RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC8A (Homo sapiens)

Ensembl gene IDs: ENSG00000136802

Ensembl transcript IDs: ENST00000259324.5, ENST00000372599.7, ENST00000372600.9, ENST00000483638.1, ENST00000492784.1

Found 736 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCTGC +
Preference number: 1 (lower is better)
Translates to: RPALPWTAPQSPARH*WVTVPWLVRPGPLC
Trigger: GCAGAGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 90 bp CTCTCCCGTGGACCGCACCGCAGAGCCCAGCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTCGCCCCGGACCACTCTGCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: LSRGPHRRAQPGTAG*PSHGWFAPDHSAEV
Trigger: GACTTCAGCAGAGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCTCTGCGGTGCGGTCCACGGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp CGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTaGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGA +
Preference number: 1 (lower is better)
Translates to: RLGCVHSRRQGREPA*NQRLPSQGRPPHSR
Trigger: TCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp TGCACTCCAGGCGCCAGGGACGGGAACCGGCTTGGAACCAACGCCTaGCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGT +
Preference number: 1 (lower is better)
Translates to: CTPGARDGNRLGTNA*PPRGDLPIPDQPLS
Trigger: ACTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp CTAAAGCAGGGTGGCTTCCAGCCACCAGGTGCCGACTGGGCTGTGTaGACTCCAGGCGCCAGGGACGGGAACCGGCTTGGAACCAACGCC +
Preference number: 1 (lower is better)
Translates to: LKQGGFQPPGADWAV*TPGARDGNRLGTNA
Trigger: GGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAGCCACCCTGCTTTAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp GCCACAAATACTGAAGAGGCAAGCTCCAGGCCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCAGCCCGG +
Preference number: 1 (lower is better)
Translates to: ATNTEEASSRPGLSS*RPALPWTAPQSPAR
Trigger: CCGGGCTGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGGAGCTTGCCTCTTCAGTATTTGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp GGTGGTGACAGGGCTGATGGAAGCAGCGGAGGCCAGCGGTGGCACTaGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCG +
Preference number: 1 (lower is better)
Translates to: GGDRADGSSGGQRWH*THPCRRRWGNKVWA
Trigger: CGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCTGCTTCCATCAGCCCTGTCACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp GCTGATGGAAGCAGCGGAGGCCAGCGGTGGCACTGGACACACCCATaGCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: ADGSSGGQRWHWTHP*RRRWGNKVWAKWLL
Trigger: GAGGAGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCTGCTTCCATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp GGACCAGGTGGTGACAGGGCTGATGGAAGCAGCGGAGGCCAGCGGTaGCACTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTC +
Preference number: 1 (lower is better)
Translates to: GPGGDRADGSSGGQR*HWTHPCRRRWGNKV
Trigger: GACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCTGCTTCCATCAGCCCTGTCACCACCTGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp CCGAGTGATCTAAAGCAGGGTGGCTTCCAGCCACCAGGTGCCGACTaGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTGGA +
Preference number: 1 (lower is better)
Translates to: PSDLKQGGFQPPGAD*AVCTPGARDGNRLG
Trigger: TCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAGCCACCCTGCTTTAGATCACTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp GCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTaGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGA +
Preference number: 1 (lower is better)
Translates to: AAGGGETKSGRSGSS*LLNTVRGEAGQARG
Trigger: TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp CTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTaGGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGC +
Preference number: 1 (lower is better)
Translates to: LLDQGHTRSGRHPAP*AQGKETQFNVWLLC
Trigger: GCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 90 bp CAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTaGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGG +
Preference number: 1 (lower is better)
Translates to: QPESPPSLAAPEHSL*PTATEMSACQDTWR
Trigger: CCTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 90 bp CTGGCCTCCAGGGAGGAGACCCTGATTATCCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAG +
Preference number: 1 (lower is better)
Translates to: LASREETLIIQILRS*DLLSSTSTCPGGRE
Trigger: CTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGGAGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp CTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACT +
Preference number: 1 (lower is better)
Translates to: LHPAPRERKHSSTSG*FAQGKLPPCPETPT
Trigger: AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp AATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCT +
Preference number: 1 (lower is better)
Translates to: NRTPGPRSHQIRKTP*TLRPGKGNTVQRLA
Trigger: AGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 90 bp CCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATaGGTGCCTGCCAAGACACATGGAGGAGAAAGAAAACAAGACACC +
Preference number: 1 (lower is better)
Translates to: PWQLQNIPSGRQPQK*VPAKTHGGERKQDT
Trigger: GGTGTCTTGTTTTCTTTCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 90 bp GGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTaGCTGCCAAGACACATGGAGGAGAAAGAAAACAAGACACCAAAA +
Preference number: 1 (lower is better)
Translates to: GSSRTFPLADSHRNE*LPRHMEEKENKTPK
Trigger: TTTTGGTGTCTTGTTTTCTTTCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 90 bp GGTTGTCAGAGGCTAGTGTGCATTATTTCTGAGGATTATATCCAATaGCACGACGCAGAAAACACAAATGGACGGACAGACGGATGGACA +
Preference number: 1 (lower is better)
Translates to: GCQRLVCIISEDYIQ*HDAENTNGRTDGWT
Trigger: TGTCCATCCGTCTGTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAATGCACACTAGCCTCTGACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CAA 90 bp CCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTaGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCG +
Preference number: 2 (lower is better)
Translates to: PTGLCALQAPGTGTG*EPTPALPGATSPFP
Trigger: CGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNGQRSC*LLCWAG
Trigger: GCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCC...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCGGCCAGCGGTGGCACTaGACACACCCATGCCGCAGG +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSGQRWH*THPCRR
Trigger: CCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCC...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAAGCGGTCCTGCTGCTTaGTGTGCTGGGCCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRSGPAA*CAGPAS
Trigger: CGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 2 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGACCAGCCCGGCACTGCTaGGTGACCGTCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRPARHC*VTVPWL
Trigger: CAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGG...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCCAGCCCGGCACTGCTaGGTGACCGTCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAPARHC*VTVPWL
Trigger: CAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAGAGGGGAGGTGCGAATaGAGCACCGTTCATCCGGGG +
Preference number: 2 (lower is better)
Translates to: GTGTGLEPTPALPGATSPEGRCE*STVHPG
Trigger: CCCCGGATGAACGGTGCTCCATTCGCACCTCCCCTC...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGAGCGGTCCTGCTGCTTaGTGTGCTGGGCCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKSGPAA*CAGPAS
Trigger: CGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNIRKTP*TLRPGK
Trigger: TTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGAT...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 2 (lower is better)
Translates to: QAWPFQLEACSPVDRTAETVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTTGCCCTGGGGGACGTaGGTCTCAGAGGGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: QAWPFQLEACSPVDRTAELPWGT*VSEGEK
Trigger: CTTTTCTCCCTCTGAGACTCACGTCCCCCAGGGCAA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATTGCCCTGGGGGACGTaGGTCTCAGAGGGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRLPWGT*VSEGEK
Trigger: CTTTTCTCCCTCTGAGACTCACGTCCCCCAGGGCAA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATCCTCCACAAGCACTTaGCCTGGGGGACGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRSSTST*PGGRES
Trigger: AGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCACGAGGAGGGGAGGTaGGAATGGAGCACCGTTCAT +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNHEEGR*EWSTVH
Trigger: ATGAACGGTGCTCCATTCGCACCTCCCCTCCTCGTG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCACGAGGAGGGGAGGTaGGAATGGAGCACCGTTCAT +
Preference number: 2 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAHEEGR*EWSTVH
Trigger: ATGAACGGTGCTCCATTCGCACCTCCCCTCCTCGTG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 2 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 2 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATTCCAGCTGGAGGCCTaGTCTCCCGTGGACCGCACC +
Preference number: 2 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGFQLEA*SPVDRT
Trigger: GGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGGGCTCCTTAACACTGTaGGTGGAGAGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKGSLTL*VERQGR
Trigger: CCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCC...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCTGGGGAAACAAAGTCTaGGCGAAGTGGCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSWGNKV*AKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCA...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSQILRS*DLLSST
Trigger: TGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: LETCSPPQALALGDVSLRGQRSC*LLCWAG
Trigger: GCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCC...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 2 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRACALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAAT +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNQVGVK*PAASLN
Trigger: ATTTAGCGATGCCGCCGGGCATTTAACACCCACCTG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCAGCCACAGAAATGAGTaGCTGCCAAGACACATGGAG +
Preference number: 2 (lower is better)
Translates to: PGTGTGLEPTPALPGATSSHRNE*LPRHME
Trigger: CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 2 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRTVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVRPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEQILRS*DLLSST
Trigger: TGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCAGCCCACCTTTCCCTaGACACCTTCCATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRQPTFP*TPSIWA
Trigger: AGCCCAGATGGAAGGTGTTCAGGGAAAGGTGGGCTG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGAGCGGTCCTGCTGCTTaGTGTGCTGGGCCGGCCTCG +
Preference number: 2 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGSGPAA*CAGPAS
Trigger: CGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWTGQRS*CLLCWA
Trigger: GGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 2 (lower is better)
Translates to: TRCRLGCVHSRRQGREPACALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGG +
Preference number: 2 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTSPARH*WVTVPW
Trigger: CCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGG +
Preference number: 2 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGSPARH*WVTVPW
Trigger: CCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGTTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAA +
Preference number: 2 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAIRKTP*TLRPGK
Trigger: TTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGAT...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTATAAGTTATCTGGATaGAGGAGGTGGGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAYKLSG*RRWEME
Trigger: CTCCATCTCCCACCTCCTTCATCCAGATAACTTATA...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSTGQRS*CLLCWA
Trigger: GGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGT...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTG +
Preference number: 2 (lower is better)
Translates to: TRCRLGCVHSRRQGREPASSTSG*FAQGKL
Trigger: CAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACT...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGTCCGGGCCTGAGGACTaGGCAGCGGTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWSGPED*AAVLLL
Trigger: AAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGA...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 2 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCCAGCCCGGCACTGCTaGGTGACCGTCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCPARHC*VTVPWL
Trigger: CAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCRPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNTQFNV*LLCSRE
Trigger: TTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGT...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCTGQRS*CLLCWA
Trigger: GGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGATTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTCCGGGCCTGAGGACTaGGCAGCGGTCCTGCTGCTT +
Preference number: 2 (lower is better)
Translates to: TFPLADSHRNECLPRHMESGPED*AAVLLL
Trigger: AAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CAA 90 bp AGCACCGTTCATCCGGGGATTAGCCAACCCGAGTCTCCTCCCTCCTaGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATG +
Preference number: 2 (lower is better)
Translates to: STVHPGISQPESPPS*AAPEHSLWPTATEM
Trigger: CATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAATCCCCGGATGAACGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTAACTGCCACAAATACTaGAGAGGCAAGCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVANCHKY*RGKLQA
Trigger: GGCCTGGAGCTTGCCTCTTCAGTATTTGTGGCAGTT...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGTCCTCCACAAGCACTTaGCCTGGGGGACGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWSSTST*PGGRES
Trigger: AGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGA...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 2 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGNVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCGAGGGGAGGTGCGAATaGAGCACCGTTCATCCGGGG +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCEGRCE*STVHPG
Trigger: CCCCGGATGAACGGTGCTCCATTCGCACCTCCCCTC...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 2 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAGGCAAGCTCCAGGCCTaGCCTTTCCAGCTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAGKLQA*PFQLEA
Trigger: GGCCTCCAGCTGGAAAGGCCAGGCCTGGAGCTTGCC...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CAA 90 bp ACCCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTaGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACT +
Preference number: 2 (lower is better)
Translates to: TLRPGKGNTVQRLAA*LKGNCHPALRLQLT
Trigger: AGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGACCTTCCATCTGGGCTaGACTTTCTTGGGAATGTAT +
Preference number: 2 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRTFHLG*TFLGMY
Trigger: ATACATTCCCAAGAAAGTTCAGCCCAGATGGAAGGT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTGGGCTGAACTTTCTTaGGAATGTATAAGTTATCTG +
Preference number: 2 (lower is better)
Translates to: QPPGADWAVCTPGARDGNWAELS*ECISYL
Trigger: CAGATAACTTATACATTCCCAAGAAAGTTCAGCCCA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTACCTTCCATCTGGGCTaGACTTTCTTGGGAATGTAT +
Preference number: 2 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVATFHLG*TFLGMY
Trigger: ATACATTCCCAAGAAAGTTCAGCCCAGATGGAAGGT...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTAACTGCCACAAATACTaGAGAGGCAAGCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSNCHKY*RGKLQA
Trigger: GGCCTGGAGCTTGCCTCTTCAGTATTTGTGGCAGTT...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAAT +
Preference number: 2 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTQVGVK*PAASLN
Trigger: ATTTAGCGATGCCGCCGGGCATTTAACACCCACCTG...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACA +
Preference number: 2 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSQILRS*DLLSST
Trigger: TGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: TFPLADSHRNECLPRHMEYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATATAAGTTATCTGGATaGAGGAGGTGGGAGATGGAG +
Preference number: 2 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLYKLSG*RRWEME
Trigger: CTCCATCTCCCACCTCCTTCATCCAGATAACTTATA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 2 (lower is better)
Translates to: TFPLADSHRNECLPRHMENVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVRPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGACAGAAATGAGTGCCTaGCAAGACACATGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWTEMSA*QDTWRR
Trigger: TCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCTTGGAACCAACGCCTaGCCTCCCAGGGGCGACCTC +
Preference number: 2 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRLGTNA*PPRGDL
Trigger: GAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGTGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 2 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSTQFNV*LLCSRE
Trigger: TTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGT...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 2 (lower is better)
Translates to: EQIELLDQGHTRSGRHPANVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCACAGAAATGAGTGCCTaGCAAGACACATGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCTEMSA*QDTWRR
Trigger: TCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTTCCAGCCACCAGGTaGCGACTGGGCTGTGTGCAC +
Preference number: 2 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCLPATR*RLGCVH
Trigger: GTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATGGGCTGAACTTTCTTaGGAATGTATAAGTTATCTG +
Preference number: 2 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGWAELS*ECISYL
Trigger: CAGATAACTTATACATTCCCAAGAAAGTTCAGCCCA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 2 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRTVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCAGCCCACCTTTCCCTaGACACCTTCCATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVQPTFP*TPSIWA
Trigger: AGCCCAGATGGAAGGTGTTCAGGGAAAGGTGGGCTG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGGGAAACTGCCACCCTaGCCTGAGACTCCAACTCAC +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVGKLPP*PETPTH
Trigger: GTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCC...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTGGGCTGAACTTTCTTaGGAATGTATAAGTTATCTG +
Preference number: 2 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVWAELS*ECISYL
Trigger: CAGATAACTTATACATTCCCAAGAAAGTTCAGCCCA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAACTGCCACCCTGCCCTaGGACTCCAACTCACTGGCC +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGTATLP*DSNSLA
