RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC75B (Homo sapiens)

Ensembl gene IDs: ENSG00000178026

Ensembl transcript IDs: ENST00000318753.13, ENST00000404045.6, ENST00000446942.5, ENST00000460524.5, ENST00000464490.1, ENST00000465334.1, ENST00000491910.5, ENST00000495297.5

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGGAGGAGGCCAGACCAGGCCCCTCGAGGGAGCCGTGCTCCACTaGCGCCAATCCCAGGGAGTAGGAACAAGCCAGGTCAGCGTGTTC +
Preference number: 1 (lower is better)
Translates to: GGGGQTRPLEGAVLH*RQSQGVGTSQVSVF
Trigger: GAACACGCTGACCTGGCTTGTTCCTACTCCCTGGGATTGGCGTCAGTGGAGCACGGCTCCCTCGAGGGGCCTGGTCTGGCCTCCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 90 bp CCGTGGGCTAGGCGCAGAGTCCTAGGGGCCGACTGTGCAGAGACCTaGGCATTCAGAGCTGGCAGGGCCCAGAGCGGATACCCTGGTTTT +
Preference number: 1 (lower is better)
Translates to: PWARRRVLGADCAET*AFRAGRAQSGYPGF
Trigger: AAAACCAGGGTATCCGCTCTGGGCCCTGCCAGCTCTGAATGCCCAGGTCTCTGCACAGTCGGCCCCTAGGACTCTGCGCCTAGCCCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 90 bp TCTCTCTCAGTCCTAACTGGGCTCCGGCAGAGGCCCAGCTCAGGGTaGAATCCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCT +
Preference number: 1 (lower is better)
Translates to: SLSVLTGLRQRPSSG*NPRCAAHKAGTEHA
Trigger: AGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGGATTCCACCCTGAGCTGGGCCTCTGCCGGAGCCCAGTTAGGACTGAGAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR TCA 90 bp GGTCCAGCACCGCCAGCACAGCACCATGGCTGCTCAGGTAGCGTGTaGTGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTGAGAGGT +
Preference number: 1 (lower is better)
Translates to: GPAPPAQHHGCSGSV*CVARPVSTAGCLRG
Trigger: ACCTCTCAGGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTGGCGGTGCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR TCA 90 bp GCAGGGCCCAGAGCGGATACCCTGGTTTTGGTTGGGGACTCACTGTaGCTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCT +
Preference number: 1 (lower is better)
Translates to: AGPRADTLVLVGDSL*LGVWVRWLVTATHP
Trigger: AGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCGCTCTGGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 90 bp GCATTCAGAGCTGGCAGGGCCCAGAGCGGATACCCTGGTTTTGGTTaGGGACTCACTGTGACTAGGAGTCTGGGTCCGGTGGCTGGTCAC +
Preference number: 1 (lower is better)
Translates to: AFRAGRAQSGYPGFG*GLTVTRSLGPVAGH
Trigger: GTGACCAGCCACCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCGCTCTGGGCCCTGCCAGCTCTGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR TCA 90 bp CAGCTCAGGGTGGAATCCGAGGTGCGCGGCCCACAAAGCTGGCACTaGGCATGCTCCACTGCATCCTTTATCCAGTCCCTCTGTGAGCAG +
Preference number: 1 (lower is better)
Translates to: QLRVESEVRGPQSWH*ACSTASFIQSLCEQ
Trigger: CTGCTCACAGAGGGACTGGATAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGGATTCCACCCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 90 bp GTAATGTTTTACAGCACCACCACCTGGCTCTCTCTCAGTCCTAACTaGGCTCCGGCAGAGGCCCAGCTCAGGGTGGAATCCGAGGTGCGC +
Preference number: 1 (lower is better)
Translates to: VMFYSTTTWLSLSPN*APAEAQLRVESEVR
Trigger: GCGCACCTCGGATTCCACCCTGAGCTGGGCCTCTGCCGGAGCCCAGTTAGGACTGAGAGAGAGCCAGGTGGTGGTGCTGTAAAACATTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR TCA 90 bp GAGTGTTGTGATGCACAGATGCTGGGGATGTGTACTCTAAGGGCATaGGCCGCCTGTTGGAGAACTGGTGATGCATGGATGGCTCTCTGT +
Preference number: 1 (lower is better)
Translates to: ECCDAQMLGMCTLRA*AACWRTGDAWMALC
Trigger: ACAGAGAGCCATCCATGCATCACCAGTTCTCCAACAGGCGGCTCATGCCCTTAGAGTACACATCCCCAGCATCTGTGCATCACAACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGGGAGTGAGGTGCGCTaGCTCAGCCGCCGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGGSEVR*LSRRRR
Trigger: CCTGCGCCGGCGGCTGAGCCAGCGCACCTCACTCCC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGAGCCAGGTGGGTGGTaGGTCACCTGGCACAGCAGG +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGEPGGW*VTWHSR
Trigger: CCTGCTGTGCCAGGTGACCCACCACCCACCTGGCTC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR TCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCATCACTCAGCCCCGTaGAGCTCAGGTCCAGCACCG +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGHHSAP*SSGPAP
Trigger: CGGTGCTGGACCTGAGCTTCACGGGGCTGAGTGATG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCAATGAGCCAGGTGGGTaGTGGGTCACCTGGCACAGC +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGNEPGG*WVTWHS
Trigger: GCTGTGCCAGGTGACCCACCACCCACCTGGCTCATT...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTCTGGGTCCGGTGGCTaGTCACAGCCACACATCCTG +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGSGSGG*SQPHIL
Trigger: CAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR TCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCCACAAAGCTGGCACTaGGCATGCTCCACTGCATCC +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGPQSWH*ACSTAS
Trigger: GGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGTGTCGACAGCGGGATaGCTGAGAGGTCCACAGTCT +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGVSTAG*LRGPQS
Trigger: AGACTGTGGACCTCTCAGGCATCCCGCTGTCGACAC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCCACATCCACGTTGTTaGCCAGGTCCACCCAAGCCA +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGPHPRC*PGPPKP
Trigger: TGGCTTGGGTGGACCTGGGCAACAACGTGGATGTGG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCTGGGGCTGTGTCGATaGTCATGGCAGGACATCTGC +
Preference number: 2 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGLGLCR*SWQDIC
Trigger: GCAGATGTCCTGCCATGAGCATCGACACAGCCCCAG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR TCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCCACTGAGGGAAGGCTaGGCCTCTAGCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEPLREG*ASSQGW
Trigger: CCAGCCCTGGCTAGAGGCTCAGCCTTCCCTCAGTGG...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTGCGCCTGCGGGGTCTaGGTCTGGGCTGACAGGGCT +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDACACGV*VWADRA
Trigger: AGCCCTGTCAGCCCAGACCCAGACCCCGCAGGCGCA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CAA 90 bp GCCAAAGCAGGGAACTTGGTGGTGTCCTTGATGGCATCAGTGAGCTaGCGGGCAGTGGCCCGCGTCAGTCGGTTGCCGTTGAGCAGGAGC +
Preference number: 2 (lower is better)
Translates to: AKAGNLVVSLMASVS*RAVARVSRLPLSRS
Trigger: GCTCCTGCTCAACGGCAACCGACTGACGCGGGCCACTGCCCGCAAGCTCACTGATGCCATCAAGGACACCACCAAGTTCCCTGCTTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR TCA 90 bp CATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATCCACTGAGGGAAGGCTaGGCCTCTAGCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: HSPSWGTAGPGPGSQAGHPLREG*ASSQGW
Trigger: CCAGCCCTGGCTAGAGGCTCAGCCTTCCCTCAGTGG...ATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR TCA 90 bp TTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGCCGGACCGAGTGTTGTaGTGCACAGATGCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: LGHCRSRARFTSRSWEMGPDRVL*CTDAGD
Trigger: ATCCCCAGCATCTGTGCATCACAACACTCGGTCCGG...CCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR GCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTCCTTCTTGGGGCACTaGAGGTCCCGGGCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDASFLGH*RSRARF
Trigger: GAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCTCTGGGTCTTCCTCTaGCGCAGGCTGGACCCTTGC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDALWVFL*RRLDPC
Trigger: GCAAGGGTCCAGCCTGCGCCAGAGGAAGACCCAGAG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR TCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGTTGGGGACTCACTGTaGCTAGGAGTCTGGGTCCGG +
