATGAGGCT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCAAAATGCTCGAGCCTaGAACTGGTACTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDQNARA*NWYWGS
Trigger: ACTACCCCAGTACCAGTTCCAGGCTCGAGCATTTTG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACACCAGTGACGAGCCATaGAGAAGTTCGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDTSDEP*RSSSGE
Trigger: TTCACCTGACGAACTTCTCCATGGCTCGTCACTGGT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR CAA 72 bp AGTAGTAGCCTCATTTTTCCTTGCATCAGGGCTACCTaGTCTCAAAAGCGACCTAAACACTGGTGTATAAGG +
Preference number: 4 (lower is better)
Translates to: SSSLIFPCIRAT*SQKRPKHWCIR
Trigger: CCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGCCCTGATGCAAGGAAAAATGAGGCTACTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTTGTCTTCATTCCTATaGATGCTGGTCAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLSSFL*MLVNWN
Trigger: GTTCCAGTTGACCAGCATTCATAGGAATGAAGACAA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330947.7
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGAAGAGAGAGGTAGATaGTTCGGCCACCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWEERGR*FGHPLT
Trigger: TGTGAGAGGGTGGCCGAATCATCTACCTCTCTCTTC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAATGACTTCTGCAGTTaGACCAAACCAGTGACGAGC +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDNDFCS*TKPVTS
Trigger: GCTCGTCACTGGTTTGGTTCAACTGCAGAAGTCATT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACAATGACTTCTGCAGTTaGACCAAACCAGTGACGAGC +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNNDFCS*TKPVTS
Trigger: GCTCGTCACTGGTTTGGTTCAACTGCAGAAGTCATT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACCAAGGGCTAAGGCATTaGCTGCTATGGTTTGGATGT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDQGLRH*LLWFGC
Trigger: ACATCCAAACCATAGCAGTCAATGCCTTAGCCCTTG...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTTTTACCCGTACGATTaGACAGCAACTATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCFYPYD*TATMEE
Trigger: CTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCACCTATTGGAGCTATaGCACAGCACTGAGATACTG +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNHLLEL*HSTEIL
Trigger: CAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACATGCAAATACATCACTaGAGTGCACCACAGCACACC +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDMQIHH*SAPQHT
Trigger: GGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCAT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACACGACCAGAGATGAATaGTACACACGAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDTTRDE*YTRSSL
Trigger: CAAGGAGCTTCGTGTGTACCATTCATCTCTGGTCGT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGTCTGTAACAACTTGTaGGATCCGGGAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWVCNNL*DPGEAA
Trigger: AGCAGCCTCTCCCGGATCCCACAAGTTGTTACAGAC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGCTCCCAGTCCACCCTaGATGTGCATTTCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWAPSPP*MCISCN
Trigger: GTTGCAAGAAATGCACATCCAGGGTGGACTGGGAGC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCTGTGGGTAGGGCAATaGCTGTTTGCCGGAATCTAT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWLWVGQ*LFAGIY
Trigger: ATAGATTCCGGCAAACAGTCATTGCCCTACCCACAG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTTGAGATTCTTGAGGTaGAATACCCAGCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDLRFLR*NTQRGI
Trigger: AATCCCACGCTGGGTATTTCACCTCAAGAATCTCAA...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGGACAGTTTCTGCAATaGAGGCAGGAGGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWGQFLQ*RQEVCN
Trigger: GTTACAGACCTCCTGCCTTCATTGCAGAAACTGTCC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTTCCGTTTTAGGGACTaGCATCCTTCTAGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNFRFRD*HPSSSG
Trigger: TCCTGAACTAGAAGGATGTCAGTCCCTAAAACGGAA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGAAGAGAGAGGTAGATaGTTCGGCCACCCTCTCACA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSEERGR*FGHPLT
Trigger: TGTGAGAGGGTGGCCGAATCATCTACCTCTCTCTTC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCATAAACAATAATGTGTaGGGCAGTGTGTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCINNNV*GSVFGV
Trigger: GACACCAAACACACTGCCTCACACATTATTGTTTAT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGGAAAATTTAGCCAATaGCTTCTGCAGTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCGKFSQ*LLQLNQ