Trigger: GGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGCCAGAACATTCCCTCTaGCCGACAGCCACAGAAATG +
Preference number: 2 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMPEHSL*PTATEM
Trigger: CATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGG...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGTGGGGAAACAAAGTCTaGGCGAAGTGGCTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMWGNKV*AKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCA...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAAGGTGGGGACCCGAGTaGTCTAAAGCAGGGTGGCTT +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGRWGPE*SKAGWL
Trigger: AAGCCACCCTGCTTTAGATCACTCGGGTCCCCACCT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVCALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGCCACAGAAATGAGTaGCTGCCAAGACACATGGAG +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVSHRNE*LPRHME
Trigger: CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTG +
Preference number: 2 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVSSTSG*FAQGKL
Trigger: CAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 2 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTACCTTCCATCTGGGCTaGACTTTCTTGGGAATGTAT +
Preference number: 2 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCTFHLG*TFLGMY
Trigger: ATACATTCCCAAGAAAGTTCAGCCCAGATGGAAGGT...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp CTCCCGTGGACCGCACCGCAGAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGA +
Preference number: 3 (lower is better)
Translates to: LPWTAPQSPARH*WVTVPWLVRPG
Trigger: TCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCTCTGCGGTGCGGTCCACGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp CCGTGGACCGCACCGCAGAGCCCAGCCCGGCACTGCTaGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCA +
Preference number: 3 (lower is better)
Translates to: PWTAPQSPARHC*VTVPWLVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCTCTGCGGTGCGGTCCACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp GGACCGCACCGCAGAGCCCAGCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTCGCCCCGGACCACTCT +
Preference number: 3 (lower is better)
Translates to: GPHRRAQPGTAG*PSHGWFAPDHS
Trigger: AGAGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCTCTGCGGTGCGGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp GGCGCCAGGGACGGGAACCGGCTTGGAACCAACGCCTaGCCTCCCAGGGGCGACCTCCCCATTCCCGACCAG +
Preference number: 3 (lower is better)
Translates to: GARDGNRLGTNA*PPRGDLPIPDQ
Trigger: CTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: QPPGADWAVCTPGARDGNQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp TGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTaGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCC +
Preference number: 3 (lower is better)
Translates to: CVHSRRQGREPA*NQRLPSQGRPP
Trigger: GGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp GGTGGCTTCCAGCCACCAGGTGCCGACTGGGCTGTGTaGACTCCAGGCGCCAGGGACGGGAACCGGCTTGGA +
Preference number: 3 (lower is better)
Translates to: GGFQPPGADWAV*TPGARDGNRLG
Trigger: TCCAAGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAGCCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp GGTGACAGGGCTGATGGAAGCAGCGGAGGCCAGCGGTaGCACTGGACACACCCATGCCGCAGGCGGTGGGGA +
Preference number: 3 (lower is better)
Translates to: GDRADGSSGGQR*HWTHPCRRRWG
Trigger: TCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCTGCTTCCATCAGCCCTGTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp AGGGCTGATGGAAGCAGCGGAGGCCAGCGGTGGCACTaGACACACCCATGCCGCAGGCGGTGGGGAAACAAA +
Preference number: 3 (lower is better)
Translates to: RADGSSGGQRWH*THPCRRRWGNK
Trigger: TTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCTGCTTCCATCAGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp CAGCGGTGGCACTGGACACACCCATGCCGCAGGCGGTaGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTG +
Preference number: 3 (lower is better)
Translates to: QRWHWTHPCRRR*GNKVWAKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTGCCACCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGACCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRPNTAL*RLALLH
Trigger: GTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGG...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp TCTAAGGCGGGGACCCTTCTAAGGTGGGGACCCGAGTaGTCTAAAGCAGGGTGGCTTCCAGCCACCAGGTGC +
Preference number: 3 (lower is better)
Translates to: SKAGTLLRWGPE*SKAGWLPATRC
Trigger: GCACCTGGTGGCTGGAAGCCACCCTGCTTTAGATCACTCGGGTCCCCACCTTAGAAGGGTCCCCGCCTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp CCCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PCAQGKETQFNV*LLCSRETATLP
Trigger: GGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp GCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAG +
Preference number: 3 (lower is better)
Translates to: APRERKHSSTSG*FAQGKLPPCPE
Trigger: CTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCAC +
Preference number: 3 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVPNTAL*RLALLH
Trigger: GTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGG...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTaGCCTGAGACTCCAACTCACTGGCCGTTAGTGTCT +
Preference number: 3 (lower is better)
Translates to: TSGCFAQGKLPP*PETPTHWPLVS
Trigger: AGACACTAACGGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp ACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTCCAACTCACTGGCCGT +
Preference number: 3 (lower is better)
Translates to: TVQRLAALLKGN*HPALRLQLTGR
Trigger: ACGGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAATAAGGACAAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: PDHSAEVQVGVK*PAASLNKDKGK
Trigger: TTTCCCCTTGTCCTTATTTAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR-3UTR CAA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGGGACGGGAACCGGCTaGGAACCAACGCCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMGTGTG*EPTPAL
Trigger: GAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp AGGGAGGAGACCCTGATTATCCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACAAGCACTTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: REETLIIQILRS*DLLSSTSTCPG
Trigger: CCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGGATAATCAGGGTCTCCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp CTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATaGGTGCCTGCCAAGACACATGGAGGAGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LQNIPSGRQPQK*VPAKTHGGERK
Trigger: TTTTCTTTCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR GCA 72 bp AGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTaGCTGCCAAGACACATGGAGGAGAAAGAAAACAAG +
Preference number: 3 (lower is better)
Translates to: RTFPLADSHRNE*LPRHMEEKENK
Trigger: CTTGTTTTCTTTCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp AGGCTAGTGTGCATTATTTCTGAGGATTATATCCAATaGCACGACGCAGAAAACACAAATGGACGGACAGAC +
Preference number: 3 (lower is better)
Translates to: RLVCIISEDYIQ*HDAENTNGRTD
Trigger: GTCTGTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAATGCACACTAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR TCA 72 bp GCTTCATGGTTGTCAGAGGCTAGTGTGCATTATTTCTaGGGATTATATCCAATGACACGACGCAGAAAACAC +
Preference number: 3 (lower is better)
Translates to: ASWLSEASVHYF*GLYPMTRRRKH
Trigger: GTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAATGCACACTAGCCTCTGACAACCATGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CCA 72 bp GGATTATATCCAATGACACGACGCAGAAAACACAAATaGACGGACAGACGGATGGACATAATCATTAAGACA +
Preference number: 3 (lower is better)
Translates to: GLYPMTRRRKHK*TDRRMDIIIKT
Trigger: TGTCTTAATGATTATGTCCATCCGTCTGTCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCTCCGGGCCAGGGGCTaGCCAGCCCCGGAACGAATC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSLRARG*PAPERI
Trigger: GATTCGTTCCGGGGCTGGGCAGCCCCTGGCCCGGAG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPGQRSC*LLCWAG
Trigger: GCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCC...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSSPARH*WVTVPW
Trigger: CCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCGACAGGGCCCTCGTaGTCCAGGGCGAGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSPTGPS*SRASRS
Trigger: GCTTCGACTCGCCCTGGACCACGAGGGCCCTGTCGG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCCGACAGGGCCCTCGTaGTCCAGGGCGAGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAPTGPS*SRASRS
Trigger: GCTTCGACTCGCCCTGGACCACGAGGGCCCTGTCGG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCAGCACGCCCGTCTCTaGGCGGTCCACGATACCCTG +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTQHARL*AVHDTL
Trigger: CAGGGTATCGTGGACCGCTCAGAGACGGGCGTGCTG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCGGGCACAGCGGTAGGTaGGGTAGCCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSGHSGR*GSPSGS
Trigger: AGAGCCTGACGGGCTACCGCACCTACCGCTGTGCCC...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACGGCACTCCAGCCGGTTaGCCCGCAGCTCGATCTGCG +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNGTPAG*PAARSA
Trigger: CGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCC...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGGCACTCCAGCCGGTTaGCCCGCAGCTCGATCTGCG +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRGTPAG*PAARSA
Trigger: CGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCC...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRATGQRS*CLLCWA
Trigger: GGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGT...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGAGCCCAGCCCGGCACTaGTGGGTGACCGTCCCATGG +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLSPARH*WVTVPW
Trigger: CCATGGGACGGTCACCCAGCAGTGCCGGGCTGGGCT...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACGCCGACTGGGCTGTGTaGACTCCAGGCGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNADWAV*TPGARD
Trigger: GTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGC...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTAGGCCTGGACCTCACTaGATCTCGCCTCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRPGPH*ISPRPR
Trigger: CCGAGGGCGAGGCGAGATCCAGTGAGGTCCAGGCCT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPRSFRH*KSSGGS
Trigger: GCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSRSFRH*KSSGGS
Trigger: GCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATCCGGGCCTGAGGACTaGGCAGCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPSGPED*AAVLLL
Trigger: AAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGA...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTAGCGGAGGCCAGCGGTaGCACTGGACACACCCATGC +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTSGGQR*HWTHPC
Trigger: GCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCGGACGGGAACCGGCTTaGAACCAACGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAGREPA*NQRLPS
Trigger: GGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCC...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCAGCACGCCCGTCTCTaGGCGGTCCACGATACCCTG +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEQHARL*AVHDTL
Trigger: CAGGGTATCGTGGACCGCTCAGAGACGGGCGTGCTG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTGCACGCCCACATCTGTaGCCACCTGTGGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTARPHL*PPVAAC
Trigger: GCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGC...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCACCCTGGAGGGCAGTaGCTGCAGCACGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTHPGGQ*LQHVVA
Trigger: GGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACACCCTGGAGGGCAGTaGCTGCAGCACGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPHPGGQ*LQHVVA
Trigger: GGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCACTGCCACCCTGCCCTaGGACTCCAACTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRATATLP*DSNSLA
Trigger: GGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGT...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCCCCGCAGCTCGATCTaGGTCAGGTTGGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAPRSSI*VRLVSS
Trigger: CGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRTGQRS*CLLCWA
Trigger: GGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRSASG*SARPPW
Trigger: CCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTACCCATTCATCTTGCTaGAGGCCGGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTTHSSC*RPAWGR
Trigger: GCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCACCCATTCATCTTGCTaGAGGCCGGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSTHSSC*RPAWGR
Trigger: GCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAACCCATTCATCTTGCTaGAGGCCGGCTTGGGGTCGC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPTHSSC*RPAWGR
Trigger: GCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGT...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAACCCTGCTCGATCCGTaGCTTGGTCCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPTLLDP*LGPLQH
Trigger: ATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGT...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTGGATCAGCTCCAGCTTaGGGACCTCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTGSAPA*GPPAPP
Trigger: TGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCC...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGGCACGCCCACATCTGTaGCCACCTGTGGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLARPHL*PPVAAC
Trigger: GCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGC...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCGATCCGGTTGGCCGTaGTGGCTAGGTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRSGWP*WLGSGG
Trigger: ACCTCCAGAACCTAGCCATCACGGCCAACCGGATCG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCACCCTGGAGGGCAGTaGCTGCAGCACGTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNHPGGQ*LQHVVA
Trigger: GGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCGGGTGGCAGTGTGTTaGACAGGTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRVAVC*TGPPPP
Trigger: TGGTGGAGGAGGACCTGTTCAACACACTGCCACCCG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTCTCCGCGCTCAGGTTaGCCGTCAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNSPRSG*PSGAAP
Trigger: AGGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTGGCTCCTTAACACTGTaGGTGGAGAGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTGSLTL*VERQGR
Trigger: CCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCC...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAGCTCGATCCGTGACTTaGTCCGCTGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPARSVT*SAAAWA
Trigger: TGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGC...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACAATGCTGGGCGGGATaGTCACGTCGGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPQCWAG*SRRGSA
Trigger: AGCTGATCCCCGACGTGACCATCCCGCCCAGCATTG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATCAGCTCGCCCACCCTaGAGGGCAGTGACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRSARPP*RAVTAA
Trigger: TGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGGGTCCAGGTCATACTTaGTGCCTGTGGGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEGPGHT*CLWGPC
Trigger: ACACGGGCCCCACAGGCATCAAGTATGACCTGGACC...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGGTGGCAGTGTGTTaGACAGGTCCTCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNRVAVC*TGPPPP
Trigger: TGGTGGAGGAGGACCTGTTCAACACACTGCCACCCG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCAGCCCACCTTTCCCTaGACACCTTCCATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSQPTFP*TPSIWA
Trigger: AGCCCAGATGGAAGGTGTTCAGGGAAAGGTGGGCTG...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCCCAAGTCAGGGCACTaGCCCCATCGGAACGATAGG +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAPKSGH*PHRNDR
Trigger: CCTATCGTTCCGATGGGGGCAGTGCCCTGACTTGGG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTTGCTCCATGGACGCTaGCTCCCTAGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPALLHGR*LPRAAP
Trigger: TGGTGCAGCCCTAGGGAGGCAGCGTCCATGGAGCAA...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR GCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCGGTCCACGATACCCTaGTCGATCCGTGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRARSTIP*SIRDLV
Trigger: GACCAAGTCACGGATCGAGCAGGGTATCGTGGACCG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATTCTTGGTGAGCCGCTaGCGGAGCTTGTCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRFLVSR*RSLSSV
Trigger: GACGCTGGACAAGCTCCGGCAGCGGCTCACCAAGAA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTTCTTGGTGAGCCGCTaGCGGAGCTTGTCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNFLVSR*RSLSSV
Trigger: GACGCTGGACAAGCTCCGGCAGCGGCTCACCAAGAA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCAGGTTGCCCGTCAGGTaGAGCTCCTCCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSRLPVR*SSSSVF
Trigger: GAAGACACTGGAGGAGCTGCACCTGACGGGCAACCT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCTGGAGGGCAGTGACTaGAGCACGTTGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPALEGSD*STLLPR
Trigger: CCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEIRKTP*TLRPGK
Trigger: TTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGAT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACGCCGGCCGCAGCGCTaGTCCGGCGCCTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGRRPQR*SGASFC
Trigger: ACAAAAGGAGGCGCCGGAGCAGCGCTGCGGCCGGCG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372600.9
CDS-3UTR CCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCAGGGGTCGGCAGAATaGTGGAGTTGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEQGSAE*WSWGRW
Trigger: CCACCTACCCCAACTCCACCATTCTGCCGACCCCTG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATCCCCCTCCTCCACATaGGTCCGGAACTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPSPSST*VRNFFT
Trigger: GGTGAAGAAGTTCCGGACCCATGTGGAGGAGGGGGA...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGCAATGCTGGGCGGGATaGTCACGTCGGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLQCWAG*SRRGSA
Trigger: AGCTGATCCCCGACGTGACCATCCCGCCCAGCATTG...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCGGGCGCTTCAATCTTaGCCGCTGTGTGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPARALQS*PLCGRA
Trigger: GGCTCTACCACACAGCGGCCAAGATTGAAGCGCCCG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPATVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTGGTGCGCGGGAATTTaGACCAGAAGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAWCAGI*TRSCCR
Trigger: CCTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCA...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCAAACGAGTACTTCTTaGGGGAGCGCCGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAQTSTS*GSAVAS