Preference number: 2 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLVGDSL*LGVWVR
Trigger: CCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAAC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR GCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTACCTAGGGGCCGACTGTaGAGAGACCTGGGCATTCAG +
Preference number: 2 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLPRGRL*RDLGIQ
Trigger: CTGAATGCCCAGGTCTCTGCACAGTCGGCCCCTAGG...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR GCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCTCTCCAAGCGAGACTaGGCCTGCGGGGTCTGGGTC +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCLSKRD*ACGVWV
Trigger: GACCCAGACCCCGCAGGCGCAGTCTCGCTTGGAGAG...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCCAGGGCTGGCCACCTaGCCACCTATGAGTCCATTC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAPGLAT*PPMSPF
Trigger: GAATGGACTCATAGGTGGCCAGGTGGCCAGCCCTGG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTACCAGGGCTGGCCACCTaGCCACCTATGAGTCCATTC +
Preference number: 2 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLPGLAT*PPMSPF
Trigger: GAATGGACTCATAGGTGGCCAGGTGGCCAGCCCTGG...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGGAGTCTGGGTCCGGTaGCTGGTCACAGCCACACAT +
Preference number: 2 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLGVWVR*LVTATH
Trigger: ATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCTGGGCATTCAGAGCTaGCAGGGCCCAGAGCGGATA +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDALGIQS*QGPERI
Trigger: TATCCGCTCTGGGCCCTGCCAGCTCTGAATGCCCAG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR GCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCGTCCACAGTCTCCCCTaGCAGCAGAGTCTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAVHSLP*QQSLLE
Trigger: CTCCAGAAGACTCTGCTGGCAGGGGAGACTGTGGAC...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGAGAACTGGTGATGCATaGATGGCTCTCTGTGGGCTG +
Preference number: 2 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDERTGDA*MALCGL
Trigger: CAGCCCACAGAGAGCCATCCATGCATCACCAGTTCT...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCTCTTGAGGCAGCTCTaGGTCTTCCTCTGGCGCAGG +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCLLRQL*VFLWRR
Trigger: CCTGCGCCAGAGGAAGACCCAGAGCTGCCTCAAGAG...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCTGTGTCGATGCTCATaGCAGGACATCTGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDALCRCS*QDICRC
Trigger: GCACCTGCAGATGTCCTGCCATGAGCATCGACACAG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCCAGAGCGGATACCCTaGTTTTGGTTGGGGACTCAC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAPERIP*FWLGTH
Trigger: GTGAGTCCCCAACCAAAACCAGGGTATCCGCTCTGG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR GCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTGTCCACAGTCTCCCCTaGCAGCAGAGTCTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCVHSLP*QQSLLE
Trigger: CTCCAGAAGACTCTGCTGGCAGGGGAGACTGTGGAC...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR GCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTAGCACACACAGCAGCTaGAAGCCCTGGCTGTTCCTG +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCSTHSS*KPWLFL
Trigger: CAGGAACAGCCAGGGCTTGCAGCTGCTGTGTGTGCT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGCTCATAGTCCTTCTTaGGGCACTGCAGGTCCCGGG +
Preference number: 2 (lower is better)
Translates to: LLLLRVRGEVVDELSADLAHSPS*GTAGPG
Trigger: CCCGGGACCTGCAGTGCCCCAAGAAGGACTATGAGC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTACAGCACCACCACCTaGCTCTCTCTCAGTCCTAAC +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAYSTTT*LSLSPN
Trigger: GTTAGGACTGAGAGAGAGCCAGGTGGTGGTGCTGTA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR TCA 90 bp GTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGCCCTTAATCTCAGGCTaGGCATTTACACTGGATTTC +
Preference number: 2 (lower is better)
Translates to: VPGQVHKQVMGDGVDRVEPLISG*AFTLDF
Trigger: GAAATCCAGTGTAAATGCTCAGCCTGAGATTAAGGG...CTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR TCA 90 bp CATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATCTGTTGGAGAACTGGTaGTGCATGGATGGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: HSPSWGTAGPGPGSQAGHLLENW*CMDGSL
Trigger: CAGAGAGCCATCCATGCATCACCAGTTCTCCAACAG...ATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR GCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCTGAGCATGCTCCACTaGATCCTTTATCCAGTCCCT +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDALSMLH*ILYPVP
Trigger: AGGGACTGGATAAAGGATGCAGTGGAGCATGCTCAG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTATGGATGGCTCTCTGTaGGCTGCCATGGTGTCTTGG +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCMDGSL*AAMVSW
Trigger: CCAAGACACCATGGCAGCCCACAGAGAGCCATCCAT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp AGCAGAGCCACCACCGGACCGAGTGTTGTGATGCACAGATGCTGGGGATGTGTACTGGTGATGCATGGATaGCTCTCTGTGGGCTGCCAT +
Preference number: 2 (lower is better)
Translates to: SRATTGPSVVMHRCWGCVLVMHG*LSVGCH
Trigger: ATGGCAGCCCACAGAGAGCCATCCATGCATCACCAG...TACACATCCCCAGCATCTGTGCATCACAACACTCGGTCCGGTGGTGGCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTTTCACAAGCAGGTCATaGGAGATGGGGTCGACCGGG +
Preference number: 2 (lower is better)
Translates to: LLLLRVRGEVVDELSADLFTSRS*EMGSTG
Trigger: CCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAA...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTACCCTGGTTTTGGTTaGGGACTCACTGTGACTAGG +
Preference number: 2 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAYPGFG*GLTVTR
Trigger: CCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGGATACCCTGGTTTTaGTTGGGGACTCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCRIPWF*LGTHCD
Trigger: GTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCG...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCATTTCTGGGGGCCTGTaGGTCCTCCTTGACCTTCAT +
Preference number: 2 (lower is better)
Translates to: VVDELSADLVRGLPELIVISGGL*VLLDLH
Trigger: ATGAAGGTCAAGGAGGACTCACAGGCCCCCAGAAAT...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCTGTACTCTAAGGGCATaGGCCGCCTGTTGGAGAACT +
Preference number: 2 (lower is better)
Translates to: VVDELSADLVRGLPELIVCTLRA*AACWRT
Trigger: AGTTCTCCAACAGGCGGCTCATGCCCTTAGAGTACA...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CCA 90 bp ATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGTAGAGGATATCTTTACACTGGATTTCTaGGGGCCTGTGAGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: MGDGVDRVEEGHISVEDIFTLDF*GPVSPP
Trigger: AGGAGGACTCACAGGCCCCCAGAAATCCAGTGTAAA...GATATCCTCTACAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCCCTTAATCTCAGGCTaGGCATTTACACTGGATTTC +
Preference number: 2 (lower is better)
Translates to: VVDELSADLVRGLPELIVPLISG*AFTLDF
Trigger: GAAATCCAGTGTAAATGCTCAGCCTGAGATTAAGGG...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR CCA 72 bp GCTCGGGTCCCAGCCCAGCAGCTGTGGAGTCCCAGGTaGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCT +
Preference number: 3 (lower is better)
Translates to: ARVPAQQLWSPR*RQGWWPRPHCP
Trigger: AGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCACCTGGGACTCCACAGCTGCTGGGCTGGGACCCGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CAA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGTCAGTCGGTTGCCGTaGAGCAGGAGCTGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGVSRLP*SRSWVR