Trigger: TTGGTTCAACTGCAGAAGTCATTGGCTAAATTTTCC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCACACAGATGTACCCTaGTGTAAGTTAGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCHTDVP*CKLGKE
Trigger: TTCTTTTCCTAACTTACATCAGGGTACATCTGTGTG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGAAATTAAACTCAACTaGAAGCCATCTCGACTCAGT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCEIKLN*KPSRLS
Trigger: ACTGAGTCGAGATGGCTTTCAGTTGAGTTTAATTTC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCTTCAGAATTCATGTTaGAGCTTAATCCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLQNSC*SLILSA
Trigger: TGCACTGAGGATTAAGCTTCAACATGAATTCTGAAG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAGTCCACCCTGGATGTaGATTTCTTGCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDSPPWM*ISCNIS
Trigger: TGAGATGTTGCAAGAAATGCACATCCAGGGTGGACT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACAATACATCACTGCAGTaGACCACAGCACACCTATTG +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNNTSLQ*TTAHLL
Trigger: CAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAATACATCACTGCAGTaGACCACAGCACACCTATTG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDNTSLQ*TTAHLL
Trigger: CAATAGGTGTGCTGTGGTGCACTGCAGTGATGTATT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACCAGTGACGAGCCATaGAGAAGTTCGTCAGGTGAA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTSDEP*RSSSGE
Trigger: TTCACCTGACGAACTTCTCCATGGCTCGTCACTGGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACCACAGCACACCTATTaGAGCTATGCCACAGCACTG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKPQHTY*SYATAL
Trigger: CAGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAGTGCGGTAGGTGAGTaGAGAAGGAAAACAACATAC +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDSAVGE*RRKTTY
Trigger: GTATGTTGTTTTCCTTCTCCACTCACCTACCGCACT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
3UTR CAA 72 bp AAAGGCCAAATGCAGGCATTTTCTCAGGGTTCATCATaGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: KGQMQAFSQGSS*VLRENQVKEDS
Trigger: TGAGTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGCCTGCATTTGGCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGTCTACGACCAGAGATaGATGGTACACACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKVYDQR*MVHTKL
Trigger: GAGCTTCGTGTGTACCATTCATCTCTGGTCGTAGAC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGTCTACGACCAGAGATaGATGGTACACACGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSVYDQR*MVHTKL
Trigger: GAGCTTCGTGTGTACCATTCATCTCTGGTCGTAGAC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGGACAGTTTCTGCAATaGAGGCAGGAGGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSGQFLQ*RQEVCN
Trigger: GTTACAGACCTCCTGCCTTCATTGCAGAAACTGTCC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACGAGAAGTTCGTCAGGTaGATGGTAGCAAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDEKFVR*MVANLN
Trigger: ATTCAGATTTGCTACCATTCACCTGACGAACTTCTC...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGTTGAACCAAACCAGTaGCGAGCCATGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKVEPNQ*RAMEKF
Trigger: GAACTTCTCCATGGCTCGTCACTGGTTTGGTTCAAC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGTTGAACCAAACCAGTaGCGAGCCATGGAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSVEPNQ*RAMEKF
Trigger: GAACTTCTCCATGGCTCGTCACTGGTTTGGTTCAAC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCAT +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLEGKH*KEEFSH
Trigger: ATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTTTTACCCGTACGATTaGACAGCAACTATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDFYPYD*TATMEE
Trigger: CTCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAA...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCACTCCTTTACTGGAATaGTCAAAAACACTTAGGTTC +
Preference number: 4 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCTPLLE*SKTLRF
Trigger: GAACCTAAGTGTTTTTGAGCATTCCAGTAAAGGAGT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACACAGTTACATTGTCCTaGTTTGGGTACAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDTVTLS*FGYRSA
Trigger: AGCTGATCTGTACCCAAAGCAGGACAATGTAACTGT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACGTGAGGCAGTGTGTTTaGTGTCCTATATTCCTGATA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNVRQCV*CPIFLI