Trigger: GGATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGGCACGCCCACATCTGTaGCCACCTGTGGCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKARPHL*PPVAAC
Trigger: GCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGC...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRSGCCG*GPGSAA
Trigger: AGCTGCGCTACCTGGACCTCAGCCACAACAACCTGA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAAGGTGGGGACCCGAGTaGTCTAAAGCAGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRRWGPE*SKAGWL
Trigger: AAGCCACCCTGCTTTAGATCACTCGGGTCCCCACCT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTACTCCGGGCCAGGGGCTaGCCAGCCCCGGAACGAATC +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLLRARG*PAPERI
Trigger: GATTCGTTCCGGGGCTGGGCAGCCCCTGGCCCGGAG...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGAGGTTGCCCGTCAGGTaGAGCTCCTCCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAERLPVR*SSSSVF
Trigger: GAAGACACTGGAGGAGCTGCACCTGACGGGCAACCT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTCCTCCACAAGCACTTaGCCTGGGGGACGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNSSTST*PGGRES
Trigger: AGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGGGAAACTGCCACCCTaGCCTGAGACTCCAACTCAC +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRGKLPP*PETPTH
Trigger: GTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCC...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAAGGCTGAAGATGGAGTaGGGGATGCGCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRRLKME*GMRSRS
Trigger: TGACCTGGAGCGCATCCCCCACTCCATCTTCAGCCT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGGCTGCGCTTGAGCAGTaGGCACTCGCCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRAALEQ*ALAQLH
Trigger: GTGGAGCTGGGCGAGTGCCCACTGCTCAAGCGCAGC...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACTCCTTCACCTCGGGTaGCAGTGTGTTGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPLLHLG*QCVEQV
Trigger: GACCTGTTCAACACACTGCCACCCGAGGTGAAGGAG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTCCGGGCCTGAGGACTaGGCAGCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRSGPED*AAVLLL
Trigger: AAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAGGCCAGCGGTGGCACTaGACACACCCATGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGGQRWH*THPCRR
Trigger: CCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCC...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGCTGTCACCGGAATCATaGTTCAACCTGGGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLLSPES*FNLGSP
Trigger: CGGCGAGCCCAGGTTGAACCATGATTCCGGTGACAG...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372599.7
CDS-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTGGTGCGCGGGAATTTaGACCAGAAGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEWCAGI*TRSCCR
Trigger: CCTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGAGGACGCCAGGATCTTaGAGAGTGTGGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKRTPGS*RVWPGG
Trigger: ACCCCCTGGCCACACTCTTCAAGATCCTGGCGTCCT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACCTGCGCGTTCTTGGTaGGCCGCTGCCGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGPARSW*AAAGAC
Trigger: ACAAGCTCCGGCAGCGGCTCACCAAGAACGCGCAGG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTTACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCGACAGCCACAGAAATaGGTGCCTGCCAAGACACAT +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRARQPQK*VPAKTH
Trigger: ATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACGGATGTCGCTGTAGCTaGTCTCCTCACGGATCGACT +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNGCRCS*SPHGST
Trigger: AGTCGATCCGTGAGGAGAGCAGCTACAGCGACATCC...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGTCGGTGAACTTGATGTaGAGCGCCCGCAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLSVNLM*SARRFS
Trigger: TGAGAACCTGCGGGCGCTGCACATCAAGTTCACCGA...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTCTCCGCGCTCAGGTTaGCCGTCAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRSPRSG*PSGAAP
Trigger: AGGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGAGGCAGGTGAGGCGGTaGAGGTGCTGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKRQVRR*RCWKLM
Trigger: CATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAACGTTGTTGCCCAGGTaGAGGGCCCGCAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGTLLPR*RARSFR
Trigger: CCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGATCCTGCTGCTTGCTGTaGTGGGCCGGCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGSCCLL*WAGLAQ
Trigger: CTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGA...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCTTGGAACCAACGCCTaGCCTCCCAGGGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVALGTNA*PPRGDL
Trigger: GAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGACTTGGAACCAACGCCTaGCCTCCCAGGGGCGACCTC +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGLGTNA*PPRGDL
Trigger: GAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAG...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCAGATCATCTTGTCTTaGGTGACCTGCAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAQIILS*VTCSVP
Trigger: GGGGACGCTGCAGGTCACCCAAGACAAGATGATCTG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGGGTTGCCGATCTGGATaGGGATGTAGGCGATGTGGT +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEGCRSG*GCRRCG
Trigger: ACCACATCGCCTACATCCCCATCCAGATCGGCAACC...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGCTCCTTCACCTCGGGTaGCAGTGTGTTGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLLLHLG*QCVEQV
Trigger: GACCTGTTCAACACACTGCCACCCGAGGTGAAGGAG...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTCCGGGCCTGAGGACTaGGCAGCGGTCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVASGPED*AAVLLL
Trigger: AAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTGGCAAGCTCCAGGCCTaGCCTTTCCAGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAGKLQA*PFQLEA
Trigger: GGCCTCCAGCTGGAAAGGCCAGGCCTGGAGCTTGCC...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAGGACGGGAACCGGCTTaGAACCAACGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGGREPA*NQRLPS
Trigger: GGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCC...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGGGTCCAGGTCATACTTaGTGCCTGTGGGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRGPGHT*CLWGPC
Trigger: ACACGGGCCCCACAGGCATCAAGTATGACCTGGACC...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGGGATCAGCTCCAGCTTaGGGACCTCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRGSAPA*GPPAPP
Trigger: TGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCC...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCCCGCAGCCCGTCGATaGCGATGTAGCGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRPAARR*RCSGCS
Trigger: AGAACAACCGCTACATCGTCATCGACGGGCTGCGGG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKSGCCG*GPGSAA
Trigger: AGCTGCGCTACCTGGACCTCAGCCACAACAACCTGA...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCGATCCGGTTGGCCGTaGTGGCTAGGTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRRSGWP*WLGSGG
Trigger: ACCTCCAGAACCTAGCCATCACGGCCAACCGGATCG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTQILRS*DLLSST
Trigger: TGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTG...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGAACTGCCACAAATACTaGAGAGGCAAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAENCHKY*RGKLQA
Trigger: GGCCTGGAGCTTGCCTCTTCAGTATTTGTGGCAGTT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGACTCCGGGCCAGGGGCTaGCCAGCCCCGGAACGAATC +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRLRARG*PAPERI
Trigger: GATTCGTTCCGGGGCTGGGCAGCCCCTGGCCCGGAG...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATCTCCGCGCTCAGGTTaGCCGTCAGGTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGSPRSG*PSGAAP
Trigger: AGGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTTGATGGACAGCTTCTaGAGGTGCACGCCCACATCT +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAELMDSF*RCTPTS
Trigger: AGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCTGGAGGGCAGTGACTaGAGCACGTTGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRLEGSD*STLLPR
Trigger: CCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGACCCCGCAGCTCGATCTaGGTCAGGTTGGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGPRSSI*VRLVSS
Trigger: CGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGG...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGGQRSC*LLCWAG
Trigger: GCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSCALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGGGGAAACTGCCACCCTaGCCTGAGACTCCAACTCAC +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKGKLPP*PETPTH
Trigger: GTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCC...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLNVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGCTGTCACCGGAATCATaGTTCAACCCCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLLSPES*FNPKDG
Trigger: GCCATCCTTGGGGTTGAACCATGATTCCGGTGACAG...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259324.5
ENST00000372600.9
CDS-3UTR CCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATGGTCCGCTGCAGCATaGGCACGGTGGCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLWSAAA*ARWPPR
Trigger: ACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTTGAGGCCCGTGAGCTaGGCAATGCTGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVALRPVS*AMLGGM
Trigger: CATCCCGCCCAGCATTGCCCAGCTCACGGGCCTCAA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCAGAACATTCCCTCTaGCCGACAGCCACAGAAATG +
Preference number: 4 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEPEHSL*PTATEM
Trigger: CATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCCAGAACATTCCCTCTaGCCGACAGCCACAGAAATG +
Preference number: 4 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAPEHSL*PTATEM
Trigger: CATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTGGGGAAACAAAGTCTaGGCGAAGTGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNWGNKV*AKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCCGCAGCCCGTCGATaGCGATGTAGCGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAPAARR*RCSGCS
Trigger: AGAACAACCGCTACATCGTCATCGACGGGCTGCGGG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRSGCCG*GPGSAA
Trigger: AGCTGCGCTACCTGGACCTCAGCCACAACAACCTGA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCGATCCGGTTGGCCGTaGTGGCTAGGTTCTGGAGGT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVARSGWP*WLGSGG
Trigger: ACCTCCAGAACCTAGCCATCACGGCCAACCGGATCG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGAGGTGGGGACCCGAGTaGTCTAAAGCAGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRRWGPE*SKAGWL
Trigger: AAGCCACCCTGCTTTAGATCACTCGGGTCCCCACCT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAAGGATAGACACAAAGTaGTCCAGCTTCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRRIDTK*SSFELV
Trigger: CACCAGCTCGAAGCTGGAGCACTTTGTGTCTATCCT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVRDLVR*SMGTVA
Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACG...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCGGTCCACGATACCCTaGTCGATCCGTGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRRSTIP*SIRDLV
Trigger: GACCAAGTCACGGATCGAGCAGGGTATCGTGGACCG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAGGCAGGTGAGGCGGTaGAGGTGCTGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGRQVRR*RCWKLM
Trigger: CATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEGQRSC*LLCWAG
Trigger: GCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCACAGAAATGAGTGCCTaGCAAGACACATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRATEMSA*QDTWRR
Trigger: TCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGT...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCGACTGGGCTGTGTaGACTCCAGGCGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSADWAV*TPGARD
Trigger: GTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGC...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGTTGCTCCATGGACGCTaGCTCCCTGGGCTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGLLHGR*LPGLAA
Trigger: CGCGGCGAGCCCAGGGAGGCAGCGTCCATGGAGCAA...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCCGACAGGGCCCTCGTaGTCCAGGGCGAGTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSPTGPS*SRASRS
Trigger: GCTTCGACTCGCCCTGGACCACGAGGGCCCTGTCGG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTTGCTGCTTGCTGTGCTaGGCCGGCCTCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTCCLLC*AGLAQA
Trigger: GGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCA...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTGGGTCCCAGGACCTCTaGTGGCAGCTCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTGSQDL*WQLSPW
Trigger: CCAGGGGCTGAGCTGCCACCAGAGGTCCTGGGACCC...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTRPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PGTGTGLEPTPALPGATSTQFNV*LLCSRE
Trigger: TTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTAGCGGAGGCCAGCGGTaGCACTGGACACACCCATGC +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVSGGQR*HWTHPC
Trigger: GCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCT...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCAAACGAGTACTTCTTaGGGGAGCGCCGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRQTSTS*GSAVAS
Trigger: GGATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCCTGCGCGTTCTTGGTaGGCCGCTGCCGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTPARSW*AAAGAC
Trigger: ACAAGCTCCGGCAGCGGCTCACCAAGAACGCGCAGG...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGACCTGCGCGTTCTTGGTaGGCCGCTGCCGGAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRPARSW*AAAGAC
Trigger: ACAAGCTCCGGCAGCGGCTCACCAAGAACGCGCAGG...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACAGCCCACCTTTCCCTaGACACCTTCCATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGQPTFP*TPSIWA
Trigger: AGCCCAGATGGAAGGTGTTCAGGGAAAGGTGGGCTG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAGACAGCTTCTGCAGGTaGACGCCCACATCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGDSFCR*TPTSVT
Trigger: GGTCACAGATGTGGGCGTGCACCTGCAGAAGCTGTC...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGACGTTGTTGCCCAGGTaGAGGGCCCGCAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWTLLPR*RARSFR
Trigger: CCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGACTGCAGCACGTTGTTaGCCAGGTGCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWTAARC*PGAGPA
Trigger: TGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGAGCGGTCCTGCTGCTTaGTGTGCTGGGCCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMESGPAA*CAGPAS
Trigger: CGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTCCTCCACAAGCACTTaGCCTGGGGGACGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVASSTST*PGGRES
Trigger: AGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGTTCCAGCTGGAGGCCTaGTCTCCCGTGGACCGCACC +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGFQLEA*SPVDRT
Trigger: GGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAA...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTTTCCAGCTGGAGGCCTaGTCTCCCGTGGACCGCACC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSFQLEA*SPVDRT
Trigger: GGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAA...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLIRKTP*TLRPGK
Trigger: TTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGAT...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACACAGAAATGAGTGCCTaGCAAGACACATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: QPPGADWAVCTPGARDGNTEMSA*QDTWRR
Trigger: TCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGT...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGGGCTGCACCAGGCCTaGACCTCACTGGATCTCGCC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSGLHQA*TSLDLA
Trigger: GGCGAGATCCAGTGAGGTCCAGGCCTGGTGCAGCCC...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR CCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAGCTCGATCCGTGACTTaGTCCGCTGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLARSVT*SAAAWA
Trigger: TGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGC...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGATCTCCTGCAGGTTGTaGAGGCTGAAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKISCRL*RLKMEW
Trigger: CCACTCCATCTTCAGCCTCCACAACCTGCAGGAGAT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGACGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRRSFRH*KSSGGS
Trigger: GCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCG...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGGCTGCGCTTGAGCAGTaGGCACTCGCCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWAALEQ*ALAQLH
Trigger: GTGGAGCTGGGCGAGTGCCCACTGCTCAAGCGCAGC...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDRPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCCTGGCCTTTCCAGCTaGAGGCCTGCTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSPGLSS*RPALPW
Trigger: CCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTGGCAAGCTCCAGGCCTaGCCTTTCCAGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTGKLQA*PFQLEA
Trigger: GGCCTCCAGCTGGAAAGGCCAGGCCTGGAGCTTGCC...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGGCCAGCGGTGGCACTaGACACACCCATGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEGQRWH*THPCRR
Trigger: CCTGCGGCATGGGTGTGTCCAGTGCCACCGCTGGCC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTGGTCCAGGTCATACTTaGTGCCTGTGGGGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVGPGHT*CLWGPC
Trigger: ACACGGGCCCCACAGGCATCAAGTATGACCTGGACC...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGACCCTGCTCGATCCGTaGCTTGGTCCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWTLLDP*LGPLQH
Trigger: ATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCAGCACGCCCGTCTCTaGGCGGTCCACGATACCCTG +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCQHARL*AVHDTL
Trigger: CAGGGTATCGTGGACCGCTCAGAGACGGGCGTGCTG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGGCGCTCCAGGTTGGTaGGGTTGCCGATCTGGATGG +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSGAPGW*GCRSGW
Trigger: CCATCCAGATCGGCAACCTCACCAACCTGGAGCGCC...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATATAAGTTATCTGGATaGAGGAGGTGGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRYKLSG*RRWEME
Trigger: CTCCATCTCCCACCTCCTTCATCCAGATAACTTATA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGACTGCCACCCTGCCCTaGGACTCCAACTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGTATLP*DSNSLA
Trigger: GGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAACTGCCACCCTGCCCTaGGACTCCAACTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRTATLP*DSNSLA