Trigger: CCTCACCCAGCTCCTGCTCAACGGCAACCGACTGAC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR TCA 72 bp CTGTGGGTGCTGGGGCCCCTCCCACTGAGGGAAGGCTaGGCCTCTAGCCAGGGCTGGCCACCTGGCCACCTA +
Preference number: 3 (lower is better)
Translates to: LWVLGPLPLREG*ASSQGWPPGHL
Trigger: TAGGTGGCCAGGTGGCCAGCCCTGGCTAGAGGCTCAGCCTTCCCTCAGTGGGAGGGGCCCCAGCACCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318753.13
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CAA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTTCTGGAGGCTGCTCTaGAGGCAGCTCTGGGTCTTC +
Preference number: 3 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGFWRLL*RQLWVF
Trigger: GAAGACCCAGAGCTGCCTCAAGAGCAGCCTCCAGAA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR-3UTR CAA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGTAGCGTGTGATGTGTaGCACGTCCTGTGTCGACAG +
Preference number: 3 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGVACDV*HVLCRQ
Trigger: CTGTCGACACAGGACGTGCAACACATCACACGCTAC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR TCA 72 bp GGCCAGACCAGGCCCCTCGAGGGAGCCGTGCTCCACTaGCGCCAATCCCAGGGAGTAGGAACAAGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: GQTRPLEGAVLH*RQSQGVGTSQV
Trigger: GACCTGGCTTGTTCCTACTCCCTGGGATTGGCGTCAGTGGAGCACGGCTCCCTCGAGGGGCCTGGTCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 72 bp CACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATaGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACA +
Preference number: 3 (lower is better)
Translates to: HCRSRARFTSRS*EMGSTGLRKAT
Trigger: TGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR TCA 72 bp CCGCCAGCACAGCACCATGGCTGCTCAGGTAGCGTGTaGTGTGTTGCACGTCCTGTGTCGACAGCGGGATGC +
Preference number: 3 (lower is better)
Translates to: PPAQHHGCSGSV*CVARPVSTAGC
Trigger: GCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR GCA 72 bp AGCGTGTTCTTCTTCCTCTCACTCTCCAAGCGAGACTaGGCCTGCGGGGTCTGGGTCTGGGCTGACAGGGCT +
Preference number: 3 (lower is better)
Translates to: SVFFFLSLSKRD*ACGVWVWADRA
Trigger: AGCCCTGTCAGCCCAGACCCAGACCCCGCAGGCGCAGTCTCGCTTGGAGAGTGAGAGGAAGAAGAACACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 72 bp GCTGGCAGGGCCCAGAGCGGATACCCTGGTTTTGGTTaGGGACTCACTGTGACTAGGAGTCTGGGTCCGGTG +
Preference number: 3 (lower is better)
Translates to: AGRAQSGYPGFG*GLTVTRSLGPV
Trigger: CACCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCGCTCTGGGCCCTGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CCA 72 bp AGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTaGGGCTGTGTCGATGCTCATGGCAGGACATCTGCA +
Preference number: 3 (lower is better)
Translates to: SLGPVAGHSHTS*GCVDAHGRTSA
Trigger: TGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR TCA 72 bp GATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTaGGAGGTCCACAGTCTCCCCTGCCAGCAGAGTCTT +
Preference number: 3 (lower is better)
Translates to: DVLHVLCRQRDA*EVHSLPCQQSL
Trigger: AAGACTCTGCTGGCAGGGGAGACTGTGGACCTCTCAGGCATCCCGCTGTCGACACAGGACGTGCAACACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR TCA 72 bp AGAGCGGATACCCTGGTTTTGGTTGGGGACTCACTGTaGCTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCC +
Preference number: 3 (lower is better)
Translates to: RADTLVLVGDSL*LGVWVRWLVTA
Trigger: GGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR-3UTR CAA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTTCTTGGGGCAATGGGGTCGACCGGGTaGAGGAAGGCCACATCTCTG +
Preference number: 3 (lower is better)
Translates to: LSADLVRGLPELIVLLGAMGSTG*RKATSL
Trigger: CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCAT...TGCCCCAAGAAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
3UTR-3UTR CAA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTAGCTGTCGGCAGATCTaGTCCGAGGACTTCCAGAGC +
Preference number: 3 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCSCRQI*SEDFQS
Trigger: GCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
3UTR TCA 72 bp TACTCTAAGGGCATGAGCCGCCTGTTGGAGAACTGGTaGTGCATGGATGGCTCTCTGTGGGCTGCCATGGTG +
Preference number: 3 (lower is better)
Translates to: YSKGMSRLLENW*CMDGSLWAAMV
Trigger: CACCATGGCAGCCCACAGAGAGCCATCCATGCATCACCAGTTCTCCAACAGGCGGCTCATGCCCTTAGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTGGCCCCGGCCGCACTaGCCTCAGGCTCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGWPRPH*PQAQGP
Trigger: TGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCTGTCTCCCGGATCCTaGCGCAGGAGGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGLSPGS*RRRRSS
Trigger: GCTGCTGCGCCTCCTGCGCCAGGATCCGGGAGACAG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTGCGCCTGCGGGGTCTaGGTCTGGGCTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGCACGV*VWADRA
Trigger: AGCCCTGTCAGCCCAGACCCAGACCCCGCAGGCGCA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCCCTCGAGGGAGCCGTaGTCCACTGACGCCAATCCC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGPSREP*STDANP
Trigger: GGGATTGGCGTCAGTGGAGCACGGCTCCCTCGAGGG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGGAGCCGTGCTCCACTaGCGCCAATCCCAGGGAGTA +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGGAVLH*RQSQGV
Trigger: TACTCCCTGGGATTGGCGTCAGTGGAGCACGGCTCC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTCCCTAGACCAGCCCTaGGTCCTCTCTCCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGSLDQP*VLSPGS
Trigger: GGACCCTGGAGAGAGGACCCAGGGCTGGTCTAGGGA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGCTCATAGTCCTTCTTaGGGCACTGCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGAHSPS*GTAGPG
Trigger: CCCGGGACCTGCAGTGCCCCAAGAAGGACTATGAGC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTGGAGGCAGGGGTGGTaGCCCCGGCCGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGHCRSRARFTSRSWEMGWRQGW*PRPHCP
Trigger: AGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA...CCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCCAGGGCTGGCCACCTaGCCACCTATGAGTCCATTC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGPGLAT*PPMSPF
Trigger: GAATGGACTCATAGGTGGCCAGGTGGCCAGCCCTGG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCGTCCACAGTCTCCCCTaGCAGCAGAGTCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGVHSLP*QQSLLE
Trigger: CTCCAGAAGACTCTGCTGGCAGGGGAGACTGTGGAC...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp TTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGGCCGCTCGCGGAGCGTaGACTGGATCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LGHCRSRARFTSRSWEMGAARGA*TGSRGA
Trigger: GGCTCCGCGAGATCCAGTCCACGCTCCGCGAGCGGC...CCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGGGGAGTGAGGTGCGCTaGCTCAGCCGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEGSEVR*LSRRRR
Trigger: CCTGCGCCGGCGGCTGAGCCAGCGCACCTCACTCCC...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGTGGAGGCAGGGGTGGTaGCCCCGGCCGCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEWRQGW*PRPHCP
Trigger: AGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGTGGTGGGGAGTGAGGTaGGCTGGCTCAGCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEWWGVR*AGSAAG
Trigger: GCCGGCGGCTGAGCCAGCGCACCTCACTCCCCACCA...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp TTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGCGGAGCGTGGACTaGATCTCGCGGAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LGHCRSRARFTSRSWEMGSRSVD*ISRSHR
Trigger: GCGGTGGCTCCGCGAGATCCAGTCCACGCTCCGCGA...CCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCAGGTGGAGGCAGGGGTaGTGGCCCCGGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDARWRQG*WPRPHC