Trigger: TATCAGGAATATAGGACACCAAACACACTGCCTCAC...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACGGAAAATTTAGCCAATaGCTTCTGCAGTTGAACCAA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNGKFSQ*LLQLNQ
Trigger: TTGGTTCAACTGCAGAAGTCATTGGCTAAATTTTCC...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCACACAGATGTACCCTaGTGTAAGTTAGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNHTDVP*CKLGKE
Trigger: TTCTTTTCCTAACTTACATCAGGGTACATCTGTGTG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACACTGGGAGTGAAGAATaGAAAGATAGTATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNTGSEE*KDSICV
Trigger: CACACAGATACTATCTTTTCATTCTTCACTCCCAGT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGCTATGCCACAGCACTaGGATACTGAGGATCTCTAT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKAMPQH*DTEDLY
Trigger: ATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGCTATGCCACAGCACTaGGATACTGAGGATCTCTAT +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSAMPQH*DTEDLY
Trigger: ATAGAGATCCTCAGTATCTCAGTGCTGTGGCATAGC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCTGTGGATACAGAAGTaGTGGACAAGAAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWLWIQK*WTRNRR
Trigger: CCTTCTGTTTCTTGTCCATCACTTCTGTATCCACAG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACGAAATTAAACTCAACTaGAAGCCATCTCGACTCAGT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDEIKLN*KPSRLS
Trigger: ACTGAGTCGAGATGGCTTTCAGTTGAGTTTAATTTC...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTTTACCAAAAGCTACTaGATCTGTGGCAAAGGGATT +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNFTKSY*ICGKGI
Trigger: AATCCCTTTGCCACAGATTCAGTAGCTTTTGGTAAA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACTTTACCAAAAGCTACTaGATCTGTGGCAAAGGGATT +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDFTKSY*ICGKGI
Trigger: AATCCCTTTGCCACAGATTCAGTAGCTTTTGGTAAA...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCCTTATAAAAGGGCTTaGAGGGGTAAGTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWPYKRA*RGKFSP
Trigger: AGGAGAGAACTTACCCCTTCAAGCCCTTTTATAAGG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR GCA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAGGGGAAGCTCTATTTaGTATGCTTTAAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDRGSSI*YALKTH
Trigger: GTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCACCTATTGGAGCTATaGCACAGCACTGAGATACTG +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSHLLEL*HSTEIL
Trigger: CAGTATCTCAGTGCTGTGGCATAGCTCCAATAGGTG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAATGCAAATACATCACTaGAGTGCACCACAGCACACC +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKMQIHH*SAPQHT
Trigger: GGTGTGCTGTGGTGCACTGCAGTGATGTATTTGCAT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTTCCTTCCGTCCCTGTTaGTTTTCTACTCCTACACCA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSSFRPC*FSTPTP
Trigger: TGGTGTAGGAGTAGAAAAGCAACAGGGACGGAAGGA...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAGTGCGGTAGGTGAGTaGAGAAGGAAAACAACATAC +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWSAVGE*RRKTTY
Trigger: GTATGTTGTTTTCCTTCTCCACTCACCTACCGCACT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAAAGAGATCACCTTCTaGCTTCTCACAGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWKEITF*LLTEEV
Trigger: AACCTCTTCTGTGAGAAGTCAGAAGGTGATCTCTTT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATTGAGATTCTTGAGGTaGAATACCCAGCGTGGGATT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKLRFLR*NTQRGI
Trigger: AATCCCACGCTGGGTATTTCACCTCAAGAATCTCAA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACAGCACTGAGATACTaGGGATCTCTATTTACCCTG +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTALRY*GSLFTL
Trigger: CAGGGTAAATAGAGATCCTCAGTATCTCAGTGCTGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACTTCATTCTTTCAAATaGCAGGCAGACAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKLHSFK*QADSRD
Trigger: GTCTCTGCTGTCTGCCTGTCATTTGAAAGAATGAAG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTAGTCCACCCTGGATGTaGATTTCTTGCAACATCTCA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSSPPWM*ISCNIS
Trigger: TGAGATGTTGCAAGAAATGCACATCCAGGGTGGACT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTAGCCTCATTTTTCCTTaGATCAGGGCTACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSSLIFP*IRATLS
Trigger: AGACAAGGTAGCCCTGATGCAAGGAAAAATGAGGCT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAGCCTCATTTTTCCTTaGATCAGGGCTACCTTGTCT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKSLIFP*IRATLS