Trigger: GGCCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGT...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGGGCACAGCGGTAGGTaGGGTAGCCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDGHSGR*GSPSGS
Trigger: AGAGCCTGACGGGCTACCGCACCTACCGCTGTGCCC...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTTCTTGGTGAGCCGCTaGCGGAGCTTGTCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVFLVSR*RSLSSV
Trigger: GACGCTGGACAAGCTCCGGCAGCGGCTCACCAAGAA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGATCGGTGAACTTGATGTaGAGCGCCCGCAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGSVNLM*SARRFS
Trigger: TGAGAACCTGCGGGCGCTGCACATCAAGTTCACCGA...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGACGTTGTTGCCCAGGTaGAGGGCCCGCAGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMETLLPR*RARSFR
Trigger: CCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGACTGCAGCACGTTGTTaGCCAGGTGCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWTAARC*PGAGPA
Trigger: TGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCTGGAGGGCAGTGACTaGAGCACGTTGTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVLEGSD*STLLPR
Trigger: CCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAG...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGACACACCCATaGCGCAGGCGGTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTHWTHP*RRRWGN
Trigger: GTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTG...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGACTTCCAGCCACCAGGTaGCGACTGGGCTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRLPATR*RLGCVH
Trigger: GTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAG...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTAGAGACTCTAAAACGTaGCTTAGTGTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRDSKT*LSVHVI
Trigger: AATCACGTGGACACTAAGGCACGTTTTAGAGTCTCT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAAGGCTGAAGATGGAGTaGGGGATGCGCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLRLKME*GMRSRS
Trigger: TGACCTGGAGCGCATCCCCCACTCCATCTTCAGCCT...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTGGTTGCCGATCTGGATaGGGATGTAGGCGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAGCRSG*GCRRCG
Trigger: ACCACATCGCCTACATCCCCATCCAGATCGGCAACC...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTTCAGCTCGCCCACCCTaGAGGGCAGTGACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTSARPP*RAVTAA
Trigger: TGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGA...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWTVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAGAGGGGAGGTGCGAATaGAGCACCGTTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLREGRCE*STVHPG
Trigger: CCCCGGATGAACGGTGCTCCATTCGCACCTCCCCTC...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCAGCGGAGGCCAGCGGTaGCACTGGACACACCCATGC +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSGGQR*HWTHPC
Trigger: GCATGGGTGTGTCCAGTGCCACCGCTGGCCTCCGCT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATGGTGCGCGGGAATTTaGACCAGAAGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLWCAGI*TRSCCR
Trigger: CCTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAACCCTGCTCGATCCGTaGCTTGGTCCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRTLLDP*LGPLQH
Trigger: ATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGT...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGGACGCCAGGATCTTaGAGAGTGTGGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWRTPGS*RVWPGG
Trigger: ACCCCCTGGCCACACTCTTCAAGATCCTGGCGTCCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGCGTCCACTCGTTGTTaGGGTTCAGCTGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGASTRC*GSAAAA
Trigger: AGCTGCGGCAGCTGAACCTCAACAACGAGTGGACGC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGGATCAGCTCCAGCTTaGGGACCTCCAGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGGSAPA*GPPAPP
Trigger: TGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGGCGCTCCAGGTTGGTaGGGTTGCCGATCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEGAPGW*GCRSGW
Trigger: CCATCCAGATCGGCAACCTCACCAACCTGGAGCGCC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGTTGCCCTGGGGGACGTaGGTCTCAGAGGGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWLPWGT*VSEGEK
Trigger: CTTTTCTCCCTCTGAGACTCACGTCCCCCAGGGCAA...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGTCGGGCCCACCTGAATaGACAGGACTGGGACAGGGT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWSGPPE*TGLGQG
Trigger: ACCCTGTCCCAGTCCTGTGCATTCAGGTGGGCCCGA...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR GCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATCGGTGAACTTGATGTaGAGCGCCCGCAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLSVNLM*SARRFS
Trigger: TGAGAACCTGCGGGCGCTGCACATCAAGTTCACCGA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATTGATGGACAGCTTCTaGAGGTGCACGCCCACATCT +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGLMDSF*RCTPTS
Trigger: AGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGAGGTTCTGGAGGTTCTaGAGGAGGCCGATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWRFWRF*RRPMSA
Trigger: TGCCGACATCGGCCTCCTGCAGAACCTCCAGAACCT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAAT +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGQVGVK*PAASLN
Trigger: ATTTAGCGATGCCGCCGGGCATTTAACACCCACCTG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGNVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGATCCGGAAGACACCCTaGACCCTGCGCCCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGIRKTP*TLRPGK
Trigger: TTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGAT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCACGAGGAGGGGAGGTaGGAATGGAGCACCGTTCAT +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVHEEGR*EWSTVH
Trigger: ATGAACGGTGCTCCATTCGCACCTCCCCTCCTCGTG...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACCACTGGACACACCCATaGCGCAGGCGGTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDHWTHP*RRRWGN
Trigger: GTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTG...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGCACTGGACACACCCATaGCGCAGGCGGTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEHWTHP*RRRWGN
Trigger: GTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAGTG...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAGCCGACTGGGCTGTGTaGACTCCAGGCGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAADWAV*TPGARD
Trigger: GTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGC...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCTTCCAGCCACCAGGTaGCGACTGGGCTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCLPATR*RLGCVH
Trigger: GTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGCAGGGGTCGGCAGAATaGTGGAGTTGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGQGSAE*WSWGRW
Trigger: CCACCTACCCCAACTCCACCATTCTGCCGACCCCTG...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGCTCGATCCGTGACTTaGTCCGCTGCAGCATGGGCA +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGARSVT*SAAAWA
Trigger: TGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATCTCAAACAGCGCCTTaGCTTGCTCCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLSQTAP*LAPPPS
Trigger: AGAAGGAGGGGGAGCAAGCCAAGGCGCTGTTTGAGA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTCCCCCTCCTCCACATaGGTCCGGAACTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVSPSST*VRNFFT
Trigger: GGTGAAGAAGTTCCGGACCCATGTGGAGGAGGGGGA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTTGAGGCCCGTGAGCTaGGCAATGCTGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMELRPVS*AMLGGM
Trigger: CATCCCGCCCAGCATTGCCCAGCTCACGGGCCTCAA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTCAGCTCGCCCACCCTaGAGGGCAGTGACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMESARPP*RAVTAA
Trigger: TGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGCTGTCCGGGAGTTCTaGGAGAAGCTAGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEAVREF*EKLGLP
Trigger: GGGCAGGCCTAGCTTCTCCCAGAACTCCCGGACAGC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGACTGTCCTCTCGCTCTaGCCTGACTCACAAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGTVLSL*PDSQAA
Trigger: GGCCGCTTGTGAGTCAGGCCAGAGCGAGAGGACAGT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAGGCCTGCTCTCCCGTaGACCGCACCGCAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPARPALP*TAPQSP
Trigger: TGGGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACCAGAACATTCCCTCTaGCCGACAGCCACAGAAATG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGPEHSL*PTATEM
Trigger: CATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGAGGGGAGGTGCGAATaGAGCACCGTTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEEGRCE*STVHPG
Trigger: CCCCGGATGAACGGTGCTCCATTCGCACCTCCCCTC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTGGGGAAACAAAGTCTaGGCGAAGTGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAWGNKV*AKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGCCATGCCGCAGGCGGTaGGGAAACAAAGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEPCRRR*GNKVWA
Trigger: CGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGG...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGAGGACGCCAGGATCTTaGAGAGTGTGGCCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMERTPGS*RVWPGG
Trigger: ACCCCCTGGCCACACTCTTCAAGATCCTGGCGTCCT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTAGGCGAAGTCGTTCTTaGCGTCGGGGATGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTRRSRS*RRGCRC
Trigger: ACAGCGACATCCCCGACGTCAAGAACGACTTCGCCT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGGCGAAGTCGTTCTTaGCGTCGGGGATGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWRRSRS*RRGCRC
Trigger: ACAGCGACATCCCCGACGTCAAGAACGACTTCGCCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTAGGCGAAGTCGTTCTTaGCGTCGGGGATGTCGCTGT +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSRRSRS*RRGCRC
Trigger: ACAGCGACATCCCCGACGTCAAGAACGACTTCGCCT...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGCGTCCACTCGTTGTTaGGGTTCAGCTGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDASTRC*GSAAAA
Trigger: AGCTGCGGCAGCTGAACCTCAACAACGAGTGGACGC...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCCCGCAGCCCGTCGATaGCGATGTAGCGGTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCPAARR*RCSGCS
Trigger: AGAACAACCGCTACATCGTCATCGACGGGCTGCGGG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGGTGGGGACCCGAGTaGTCTAAAGCAGGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWRWGPE*SKAGWL
Trigger: AAGCCACCCTGCTTTAGATCACTCGGGTCCCCACCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTTTATTTGATACTGTaGCCGAGTCTACAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GTGTGLEPTPALPGATSPFYLIL*PSLQVQ
Trigger: CTGAACTTGTAGACTCGGTCACAGTATCAAATAAAA...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTCTTCAGGATCCGGTATaGTGGCTGCGTGTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVLQDPV*WLRVRK
Trigger: TTTGCGGACACGCAGCCAGCATACCGGATCCTGAAG...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAAGGATAGACACAAAGTaGTCCAGCTTCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGRIDTK*SSFELV
Trigger: CACCAGCTCGAAGCTGGAGCACTTTGTGTCTATCCT...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCGGTCCACGATACCCTaGTCGATCCGTGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSRSTIP*SIRDLV
Trigger: GACCAAGTCACGGATCGAGCAGGGTATCGTGGACCG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAGGGCACAGCGGTAGGTaGGGTAGCCCGTCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAGHSGR*GSPSGS
Trigger: AGAGCCTGACGGGCTACCGCACCTACCGCTGTGCCC...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGCCAGGTAGCGCAGCTTaGGGCAGTAGAAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEPGSAA*GSRRAG
Trigger: CCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACCCAGGTAGCGCAGCTTaGGGCAGTAGAAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDPGSAA*GSRRAG
Trigger: CCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATCCTGCTGCTTGCTGTaGTGGGCCGGCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPASCCLL*WAGLAQ
Trigger: CTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGGCTCCTTAACACTGTaGGTGGAGAGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEGSLTL*VERQGR
Trigger: CCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTTGTCAGAGGCTAGTGTaGATTATTTCTGAGGATTAT +
Preference number: 4 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTCQRLV*IISEDY
Trigger: ATAATCCTCAGAAATAATGCACACTAGCCTCTGACA...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTACTGAATGCACAGGACTaGGACAGGGTCTGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLLNAQD*DRVWVL
Trigger: AAGAACCCAGACCCTGTCCCAGTCCTGTGCATTCAG...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR CCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGCAGGATCCGGTATGCTaGCTGCGTGTCCGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWQDPVC*LRVRKV
Trigger: TACTTTGCGGACACGCAGCCAGCATACCGGATCCTG...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCCAGGGGTCGGCAGAATaGTGGAGTTGGGGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCQGSAE*WSWGRW
Trigger: CCACCTACCCCAACTCCACCATTCTGCCGACCCCTG...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTAGGCTGAAGATGGAGTaGGGGATGCGCTCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTRLKME*GMRSRS
Trigger: TGACCTGGAGCGCATCCCCCACTCCATCTTCAGCCT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGCTCCTTCACCTCGGGTaGCAGTGTGTTGAACAGGTC +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWLLHLG*QCVEQV
Trigger: GACCTGTTCAACACACTGCCACCCGAGGTGAAGGAG...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCGCAGAAAACACAAATaGACGGACAGACGGATGGAC +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVARRKHK*TDRRMD
Trigger: GTCCATCCGTCTGTCCGTCCATTTGTGTTTTCTGCG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGACGCAGAAAACACAAATaGACGGACAGACGGATGGAC +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGRRKHK*TDRRMD
Trigger: GTCCATCCGTCTGTCCGTCCATTTGTGTTTTCTGCG...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAGTCCACGTCGAACTTaGTGTTGTGCACGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGSPRRT*CCARSR
Trigger: TCTACTACGTGCACAACATCAAGTTCGACGTGGACT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACCAGCCCACCTTTCCCTaGACACCTTCCATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDQPTFP*TPSIWA
Trigger: AGCCCAGATGGAAGGTGTTCAGGGAAAGGTGGGCTG...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGGGATGTCGCTGTAGCTaGTCTCCTCACGGATCGACT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWGCRCS*SPHGST
Trigger: AGTCGATCCGTGAGGAGAGCAGCTACAGCGACATCC...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAGGATGTCGCTGTAGCTaGTCTCCTCACGGATCGACT +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRGCRCS*SPHGST
Trigger: AGTCGATCCGTGAGGAGAGCAGCTACAGCGACATCC...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGACAGCTTCTGCAGGTaGACGCCCACATCTGTGACC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEDSFCR*TPTSVT
Trigger: GGTCACAGATGTGGGCGTGCACCTGCAGAAGCTGTC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACTCCTCCACAAGCACTTaGCCTGGGGGACGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDSSTST*PGGRES
Trigger: AGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGA...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTTTGCTCAAGGGAAACTaGCACCCTGCCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTLLKGN*HPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAA...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGSSTSG*FAQGKL
Trigger: CAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGSSTSG*FAQGKL
Trigger: CAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACT...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCAGGATCCGGTATGCTaGCTGCGTGTCCGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTQDPVC*LRVRKV
Trigger: TACTTTGCGGACACGCAGCCAGCATACCGGATCCTG...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCTCCCCCTCCTCCACATaGGTCCGGAACTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSPSST*VRNFFT
Trigger: GGTGAAGAAGTTCCGGACCCATGTGGAGGAGGGGGA...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGATCTCCTGCAGGTTGTaGAGGCTGAAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWISCRL*RLKMEW
Trigger: CCACTCCATCTTCAGCCTCCACAACCTGCAGGAGAT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTAGTAGAAGAGCTGGGTaGGGATCTTCTCGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVASRRAG*GSSRSC
Trigger: ACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACT...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCTCACTGACGGTCGATaGCTTTTTGTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSLTDGR*LFVHGP
Trigger: GGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCCTCCACGTCCTCACTaGCGGTCGATGACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSPPRPH*RSMTFC
Trigger: ACAAAAAGTCATCGACCGTCAGTGAGGACGTGGAGG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCAGGGAGGAGACCCTaGTTATCCAAATACTGCGCT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWPGRRP*LSKYCA
Trigger: AGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTGG...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGACTGGGACAGGGTCTaGGTTCTTAGATTCCGGACC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEDWDRV*VLRFRT
Trigger: GGTCCGGAATCTAAGAACCCAGACCCTGTCCCAGTC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR CCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACCAGATCATCTTGTCTTaGGTGACCTGCAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDQIILS*VTCSVP
Trigger: GGGGACGCTGCAGGTCACCCAAGACAAGATGATCTG...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGATCTCCTGCAGGTTGTaGAGGCTGAAGATGGAGTGG +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGISCRL*RLKMEW
Trigger: CCACTCCATCTTCAGCCTCCACAACCTGCAGGAGAT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGGGTTGCCGATCTGGATaGGGATGTAGGCGATGTGGT +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEGCRSG*GCRRCG
Trigger: ACCACATCGCCTACATCCCCATCCAGATCGGCAACC...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGTGGGGAAACAAAGTCTaGGCGAAGTGGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGWGNKV*AKWLLL
Trigger: CAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCA...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CAA 72 bp CCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTaGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: PGKGNTVQRLAA*LKGNCHPALRL
Trigger: GAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATGCAGGCCAGGAAGATaGGCGTGTGCAGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPACRPGR*ACAEAP
Trigger: TGGTGCTTCTGCACACGCTCATCTTCCTGGCCTGCA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGCCTCCACGTCCTCACTaGCGGTCGATGACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMEPPRPH*RSMTFC