Trigger: GCAGTGCGGCCGGGGCCACCACCCCTGCCTCCACCT...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCCAGAGCGGATACCCTaGTTTTGGTTGGGGACTCAC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGPERIP*FWLGTH
Trigger: GTGAGTCCCCAACCAAAACCAGGGTATCCGCTCTGG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCTGTTGGAGAACTGGTaGTGCATGGATGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGLLENW*CMDGSL
Trigger: CAGAGAGCCATCCATGCATCACCAGTTCTCCAACAG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCCGGATACCCTGGTTTTaGTTGGGGACTCACTGTGAC +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGRIPWF*LGTHCD
Trigger: GTCACAGTGAGTCCCCAACCAAAACCAGGGTATCCG...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp GTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGTCCTTCTTGGGGCACTaGAGGTCCCGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VPGQVHKQVMGDGVDRVESFLGH*RSRARF
Trigger: GAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGA...CTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR GCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTATGGCCCCGGCCGCACTaGCCTCAGGCTCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLWPRPH*PQAQGP
Trigger: TGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCA...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGGGGTGGAATCCGAGGTaGGCGGCCCACAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEGWNPR*AAHKAG
Trigger: GCCAGCTTTGTGGGCCGCGCACCTCGGATTCCACCC...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTCTCTCCAAGCGAGACTaGGCCTGCGGGGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCLSKRD*ACGVWV
Trigger: GACCCAGACCCCGCAGGCGCAGTCTCGCTTGGAGAG...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTATCAAGGCCCAGGTCCTaGCGCAGGAGGCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLSRPRS*RRRRSS
Trigger: GCTGCTGCGCCTCCTGCGCCAGGACCTGGGCCTTGA...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp AGCAGAGCCACCACCGGACCGAGTGTTGTGATGCACAGATGCTGGGGATGTGTAAGGTGGAGGCAGGGGTaGTGGCCCCGGCCGCACTGC +
Preference number: 4 (lower is better)
Translates to: SRATTGPSVVMHRCWGCVRWRQG*WPRPHC
Trigger: GCAGTGCGGCCGGGGCCACCACCCCTGCCTCCACCT...TACACATCCCCAGCATCTGTGCATCACAACACTCGGTCCGGTGGTGGCTCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TGGAGGCAGGGGTGGTGGCCCCGGCCGCACTGCCCTCAGGCTCAAGGTCCAGGCTACCCTGGTTTTGGTTaGGGACTCACTGTGACTAGG +
Preference number: 4 (lower is better)
Translates to: WRQGWWPRPHCPQAQGPGYPGFG*GLTVTR
Trigger: CCTAGTCACAGTGAGTCCCCAACCAAAACCAGGGTA...GCCTGGACCTTGAGCCTGAGGGCAGTGCGGCCGGGGCCACCACCCCTGCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAAGGCCCAGCTCAGGGTaGAATCCGAGGTGCGCGGCC +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLRPSSG*NPRCAA
Trigger: GGCCGCGCACCTCGGATTCCACCCTGAGCTGGGCCT...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCGACAGCGGGATGCCTaGGAGGTCCACAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDARQRDA*EVHSLP
Trigger: GGGGAGACTGTGGACCTCTCAGGCATCCCGCTGTCG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCATCACTCAGCCCCGTaGAGCTCAGGTCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEHHSAP*SSGPAP
Trigger: CGGTGCTGGACCTGAGCTTCACGGGGCTGAGTGATG...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGAGCTTCTTGGGGCACTaGAGGTCCCGGGCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDESFLGH*RSRARF
Trigger: GAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGCT...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGGGAGTGAGGTGCGCTaGCTCAGCCGCCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLGSEVR*LSRRRR
Trigger: CCTGCGCCGGCGGCTGAGCCAGCGCACCTCACTCCC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp CATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGTGGTGGGTCACCTaGCACAGCAGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HSPSWGTAGPGPGSQAGHGWWVT*HSRPGA
Trigger: AGCCCCAGGCCTGCTGTGCCAGGTGACCCACCACCC...ATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR TCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTTGGGGTCGACCGGGTTaGGGAAGGCCACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCWGRPG*GRPHLC
Trigger: ACAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCA...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp ACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGCCACTGAGGGAAGGCTaGGCCTCTAGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TSRSWEMGSTGLRKATSLPLREG*ASSQGW
Trigger: CCAGCCCTGGCTAGAGGCTCAGCCTTCCCTCAGTGG...CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp CACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGAGCCAGGTGGGTGGTaGGTCACCTGGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: HKQVMGDGVDRVEEGHISEPGGW*VTWHSR
Trigger: CCTGCTGTGCCAGGTGACCCACCACCCACCTGGCTC...AGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTTCTCTCAGTCCTAACTaGGCTCCGGCAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCSLSPN*APAEAQ
Trigger: CTGGGCCTCTGCCGGAGCCCAGTTAGGACTGAGAGA...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CAA 72 bp GGGAACTTGGTGGTGTCCTTGATGGCATCAGTGAGCTaGCGGGCAGTGGCCCGCGTCAGTCGGTTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GNLVVSLMASVS*RAVARVSRLPL
Trigger: CAACGGCAACCGACTGACGCGGGCCACTGCCCGCAAGCTCACTGATGCCATCAAGGACACCACCAAGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTaGGAGGTCCACAGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCRQRDA*EVHSLP
Trigger: GGGGAGACTGTGGACCTCTCAGGCATCCCGCTGTCG...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCGTTGGGGACTCACTGTaGCTAGGAGTCTGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAVGDSL*LGVWVR
Trigger: CCGGACCCAGACTCCTAGTCACAGTGAGTCCCCAAC...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTACTGGGCAGCAGGAGGTaGAGCAGCTCATCACTCAGC +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLLGSRR*SSSSLS
Trigger: GCTGAGTGATGAGCTGCTGCACCTCCTGCTGCCCAG...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTTCGCGGAGCGTGGACTaGATCTCGCGGAGCCACCGC +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLSRSVD*ISRSHR
Trigger: GCGGTGGCTCCGCGAGATCCAGTCCACGCTCCGCGA...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCGCCGCTCGCGGAGCGTaGACTGGATCTCGCGGAGCC +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVAARGA*TGSRGA
Trigger: GGCTCCGCGAGATCCAGTCCACGCTCCGCGAGCGGC...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGGGTGGTGGGTCACCTaGCACAGCAGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLGWWVT*HSRPGA
Trigger: AGCCCCAGGCCTGCTGTGCCAGGTGACCCACCACCC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCAATGAGCCAGGTGGGTaGTGGGTCACCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDANEPGG*WVTWHS
Trigger: GCTGTGCCAGGTGACCCACCACCCACCTGGCTCATT...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp CTTCCAGAGCTCATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACCCAGGGCTGGCCACCTaGCCACCTATGAGTCCATTC +
Preference number: 4 (lower is better)
Translates to: LPELIVLLGALQVPGQVHPGLAT*PPMSPF
Trigger: GAATGGACTCATAGGTGGCCAGGTGGCCAGCCCTGG...GTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATGAGCTCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTGTCAGCATGGGGTTCTaGGCAGCTTCTTGGGGCACT +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCVSMGF*AASWGT
Trigger: AGTGCCCCAAGAAGCTGCCCAGAACCCCATGCTGAC...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTCTGGGTCCGGTGGCTaGTCACAGCCACACATCCTG +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDASGSGG*SQPHIL