Trigger: AGACAAGGTAGCCCTGATGCAAGGAAAAATGAGGCT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACTGCAGGTTTTCACTaGTTCAGCTTTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTAGFH*FSFSHP
Trigger: TGGATGTGAAAAGCTGAAGCAGTGAAAACCTGCAGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGTGAGGCAGTGTGTTTaGTGTCCTATATTCCTGATA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWVRQCV*CPIFLI
Trigger: TATCAGGAATATAGGACACCAAACACACTGCCTCAC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTAGTGCGGTAGGTGAGTaGAGAAGGAAAACAACATAC +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSSAVGE*RRKTTY
Trigger: GTATGTTGTTTTCCTTCTCCACTCACCTACCGCACT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACAAACTGGAGCCTGTTaGTGTTTTCACTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKQTGAC*CFHSED
Trigger: ATCCTCAGAGTGAAAACACCAACAGGCTCCAGTTTG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAAAGAGATCACCTTCTaGCTTCTCACAGAAGAGGTT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKKEITF*LLTEEV
Trigger: AACCTCTTCTGTGAGAAGTCAGAAGGTGATCTCTTT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGGAAATTAAACTCAACTaGAAGCCATCTCGACTCAGT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWEIKLN*KPSRLS
Trigger: ACTGAGTCGAGATGGCTTTCAGTTGAGTTTAATTTC...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTTTACCAAAAGCTACTaGATCTGTGGCAAAGGGATT +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWFTKSY*ICGKGI
Trigger: AATCCCTTTGCCACAGATTCAGTAGCTTTTGGTAAA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGATGGCCTTTCTGAATaGACAAAGCCTCCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKDGLSE*TKPPRN
Trigger: ATTTCTTGGAGGCTTTGTTCATTCAGAAAGGCCATC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR GCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGAGGGGAAGCTCTATTTaGTATGCTTTAAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWRGSSI*YALKTH
Trigger: GTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCAAAACTTAATCACATaGCACACTGGAATCAGTATA +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNQNLIT*HTGISI
Trigger: TATACTGATTCCAGTGTGGCATGTGATTAAGTTTTG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACAGTTACATTGTCCTaGTTTGGGTACAGATCAGCT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTVTLS*FGYRSA
Trigger: AGCTGATCTGTACCCAAAGCAGGACAATGTAACTGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACTGCAGGTTTTCACTaGTTCAGCTTTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTAGFH*FSFSHP
Trigger: TGGATGTGAAAAGCTGAAGCAGTGAAAACCTGCAGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACGCTAGCTTTCACTCTTaGACTAACCAAATAAAATGT +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNASFHS*TNQIKC
Trigger: ACATTTTATTTGGTTAGTGCAAGAGTGAAAGCTAGC...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTTCTCAATATTATTATaGTCCAAAGAGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNFSILL*SKESCS
Trigger: AGAGCAGCTCTCTTTGGACCATAATAATATTGAGAA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTATAAACAATAATGTGTaGGGCAGTGTGTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSINNNV*GSVFGV
Trigger: GACACCAAACACACTGCCTCACACATTATTGTTTAT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTCACACAGATGTACCCTaGTGTAAGTTAGGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSHTDVP*CKLGKE
Trigger: TTCTTTTCCTAACTTACATCAGGGTACATCTGTGTG...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACTGGGAGTGAAGAATaGAAAGATAGTATCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTGSEE*KDSICV
Trigger: CACACAGATACTATCTTTTCATTCTTCACTCCCAGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACAGAAGGAAACCAGTaGAATAAGACTGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTEGNQ*NKTAGF
Trigger: AAAACCTGCAGTCTTATTTCACTGGTTTCCTTCTGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACAGAAGGAAACCAGTaGAATAAGACTGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTEGNQ*NKTAGF
Trigger: AAAACCTGCAGTCTTATTTCACTGGTTTCCTTCTGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTCTCAATATTGTTGTTaGTCACAGCAAAGTACTGCA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWSQYCC*SQQSTA
Trigger: TGCAGTACTTTGCTGTGACCAACAACAATATTGAGA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGCAATGTACAGTTACTaGAAACAAAGCAGATCTACA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSAMYSY*KQSRST