Trigger: ACAAAAAGTCATCGACCGTCAGTGAGGACGTGGAGG...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACTGGTGCCCTCATTGTTaGTGGACAGCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDWCPHC*WTASAG
Trigger: ACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCA...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCCCGGCACTGCTGGGTaGCCGTCCCATGGCTGGTTC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRPGTAG*PSHGWF
Trigger: GAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGAACTGCCACAAATACTaGAGAGGCAAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMENCHKY*RGKLQA
Trigger: GGCCTGGAGCTTGCCTCTTCAGTATTTGTGGCAGTT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGGATAGACACAAAGTaGTCCAGCTTCGAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWRIDTK*SSFELV
Trigger: CACCAGCTCGAAGCTGGAGCACTTTGTGTCTATCCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGTTGTTGAGGTTCAGCTaGCGCAGCTTGTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWLLRFS*RSLFSL
Trigger: GAGTGAGAACAAGCTGCGGCAGCTGAACCTCAACAA...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAGGTTGCCCGTCAGGTaGAGCTCCTCCAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPARLPVR*SSSSVF
Trigger: GAAGACACTGGAGGAGCTGCACCTGACGGGCAACCT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAGGTTCTGGAGGTTCTaGAGGAGGCCGATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPARFWRF*RRPMSA
Trigger: TGCCGACATCGGCCTCCTGCAGAACCTCCAGAACCT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGGGCACTCCAGCCGGTTaGCCCGCAGCTCGATCTGCG +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRGTPAG*PAARSA
Trigger: CGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCC...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 4 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSCALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTACAGAAATGAGTGCCTaGCAAGACACATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVTEMSA*QDTWRR
Trigger: TCTCCTCCATGTGTCTTGGCAGGCACTCATTTCTGT...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGCCACAGAAATGAGTaGCTGCCAAGACACATGGAG +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWSHRNE*LPRHME
Trigger: CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTGCTGCTTGCTGTGCTaGGCCGGCCTCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCCCLLC*AGLAQA
Trigger: GGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGTGCTGCTTGCTGTGCTaGGCCGGCCTCGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRCCLLC*AGLAQA
Trigger: GGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCA...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCAGCCCGGCACTGCTaGGTGACCGTCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCPARHC*VTVPWL
Trigger: CAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVTQFNV*LLCSRE
Trigger: TTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGT...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
3UTR CAA 72 bp CAGGGAGGAGACCCTGATTATCCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QGGDPDYPNTAL*RLALLHKHLPW
Trigger: CCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGGATAATCAGGGTCTCCTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGCCCTCGGGCCCACCTaGATGCACAGGACTGGGACA +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMALGPT*MHRTGT
Trigger: TGTCCCAGTCCTGTGCATTCAGGTGGGCCCGAGGGC...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR GCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMRDLVR*SMGTVA
Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACG...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVRDLVR*SMGTVA
Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACTGCGCTCTTGAGACTTaGTCTCCTCCACAAGCACTT +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDCALET*SPPQAL
Trigger: AAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCA...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGTTCCAGCTGGAGGCCTaGTCTCCCGTGGACCGCACC +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMFQLEA*SPVDRT
Trigger: GGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAA...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTGGTCCGCTGCAGCATaGGCACGGTGGCCTCCACGT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCWSAAA*ARWPPR
Trigger: ACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTGCCACGAGGCTGTCCTaGCTGTCCGGGAGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCATRLS*LSGSSG
Trigger: CCCAGAACTCCCGGACAGCCAGGACAGCCTCGTGGC...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTGGGCTGAACTTTCTTaGGAATGTATAAGTTATCTG +
Preference number: 4 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRWAELS*ECISYL
Trigger: CAGATAACTTATACATTCCCAAGAAAGTTCAGCCCA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTGGGTGACCGTCCCATaGCTGGTTCGCCCCGGACCA +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCWVTVP*LVRPGP
Trigger: TGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTGGCAAGCTCCAGGCCTaGCCTTTCCAGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCGKLQA*PFQLEA
Trigger: GGCCTCCAGCTGGAAAGGCCAGGCCTGGAGCTTGCC...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTACACAGTTCAACGTCTaGCTGCTTTGCTCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTTQFNV*LLCSRE
Trigger: TTCCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGGACGGGAACCGGCTTaGAACCAACGCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMGREPA*NQRLPS
Trigger: GGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCC...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACTCACTGACGGTCGATaGCTTTTTGTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPALTDGR*LFVHGP
Trigger: GGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAG...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGAGTCCACGTCGAACTTaGTGTTGTGCACGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: TFPLADSHRNECLPRHMESPRRT*CCARSR
Trigger: TCTACTACGTGCACAACATCAAGTTCGACGTGGACT...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATACCAAGAACTAAAGTaGGGGTCCCAGGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAYQELK*GSQDLW
Trigger: CCAGAGGTCCTGGGACCCTCACTTTAGTTCTTGGTA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGACCTTCCATCTGGGCTaGACTTTCTTGGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGTFHLG*TFLGMY
Trigger: ATACATTCCCAAGAAAGTTCAGCCCAGATGGAAGGT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAACTGCCACAAATACTaGAGAGGCAAGCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPANCHKY*RGKLQA
Trigger: GGCCTGGAGCTTGCCTCTTCAGTATTTGTGGCAGTT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATTTTATTTGATACTGTaGCCGAGTCTACAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGFYLIL*PSLQVQ
Trigger: CTGAACTTGTAGACTCGGTCACAGTATCAAATAAAA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCACTGCAGCACGTTGTTaGCCAGGTGCAGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVTAARC*PGAGPA
Trigger: TGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCCCCGCAGCTCGATCTaGGTCAGGTTGGTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRPRSSI*VRLVSS
Trigger: CGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCAGTTCAACGTCTGGCTaGTTTGCTCAAGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSSTSG*FAQGKL
Trigger: CAGTTTCCCTTGAGCAAAGCAGCCAGACGTTGAACT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCTTCCAGCCACCAGGTaGCGACTGGGCTGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVLPATR*RLGCVH
Trigger: GTGCACACAGCCCAGTCGGCACCTGGTGGCTGGAAG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTGTCAGAGGCTAGTGTaGATTATTTCTGAGGATTAT +
Preference number: 4 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVACQRLV*IISEDY
Trigger: ATAATCCTCAGAAATAATGCACACTAGCCTCTGACA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCAGTAGAAGAGCTGGGTaGGGATCTTCTCGATCTTGT +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSRRAG*GSSRSC
Trigger: ACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRSASG*SARPPW
Trigger: CCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGAGGGGAGGTGCGAATaGAGCACCGTTCATCCGGGG +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVEGRCE*STVHPG
Trigger: CCCCGGATGAACGGTGCTCCATTCGCACCTCCCCTC...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCCATGCCGCAGGCGGTaGGGAAACAAAGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVPCRRR*GNKVWA
Trigger: CGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGCGTCCACTCGTTGTTaGGGTTCAGCTGCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMASTRC*GSAAAA
Trigger: AGCTGCGGCAGCTGAACCTCAACAACGAGTGGACGC...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACTATAAGTTATCTGGATaGAGGAGGTGGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: KYCALETCSPPQALALGDYKLSG*RRWEME
Trigger: CTCCATCTCCCACCTCCTTCATCCAGATAACTTATA...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGGCAGGTGAGGCGGTaGAGGTGCTGGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVRQVRR*RCWKLM
Trigger: CATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCCAGGTAGCGCAGCTTaGGGCAGTAGAAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRPGSAA*GSRRAG
Trigger: CCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAAGCGGTCCTGCTGCTTaGTGTGCTGGGCCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGSGPAA*CAGPAS
Trigger: CGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGGCTCCTTAACACTGTaGGTGGAGAGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVGSLTL*VERQGR
Trigger: CCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCC...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGAGAGACTCTAAAACGTaGCTTAGTGTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWRDSKT*LSVHVI
Trigger: AATCACGTGGACACTAAGGCACGTTTTAGAGTCTCT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCAATGCTGGGCGGGATaGTCACGTCGGGGATCAGCT +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRQCWAG*SRRGSA
Trigger: AGCTGATCCCCGACGTGACCATCCCGCCCAGCATTG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCGGGCGCTTCAATCTTaGCCGCTGTGTGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRRALQS*PLCGRA
Trigger: GGCTCTACCACACAGCGGCCAAGATTGAAGCGCCCG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCGGGCGCTTCAATCTTaGCCGCTGTGTGGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVRALQS*PLCGRA
Trigger: GGCTCTACCACACAGCGGCCAAGATTGAAGCGCCCG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACCTAGCCGGGGATCCTaGCCCCAAGTCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGPSRGS*PQVRAL
Trigger: CAGTGCCCTGACTTGGGGGCAGGATCCCCGGCTAGG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGGACAGCTTCTGCAGGTaGACGCCCACATCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRDSFCR*TPTSVT
Trigger: GGTCACAGATGTGGGCGTGCACCTGCAGAAGCTGTC...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGAGGTTCTGGAGGTTCTaGAGGAGGCCGATGTCGGCA +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMRFWRF*RRPMSA
Trigger: TGCCGACATCGGCCTCCTGCAGAACCTCCAGAACCT...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATCCTGCTGCTTGCTGTaGTGGGCCGGCCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGSCCLL*WAGLAQ
Trigger: CTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCACGAGGAGGGGAGGTaGGAATGGAGCACCGTTCAT +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVHEEGR*EWSTVH
Trigger: ATGAACGGTGCTCCATTCGCACCTCCCCTCCTCGTG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCTCTTTGAAAAAGAAATaGCAAGGAGAGAGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSLKKK*QGESPE
Trigger: CTCTGGGCTCTCTCCTTGCCATTTCTTTTTCAAAGA...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAGCTGCGCTTGAGCAGTaGGCACTCGCCCAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGAALEQ*ALAQLH
Trigger: GTGGAGCTGGGCGAGTGCCCACTGCTCAAGCGCAGC...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAAACGAGTACTTCTTaGGGGAGCGCCGTAGCATCC +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCQTSTS*GSAVAS
Trigger: GGATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATATAAGTTATCTGGATaGAGGAGGTGGGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAYKLSG*RRWEME
Trigger: CTCCATCTCCCACCTCCTTCATCCAGATAACTTATA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGATGTCAGAGGCTAGTGTaGATTATTTCTGAGGATTAT +
Preference number: 4 (lower is better)
Translates to: LETCSPPQALALGDVSLRCQRLV*IISEDY
Trigger: ATAATCCTCAGAAATAATGCACACTAGCCTCTGACA...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCAGATCATCTTGTCTTaGGTGACCTGCAGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRQIILS*VTCSVP
Trigger: GGGGACGCTGCAGGTCACCCAAGACAAGATGATCTG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTCTCAAACAGCGCCTTaGCTTGCTCCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCSQTAP*LAPPPS
Trigger: AGAAGGAGGGGGAGCAAGCCAAGGCGCTGTTTGAGA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGTCTCAAACAGCGCCTTaGCTTGCTCCCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMSQTAP*LAPPPS
Trigger: AGAAGGAGGGGGAGCAAGCCAAGGCGCTGTTTGAGA...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATTGAGGCCCGTGAGCTaGGCAATGCTGGGCGGGATG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGLRPVS*AMLGGM
Trigger: CATCCCGCCCAGCATTGCCCAGCTCACGGGCCTCAA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACGATCTGCGTCAGGTTaGTCAGCTCGCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGRSASG*SARPPW
Trigger: CCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTTGGGCTGAACTTTCTTaGGAATGTATAAGTTATCTG +
Preference number: 4 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTWAELS*ECISYL
Trigger: CAGATAACTTATACATTCCCAAGAAAGTTCAGCCCA...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACCATGCCGCAGGCGGTaGGGAAACAAAGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGPCRRR*GNKVWA
Trigger: CGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGCTCACTGACGGTCGATaGCTTTTTGTCCATGGACCC +
Preference number: 4 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMLTDGR*LFVHGP
Trigger: GGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAG...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCTCCACGTCCTCACTaGCGGTCGATGACTTTTTGT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCPPRPH*RSMTFC
Trigger: ACAAAAAGTCATCGACCGTCAGTGAGGACGTGGAGG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTGGTGCCCTCATTGTTaGTGGACAGCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCWCPHC*WTASAG
Trigger: ACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTGGTGCCCTCATTGTTaGTGGACAGCTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVWCPHC*WTASAG
Trigger: ACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGACAGCCACAGAAATaGGTGCCTGCCAAGACACAT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRQPQK*VPAKTH
Trigger: ATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCGACAGCCACAGAAATaGGTGCCTGCCAAGACACAT +
Preference number: 4 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVRQPQK*VPAKTH
Trigger: ATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCG...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAAT +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRQVGVK*PAASLN
Trigger: ATTTAGCGATGCCGCCGGGCATTTAACACCCACCTG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTAACGTCTGGCTGCTTTaGTCAAGGGAAACTGCCACC +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCNVWLL*SRETAT
Trigger: GGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGTT...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTGTCACCGGAATCATaGTTCAACCCCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCLSPES*FNPKDG
Trigger: GCCATCCTTGGGGTTGAACCATGATTCCGGTGACAG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259324.5
ENST00000372600.9
CDS-3UTR CCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGAAGTGGCTCCTCTTaGCTCCTTAACACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRSGSS*LLNTVR
Trigger: ACGCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGCAAATACTGCGCTCTTaGGACTTGCTCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRQILRS*DLLSST
Trigger: TGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTG...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGTTGTTGAGGTTCAGCTaGCGCAGCTTGTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRLLRFS*RSLFSL
Trigger: GAGTGAGAACAAGCTGCGGCAGCTGAACCTCAACAA...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGACCTTCCATCTGGGCTaGACTTTCTTGGGAATGTAT +
Preference number: 4 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRTFHLG*TFLGMY
Trigger: ATACATTCCCAAGAAAGTTCAGCCCAGATGGAAGGT...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATTGATGGACAGCTTCTaGAGGTGCACGCCCACATCT +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGLMDSF*RCTPTS
Trigger: AGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACAGGTGGGTGTTAAATaGCCGGCGGCATCGCTAAAT +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGQVGVK*PAASLN
Trigger: ATTTAGCGATGCCGCCGGGCATTTAACACCCACCTG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGACGAAGTGGCTCCTCTTaGCTCCTTAACACTGTGCGT +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGRSGSS*LLNTVR
Trigger: ACGCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCG...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGATTGTTGAGGTTCAGCTaGCGCAGCTTGTTCTCACTC +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGLLRFS*RSLFSL
Trigger: GAGTGAGAACAAGCTGCGGCAGCTGAACCTCAACAA...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR GCA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTAGAGACTCTAAAACGTaGCTTAGTGTCCACGTGATT +
Preference number: 4 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRDSKT*LSVHVI
Trigger: AATCACGTGGACACTAAGGCACGTTTTAGAGTCTCT...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR TCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAAGTCCACGTCGAACTTaGTGTTGTGCACGTAGTAGA +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGSPRRT*CCARSR
Trigger: TCTACTACGTGCACAACATCAAGTTCGACGTGGACT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CCA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAAGTAGAAGAGCTGGGTaGGGATCTTCTCGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGSRRAG*GSSRSC
Trigger: ACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp GCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGCCTCGCTCAGGCCTGCTCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: ARPAPPGLRTGQRSC*LLCWAGLAQACSLS
Trigger: TGACAAGGAGCAGGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTaGTGCTTGCTGTGCTGGGCCGGCCTCGCTCAGGCCTGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: EARPAPPGLRTGQRS*CLLCWAGLAQACSL
Trigger: CAAGGAGCAGGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS-3UTR CAA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCGGGACGGGAACCGGCTaGGAACCAACGCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PGTGTGLEPTPALPGATSGTGTG*EPTPAL
Trigger: GAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp GCAGTGGGCACTCGCCCAGCTCCACAGGCAGGCACTCCAGCCGGTTaGCCCGCAGCTCGATCTGCGTCAGGTTGGTCAGCTCGCCCACCC +