Trigger: CAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTACTGGGCATTCAGAGCTaGCAGGGCCCAGAGCGGATA +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLLGIQS*QGPERI
Trigger: TATCCGCTCTGGGCCCTGCCAGCTCTGAATGCCCAG...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
3UTR CAA 72 bp TCCACCCAAGCCAAAGCAGGGAACTTGGTGGTGTCCTaGATGGCATCAGTGAGCTTGCGGGCAGTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: STQAKAGNLVVS*MASVSLRAVAR
Trigger: GCGGGCCACTGCCCGCAAGCTCACTGATGCCATCAAGGACACCACCAAGTTCCCTGCTTTGGCTTGGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGTGCTCAGGTAGCGTGTaGTGTGTTGCACGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDECSGSV*CVARPV
Trigger: CACAGGACGTGCAACACATCACACGCTACCTGAGCA...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGTCCACAGTCTCCCCTaGCAGCAGAGTCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLVHSLP*QQSLLE
Trigger: CTCCAGAAGACTCTGCTGGCAGGGGAGACTGTGGAC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGTGTCGACAGCGGGATaGCTGAGAGGTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLVSTAG*LRGPQS
Trigger: AGACTGTGGACCTCTCAGGCATCCCGCTGTCGACAC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCAGCACACACAGCAGCTaGAAGCCCTGGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDASTHSS*KPWLFL
Trigger: CAGGAACAGCCAGGGCTTGCAGCTGCTGTGTGTGCT...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTAAGCGAGACTGCGCCTaGGGGGTCTGGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLKRDCA*GVWVWA
Trigger: AGCCCAGACCCAGACCCCGCAGGCGCAGTCTCGCTT...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp ACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGCTCTTGAGGCAGCTCTaGGTCTTCCTCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: TSRSWEMGSTGLRKATSLLLRQL*VFLWRR
Trigger: CCTGCGCCAGAGGAAGACCCAGAGCTGCCTCAAGAG...CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGAGCCAGGTGGGTGGTaGGTCACCTGGCACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLEPGGW*VTWHSR
Trigger: CCTGCTGTGCCAGGTGACCCACCACCCACCTGGCTC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp CTTCCAGAGCTCATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACGCTGCCATGGTGTCTTaGGGTGAGGCTGCATCCCTA +
Preference number: 4 (lower is better)
Translates to: LPELIVLLGALQVPGQVHAAMVS*GEAASL
Trigger: TAGGGATGCAGCCTCACCCCAAGACACCATGGCAGC...GTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATGAGCTCTGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTGTCGATGCTCATaGCAGGACATCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDELCRCS*QDICRC
Trigger: GCACCTGCAGATGTCCTGCCATGAGCATCGACACAG...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTCACAGCCACACATCCTaGGGCTGTGTCGATGCTCAT +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCHSHTS*GCVDAH
Trigger: ATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTG...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTCATCACTCAGCCCCGTaGAGCTCAGGTCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLHHSAP*SSGPAP
Trigger: CGGTGCTGGACCTGAGCTTCACGGGGCTGAGTGATG...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GCGCAGGCTGGACCCTTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGATTTCTGGGGGCCTGTaGGTCCTCCTTGACCTTCAT +
Preference number: 4 (lower is better)
Translates to: AQAGPLLLLRVRGEVVDEISGGL*VLLDLH
Trigger: ATGAAGGTCAAGGAGGACTCACAGGCCCCCAGAAAT...CTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCCACTGAGGGAAGGCTaGGCCTCTAGCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVPLREG*ASSQGW
Trigger: CCAGCCCTGGCTAGAGGCTCAGCCTTCCCTCAGTGG...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp CACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTCCGGACCGAGTGTTGTaGTGCACAGATGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HKQVMGDGVDRVEEGHISPDRVL*CTDAGD
Trigger: ATCCCCAGCATCTGTGCATCACAACACTCGGTCCGG...AGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp CATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATTTCACAAGCAGGTCATaGGAGATGGGGTCGACCGGG +
Preference number: 4 (lower is better)
Translates to: HSPSWGTAGPGPGSQAGHFTSRS*EMGSTG
Trigger: CCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAA...ATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTTCTTGGGGCACTCTGGGTCTTCCTCTaGCGCAGGCTGGACCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSADLVRGLPELIVLLGALWVFL*RRLDPC
Trigger: GCAAGGGTCCAGCCTGCGCCAGAGGAAGACCCAGAG...TGCCCCAAGAAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTAATGAGCCAGGTGGGTaGTGGGTCACCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCNEPGG*WVTWHS
Trigger: GCTGTGCCAGGTGACCCACCACCCACCTGGCTCATT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp CTTCCAGAGCTCATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACCTGGTGATGCATGGATaGCTCTCTGTGGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LPELIVLLGALQVPGQVHLVMHG*LSVGCH
Trigger: ATGGCAGCCCACAGAGAGCCATCCATGCATCACCAG...GTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATGAGCTCTGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTTTCTGGGCAGCTTCTTaGGGCACTGCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLFWAAS*GTAGPG
Trigger: CCCGGGACCTGCAGTGCCCCAAGAAGCTGCCCAGAA...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTTACAGCACCACCACCTaGCTCTCTCTCAGTCCTAAC +
Preference number: 4 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCYSTTT*LSLSPN
Trigger: GTTAGGACTGAGAGAGAGCCAGGTGGTGGTGCTGTA...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTTGGGGTCGACCGGGTTaGGGAAGGCCACATCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLWGRPG*GRPHLC
Trigger: ACAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCA...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCTATCCAGTCCCTCTGTaGGCAGCCCCAGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVYPVPL*AAPGAG
Trigger: GCCTGCTCCTGGGGCTGCTCACAGAGGGACTGGATA...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTCTGGGCAGCAGGAGGTaGAGCAGCTCATCACTCAGC +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLLGSRR*SSSSLS
Trigger: GCTGAGTGATGAGCTGCTGCACCTCCTGCTGCCCAG...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTCCTAGGGGCCGACTGTaGAGAGACCTGGGCATTCAG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLPRGRL*RDLGIQ
Trigger: CTGAATGCCCAGGTCTCTGCACAGTCGGCCCCTAGG...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGTGTCGACAGCGGGATaGCTGAGAGGTCCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLVSTAG*LRGPQS
Trigger: AGACTGTGGACCTCTCAGGCATCCCGCTGTCGACAC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR GCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTTCATGGCAGGACATCTaGAGGTGCTGTCAGCATGGG +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCSWQDI*RCCQHG
Trigger: CCCATGCTGACAGCACCTGCAGATGTCCTGCCATGA...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp CATAGTCCTTCTTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATAGAACTGGTGATGCATaGATGGCTCTCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HSPSWGTAGPGPGSQAGHRTGDA*MALCGL
Trigger: CAGCCCACAGAGAGCCATCCATGCATCACCAGTTCT...ATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAAGAAGGACTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR TCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTATTTCTGGGGGCCTGTaGGTCCTCCTTGACCTTCAT +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCISGGL*VLLDLH