Trigger: TGTAGATCTGCTTTGTTTTCAGTAACTGTACATTGC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR TCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGCAATGTACAGTTACTaGAAACAAAGCAGATCTACA +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKAMYSY*KQSRST
Trigger: TGTAGATCTGCTTTGTTTTCAGTAACTGTACATTGC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACTTGAAGGTAAACACTaGAAGGAGGAATTTAGTCAT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKLEGKH*KEEFSH
Trigger: ATGACTAAATTCCTCCTTGCAGTGTTTACCTTCAAG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACACTACTCCTTTACTaGAATGCTCAAAAACACTTA +
Preference number: 4 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTLLLY*NAQKHL
Trigger: TAAGTGTTTTTGAGCATTCCAGTAAAGGAGTAGTGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR GCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGCTAGCTTTCACTCTTaGACTAACCAAATAAAATGT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKASFHS*TNQIKC
Trigger: ACATTTTATTTGGTTAGTGCAAGAGTGAAAGCTAGC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATTCTCAATATTATTATaGTCCAAAGAGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKFSILL*SKESCS
Trigger: AGAGCAGCTCTCTTTGGACCATAATAATATTGAGAA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACACTACTCCTTTACTaGAATGCTCAAAAACACTTA +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTLLLY*NAQKHL
Trigger: TAAGTGTTTTTGAGCATTCCAGTAAAGGAGTAGTGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACACTACTCCTTTACTaGAATGCTCAAAAACACTTA +
Preference number: 4 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTLLLY*NAQKHL
Trigger: TAAGTGTTTTTGAGCATTCCAGTAAAGGAGTAGTGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CCA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAAAGAATCTCAAAGTTaGAAGATGGCCTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKKESQS*KMAFLN
Trigger: ATTCAGAAAGGCCATCTTCCAACTTTGAGATTCTTT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
34% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTACACACGAAGCTCCTaGAGGTTGACCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSYTRSS*RLTSCE
Trigger: CTCACAGCTGGTCAACCTCAAGGAGCTTCGTGTGTA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTGCATCAGGGCTACCTaGTCTCAAAAGCGACCTAAA +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSCIRAT*SQKRPK
Trigger: TTTAGGTCGCTTTTGAGACAAGGTAGCCCTGATGCA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGGCTCTGAAGAATCATaGTTGTTGGTCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSGSEES*LLVTAK
Trigger: CTTTGCTGTGACCAACAACAATGATTCTTCAGAGCC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGGTAGCATCTCAATATaGTTGTTGGTCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSGSISI*LLVTAK
Trigger: CTTTGCTGTGACCAACAACAATATTGAGATGCTACC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTCTCAGGGTTCATCATaGGTGTTAAGAGAAAACCAG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSSQGSS*VLRENQ
Trigger: CTGGTTTTCTCTTAACACCAATGATGAACCCTGAGA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGAGGGGAAGCTCTATTaGCTATGCTTTAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSEGKLY*LCFKDS
Trigger: TGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCAGATCTACAGTTACATaGTCCTGCTTTGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSRSTVT*SCFGYR
Trigger: TCTGTACCCAAAGCAGGACAATGTAACTGTAGATCT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCGAAGAATCATTGTTGTaGGTCACAGCAAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSEESLL*VTAKYC
Trigger: GCAGTACTTTGCTGTGACCAACAACAATGATTCTTC...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCCTCAATCATCTCTCCTaGGAGAAGCACAATGCATAT +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSLNHLS*EKHNAY
Trigger: ATATGCATTGTGCTTCTCCAAGGAGAGATGATTGAG...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTGTCTCTATTCCAGATaGGCCCATTATTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSCLYSR*AHYFTK
Trigger: CTTAGTGAAATAATGGGCCAATCTGGAATAGAGACA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCTCTGAAGAATCATTGTaGTTGGTCACAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSSEESL*LVTAKY
Trigger: GTACTTTGCTGTGACCAACAACAATGATTCTTCAGA...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS-3UTR CAA 90 bp CAACCTCCACCTCCCTGGTTCAAGCAATTCCCCTGCGTCAGCCTCCCAAGTAGCACCATCTTTTTCAAGTaGTTCAACACAACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: QPPPPWFKQFPCVSLPSSTIFFK*FNTTSL