Preference number: 5 (lower is better)
Translates to: AVGTRPAPQAGTPAG*PAARSASGWSARPP
Trigger: GGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTGCCCACTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGACTGCAGCACGTTGTaGCCCAGGTGCAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRDCSTL*PRCRAR
Trigger: GCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTC...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGAGGCACTCCAGCCGGTaGCCCCGCAGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAERHSSR*PRSSIC
Trigger: GCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp TCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTTGTTGCCCAGGTaGAGGGCCCGCAGCTTCCGGCACTGGAAGAGCTCCGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SPTLEGSDCSTLLPR*RARSFRHWKSSGGS
Trigger: GCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS-3UTR CAA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCACGGTCCAGGTCATACTaGATGCCTGTGGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GTGTGLEPTPALPGATSPRSRSY*MPVGPV
Trigger: CACGGGCCCCACAGGCATCAAGTATGACCTGGACCG...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGTTGTCCTGCGCGTTCTaGGTGAGCCGCTGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLLSCAF*VSRCRS
Trigger: GCTCCGGCAGCGGCTCACCAAGAACGCGCAGGACAA...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTTCTCCGCGCTCAGGTaGCCCGTCAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEFSALR*PVRCSS
Trigger: GGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGAA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAAGTGACTGCAGCACGTaGTTGCCCAGGTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GTGTGLEPTPALPGATSPSDCST*LPRCRA
Trigger: GGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACT...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp TGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTTGTTaGCCAGGTGCAGGGCCCGCAGCTTCCGGCACTGGAAGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: WSARPPWRAVTAARC*PGAGPAASGTGRAP
Trigger: CGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 90 bp AGCTCCACAGGCAGGCACTCCAGCCGGTTGCCCCGCAGCTCGATCTaGGTCAGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: SSTGRHSSRLPRSSI*VRLVSSPTLEGSDC
Trigger: GCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCCTGTGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 90 bp TGCCCCGCAGCTCGATCTGCGTCAGGTTGGTCAGCTCGCCCACCCTaGAGGGCAGTGACTGCAGCACGTTGTTGCCCAGGTGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: CPAARSASGWSARPP*RAVTAARCCPGAGP
Trigger: GGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 90 bp TGCAGCACGTTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGCGTCTCGATCTGCCTTGGCCACGCC +
Preference number: 5 (lower is better)
Translates to: CSTLLPRCRARSFRH*KSSGGSVSICLGHA
Trigger: GGCGTGGCCAAGGCAGATCGAGACGCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492784.1
CDS-3UTR CAA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTCGGTCCAGGTCATACTaGATGCCTGTGGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TRCRLGCVHSRRQGREPARSRSY*MPVGPV
Trigger: CACGGGCCCCACAGGCATCAAGTATGACCTGGACCG...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTAGGTGCAGCTCCAGCTaGTCCTGCGCGTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTRCSSS*SCAFLV
Trigger: CACCAAGAACGCGCAGGACAAGCTGGAGCTGCACCT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTTGAGCCGCAGCACCTaGAGGCGTTTGAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAELSRST*RRLSSR
Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGAGTGACTGCAGCACGTaGTTGCCCAGGTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAESDCST*LPRCRA
Trigger: GGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACT...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCTCGGGTGGCAGTGTGTaGAACAGGTCCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRASGGSV*NRSSST
Trigger: GGTGGAGGAGGACCTGTTCAACACACTGCCACCCGA...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp CTCGATCTGCGTCAGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTaGCTGCAGCACGTTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCG +
Preference number: 5 (lower is better)
Translates to: LDLRQVGQLAHPGGQ*LQHVVAQVQGPQLP
Trigger: CGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 90 bp ATCTGCGTCAGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTaGAGCACGTTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCAC +
Preference number: 5 (lower is better)
Translates to: ICVRLVSSPTLEGSD*STLLPRCRARSFRH
Trigger: GTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 90 bp TGCAGCACGTTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGCGTCTCGATCCGGTTGGCCGTGATG +
Preference number: 5 (lower is better)
Translates to: CSTLLPRCRARSFRH*KSSGGSVSIRLAVM
Trigger: CATCACGGCCAACCGGATCGAGACGCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 90 bp GCAGGCACTCCAGCCGGTTGCCCCGCAGCTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTTGT +
Preference number: 5 (lower is better)
Translates to: AGTPAGCPAARSASG*SARPPWRAVTAARC
Trigger: ACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS-3UTR CAA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGAGCCGCTGCCGGAGCTaGTCCAGCGTCCACTCGTTG +
Preference number: 5 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKSRCRS*SSVHSL
Trigger: CAACGAGTGGACGCTGGACAAGCTCCGGCAGCGGCT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACATGGACCCATTCATCTaGCTGAAGGCCGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: QPPGADWAVCTPGARDGNMDPFI*LKAGLG
Trigger: CCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCAT...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGTTCAGCTGCCGCAGCTaGTTCTCACTCACCTCCGAC +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAEFSCRS*FSLTSD
Trigger: GTCGGAGGTGAGTGAGAACAAGCTGCGGCAGCTGAA...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTTTGATGTCGGTGAACTaGATGTGCAGCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TRCRLGCVHSRRQGREPALMSVN*MCSARR
Trigger: CCTGCGGGCGCTGCACATCAAGTTCACCGACATCAA...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAGACTGCAGCACGTTGTaGCCCAGGTGCAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGDCSTL*PRCRAR
Trigger: GCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTC...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGGCGCCTCCTTTTGTTaGTCCCTCACTGCACCACTC +
Preference number: 5 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRGASFC*SLTAPL
Trigger: GAGTGGTGCAGTGAGGGACAAACAAAAGGAGGCGCC...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372600.9
CDS GCA 90 bp TCCTTCTTGTCCAGCACGCCCGTCTCTGAGCGGTCCACGATACCCTaGTCGATCCGTGACTTGGTCCGCTGCAGCATGGGCACGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SFLSSTPVSERSTIP*SIRDLVRCSMGTVA
Trigger: GGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAGAGACGGGCGTGCTGGACAAGAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATCATTGCAGGAGTCCTaGGTGACCCACTTACAAGGC +
Preference number: 5 (lower is better)
Translates to: GTGTGLEPTPALPGATSPSLQES*VTHLQG
Trigger: GCCTTGTAAGTGGGTCACCAAGGACTCCTGCAATGA...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCTGGTGCGCGGGAATTaGAACCAGAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QPPGADWAVCTPGARDGNLVRGN*NQKLLQ
Trigger: CTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCAG...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCTGGTGCGCGGGAATTaGAACCAGAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: QAWPFQLEACSPVDRTAELVRGN*NQKLLQ
Trigger: CTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCAG...CTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATTGCTGAAGGCCGGCTaGGGGTCGCTCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGLLKAG*GSLSST
Trigger: GGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTGCTCGATCCGTGACTaGGTCCGCTGCAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRCSIRD*VRCSMG
Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCTCAAACGAGTACTTCTaGAGGGAGCGCCGTAGCATC +
Preference number: 5 (lower is better)
Translates to: PGTGTGLEPTPALPGATSSNEYF*RERRSI
Trigger: GATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTGA...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCCACAGCGGGATCTCCTaGATGTCGGTGAACTTGATG +
Preference number: 5 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRAHSGIS*MSVNLM
Trigger: CATCAAGTTCACCGACATCAAGGAGATCCCGCTGTG...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAGCACCTTGAGGCGTTaGAGCTCCCGCAGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGSTLRR*SSRSPS
Trigger: CGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTTGCTTAGGTTGCTCTaGAGCCGCAGCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QPPGADWAVCTPGARDGNLLRLL*SRSTLR
Trigger: CCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAACCACCTGTGGCAGCTaGCTTAGGTTGCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRTTCGS*LRLLLS
Trigger: GCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCAGCTTGGTGCCCTCATaGTTGATGGACAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRASLVPS*LMDSFC
Trigger: GCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCT...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCAAGGTTCGCCATCTTCTaGAGGCTGTTGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: GTGTGLEPTPALPGATSPRFAIF*RLLRTM
Trigger: CATCGTCCTCAACAGCCTCAAGAAGATGGCGAACCT...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp CCAGGCCTGGACCTCACTGGATCTCGCCTCGCCCTCGGGCCCACCTaGATGCACAGGACTGGGACAGGGTCTGGGTTCTTAGATTCCGGA +
Preference number: 5 (lower is better)
Translates to: PGLDLTGSRLALGPT*MHRTGTGSGFLDSG
Trigger: TCCGGAATCTAAGAACCCAGACCCTGTCCCAGTCCTGTGCATTCAGGTGGGCCCGAGGGCGAGGCGAGATCCAGTGAGGTCCAGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS TCA 90 bp GCAGGAGGCCGATGTCGGCAGGGAGGAAGGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCTTGCGGCAGTAGAAGAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGGRCRQGGRSGCCG*GPGSAACGSRRAGW
Trigger: CCACCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCTGCCGACATCGGCCTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp TCTGAGCGGTCCACGATACCCTGCTCGATCCGTGACTTGGTCCGCTaGAGCATGGGCACGGTGGCCTCCACGTCCTCACTGACGGTCGAT +
Preference number: 5 (lower is better)
Translates to: SERSTIPCSIRDLVR*SMGTVASTSSLTVD
Trigger: ATCGACCGTCAGTGAGGACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp CGCTGCCTCCCTGGAGGAGAGAGTACATGGCATCTGGAGAAGGCTTaGGGGCTCGGCATGGCGAGATCCAGAGCCAGAGAGGGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RCLPGGESTWHLEKA*GLGMARSRAREGKW
Trigger: CCACTTCCCCTCTCTGGCTCTGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGGGAGGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS-3UTR CAA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTTGAGCCGCAGCACCTaGAGGCGTTTGAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVALSRST*RRLSSR
Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCTTGAGGACGATGAGCTaGGTGCCCTCATTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGTGTGLEPTPALPGATSLRTMS*VPSLLM
Trigger: CATCAACAATGAGGGCACCAAGCTCATCGTCCTCAA...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCCAGCCCGGCACTGCTGGGTGACCGTCCCATGGCTGGTTCGCCCCGGACCACTATCTTCTTGAGGCTGTaGAGGACGATGAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PSPALLGDRPMAGSPRTTIFLRL*RTMSLV
Trigger: CACCAAGCTCATCGTCCTCAACAGCCTCAAGAAGAT...AGTGGTCCGGGGCGAACCAGCCATGGGACGGTCACCCAGCAGTGCCGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGAGCGTCTCGATCCGGTaGGCCGTGATGGCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRSVSIR*AVMARF
Trigger: GAACCTAGCCATCACGGCCAACCGGATCGAGACGCT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp GGGCAATGCTGGGCGGGATGGTCACGTCGGGGATCAGCTCCAGCTTaGGGACCTCCAGCTCCACCAGGTCAAACACAGTGTCAGGGATGC +
Preference number: 5 (lower is better)
Translates to: GQCWAGWSRRGSAPA*GPPAPPGQTQCQGC
Trigger: GCATCCCTGACACTGTGTTTGACCTGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCCCCGACGTGACCATCCCGCCCAGCATTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 90 bp CTCCGGAGGGAGCGTCTCGATCTGCCTTGGCCACGCCAGGCCCCGTaGCCTCACCTGATGGCTAATCGTGGTCTCTTAACAGCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LRRERLDLPWPRQAP*PHLMANRGLLTALF
Trigger: GAAGAGAGCTGTTAAGAGACCACGATTAGCCATCAGGTGAGGCCACGGGGCCTGGCGTGGCCAAGGCAGATCGAGACGCTCCCTCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492784.1
CDS-3UTR CAA 90 bp GGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAGCCACGGTCGATGACTTTTaGTCCATGGACCCATTCATC +
Preference number: 5 (lower is better)
Translates to: GLAFPAGGLLSRGPHRRATVDDF*SMDPFI
Trigger: GATGAATGGGTCCATGGACAAAAAGTCATCGACCGT...GGCTCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTTGTCCTGCGCGTTCTaGGTGAGCCGCTGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVLSCAF*VSRCRS
Trigger: GCTCCGGCAGCGGCTCACCAAGAACGCGCAGGACAA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTAGGTGCAGCTCCAGCTaGTCCTGCGCGTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVARCSSS*SCAFLV
Trigger: CACCAAGAACGCGCAGGACAAGCTGGAGCTGCACCT...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGAGCACCTTGAGGCGTTaGAGCTCCCGCAGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWSTLRR*SSRSPS
Trigger: CGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGATTGAGGACGATGAGCTaGGTGCCCTCATTGTTGATG +
Preference number: 5 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRLRTMS*VPSLLM
Trigger: CATCAACAATGAGGGCACCAAGCTCATCGTCCTCAA...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACATCTTCTTGAGGCTGTaGAGGACGATGAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QPPGADWAVCTPGARDGNIFLRL*RTMSLV
Trigger: CACCAAGCTCATCGTCCTCAACAGCCTCAAGAAGAT...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CAGCCACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACTTGAGGTTGTTGTCCTaGAGGTCAATCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QPPGADWAVCTPGARDGNLRLLS*RSISCR
Trigger: CCTGCAGGAGATTGACCTCAAGGACAACAACCTCAA...GTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCATGGTCTTGAGGTTGTaGTCCTTGAGGTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: PGTGTGLEPTPALPGATSMVLRL*SLRSIS
Trigger: GGAGATTGACCTCAAGGACAACAACCTCAAGACCAT...GGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGGACGGGAACCGGCTTGGAACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATCGATGGTCTTGAGGTaGTTGTCCTTGAGGTCAATC +
Preference number: 5 (lower is better)
Translates to: GTGTGLEPTPALPGATSPSMVLR*LSLRSI
Trigger: GATTGACCTCAAGGACAACAACCTCAAGACCATCGA...TGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGGACTGCAGCACGTTGTaGCCCAGGTGCAGGGCCCGC +
Preference number: 5 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWDCSTL*PRCRAR
Trigger: GCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTC...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGAGGCACTCCAGCCGGTaGCCCCGCAGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGRHSSR*PRSSIC
Trigger: GCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCT...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGATCGGGTGGCAGTGTGTaGAACAGGTCCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGSGGSV*NRSSST
Trigger: GGTGGAGGAGGACCTGTTCAACACACTGCCACCCGA...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGGGGACGGGAACCGGCTaGGAACCAACGCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGGTGTG*EPTPAL
Trigger: GAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTCTCCGGCGCCTCCTTTaGTTTGTCCCTCACTGCACC +
Preference number: 5 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVALRRLL*FVPHCT
Trigger: GGTGCAGTGAGGGACAAACAAAAGGAGGCGCCGGAG...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372600.9
CDS GCA 90 bp AGCGTCTCGATCCGGTTGGCCGTGATGGCTAGGTTCTGGAGGTTCTaGAGGAGGCCGATGTCGGCAGGGAGGAAGGTCAGGTTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SVSIRLAVMARFWRF*RRPMSAGRKVRLLW
Trigger: CCACAACAACCTGACCTTCCTCCCTGCCGACATCGGCCTCCTGCAGAACCTCCAGAACCTAGCCATCACGGCCAACCGGATCGAGACGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 90 bp CACTGGATCTCGCCTCGCCCTCGGGCCCACCTGAATGCACAGGACTaGGACAGGGTCTGGGTTCTTAGATTCCGGACCGGTCTTCCCAAA +
Preference number: 5 (lower is better)
Translates to: HWISPRPRAHLNAQD*DRVWVLRFRTGLPK
Trigger: TTTGGGAAGACCGGTCCGGAATCTAAGAACCCAGACCCTGTCCCAGTCCTGTGCATTCAGGTGGGCCCGAGGGCGAGGCGAGATCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS CCA 90 bp GTGATCACTACGACACGGGTTTCGGGGAGCCAGGAGCTGGGAGAGTaGCCCAGCCACCAGAGAGAGCCAAAGGATCAGCAGGAGTTACCC +
Preference number: 5 (lower is better)
Translates to: VITTTRVSGSQELGE*PSHQREPKDQQELP
Trigger: GGGTAACTCCTGCTGATCCTTTGGCTCTCTCTGGTGGCTGGGCCACTCTCCCAGCTCCTGGCTCCCCGAAACCCGTGTCGTAGTGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAGGCAGGCAGATCATCTaGTCTTGGGTGACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGGRQII*SWVTCS
Trigger: GCTGCAGGTCACCCAAGACAAGATGATCTGCCTGCC...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGTCATTGCAGGAGTCCTaGGTGACCCACTTACAAGGC +
Preference number: 5 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKSLQES*VTHLQG
Trigger: GCCTTGTAAGTGGGTCACCAAGGACTCCTGCAATGA...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGAATTTGAACCAGAAGTaGCTGCAGGCCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLNLNQK*LQARKM
Trigger: CATCTTCCTGGCCTGCAGCAACTTCTGGTTCAAATT...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTTTGCTGAAGGCCGGCTaGGGGTCGCTCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTLLKAG*GSLSST
Trigger: GGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAA...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTCCTCTTGGCTCCTTAACACTGTGCGTGGAGAGGCAGGGCAGGCACGAGGAATGGACCCATTCATCTaGCTGAAGGCCGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GSSWLLNTVRGEAGQARGMDPFI*LKAGLG
Trigger: CCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCAT...TCCTCGTGCCTGCCCTGCCTCTCCACGCACAGTGTTAAGGAGCCAAGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAGGCCTGGCCTTTCCAGCTGGAGGCCTGCTCTCCCGTGGACCGCACCGCAGAACGGTCGATGACTTTTaGTCCATGGACCCATTCATC +
Preference number: 5 (lower is better)
Translates to: PGLAFPAGGLLSRGPHRRTVDDF*SMDPFI
Trigger: GATGAATGGGTCCATGGACAAAAAGTCATCGACCGT...TCTGCGGTGCGGTCCACGGGAGAGCAGGCCTCCAGCTGGAAAGGCCAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAAGCTAGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTTGATGAACTTGATCACCTaGATGATGGTCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: EARPAPPGLRTGQRSCCLMNLIT*MMVCRM
Trigger: CATGCGGCAGACCATCATCAAGGTGATCAAGTTCAT...CAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCTAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTGGACACACCCATGCCGCAGGCGGTGGGGAAACAAAGTCTGGGCGAAGTGGCTTTCAGCTGCCGCAGCTaGTTCTCACTCACCTCCGAC +
Preference number: 5 (lower is better)
Translates to: LDTPMPQAVGKQSLGEVAFSCRS*FSLTSD