Trigger: ATGAAGGTCAAGGAGGACTCACAGGCCCCCAGAAAT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCATGGTGTCTTGGGGTaGGGCTGCATCCCTAGACCA +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVHGVLG*GCIPRP
Trigger: TGGTCTAGGGATGCAGCCTCACCCCAAGACACCATG...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR TCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCCACAAAGCTGGCACTaGGCATGCTCCACTGCATCC +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVPQSWH*ACSTAS
Trigger: GGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGG...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTCAGGACATCTGCAGGTaGTGTCAGCATGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLQDICR*CQHGVL
Trigger: CAGAACCCCATGCTGACAGCACCTGCAGATGTCCTG...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR GCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTGGGGCTGTGTCGATaGTCATGGCAGGACATCTGC +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVLGLCR*SWQDIC
Trigger: GCAGATGTCCTGCCATGAGCATCGACACAGCCCCAG...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCTTCACAAGCAGGTCATaGGAGATGGGGTCGACCGGG +
Preference number: 4 (lower is better)
Translates to: VVDELSADLVRGLPELIVFTSRS*EMGSTG
Trigger: CCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAA...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CCA 90 bp CACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTTTTACACTGGATTTCTaGGGGCCTGTGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HKQVMGDGVDRVEEGHISFTLDF*GPVSPP
Trigger: AGGAGGACTCACAGGCCCCCAGAAATCCAGTGTAAA...AGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTATGGATGGCTCTCTGTaGGCTGCCATGGTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLMDGSL*AAMVSW
Trigger: CCAAGACACCATGGCAGCCCACAGAGAGCCATCCAT...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CCA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTCAGGTGCTGTCAGCATaGGGTTCTGGGCAGCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLLRVRGEVVDELSADLQVLSA*GSGQLL
Trigger: AAGAAGCTGCCCAGAACCCCATGCTGACAGCACCTG...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR TCA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCCCCTTAATCTCAGGCTaGGCATTTACACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAPLISG*AFTLDF
Trigger: GAAATCCAGTGTAAATGCTCAGCCTGAGATTAAGGG...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp ATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGTAGAGGATATCTGTACTCTAAGGGCATaGGCCGCCTGTTGGAGAACT +
Preference number: 4 (lower is better)
Translates to: MGDGVDRVEEGHISVEDICTLRA*AACWRT
Trigger: AGTTCTCCAACAGGCGGCTCATGCCCTTAGAGTACA...GATATCCTCTACAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR GCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCTGAGCATGCTCCACTaGATCCTTTATCCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCLSMLH*ILYPVP
Trigger: AGGGACTGGATAAAGGATGCAGTGGAGCATGCTCAG...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CCA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTTTTACACTGGATTTCTaGGGGCCTGTGAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCFTLDF*GPVSPP
Trigger: AGGAGGACTCACAGGCCCCCAGAAATCCAGTGTAAA...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR TCA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTTCTTGGGGCACCCTTAATCTCAGGCTaGGCATTTACACTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LSADLVRGLPELIVLLGAPLISG*AFTLDF
Trigger: GAAATCCAGTGTAAATGCTCAGCCTGAGATTAAGGG...TGCCCCAAGAAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS CCA 90 bp GGCGCAGCAGCTGCCGGGCGCGCTCCGGCCGCCGCTCGCGGAGCGTaGACTGGATCTCGCGGAGCCACCGCACCCGGCGCTCGTAGGGCG +
Preference number: 5 (lower is better)
Translates to: GAAAAGRAPAAARGA*TGSRGATAPGARRA
Trigger: CGCCCTACGAGCGCCGGGTGCGGTGGCTCCGCGAGATCCAGTCCACGCTCCGCGAGCGGCGGCCGGAGCGCGCCCGGCAGCTGCTGCGCC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318753.13
ENST00000404045.6
ENST00000446942.5
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
CDS GCA 90 bp CCCTCACTCCAGGCGGTCGCCCTCTCGCCCACGCAAGACCCCGCGTaGTGCAGCCTGTCGCGCCCTCGGAACCCGCCTGCGCGCGCCAGA +
Preference number: 5 (lower is better)
Translates to: PSLQAVALSPTQDPA*CSLSRPRNPPARAR
Trigger: TCTGGCGCGCGCAGGCGGGTTCCGAGGGCGCGACAGGCTGCAGCACGCGGGGTCTTGCGTGGGCGAGAGGGCGACCGCCTGGAGTGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS GCA 90 bp GCAAGACCCCGCGTGCTGCAGCCTGTCGCGCCCTCGGAACCCGCCTaGGCGCGCCAGAGACCAGCTCCGCCTCGCCTCCCGGCGGATACA +
Preference number: 5 (lower is better)
Translates to: ARPRVLQPVAPSEPA*ARQRPAPPRLPADT
Trigger: TGTATCCGCCGGGAGGCGAGGCGGAGCTGGTCTCTGGCGCGCGCAGGCGGGTTCCGAGGGCGCGACAGGCTGCAGCACGCGGGGTCTTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS GCA 90 bp TCACTCCAGGCGGTCGCCCTCTCGCCCACGCAAGACCCCGCGTGCTaGAGCCTGTCGCGCCCTCGGAACCCGCCTGCGCGCGCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SLQAVALSPTQDPAC*SLSRPRNPPARARD
Trigger: GTCTCTGGCGCGCGCAGGCGGGTTCCGAGGGCGCGACAGGCTGCAGCACGCGGGGTCTTGCGTGGGCGAGAGGGCGACCGCCTGGAGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS CCA 90 bp CCAACCCGGCTGTGGCCTGGCACAGAGCCAGGGGAGGCTGCCCTCTaGGAGCTGGACAGGCTGGTCCAGTCCCGCAGTGCCCGGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PTRLWPGTEPGEAAL*ELDRLVQSRSARRE
Trigger: CTCCCGCCGGGCACTGCGGGACTGGACCAGCCTGTCCAGCTCCCAGAGGGCAGCCTCCCCTGGCTCTGTGCCAGGCCACAGCCGGGTTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS GCA 90 bp CCCTGTCCTCGGGCCCAGGGCCAGCGTCTCGGGCTATCAGCCGGCTaGCTGCCCACCCTCAGCACCCTTCGGGGACTTGCCACAGGGGGA +
Preference number: 5 (lower is better)
Translates to: PCPRAQGQRLGLSAG*LPTLSTLRGLATGG
Trigger: TCCCCCTGTGGCAAGTCCCCGAAGGGTGCTGAGGGTGGGCAGGCAGCCGGCTGATAGCCCGAGACGCTGGCCCTGGGCCCGAGGACAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS TCA 90 bp GGCTGGTCCAGTCCCGCAGTGCCCGGCGGGAGGAAGCCCAGACAATaGGCCCTTGTTCCCTGTCCTCGGGCCCAGGGCCAGCGTCTCGGG +
Preference number: 5 (lower is better)
Translates to: GWSSPAVPGGRKPRQ*ALVPCPRAQGQRLG
Trigger: CCCGAGACGCTGGCCCTGGGCCCGAGGACAGGGAACAAGGGCTCATTGTCTGGGCTTCCTCCCGCCGGGCACTGCGGGACTGGACCAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS GCA 90 bp GGAGGCTGCCCTCTGGGAGCTGGACAGGCTGGTCCAGTCCCGCAGTaGCCGGCGGGAGGAAGCCCAGACAATGAGCCCTTGTTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GGCPLGAGQAGPVPQ*PAGGSPDNEPLFPV
Trigger: GACAGGGAACAAGGGCTCATTGTCTGGGCTTCCTCCCGCCGGGCACTGCGGGACTGGACCAGCCTGTCCAGCTCCCAGAGGGCAGCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS CCA 90 bp GCTGCCATGGTGTCTTGGGGTGAGGCTGCATCCCTAGACCAGCCCTaGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATCCCCGCGCCG +
Preference number: 5 (lower is better)
Translates to: AAMVSWGEAASLDQP*VLSPGSTVSRIPAP
Trigger: CGGCGCGGGGATCCGGGAGACAGTGGACCCTGGAGAGAGGACCCAGGGCTGGTCTAGGGATGCAGCCTCACCCCAAGACACCATGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464490.1
CDS GCA 90 bp GCAGTGAGCACCCGTCCGCAAGGGTGTCTGTACAGGATGGAGACCTaGGGACAGACGGGGGCTCTAGCCGAGAGCGGCTCTCTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: AVSTRPQGCLYRMET*GQTGALAESGSLLA
Trigger: GGCCAGAAGAGAGCCGCTCTCGGCTAGAGCCCCCGTCTGTCCGCAGGTCTCCATCCTGTACAGACACCCTTGCGGACGGGTGCTCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465334.1
CDS CCA 90 bp GCTGCCATGGTGTCTTGGGGTGAGGCTGCATCCCTAGACCAGCCCTaGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATCCTGGCGCAG +
Preference number: 5 (lower is better)
Translates to: AAMVSWGEAASLDQP*VLSPGSTVSRILAQ