Trigger: CAAACTGGTTGTGTTGAACAACTTGAAAAAGATGGT...GCTACTTGGGAGGCTGACGCAGGGGAATTGCTTGAACCAGGGAGGTGGAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000330947.7
ENST00000439853.6
ENST00000639264.1
ENST00000640258.1
CDS TCA 90 bp CTCCTACACCATGTTCAACGTCCAGAAATCAAATCTGTAGTATCTTaGTCTTGGACCTTCCAGTCTCCAGAGCTGTGGGCCATCCAGGTA +
Preference number: 5 (lower is better)
Translates to: LLHHVQRPEIKSVVS*SWTFQSPELWAIQV
Trigger: TACCTGGATGGCCCACAGCTCTGGAGACTGGAAGGTCCAAGATCAAGATACTACAGATTTGATTTCTGGACGTTGAACATGGTGTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTACACACGAAGCTCCTaGAGGTTGACCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCYTRSS*RLTSCE
Trigger: CTCACAGCTGGTCAACCTCAAGGAGCTTCGTGTGTA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCTCCTTCCGTCCCTGTaGCTTTTCTACTCCTACACC +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCLLPSL*LFYSYT
Trigger: GGTGTAGGAGTAGAAAAGCAACAGGGACGGAAGGAG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACGAGGTCTGTAACAACTaGTGGGATCCGGGAGAGGCT +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNEVCNN*WDPGEA
Trigger: AGCCTCTCCCGGATCCCACAAGTTGTTACAGACCTC...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS CCA 90 bp GACAGGCAGACAGCAGAGACCAAGTGGACGAAAGAATCTCAAAGTTaGAAGATGGCCTTTCTGAATGAACAAAGCCTCCAAGAAATATGG +
Preference number: 5 (lower is better)
Translates to: DRQTAETKWTKESQS*KMAFLNEQSLQEIW
Trigger: CCATATTTCTTGGAGGCTTTGTTCATTCAGAAAGGCCATCTTCCAACTTTGAGATTCTTTCGTCCACTTGGTCTCTGCTGTCTGCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTACACACGAAGCTCCTaGAGGTTGACCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNYTRSS*RLTSCE
Trigger: CTCACAGCTGGTCAACCTCAAGGAGCTTCGTGTGTA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACACCACAGCACACCTATaGGAGCTATGCCACAGCACT +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNTTAHL*ELCHST
Trigger: AGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTGTGAGGCAGTGTGTTaGGTGTCCTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCCEAVC*VSYIPD
Trigger: ATCAGGAATATAGGACACCAAACACACTGCCTCACA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTCCCCGAATCTCAGGTaGATAGCAACATCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNSPNLR*IATSRA
Trigger: AGCCCTTGATGTTGCTATCAACCTGAGATTCGGGGA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCGGTAGCATCTCAATATaGTTGTTGGTCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCGSISI*LLVTAK
Trigger: CTTTGCTGTGACCAACAACAATATTGAGATGCTACC...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCATTTTACCCGTACGATaGCACAGCAACTATGGAAGA +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCILPVR*HSNYGR
Trigger: TCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAAT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGACCACAGCACACCTATaGGAGCTATGCCACAGCACT +
Preference number: 5 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWTTAHL*ELCHST
Trigger: AGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTTACACACGAAGCTCCTaGAGGTTGACCAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HVQNLITCHTGISIHDNSYTRSS*RLTSCE
Trigger: CTCACAGCTGGTCAACCTCAAGGAGCTTCGTGTGTA...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCAGCATCTCAATATTGTaGTTGGTCACAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCSISIL*LVTAKY
Trigger: GTACTTTGCTGTGACCAACAACAATATTGAGATGCT...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTGTGAGGCAGTGTGTTaGGTGTCCTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNCEAVC*VSYIPD
Trigger: ATCAGGAATATAGGACACCAAACACACTGCCTCACA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACCACAGCACACCTATaGGAGCTATGCCACAGCACT +
Preference number: 5 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTTAHL*ELCHST
Trigger: AGTGCTGTGGCATAGCTCCAATAGGTGTGCTGTGGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTGTCTCTATTCCAGATaGGCCCATTATTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCCLYSR*AHYFTK
Trigger: CTTAGTGAAATAATGGGCCAATCTGGAATAGAGACA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCTCTTCAGAATTCATGTaGAAGCTTAATCCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCSSEFM*KLNPQC
Trigger: GCACTGAGGATTAAGCTTCAACATGAATTCTGAAGA...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS CCA 90 bp AGGTTGATAGCAACATCAAGGGCTAAGGCATTGACTGCTATGGTTTaGATGTTTGTGTCCTCTTCAGAATTCATGTTGAAGCTTAATCCT +