Trigger: GTCGGAGGTGAGTGAGAACAAGCTGCGGCAGCTGAA...AGCCACTTCGCCCAGACTTTGTTTCCCCACCGCCTGCGGCATGGGTGTGTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGATTCTCCGCGCTCAGGTaGCCCGTCAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LETCSPPQALALGDVSLRFSALR*PVRCSS
Trigger: GGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGAA...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTAGCACCTTGAGGCGTTaGAGCTCCCGCAGCCCGTCG +
Preference number: 5 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTSTLRR*SSRSPS
Trigger: CGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACCCTG +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVSICVR*VSSPTL
Trigger: CAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAGAGTCTCCTCCCTCCTaGGCAGCTCCAGAACATTCC +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGESPPS*AAPEHS
Trigger: GGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTC...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCGGGACGGGAACCGGCTaGGAACCAACGCCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCGTGTG*EPTPAL
Trigger: GAGGGCAGGCGTTGGTTCCAAGCCGGTTCCCGTCCC...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp ACACAGCGTCCACGTAGTTGTACTGGTGCCGGTCCAGGTCATACTTaGTGCCTGTGGGGCCCGTGTCAGGGGTCGGCAGAATGGTGGAGT +
Preference number: 5 (lower is better)
Translates to: TQRPRSCTGAGPGHT*CLWGPCQGSAEWWS
Trigger: ACTCCACCATTCTGCCGACCCCTGACACGGGCCCCACAGGCATCAAGTATGACCTGGACCGGCACCAGTACAACTACGTGGACGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAGCAGATCATCTTGTCTaGGGTGACCTGCAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLADHLV*GDLQRP
Trigger: GGGACGCTGCAGGTCACCCAAGACAAGATGATCTGC...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGTCATTGCAGGAGTCCTaGGTGACCCACTTACAAGGC +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRSLQES*VTHLQG
Trigger: GCCTTGTAAGTGGGTCACCAAGGACTCCTGCAATGA...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTTGCTGAAGGCCGGCTaGGGGTCGCTCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TFPLADSHRNECLPRHMELLKAG*GSLSST
Trigger: GGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGATGCTCGATCCGTGACTaGGTCCGCTGCAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: LETCSPPQALALGDVSLRCSIRD*VRCSMG
Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCA...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTAGGTGCAGCTCCAGCTaGTCCTGCGCGTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVRCSSS*SCAFLV
Trigger: CACCAAGAACGCGCAGGACAAGCTGGAGCTGCACCT...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCACAGCGGGATCTCCTaGATGTCGGTGAACTTGATG +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRHSGIS*MSVNLM
Trigger: CATCAAGTTCACCGACATCAAGGAGATCCCGCTGTG...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTGGCAGCTTGCTTAGGTaGCTCTTGAGCCGCAGCACC +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVGSLLR*LLSRST
Trigger: GGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCC...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAACCACCTGTGGCAGCTaGCTTAGGTTGCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGTTCGS*LRLLLS
Trigger: GCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGAGCGTCTCGATCCGGTaGGCCGTGATGGCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWSVSIR*AVMARF
Trigger: GAACCTAGCCATCACGGCCAACCGGATCGAGACGCT...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAQRSCC*LCWAGL
Trigger: GAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTG...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGAATTTGAACCAGAAGTaGCTGCAGGCCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKNLNQK*LQARKM
Trigger: CATCTTCCTGGCCTGCAGCAACTTCTGGTTCAAATT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTGCTCGATCCGTGACTaGGTCCGCTGCAGCATGGGC +
Preference number: 5 (lower is better)
Translates to: TFPLADSHRNECLPRHMECSIRD*VRCSMG
Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCAGGTGCCGACTGGGCTGTGTGCACTCCAGGCGCCAGGGACGGGAACCGGCTATGATGAGGATGAACTaGATCACCTTGATGATGGTC +
Preference number: 5 (lower is better)
Translates to: TRCRLGCVHSRRQGREPAMMRMN*ITLMMV
Trigger: GACCATCATCAAGGTGATCAAGTTCATCCTCATCAT...AGCCGGTTCCCGTCCCTGGCGCCTGGAGTGCACACAGCCCAGTCGGCACCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCTTGAGCCGCAGCACCTaGAGGCGTTTGAGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCLSRST*RRLSSR
Trigger: GCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAA...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGATCTCCTCGATGGTCTaGAGGTTGTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRISSMV*RLLSLR
Trigger: CCTCAAGGACAACAACCTCAAGACCATCGAGGAGAT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCAGTGACTGCAGCACGTaGTTGCCCAGGTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCSDCST*LPRCRA
Trigger: GGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACCCTG +
Preference number: 5 (lower is better)
Translates to: TFPLADSHRNECLPRHMESICVR*VSSPTL
Trigger: CAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGACCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGPNTAL*RLALLH
Trigger: GTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGG...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp CTGCAGCATGGGCACGGTGGCCTCCACGTCCTCACTGACGGTCGATaGCTTTTTGTCCATGGACCCATTCATCTTGCTGAAGGCCGGCTT +
Preference number: 5 (lower is better)
Translates to: LQHGHGGLHVLTDGR*LFVHGPIHLAEGRL
Trigger: AAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAGGACGTGGAGGCCACCGTGCCCATGCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCCCGGAACGAATCATaGCAGGAGTCCTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWPRNES*QESLVT
Trigger: GGTCACCAAGGACTCCTGCAATGATTCGTTCCGGGG...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGCCCCGGAACGAATCATaGCAGGAGTCCTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGPRNES*QESLVT
Trigger: GGTCACCAAGGACTCCTGCAATGATTCGTTCCGGGG...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTCCCCGGAACGAATCATaGCAGGAGTCCTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSPRNES*QESLVT
Trigger: GGTCACCAAGGACTCCTGCAATGATTCGTTCCGGGG...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGTTCGCCCCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGATGAACTTGATCACCTaGATGATGGTCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: GSPRTTLLKSRWVLNARRMNLIT*MMVCRM
Trigger: CATGCGGCAGACCATCATCAAGGTGATCAAGTTCAT...CCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGGGGCGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGTTCAGCTGCCGCAGCTaGTTCTCACTCACCTCCGAC +
Preference number: 5 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWFSCRS*FSLTSD
Trigger: GTCGGAGGTGAGTGAGAACAAGCTGCGGCAGCTGAA...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAGCCGCTGCCGGAGCTaGTCCAGCGTCCACTCGTTG +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPASRCRS*SSVHSL
Trigger: CAACGAGTGGACGCTGGACAAGCTCCGGCAGCGGCT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTTTGATGTCGGTGAACTaGATGTGCAGCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSLMSVN*MCSARR
Trigger: CCTGCGGGCGCTGCACATCAAGTTCACCGACATCAA...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATTCTCCGCGCTCAGGTaGCCCGTCAGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAFSALR*PVRCSS
Trigger: GGAGCTGCACCTGACGGGCAACCTGAGCGCGGAGAA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTTGCTTAGGTTGCTCTaGAGCCGCAGCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVLLRLL*SRSTLR
Trigger: CCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTATCAATCTCCTGCAGGTaGTGGAGGCTGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLSISCR*WRLKME
Trigger: CTCCATCTTCAGCCTCCACAACCTGCAGGAGATTGA...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGATTGAGGTTGTTGTCCTaGAGGTCAATCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGLRLLS*RSISCR
Trigger: CCTGCAGGAGATTGACCTCAAGGACAACAACCTCAA...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCAAGGTCACACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAATCTCCTCGATGGTCTaGAGGTTGTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: PRSHQIRKTPCTLRPGKGISSMV*RLLSLR
Trigger: CCTCAAGGACAACAACCTCAAGACCATCGAGGAGAT...TCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGAGTCTCCTCCCTCCTaGGCAGCTCCAGAACATTCC +
Preference number: 5 (lower is better)
Translates to: PSLAAPEHSLWPTATEMSESPPS*AAPEHS
Trigger: GGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTC...ACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTGAGTCTCCTCCCTCCTaGGCAGCTCCAGAACATTCC +
Preference number: 5 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTESPPS*AAPEHS
Trigger: GGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTC...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACATGGACCCATTCATCTaGCTGAAGGCCGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: KYCALETCSPPQALALGDMDPFI*LKAGLG
Trigger: CCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCAT...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AACCAACGCCTGCCCTCCCAGGGGCGACCTCCCCATTCCCGACCAGCCTCTAAGATGATGAGGATGAACTaGATCACCTTGATGATGGTC +
Preference number: 5 (lower is better)
Translates to: NQRLPSQGRPPHSRPASKMMRMN*ITLMMV
Trigger: GACCATCATCAAGGTGATCAAGTTCATCCTCATCAT...CTTAGAGGCTGGTCGGGAATGGGGAGGTCGCCCCTGGGAGGGCAGGCGTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTACCACCTGTGGCAGCTaGCTTAGGTTGCTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTTTCGS*LRLLLS
Trigger: GCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAATCTTCTTGAGGCTGTaGAGGACGATGAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLIFLRL*RTMSLV
Trigger: CACCAAGCTCATCGTCCTCAACAGCCTCAAGAAGAT...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTCACTGGTCAATCTCCTGCAGGTaGTGGAGGCTGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: GCFAQGKLPPCPETPTHWSISCR*WRLKME
Trigger: CTCCATCTTCAGCCTCCACAACCTGCAGGAGATTGA...CCAGTGAGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp ACGATGAGCTTGGTGCCCTCATTGTTGATGGACAGCTTCTGCAGGTaGACGCCCACATCTGTGACCACCTGTGGCAGCTTGCTTAGGTTG +
Preference number: 5 (lower is better)
Translates to: TMSLVPSLLMDSFCR*TPTSVTTCGSLLRL
Trigger: CAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCTCATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 90 bp CAACCAGCCTCTGGTGAGCATCTACTCCATATGCGCCAGACACTGTaGAGAACTGTGCATGGGAGTGGCAGGGTAGGGAAAGCTGTGATC +
Preference number: 5 (lower is better)
Translates to: QPASGEHLLHMRQTL*RTVHGSGRVGKAVI
Trigger: GATCACAGCTTTCCCTACCCTGCCACTCCCATGCACAGTTCTGCACAGTGTCTGGCGCATATGGAGTAGATGCTCACCAGAGGCTGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS-3UTR CAA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGTCAAACGAGTACTTCTaGAGGGAGCGCCGTAGCATC +
Preference number: 5 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGSNEYF*RERRSI
Trigger: GATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTGA...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAGGCAGCTTGCTTAGGTaGCTCTTGAGCCGCAGCACC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAGSLLR*LLSRST
Trigger: GGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCC...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAAGCTTGGTGCCCTCATaGTTGATGGACAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LETCSPPQALALGDVSLRSLVPS*LMDSFC
Trigger: GCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCT...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAATGGTCTTGAGGTTGTaGTCCTTGAGGTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLMVLRL*SLRSIS
Trigger: GGAGATTGACCTCAAGGACAACAACCTCAAGACCAT...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAGGCAGGCAGATCATCTaGTCTTGGGTGACCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAGRQII*SWVTCS
Trigger: GCTGCAGGTCACCCAAGACAAGATGATCTGCCTGCC...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACAGGTTCGCCATCTTCTaGAGGCTGTTGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: KYCALETCSPPQALALGDRFAIF*RLLRTM
Trigger: CATCGTCCTCAACAGCCTCAAGAAGATGGCGAACCT...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCTGCGCCCAGGGAAAGGAAACACAGTTCAACGTCTGGCTGCTTTGCTCAAGGGTTGAGGTTGTTGTCCTaGAGGTCAATCTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PAPRERKHSSTSGCFAQGLRLLS*RSISCR
Trigger: CCTGCAGGAGATTGACCTCAAGGACAACAACCTCAA...CCCTTGAGCAAAGCAGCCAGACGTTGAACTGTGTTTCCTTTCCCTGGGCGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CACCAGATCCGGAAGACACCCTGCACCCTGCGCCCAGGGAAAGGAAACACAGTTTCGATGGTCTTGAGGTaGTTGTCCTTGAGGTCAATC +
Preference number: 5 (lower is better)
Translates to: HQIRKTPCTLRPGKGNTVSMVLR*LSLRSI
Trigger: GATTGACCTCAAGGACAACAACCTCAAGACCATCGA...AACTGTGTTTCCTTTCCCTGGGCGCAGGGTGCAGGGTGTCTTCCGGATCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGAGGCACTCCAGCCGGTaGCCCCGCAGCTCGATCTGC +
Preference number: 5 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRRHSSR*PRSSIC
Trigger: GCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCT...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 90 bp ATGTGGTTGTACCACAGCTTAAGGCAGGTGAGGCGGTGCAGGTGCTaGAAGCTGATGATCTCCTCGATGGTCTTGAGGTTGTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: MWLYHSLRQVRRCRC*KLMISSMVLRLLSL
Trigger: CAAGGACAACAACCTCAAGACCATCGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTACAACCACAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACTGGTGCGCGGGAATTaGAACCAGAAGTTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPALVRGN*NQKLLQ
Trigger: CTGCAGCAACTTCTGGTTCAAATTCCCGCGCACCAG...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ATTAGCCAACCCGAGTCTCCTCCCTCCTTGGCAGCTCCAGAACATTCCCTCTGGATGAACTTGATCACCTaGATGATGGTCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: ISQPESPPSLAAPEHSLWMNLIT*MMVCRM
Trigger: CATGCGGCAGACCATCATCAAGGTGATCAAGTTCAT...CCAGAGGGAATGTTCTGGAGCTGCCAAGGAGGGAGGAGACTCGGGTTGGCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGCCGCTGCCGGAGCTaGTCCAGCGTCCACTCGTTG +
Preference number: 5 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVSRCRS*SSVHSL
Trigger: CAACGAGTGGACGCTGGACAAGCTCCGGCAGCGGCT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTTGTCCTGCGCGTTCTaGGTGAGCCGCTGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVLSCAF*VSRCRS
Trigger: GCTCCGGCAGCGGCTCACCAAGAACGCGCAGGACAA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACATTCCCTCTGGCCGACAGCCACAGAAATGAGTGCCTGCCAAGACACATGGAGTTGAGGACGATGAGCTaGGTGCCCTCATTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TFPLADSHRNECLPRHMELRTMS*VPSLLM
Trigger: CATCAACAATGAGGGCACCAAGCTCATCGTCCTCAA...CTCCATGTGTCTTGGCAGGCACTCATTTCTGTGGCTGTCGGCCAGAGGGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACGTGAGTCTCAGAATGGTCTTGAGGTTGTaGTCCTTGAGGTCAATCTCC +
Preference number: 5 (lower is better)
Translates to: LETCSPPQALALGDVSLRMVLRL*SLRSIS
Trigger: GGAGATTGACCTCAAGGACAACAACCTCAAGACCAT...TCTGAGACTCACGTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp CCGGACCACTCTGCTGAAGTCCAGGTGGGTGTTAAATGCCCGGCGGCATCGCTAACATGTAACGGATTTTaGCTTCATGGTTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: PDHSAEVQVGVKCPAASLTCNGF*LHGCQR
Trigger: CCTCTGACAACCATGAAGCAAAAATCCGTTACATGT...TAGCGATGCCGCCGGGCATTTAACACCCACCTGGACTTCAGCAGAGTGGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 90 bp AACACCAAATCCACCCATCATCTCCGACAGTCAACCAGCCTCTGGTaGGCATCTACTCCATATGCGCCAGACACTGTGCAGAACTGTGCA +
Preference number: 5 (lower is better)
Translates to: NTKSTHHLRQSTSLW*ASTPYAPDTVQNCA
Trigger: TGCACAGTTCTGCACAGTGTCTGGCGCATATGGAGTAGATGCTCACCAGAGGCTGGTTGACTGTCGGAGATGATGGGTGGATTTGGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCGGTCCAGGTCATACTaGATGCCTGTGGGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRSRSY*MPVGPV
Trigger: CACGGGCCCCACAGGCATCAAGTATGACCTGGACCG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAGCTTGGTGCCCTCATaGTTGATGGACAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPASLVPS*LMDSFC
Trigger: GCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCATCAATCTCCTGCAGGTaGTGGAGGCTGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPASISCR*WRLKME
Trigger: CTCCATCTTCAGCCTCCACAACCTGCAGGAGATTGA...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACTCGATGGTCTTGAGGTaGTTGTCCTTGAGGTCAATC +
Preference number: 5 (lower is better)
Translates to: KYCALETCSPPQALALGDSMVLR*LSLRSI
Trigger: GATTGACCTCAAGGACAACAACCTCAAGACCATCGA...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACCCTG +
Preference number: 5 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRSICVR*VSSPTL
Trigger: CAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGA...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCACCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPAPNTAL*RLALLH
Trigger: GTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGG...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACGTCTGGCTGCTTTGCTCAAGGGAAACTGCCACCCTGCCCTGAGACTCCAACTATGATGAGGATGAACTaGATCACCTTGATGATGGTC +
Preference number: 5 (lower is better)
Translates to: TSGCFAQGKLPPCPETPTMMRMN*ITLMMV
Trigger: GACCATCATCAAGGTGATCAAGTTCATCCTCATCAT...AGTTGGAGTCTCAGGGCAGGGTGGCAGTTTCCCTTGAGCAAAGCAGCCAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGGGCAGCTTGCTTAGGTaGCTCTTGAGCCGCAGCACC +
Preference number: 5 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRGSLLR*LLSRST
Trigger: GGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCC...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTCGGGTGGCAGTGTGTaGAACAGGTCCTCCTCCACC +
Preference number: 5 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVSGGSV*NRSSST
Trigger: GGTGGAGGAGGACCTGTTCAACACACTGCCACCCGA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTGCAGATCATCTTGTCTaGGGTGACCTGCAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCADHLV*GDLQRP
Trigger: GGGACGCTGCAGGTCACCCAAGACAAGATGATCTGC...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GAACAAATAGAACTCCTGGACCAAGGTCACACCAGATCCGGAAGACACCCTGCAAATTTGAACCAGAAGTaGCTGCAGGCCAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: EQIELLDQGHTRSGRHPANLNQK*LQARKM
Trigger: CATCTTCCTGGCCTGCAGCAACTTCTGGTTCAAATT...TGCAGGGTGTCTTCCGGATCTGGTGTGACCTTGGTCCAGGAGTTCTATTTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCTTGATGTCGGTGAACTaGATGTGCAGCGCCCGCAGG +
Preference number: 5 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVLMSVN*MCSARR
Trigger: CCTGCGGGCGCTGCACATCAAGTTCACCGACATCAA...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGTCCAGGTTGGTGAGGTaGCCGATCTGGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRSRLVR*PIWMGM
Trigger: CATCCCCATCCAGATCGGCAACCTCACCAACCTGGA...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTTCCAGGTTGGTGAGGTaGCCGATCTGGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCSRLVR*PIWMGM
Trigger: CATCCCCATCCAGATCGGCAACCTCACCAACCTGGA...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp AAATACTGCGCTCTTGAGACTTGCTCTCCTCCACAAGCACTTGCCCTGGGGGACACATGTAACGGATTTTaGCTTCATGGTTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: KYCALETCSPPQALALGDTCNGF*LHGCQR