Trigger: CTGCGCCAGGATCCGGGAGACAGTGGACCCTGGAGAGAGGACCCAGGGCTGGTCTAGGGATGCAGCCTCACCCCAAGACACCATGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS CCA 90 bp GCTGCCATGGTGTCTTGGGGTGAGGCTGCATCCCTAGACCAGCCCTaGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATCCTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: AAMVSWGEAASLDQP*VLSPGSTVSRILEE
Trigger: CTCCTCCAGGATCCGGGAGACAGTGGACCCTGGAGAGAGGACCCAGGGCTGGTCTAGGGATGCAGCCTCACCCCAAGACACCATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS-3UTR CAA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGCCCGCGTCAGTCGGTaGCCGTTGAGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLARVSR*PLSRSW
Trigger: CCAGCTCCTGCTCAACGGCAACCGACTGACGCGGGC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CAA 90 bp CACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGCCCGCGTCAGTCGGTaGCCGTTGAGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HKQVMGDGVDRVEEGHISARVSR*PLSRSW
Trigger: CCAGCTCCTGCTCAACGGCAACCGACTGACGCGGGC...AGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CAA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCATGGCATCAGTGAGCTaGCGGGCAGTGGCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAMASVS*RAVARV
Trigger: GACGCGGGCCACTGCCCGCAAGCTCACTGATGCCAT...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS GCA 90 bp GGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTGTCGATaGTCATGGCAGGACATCTGCAGGTGCTGTCAGCATGGGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSGGWSQPHILGLCR*SWQDICRCCQHGVL
Trigger: CAGAACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446942.5
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
ENST00000495297.5
CDS CCA 90 bp GGTGGCTGGTCACAGCCACACATCCTGGGGCTGTGTCGATGCTCATaGCAGGACATCTGCAGGTGCTGTCAGCATGGGGTTCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GGWSQPHILGLCRCS*QDICRCCQHGVLGS
Trigger: GCTGCCCAGAACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTGACCAGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446942.5
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
ENST00000495297.5
CDS-3UTR CAA 90 bp GTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGAGCTGTCGGCAGATCTaGTCCGAGGACTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VPGQVHKQVMGDGVDRVESCRQI*SEDFQS
Trigger: GCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCT...CTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CAA 90 bp ACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGAAGGCCACATCTCTGGCGCAGGCTGGACCCTaGCTGCTGCTTCGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TSRSWEMGSTGLRKATSLAQAGP*LLLRVR
Trigger: CCTCACTCGAAGCAGCAGCAAGGGTCCAGCCTGCGC...CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS CCA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTaGGGCTGTGTCGATGCTCATGGCAGGACATCTGCAGGTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VTRSLGPVAGHSHTS*GCVDAHGRTSAGAV
Trigger: GACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000446942.5
ENST00000460524.5
ENST00000491910.5
ENST00000495297.5
CDS CCA 90 bp GCTGTGTCGATGCTCATGGCAGGACATCTGCAGGTGCTGTCAGCATaGGGTTCTGGGCAGCTGTGGGGTGGAGGCTGCAGGTGGCAAACT +
Preference number: 5 (lower is better)
Translates to: AVSMLMAGHLQVLSA*GSGQLWGGGCRWQT
Trigger: AGTTTGCCACCTGCAGCCTCCACCCCACAGCTGCCCAGAACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
CDS-3UTR CAA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCATGGGGTCGACCGGGTaGAGGAAGGCCACATCTCTG +
Preference number: 5 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAMGSTG*RKATSL
Trigger: CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCAT...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp GTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGTAGCGTGTGATGTGTaGCACGTCCTGTGTCGACAG +
Preference number: 5 (lower is better)
Translates to: VPGQVHKQVMGDGVDRVEVACDV*HVLCRQ
Trigger: CTGTCGACACAGGACGTGCAACACATCACACGCTAC...CTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CAA 90 bp GTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGTCGACCGGGTTGAGGCCAAAGCAGGGAACTaGGTGGTGTCCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: VPGQVHKQVMGDGVDRVEAKAGN*VVSLMA
Trigger: TGCCATCAAGGACACCACCAAGTTCCCTGCTTTGGC...CTCAACCCGGTCGACCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS TCA 90 bp GAGGAGGGCCTTGCTTATGACCCCAGCTGTTGTAGGGGAAAGCAGTaGGCACCCGTCCGCAAGGGTGTCTGTACAGGATGGAGACCTGCG +
Preference number: 5 (lower is better)
Translates to: EEGLAYDPSCCRGKQ*APVRKGVCTGWRPA
Trigger: CGCAGGTCTCCATCCTGTACAGACACCCTTGCGGACGGGTGCTCACTGCTTTCCCCTACAACAGCTGGGGTCATAAGCAAGGCCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465334.1
CDS-3UTR CAA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCTTCTGGAGGCTGCTCTaGAGGCAGCTCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAFWRLL*RQLWVF
Trigger: GAAGACCCAGAGCTGCCTCAAGAGCAGCCTCCAGAA...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTGTCAGTCGGTTGCCGTaGAGCAGGAGCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCVSRLP*SRSWVR
Trigger: CCTCACCCAGCTCCTGCTCAACGGCAACCGACTGAC...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTTCTTGGGGCAATGGCATCAGTGAGCTaGCGGGCAGTGGCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: LSADLVRGLPELIVLLGAMASVS*RAVARV
Trigger: GACGCGGGCCACTGCCCGCAAGCTCACTGATGCCAT...TGCCCCAAGAAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CAA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGTTCTGGGCAGCTTCTaGGGGCACTGCAGGTCCCGG +
Preference number: 5 (lower is better)
Translates to: LLLLRVRGEVVDELSADLVLGSF*GHCRSR
Trigger: CCGGGACCTGCAGTGCCCCAAGAAGCTGCCCAGAAC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS CCA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTGTaGGAGGGCAGTGTCACCATGGTGAATCTGAGCCCCTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LSADLVRGLPELIVL*EGSVTMVNLSPSCP
Trigger: TGGGCAGGAGGGGCTCAGATTCACCATGGTGACACTGCCCTCCCACAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS-3UTR CAA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTATGGGGTCGACCGGGTaGAGGAAGGCCACATCTCTG +
Preference number: 5 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCMGSTG*RKATSL
Trigger: CAGAGATGTGGCCTTCCTCAACCCGGTCGACCCCAT...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp CCGAGGTGCGCGGCCCACAAAGCTGGCACTGAGCATGCTCCACTGCATCCTTTAGTAGCGTGTGATGTGTaGCACGTCCTGTGTCGACAG +
Preference number: 5 (lower is better)
Translates to: PRCAAHKAGTEHAPLHPLVACDV*HVLCRQ
Trigger: CTGTCGACACAGGACGTGCAACACATCACACGCTAC...TAAAGGATGCAGTGGAGCATGCTCAGTGCCAGCTTTGTGGGCCGCGCACCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CAA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTGTCAGTCGGTTGCCGTaGAGCAGGAGCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LLLLRVRGEVVDELSADLVSRLP*SRSWVR
Trigger: CCTCACCCAGCTCCTGCTCAACGGCAACCGACTGAC...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp TTGGGGCACTGCAGGTCCCGGGCCAGGTTCACAAGCAGGTCATGGGAGATGGGGAACTTGGTGGTGTCCTaGATGGCATCAGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LGHCRSRARFTSRSWEMGNLVVS*MASVSL
Trigger: CAAGCTCACTGATGCCATCAAGGACACCACCAAGTT...CCCCATCTCCCATGACCTGCTTGTGAACCTGGCCCGGGACCTGCAGTGCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS-3UTR CAA 90 bp GCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTCGACAGCGGGATGCCGCCAAAGCAGGGAACTaGGTGGTGTCCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: AAQVACDVLHVLCRQRDAAKAGN*VVSLMA