Preference number: 5 (lower is better)
Translates to: RLIATSRAKALTAMV*MFVSSSEFMLKLNP
Trigger: AGGATTAAGCTTCAACATGAATTCTGAAGAGGACACAAACATCCAAACCATAGCAGTCAATGCCTTAGCCCTTGATGTTGCTATCAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACTCTCAGGGTTCATCATaGGTGTTAAGAGAAAACCAG +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNSQGSS*VLRENQ
Trigger: CTGGTTTTCTCTTAACACCAATGATGAACCCTGAGA...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACATTTTACCCGTACGATaGCACAGCAACTATGGAAGA +
Preference number: 5 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDILPVR*HSNYGR
Trigger: TCTTCCATAGTTGCTGTGCAATCGTACGGGTAAAAT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GACTGGGGGAAGAAGAGGAGAGAATACCTATACAATCTTGAAGGTAAACACTGCCATGCTCAAATATCATaGCAAATCTTCTGGCACAAA +
Preference number: 5 (lower is better)
Translates to: DWGKKRREYLYNLEGKHCHAQIS*QIFWHK
Trigger: TTTGTGCCAGAAGATTTGCAATGATATTTGAGCATG...GCAGTGTTTACCTTCAAGATTGTATAGGTATTCTCTCCTCTTCTTCCCCCAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAGATCTACAGTTACATaGTCCTGCTTTGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDRSTVT*SCFGYR
Trigger: TCTGTACCCAAAGCAGGACAATGTAACTGTAGATCT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACATCTCAATATTGTTGTaGGTCACAGCAAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNISILL*VTAKYC
Trigger: GCAGTACTTTGCTGTGACCAACAACAATATTGAGAT...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACAGCATCTCAATATTGTaGTTGGTCACAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDSISIL*LVTAKY
Trigger: GTACTTTGCTGTGACCAACAACAATATTGAGATGCT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATGCATCAGGGCTACCTaGTCTCAAAAGCGACCTAAA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKCIRAT*SQKRPK
Trigger: TTTAGGTCGCTTTTGAGACAAGGTAGCCCTGATGCA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCATTTTCTCAGGGTTCATCATTGGTGTTAAGAGAAAACCAGGTTAAGGAAGACACCATCTTTTTCAAGTaGTTCAACACAACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: AFSQGSSLVLRENQVKEDTIFFK*FNTTSL
Trigger: CAAACTGGTTGTGTTGAACAACTTGAAAAAGATGGT...GTCTTCCTTAACCTGGTTTTCTCTTAACACCAATGATGAACCCTGAGAAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GAGGGGAAGCTCTATTTGCTATGCTTTAAAGACTCACTTTCATCTTTCTGGAACCTGGATGTGCATTTCTaGCAACATCTCAATAAGTTA +
Preference number: 5 (lower is better)
Translates to: EGKLYLLCFKDSLSSFWNLDVHF*QHLNKL
Trigger: TAACTTATTGAGATGTTGCAAGAAATGCACATCCAG...GTTCCAGAAAGATGAAAGTGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATGTGAGGCAGTGTGTTaGGTGTCCTATATTCCTGAT +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKCEAVC*VSYIPD
Trigger: ATCAGGAATATAGGACACCAAACACACTGCCTCACA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAATGTAGTATCTTGATCTaGGACCTTCCAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKCSILI*DLPVSR
Trigger: TCTGGAGACTGGAAGGTCCAAGATCAAGATACTACA...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGATCTCAATATTGTTGTaGGTCACAGCAAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWISILL*VTAKYC
Trigger: GCAGTACTTTGCTGTGACCAACAACAATATTGAGAT...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGGTAGCATCTCAATATaGTTGTTGGTCACAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKGSISI*LLVTAK
Trigger: CTTTGCTGTGACCAACAACAATATTGAGATGCTACC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTGAGGGGAAGCTCTATTaGCTATGCTTTAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: HVQNLITCHTGISIHDNSEGKLY*LCFKDS
Trigger: TGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAGAGGGGAAGCTCTATTaGCTATGCTTTAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKEGKLY*LCFKDS
Trigger: TGAGTCTTTAAAGCATAGCAAATAGAGCTTCCCCTC...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAGATCTACAGTTACATaGTCCTGCTTTGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKRSTVT*SCFGYR
Trigger: TCTGTACCCAAAGCAGGACAATGTAACTGTAGATCT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGTGTCTCTATTCCAGATaGGCCCATTATTTCACTAAG +
Preference number: 5 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWCLYSR*AHYFTK
Trigger: CTTAGTGAAATAATGGGCCAATCTGGAATAGAGACA...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAATTGACTGCTATGGTTaGGATGTTTGTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKIDCYG*DVCVLF