Trigger: CCTCTGACAACCATGAAGCAAAAATCCGTTACATGT...GTCCCCCAGGGCAAGTGCTTGTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTGGGGAAACAAAGTCTGGGCGAAGTGGCTCCTCTTGGCTCCTTAACACTGTGCACATGTAACGGATTTTaGCTTCATGGTTGTCAGAGG +
Preference number: 5 (lower is better)
Translates to: VGKQSLGEVAPLGSLTLCTCNGF*LHGCQR
Trigger: CCTCTGACAACCATGAAGCAAAAATCCGTTACATGT...GCACAGTGTTAAGGAGCCAAGAGGAGCCACTTCGCCCAGACTTTGTTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACTGTGACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGTTGCTTAGGTTGCTCTaGAGCCGCAGCACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: TVTESTSSDPHVTDFCFMLLRLL*SRSTLR
Trigger: CCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAA...CATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTCACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCAGAGGTCAAACGAGTACTTCTaGAGGGAGCGCCGTAGCATC +
Preference number: 5 (lower is better)
Translates to: VYKFRPTCNGFLLHGCQRSNEYF*RERRSI
Trigger: GATGCTACGGCGCTCCCTCAAGAAGTACTCGTTTGA...CCTCTGACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTAGGTTCGCCATCTTCTaGAGGCTGTTGAGGACGATG +
Preference number: 5 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCRFAIF*RLLRTM
Trigger: CATCGTCCTCAACAGCCTCAAGAAGATGGCGAACCT...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp GACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCCAAATACTGCGCTCTaGAGACTTGCTCTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: DRVYKFRPTCNGFLLHGCPNTAL*RLALLH
Trigger: GTGGAGGAGAGCAAGTCTCAAGAGCGCAGTATTTGG...ACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAGCAGATCATCTTGTCTaGGGTGACCTGCAGCGTCCC +
Preference number: 5 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGADHLV*GDLQRP
Trigger: GGGACGCTGCAGGTCACCCAAGACAAGATGATCTGC...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp ACCGAGTCTACAAGTTCAGACCCACATGTAACGGATTTTTGCTTCATGGTTGTCACGGTCGATGACTTTTaGTCCATGGACCCATTCATC +
Preference number: 5 (lower is better)
Translates to: TESTSSDPHVTDFCFMVVTVDDF*SMDPFI
Trigger: GATGAATGGGTCCATGGACAAAAAGTCATCGACCGT...GACAACCATGAAGCAAAAATCCGTTACATGTGGGTCTGAACTTGTAGACTCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS-3UTR CAA 90 bp TTATTTCTGAGGATTATATCCAATGACACGACGCAGAAAACACAAATGGACGGAATCTCCTCGATGGTCTaGAGGTTGTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LFLRIISNDTTQKTQMDGISSMV*RLLSLR
Trigger: CCTCAAGGACAACAACCTCAAGACCATCGAGGAGAT...TCCGTCCATTTGTGTTTTCTGCGTCGTGTCATTGGATATAATCCTCAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 72 bp GCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTaGTTGCTGTGCTGGGCCGGCCTCGCTCAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: APPGLRTGQRSC*LLCWAGLAQAC
Trigger: GCAGGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 90 bp AGGCCTGCCCCTCCGGGCCTGAGGACTGGGCAGCGGTCCTGCTGCTaGCTGTGCTGGGCCGGCCTCGCTCAGGCCTGCTCCTTGTCAGCC +
Preference number: 6 (lower is better)
Translates to: RPAPPGLRTGQRSCC*LCWAGLAQACSLSA
Trigger: GGCTGACAAGGAGCAGGCCTGAGCGAGGCCGGCCCAGCACAGCAAGCAGCAGGACCGCTGCCCAGTCCTCAGGCCCGGAGGGGCAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 72 bp GGCAGGCACTCCAGCCGGTTGCCCCGCAGCTCGATCTaGGTCAGGTTGGTCAGCTCGCCCACCCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GRHSSRLPRSSI*VRLVSSPTLEG
Trigger: GCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 90 bp AGCAGTGGGCACTCGCCCAGCTCCACAGGCAGGCACTCCAGCCGGTaGCCCCGCAGCTCGATCTGCGTCAGGTTGGTCAGCTCGCCCACC +
Preference number: 6 (lower is better)
Translates to: SSGHSPSSTGRHSSR*PRSSICVRLVSSPT
Trigger: GGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTGCCCACTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 90 bp GGCAGGCACTCCAGCCGGTTGCCCCGCAGCTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTTG +
Preference number: 6 (lower is better)
Translates to: GRHSSRLPRSSICVR*VSSPTLEGSDCSTL
Trigger: CAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS TCA 72 bp CGTCAGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTaGCTGCAGCACGTTGTTGCCCAGGTGCAGGGCCCG +
Preference number: 6 (lower is better)
Translates to: RQVGQLAHPGGQ*LQHVVAQVQGP
Trigger: CGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 72 bp AGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTaGAGCACGTTGTTGCCCAGGTGCAGGGCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RLVSSPTLEGSD*STLLPRCRARS
Trigger: GCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 72 bp CCAGCCGGTTGCCCCGCAGCTCGATCTGCGTCAGGTTaGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCA +
Preference number: 6 (lower is better)
Translates to: PAGCPAARSASG*SARPPWRAVTA
Trigger: TGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 72 bp GTCCTCCTCCACCACCAAGCCGCTGCGCTTGAGCAGTaGGCACTCGCCCAGCTCCACAGGCAGGCACTCCAG +
Preference number: 6 (lower is better)
Translates to: VLLHHQAAALEQ*ALAQLHRQALQ
Trigger: CTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTGCCCACTGCTCAAGCGCAGCGGCTTGGTGGTGGAGGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 72 bp TCCAGCCGGTTGCCCCGCAGCTCGATCTGCGTCAGGTaGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGC +
Preference number: 6 (lower is better)
Translates to: SSRLPRSSICVR*VSSPTLEGSDC
Trigger: GCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 72 bp CACTCGCCCAGCTCCACAGGCAGGCACTCCAGCCGGTaGCCCCGCAGCTCGATCTGCGTCAGGTTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: HSPSSTGRHSSR*PRSSICVRLVS
Trigger: GCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCCTGTGGAGCTGGGCGAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 90 bp TTGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTTGTaGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTGGAAGAGCTCC +
Preference number: 6 (lower is better)
Translates to: LVSSPTLEGSDCSTL*PRCRARSFRHWKSS
Trigger: GGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CAA 90 bp AGGTTGGTCAGCTCGCCCACCCTGGAGGGCAGTGACTGCAGCACGTaGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTGGAAGAGC +
Preference number: 6 (lower is better)
Translates to: RLVSSPTLEGSDCST*LPRCRARSFRHWKS
Trigger: GCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS GCA 72 bp ACTCGCCCAGCTCCACAGGCAGGCACTCCAGCCGGTTaGCCCGCAGCTCGATCTGCGTCAGGTTGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: TRPAPQAGTPAG*PAARSASGWSA
Trigger: AGCTGACCAACCTGACGCAGATCGAGCTGCGGGGCAACCGGCTGGAGTGCCTGCCTGTGGAGCTGGGCGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 72 bp TTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGCGTCTCGATCCGGTTG +
Preference number: 6 (lower is better)
Translates to: LLPRCRARSFRH*KSSGGSVSIRL
Trigger: CAACCGGATCGAGACGCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp ACGCCCGTCTCTGAGCGGTCCACGATACCCTGCTCGATCCGTGACTaGGTCCGCTGCAGCATGGGCACGGTGGCCTCCACGTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: TPVSERSTIPCSIRD*VRCSMGTVASTSSL
Trigger: CAGTGAGGACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAGAGACGGGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 72 bp TCCAGCACGCCCGTCTCTGAGCGGTCCACGATACCCTaGTCGATCCGTGACTTGGTCCGCTGCAGCATGGGC +
Preference number: 6 (lower is better)
Translates to: SSTPVSERSTIP*SIRDLVRCSMG
Trigger: GCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAGAGACGGGCGTGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp CTGAGCGGTCCACGATACCCTGCTCGATCCGTGACTTaGTCCGCTGCAGCATGGGCACGGTGGCCTCCACGT +
Preference number: 6 (lower is better)
Translates to: LSGPRYPARSVT*SAAAWARWPPR
Trigger: ACGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp TTGTTGCCCAGGTGCAGGGCCCGCAGCTTCCGGCACTaGAAGAGCTCCGGAGGGAGCGTCTCGATCTGCCTT +
Preference number: 6 (lower is better)
Translates to: LLPRCRARSFRH*KSSGGSVSICL
Trigger: AAGGCAGATCGAGACGCTCCCTCCGGAGCTCTTCCAGTGCCGGAAGCTGCGGGCCCTGCACCTGGGCAACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492784.1
CDS CAA 72 bp TCTGAGCGGTCCACGATACCCTGCTCGATCCGTGACTaGGTCCGCTGCAGCATGGGCACGGTGGCCTCCACG +
Preference number: 6 (lower is better)
Translates to: SERSTIPCSIRD*VRCSMGTVAST
Trigger: CGTGGAGGCCACCGTGCCCATGCTGCAGCGGACCAAGTCACGGATCGAGCAGGGTATCGTGGACCGCTCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 72 bp ACAGGTGCAGCTCCAGCTTGTCCTGCGCGTTCTTGGTaGGCCGCTGCCGGAGCTTGTCCAGCGTCCACTCGT +
Preference number: 6 (lower is better)
Translates to: TGAAPACPARSW*AAAGACPASTR
Trigger: ACGAGTGGACGCTGGACAAGCTCCGGCAGCGGCTCACCAAGAACGCGCAGGACAAGCTGGAGCTGCACCTGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp TCGCCTCGCCCTCGGGCCCACCTGAATGCACAGGACTaGGACAGGGTCTGGGTTCTTAGATTCCGGACCGGT +
Preference number: 6 (lower is better)
Translates to: SPRPRAHLNAQD*DRVWVLRFRTG
Trigger: ACCGGTCCGGAATCTAAGAACCCAGACCCTGTCCCAGTCCTGTGCATTCAGGTGGGCCCGAGGGCGAGGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS CCA 72 bp GCTCGATCTGCGTCAGGTTGGTCAGCTCGCCCACCCTaGAGGGCAGTGACTGCAGCACGTTGTTGCCCAGGT +
Preference number: 6 (lower is better)
Translates to: ARSASGWSARPP*RAVTAARCCPG
Trigger: ACCTGGGCAACAACGTGCTGCAGTCACTGCCCTCCAGGGTGGGCGAGCTGACCAACCTGACGCAGATCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 72 bp CTCCATGGACGCTGCCTCCCTGGAGGAGAGAGTACATaGCATCTGGAGAAGGCTTGCGGGCTCGGCATGGCG +
Preference number: 6 (lower is better)
Translates to: LHGRCLPGGEST*HLEKACGLGMA
Trigger: CGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGGGAGGCAGCGTCCATGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CAA 90 bp ACGCCCACATCTGTGACCACCTGTGGCAGCTTGCTTAGGTTGCTCTaGAGCCGCAGCACCTTGAGGCGTTTGAGCTCCCGCAGCCCGTCG +
Preference number: 6 (lower is better)
Translates to: TPTSVTTCGSLLRLL*SRSTLRRLSSRSPS
Trigger: CGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp ACGCTGCCTCCCTGGAGGAGAGAGTACATGGCATCTGGAGAAGGCTaGCGGGCTCGGCATGGCGAGATCCAGAGCCAGAGAGGGGAAGTG +
Preference number: 6 (lower is better)
Translates to: TLPPWRREYMASGEG*RARHGEIQSQRGEV
Trigger: CACTTCCCCTCTCTGGCTCTGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGGGAGGCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS TCA 72 bp GACCTCACTGGATCTCGCCTCGCCCTCGGGCCCACCTaGATGCACAGGACTGGGACAGGGTCTGGGTTCTTA +
Preference number: 6 (lower is better)
Translates to: DLTGSRLALGPT*MHRTGTGSGFL
Trigger: TAAGAACCCAGACCCTGTCCCAGTCCTGTGCATTCAGGTGGGCCCGAGGGCGAGGCGAGATCCAGTGAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259324.5
CDS GCA 72 bp ATCCGGTTGGCCGTGATGGCTAGGTTCTGGAGGTTCTaGAGGAGGCCGATGTCGGCAGGGAGGAAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: IRLAVMARFWRF*RRPMSAGRKVR
Trigger: CCTGACCTTCCTCCCTGCCGACATCGGCCTCCTGCAGAACCTCCAGAACCTAGCCATCACGGCCAACCGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp GACGCTGCCTCCCTGGAGGAGAGAGTACATGGCATCTaGAGAAGGCTTGCGGGCTCGGCATGGCGAGATCCA +
Preference number: 6 (lower is better)
Translates to: DAASLEERVHGI*RRLAGSAWRDP
Trigger: TGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGGGAGGCAGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CAA 72 bp ATGAACAGGTGCAGCTCCAGCTTGTCCTGCGCGTTCTaGGTGAGCCGCTGCCGGAGCTTGTCCAGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: MNRCSSSLSCAF*VSRCRSLSSVH
Trigger: GTGGACGCTGGACAAGCTCCGGCAGCGGCTCACCAAGAACGCGCAGGACAAGCTGGAGCTGCACCTGTTCAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp CTGGGCGGGATGGTCACGTCGGGGATCAGCTCCAGCTaGAGGACCTCCAGCTCCACCAGGTCAAACACAGTG +
Preference number: 6 (lower is better)
Translates to: LGGMVTSGISSS*RTSSSTRSNTV
Trigger: CACTGTGTTTGACCTGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCCCCGACGTGACCATCCCGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp GGCAGCTTGCTTAGGTTGCTCTTGAGCCGCAGCACCTaGAGGCGTTTGAGCTCCCGCAGCCCGTCGATGACG +
Preference number: 6 (lower is better)
Translates to: GSLLRLLLSRST*RRLSSRSPSMT
Trigger: CGTCATCGACGGGCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp TGGGCAATGCTGGGCGGGATGGTCACGTCGGGGATCAGCTCCAGCTaGAGGACCTCCAGCTCCACCAGGTCAAACACAGTGTCAGGGATG +
Preference number: 6 (lower is better)
Translates to: WAMLGGMVTSGISSS*RTSSSTRSNTVSGM
Trigger: CATCCCTGACACTGTGTTTGACCTGGTGGAGCTGGAGGTCCTCAAGCTGGAGCTGATCCCCGACGTGACCATCCCGCCCAGCATTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp AGGTGCACGCCCACATCTGTGACCACCTGTGGCAGCTTGCTTAGGTaGCTCTTGAGCCGCAGCACCTTGAGGCGTTTGAGCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: RCTPTSVTTCGSLLR*LLSRSTLRRLSSRS
Trigger: GCTGCGGGAGCTCAAACGCCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 72 bp CCACGTAGTTGTACTGGTGCCGGTCCAGGTCATACTTaGTGCCTGTGGGGCCCGTGTCAGGGGTCGGCAGAA +
Preference number: 6 (lower is better)
Translates to: PRSCTGAGPGHT*CLWGPCQGSAE
Trigger: TTCTGCCGACCCCTGACACGGGCCCCACAGGCATCAAGTATGACCTGGACCGGCACCAGTACAACTACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 72 bp CCTGGAGGAGAGAGTACATGGCATCTGGAGAAGGCTTaGGGGCTCGGCATGGCGAGATCCAGAGCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PGGESTWHLEKA*GLGMARSRARE
Trigger: CTCTCTGGCTCTGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CCA 72 bp CTTGTCAGCCCTCCACAGCCGCTCCTTCACCTCGGGTaGCAGTGTGTTGAACAGGTCCTCCTCCACCACCAA +
Preference number: 6 (lower is better)
Translates to: LVSPPQPLLHLG*QCVEQVLLHHQ
Trigger: TTGGTGGTGGAGGAGGACCTGTTCAACACACTGCCACCCGAGGTGAAGGAGCGGCTGTGGAGGGCTGACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
ENST00000492784.1
CDS CCA 72 bp GTACATGGCATCTGGAGAAGGCTTGCGGGCTCGGCATaGCGAGATCCAGAGCCAGAGAGGGGAAGTGGCAAG +
Preference number: 6 (lower is better)
Translates to: VHGIWRRLAGSA*RDPEPERGSGK
Trigger: CTTGCCACTTCCCCTCTCTGGCTCTGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CAA 72 bp CCCTGGAGGAGAGAGTACATGGCATCTGGAGAAGGCTaGCGGGCTCGGCATGGCGAGATCCAGAGCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PWRREYMASGEG*RARHGEIQSQR
Trigger: TCTCTGGCTCTGGATCTCGCCATGCCGAGCCCGCAAGCCTTCTCCAGATGCCATGTACTCTCTCCTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS TCA 72 bp CGATGTCGGCAGGGAGGAAGGTCAGGTTGTTGTGGCTaGGGTCCAGGTAGCGCAGCTTGCGGCAGTAGAAGA +
Preference number: 6 (lower is better)
Translates to: RCRQGGRSGCCG*GPGSAACGSRR
Trigger: TCTTCTACTGCCGCAAGCTGCGCTACCTGGACCTCAGCCACAACAACCTGACCTTCCTCCCTGCCGACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp TTGTCCATGGACCCATTCATCTTGCTGAAGGCCGGCTaGGGGTCGCTCTCCTCCACCACTGTCTCCGACAGG +
Preference number: 6 (lower is better)
Translates to: LSMDPFILLKAG*GSLSSTTVSDR
Trigger: CCTGTCGGAGACAGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp AGGTGCACGCCCACATCTGTGACCACCTGTGGCAGCTaGCTTAGGTTGCTCTTGAGCCGCAGCACCTTGAGG +
Preference number: 6 (lower is better)
Translates to: RCTPTSVTTCGS*LRLLLSRSTLR
Trigger: CCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp GATGACTTTTTGTCCATGGACCCATTCATCTTGCTGAAGGCCGGCTaGGGGTCGCTCTCCTCCACCACTGTCTCCGACAGGGCCCTCGTG +
Preference number: 6 (lower is better)
Translates to: DDFLSMDPFILLKAG*GSLSSTTVSDRALV
Trigger: CACGAGGGCCCTGTCGGAGACAGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp AGCTTCTGCAGGTGCACGCCCACATCTGTGACCACCTGTGGCAGCTaGCTTAGGTTGCTCTTGAGCCGCAGCACCTTGAGGCGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: SFCRCTPTSVTTCGS*LRLLLSRSTLRRLS
Trigger: GCTCAAACGCCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCTGCAGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp CCCACATCTGTGACCACCTGTGGCAGCTTGCTTAGGTaGCTCTTGAGCCGCAGCACCTTGAGGCGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: PTSVTTCGSLLR*LLSRSTLRRLS
Trigger: GCTCAAACGCCTCAAGGTGCTGCGGCTCAAGAGCAACCTAAGCAAGCTGCCACAGGTGGTCACAGATGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 90 bp TCCTCACTGACGGTCGATGACTTTTTGTCCATGGACCCATTCATCTaGCTGAAGGCCGGCTTGGGGTCGCTCTCCTCCACCACTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SSLTVDDFLSMDPFI*LKAGLGSLSSTTVS
Trigger: GGAGACAGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS GCA 72 bp TTGGTGCCCTCATTGTTGATGGACAGCTTCTGCAGGTaGACGCCCACATCTGTGACCACCTGTGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LVPSLLMDSFCR*TPTSVTTCGSL
Trigger: CAAGCTGCCACAGGTGGTCACAGATGTGGGCGTGCACCTGCAGAAGCTGTCCATCAACAATGAGGGCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp CCAGGTAGCGCAGCTTGCGGCAGTAGAAGAGCTGGGTaGGGATCTTCTCGATCTTGTTGCGGTTCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: PGSAACGSRRAG*GSSRSCCGSGR
Trigger: TCTACCTGAACCGCAACAAGATCGAGAAGATCCCCACCCAGCTCTTCTACTGCCGCAAGCTGCGCTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp GCTGCCCAGCCCCGGAACGAATCATTGCAGGAGTCCTaGGTGACCCACTTACAAGGCAGGCAGATCATCTTG +
Preference number: 6 (lower is better)
Translates to: AAQPRNESLQES*VTHLQGRQIIL
Trigger: CAAGATGATCTGCCTGCCTTGTAAGTGGGTCACCAAGGACTCCTGCAATGATTCGTTCCGGGGCTGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp ACGGTCGATGACTTTTTGTCCATGGACCCATTCATCTaGCTGAAGGCCGGCTTGGGGTCGCTCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: TVDDFLSMDPFI*LKAGLGSLSST
Trigger: GGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATCGACCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 72 bp TCGATGACTTTTTGTCCATGGACCCATTCATCTTGCTaGAGGCCGGCTTGGGGTCGCTCTCCTCCACCACTG +
Preference number: 6 (lower is better)
Translates to: SMTFCPWTHSSC*RPAWGRSPPPL
Trigger: CAGTGGTGGAGGAGAGCGACCCCAAGCCGGCCTTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 72 bp GGGCACGGTGGCCTCCACGTCCTCACTGACGGTCGATaGCTTTTTGTCCATGGACCCATTCATCTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: GHGGLHVLTDGR*LFVHGPIHLAE
Trigger: TTCAGCAAGATGAATGGGTCCATGGACAAAAAGTCATCGACCGTCAGTGAGGACGTGGAGGCCACCGTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS TCA 72 bp TCCACCCATCATCTCCGACAGTCAACCAGCCTCTGGTaGGCATCTACTCCATATGCGCCAGACACTGTGCAG +
Preference number: 6 (lower is better)
Translates to: STHHLRQSTSLW*ASTPYAPDTVQ
Trigger: CTGCACAGTGTCTGGCGCATATGGAGTAGATGCTCACCAGAGGCTGGTTGACTGTCGGAGATGATGGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CCA 72 bp TACCACAGCTTAAGGCAGGTGAGGCGGTGCAGGTGCTaGAAGCTGATGATCTCCTCGATGGTCTTGAGGTTG +
Preference number: 6 (lower is better)
Translates to: YHSLRQVRRCRC*KLMISSMVLRL
Trigger: CAACCTCAAGACCATCGAGGAGATCATCAGCTTCCAGCACCTGCACCGCCTCACCTGCCTTAAGCTGTGGTA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CCA 72 bp ACTCCATATGCGCCAGACACTGTGCAGAACTGTGCATaGGAGTGGCAGGGTAGGGAAAGCTGTGATCACTAC +
Preference number: 6 (lower is better)
Translates to: TPYAPDTVQNCA*EWQGRESCDHY
Trigger: GTAGTGATCACAGCTTTCCCTACCCTGCCACTCCCATGCACAGTTCTGCACAGTGTCTGGCGCATATGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483638.1
CDS CAA 72 bp TTCGCCATCTTCTTGAGGCTGTTGAGGACGATGAGCTaGGTGCCCTCATTGTTGATGGACAGCTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: FAIFLRLLRTMS*VPSLLMDSFCR
Trigger: CCTGCAGAAGCTGTCCATCAACAATGAGGGCACCAAGCTCATCGTCCTCAACAGCCTCAAGAAGATGGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9
CDS CAA 72 bp CTGATGATCTCCTCGATGGTCTTGAGGTTGTTGTCCTaGAGGTCAATCTCCTGCAGGTTGTGGAGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LMISSMVLRLLS*RSISCRLWRLK
Trigger: CTTCAGCCTCCACAACCTGCAGGAGATTGACCTCAAGGACAACAACCTCAAGACCATCGAGGAGATCATCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259324.5
ENST00000372599.7
ENST00000372600.9