Trigger: GAAGAGGACACAAACATCCAAACCATAGCAGTCAAT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS TCA 90 bp CAAGTGGACGAAAGAATCTCAAAGTTGGAAGATGGCCTTTCTGAATaGACAAAGCCTCCAAGAAATATGGGATTATATAAAAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: QVDERISKLEDGLSE*TKPPRNMGLYKKTE
Trigger: TTCAGTCTTTTTATATAATCCCATATTTCTTGGAGGCTTTGTTCATTCAGAAAGGCCATCTTCCAACTTTGAGATTCTTTCGTCCACTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAATCTCAATATTGTTGTaGGTCACAGCAAAGTACTGC +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKISILL*VTAKYC
Trigger: GCAGTACTTTGCTGTGACCAACAACAATATTGAGAT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAAGCATCTCAATATTGTaGTTGGTCACAGCAAAGTAC +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKSISIL*LVTAKY
Trigger: GTACTTTGCTGTGACCAACAACAATATTGAGATGCT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp ATATATTCTGTTACTGTACAATTGCTGATCAAATTTAGTGCGGTAGGTGAGTGGCTGGATGTGCATTTCTaGCAACATCTCAATAAGTTA +
Preference number: 5 (lower is better)
Translates to: IYSVTVQLLIKFSAVGEWLDVHF*QHLNKL
Trigger: TAACTTATTGAGATGTTGCAAGAAATGCACATCCAG...CCACTCACCTACCGCACTAAATTTGATCAGCAATTGTACAGTAACAGAATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACCATCTTTTTCAAGTaGTTCAACACAACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTIFFK*FNTTSL
Trigger: CAAACTGGTTGTGTTGAACAACTTGAAAAAGATGGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp CATGTCCAAAACTTAATCACATGCCACACTGGAATCAGTATACATGATAATTCTACCATCTTTTTCAAGTaGTTCAACACAACCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HVQNLITCHTGISIHDNSTIFFK*FNTTSL
Trigger: CAAACTGGTTGTGTTGAACAACTTGAAAAAGATGGT...AGAATTATCATGTATACTGATTCCAGTGTGGCATGTGATTAAGTTTTGGACATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACTGGATGTGCATTTCTaGCAACATCTCAATAAGTTA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKLDVHF*QHLNKL
Trigger: TAACTTATTGAGATGTTGCAAGAAATGCACATCCAG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAACATGCTCAAATATCATaGCAAATCTTCTGGCACAAA +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKHAQIS*QIFWHK
Trigger: TTTGTGCCAGAAGATTTGCAATGATATTTGAGCATG...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330947.7
ENST00000639264.1
ENST00000640258.1
CDS-3UTR CAA 90 bp GCTACCTTGTCTCAAAAGCGACCTAAACACTGGTGTATAAGGTTTAAATTAAAAACACCATCTCTGTGTTaGTCTTCATTCTTTCAAATG +
Preference number: 5 (lower is better)
Translates to: ATLSQKRPKHWCIRFKLKTPSLC*SSFFQM
Trigger: CATTTGAAAGAATGAAGACAAACACAGAGATGGTGT...TTTTAATTTAAACCTTATACACCAGTGTTTAGGTCGCTTTTGAGACAAGGTAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS CAA 72 bp GGGCTTGAAGGGGTAAGTTCTCTCCTTCCGTCCCTGTaGCTTTTCTACTCCTACACCATGTTCAACGTCCAG +
Preference number: 6 (lower is better)
Translates to: GLEGVSSLLPSL*LFYSYTMFNVQ
Trigger: CTGGACGTTGAACATGGTGTAGGAGTAGAAAAGCAACAGGGACGGAAGGAGAGAACTTACCCCTTCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS CCA 72 bp ACAGCAGAGACCAAGTGGACGAAAGAATCTCAAAGTTaGAAGATGGCCTTTCTGAATGAACAAAGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: TAETKWTKESQS*KMAFLNEQSLQ
Trigger: TTGGAGGCTTTGTTCATTCAGAAAGGCCATCTTCCAACTTTGAGATTCTTTCGTCCACTTGGTCTCTGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS CCA 72 bp ATTCTTTCAAATGACAGGCAGACAGCAGAGACCAAGTaGACGAAAGAATCTCAAAGTTGGAAGATGGCCTTT +
Preference number: 6 (lower is better)
Translates to: ILSNDRQTAETK*TKESQSWKMAF
Trigger: AAAGGCCATCTTCCAACTTTGAGATTCTTTCGTCCACTTGGTCTCTGCTGTCTGCCTGTCATTTGAAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639264.1
CDS CAA 72 bp TTCTCACAGAAGAGGTTAACTATTACCTGTCCTTCCTaGATCCCCGAATCTCAGGTTGATAGCAACATCAAG +
Preference number: 6 (lower is better)
Translates to: FSQKRLTITCPS*IPESQVDSNIK
Trigger: CTTGATGTTGCTATCAACCTGAGATTCGGGGATCAAGGAAGGACAGGTAATAGTTAACCTCTTCTGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640258.1
CDS CCA 72 bp AACAGCCCATCTGGTAGCATCTCAATCATCTCTCCTTaGAGAAGCACAATGCATATTCATATGTTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: NSPSGSISIISP*RSTMHIHMLKA
Trigger: AGCCTTTAACATATGAATATGCATTGTGCTTCTCCAAGGAGAGATGATTGAGATGCTACCAGATGGGCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439853.6
CDS CAA 72 bp ATGGTTTGGATGTTTGTGTCCTCTTCAGAATTCATGTaGAAGCTTAATCCTCAGTGCAACAATATTAAGAAA +
Preference number: 6 (lower is better)
Translates to: MVWMFVSSSEFM*KLNPQCNNIKK
Trigger: TTTCTTAATATTGTTGCACTGAGGATTAAGCTTCAACATGAATTCTGAAGAGGACACAAACATCCAAACCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640258.1