Trigger: TGCCATCAAGGACACCACCAAGTTCCCTGCTTTGGC...GGCATCCCGCTGTCGACACAGGACGTGCAACACATCACACGCTACCTGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp CTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTTCTTGGGGCAGCCACATCCACGTTGTaGCCCAGGTCCACCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LSADLVRGLPELIVLLGAATSTL*PRSTQA
Trigger: GGCTTGGGTGGACCTGGGCAACAACGTGGATGTGGC...TGCCCCAAGAAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404045.6
CDS TCA 90 bp GAGGAGGGCCTTGCTTATGACCCCAGCTGTTGTAGGGGAAAGCAGTaGGCACCCGTCCGCAAGGGTGTCTGTACAGGATGGAGACCTTCT +
Preference number: 5 (lower is better)
Translates to: EEGLAYDPSCCRGKQ*APVRKGVCTGWRPS
Trigger: AGAAGGTCTCCATCCTGTACAGACACCCTTGCGGACGGGTGCTCACTGCTTTCCCCTACAACAGCTGGGGTCATAAGCAAGGCCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS TCA 90 bp TGGTGCACAGTGCTGCCACACAGAAAATGGGTCTGCCCAGGACTCTaGGGGTCCTGCAAAGCACAGCTCACACTTGCTCTAGCTGGTGGC +
Preference number: 5 (lower is better)
Translates to: WCTVLPHRKWVCPGL*GSCKAQLTLALAGG
Trigger: GCCACCAGCTAGAGCAAGTGTGAGCTGTGCTTTGCAGGACCCTCAGAGTCCTGGGCAGACCCATTTTCTGTGTGGCAGCACTGTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465334.1
CDS CCA 90 bp ACCAGCCCTGGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATCCTaGAGGAGGGGGAAGTTACCCTCTTCCATTGTCTCTCAATACAAG +
Preference number: 5 (lower is better)
Translates to: TSPGSSLQGPLSPGS*RRGKLPSSIVSQYK
Trigger: CTTGTATTGAGAGACAATGGAAGAGGGTAACTTCCCCCTCCTCCAGGATCCGGGAGACAGTGGACCCTGGAGAGAGGACCCAGGGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS-3UTR CAA 90 bp CAGCACAGCACCATGGCTGCTCAGGTAGCGTGTGATGTGTTGCACGTCCTGTGTTTCTGGAGGCTGCTCTaGAGGCAGCTCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QHSTMAAQVACDVLHVLCFWRLL*RQLWVF
Trigger: GAAGACCCAGAGCTGCCTCAAGAGCAGCCTCCAGAA...ACACAGGACGTGCAACACATCACACGCTACCTGAGCAGCCATGGTGCTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp GTGACTAGGAGTCTGGGTCCGGTGGCTGGTCACAGCCACACATCCTGGGGCTGTAACTTGGTGGTGTCCTaGATGGCATCAGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: VTRSLGPVAGHSHTSWGCNLVVS*MASVSL
Trigger: CAAGCTCACTGATGCCATCAAGGACACCACCAAGTT...ACAGCCCCAGGATGTGTGGCTGTGACCAGCCACCGGACCCAGACTCCTAGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446942.5
CDS-3UTR CAA 90 bp GTGGTAGATGAGCTGTCGGCAGATCTTGTCCGAGGACTTCCAGAGCTCATAGTCGCCACATCCACGTTGTaGCCCAGGTCCACCCAAGCC +
Preference number: 5 (lower is better)
Translates to: VVDELSADLVRGLPELIVATSTL*PRSTQA
Trigger: GGCTTGGGTGGACCTGGGCAACAACGTGGATGTGGC...GACTATGAGCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCTCATCTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS-3UTR CAA 90 bp TTGCTGCTGCTTCGAGTGAGGGGTGAGGTGGTAGATGAGCTGTCGGCAGATCTTAGCTGTCGGCAGATCTaGTCCGAGGACTTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLLLRVRGEVVDELSADLSCRQI*SEDFQS
Trigger: GCTCTGGAAGTCCTCGGACAAGATCTGCCGACAGCT...AAGATCTGCCGACAGCTCATCTACCACCTCACCCCTCACTCGAAGCAGCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000404045.6
ENST00000446942.5
CDS TCA 90 bp GGAGGAGGGGGAAGTTACCCTCTTCCATTGTCTCTCAATACAAGATaGTTTGACCTCACTTGCCACTCCTCCCGGGCCCCTCCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GGGGSYPLPLSLNTR*FDLTCHSSRAPPIL
Trigger: CAAGATGGGAGGGGCCCGGGAGGAGTGGCAAGTGAGGTCAAATCATCTTGTATTGAGAGACAATGGAAGAGGGTAACTTCCCCCTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS TCA 90 bp AGGCTAGGAGTTTGTTTCCGTTGGTGGATTTCTCAGAACAGTCTGTaGCCCGCAGGGTCCCCATATGACTTCTGCCCAGCTATAGTCTTC +
Preference number: 5 (lower is better)
Translates to: RLGVCFRWWISQNSL*PAGSPYDFCPAIVF
Trigger: GAAGACTATAGCTGGGCAGAAGTCATATGGGGACCCTGCGGGTCACAGACTGTTCTGAGAAATCCACCAACGGAAACAAACTCCTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464490.1
ENST00000465334.1
CDS GCA 72 bp CGCGTGCTGCAGCCTGTCGCGCCCTCGGAACCCGCCTaGGCGCGCCAGAGACCAGCTCCGCCTCGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: RVLQPVAPSEPA*ARQRPAPPRLP
Trigger: CGGGAGGCGAGGCGGAGCTGGTCTCTGGCGCGCGCAGGCGGGTTCCGAGGGCGCGACAGGCTGCAGCACGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS GCA 72 bp CGGGCCCAGGGCCAGCGTCTCGGGCTATCAGCCGGCTaGCTGCCCACCCTCAGCACCCTTCGGGGACTTGCC +
Preference number: 6 (lower is better)
Translates to: RAQGQRLGLSAG*LPTLSTLRGLA
Trigger: GGCAAGTCCCCGAAGGGTGCTGAGGGTGGGCAGGCAGCCGGCTGATAGCCCGAGACGCTGGCCCTGGGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS CCA 72 bp CTGTGGCCTGGCACAGAGCCAGGGGAGGCTGCCCTCTaGGAGCTGGACAGGCTGGTCCAGTCCCGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LWPGTEPGEAAL*ELDRLVQSRSA
Trigger: GGCACTGCGGGACTGGACCAGCCTGTCCAGCTCCCAGAGGGCAGCCTCCCCTGGCTCTGTGCCAGGCCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS CAA 90 bp CCAGTCCCGCAGTGCCCGGCGGGAGGAAGCCCAGACAATGAGCCCTaGTTCCCTGTCCTCGGGCCCAGGGCCAGCGTCTCGGGCTATCAG +
Preference number: 6 (lower is better)
Translates to: PVPQCPAGGSPDNEP*FPVLGPRASVSGYQ
Trigger: CTGATAGCCCGAGACGCTGGCCCTGGGCCCGAGGACAGGGAACAAGGGCTCATTGTCTGGGCTTCCTCCCGCCGGGCACTGCGGGACTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS TCA 72 bp AGTCCCGCAGTGCCCGGCGGGAGGAAGCCCAGACAATaGGCCCTTGTTCCCTGTCCTCGGGCCCAGGGCCAG +
Preference number: 6 (lower is better)
Translates to: SPAVPGGRKPRQ*ALVPCPRAQGQ
Trigger: CTGGCCCTGGGCCCGAGGACAGGGAACAAGGGCTCATTGTCTGGGCTTCCTCCCGCCGGGCACTGCGGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS GCA 72 bp CCTCTGGGAGCTGGACAGGCTGGTCCAGTCCCGCAGTaGCCGGCGGGAGGAAGCCCAGACAATGAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: PLGAGQAGPVPQ*PAGGSPDNEPL
Trigger: CAAGGGCTCATTGTCTGGGCTTCCTCCCGCCGGGCACTGCGGGACTGGACCAGCCTGTCCAGCTCCCAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS GCA 72 bp ACCCGTCCGCAAGGGTGTCTGTACAGGATGGAGACCTaGGGACAGACGGGGGCTCTAGCCGAGAGCGGCTCT +
Preference number: 6 (lower is better)
Translates to: TRPQGCLYRMET*GQTGALAESGS
Trigger: AGAGCCGCTCTCGGCTAGAGCCCCCGTCTGTCCGCAGGTCTCCATCCTGTACAGACACCCTTGCGGACGGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465334.1
CDS CCA 72 bp GTGTCTTGGGGTGAGGCTGCATCCCTAGACCAGCCCTaGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATC +
Preference number: 6 (lower is better)
Translates to: VSWGEAASLDQP*VLSPGSTVSRI
Trigger: GATCCGGGAGACAGTGGACCCTGGAGAGAGGACCCAGGGCTGGTCTAGGGATGCAGCCTCACCCCAAGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404045.6
ENST00000464490.1
ENST00000491910.5
CDS CCA 72 bp CCCAGCTATAGTCTTCCTGGTCTGGGCCCCCAGGCCTaGTGCACAGTGCTGCCACACAGAAAATGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PSYSLPGLGPQA*CTVLPHRKWVC
Trigger: GCAGACCCATTTTCTGTGTGGCAGCACTGTGCACCAGGCCTGGGGGCCCAGACCAGGAAGACTATAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464490.1
ENST00000465334.1
CDS GCA 72 bp ATCCTGGGGCTGTGTCGATGCTCATGGCAGGACATCTaGAGGTGCTGTCAGCATGGGGTTCTGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: ILGLCRCSWQDI*RCCQHGVLGSF
Trigger: GAAGCTGCCCAGAACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000446942.5
ENST00000495297.5
CDS GCA 72 bp ATCCTGGGGCTGTGTCGATGCTCATGGCAGGACATCTaGAGGTGCTGTCAGCATGGGGTTCTGGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: ILGLCRCSWQDI*RCCQHGVLGSC
Trigger: ACAGCTGCCCAGAACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
CDS CCA 72 bp GGGTCCTCTCTCCAGGGTCCACTGTCTCCCGGATCCTaGAGGAGGGGGAAGTTACCCTCTTCCATTGTCTCT +
Preference number: 6 (lower is better)
Translates to: GSSLQGPLSPGS*RRGKLPSSIVS
Trigger: AGAGACAATGGAAGAGGGTAACTTCCCCCTCCTCCAGGATCCGGGAGACAGTGGACCCTGGAGAGAGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491910.5
CDS CCA 72 bp TCACAGCCACACATCCTGGGGCTGTGTCGATGCTCATaGCAGGACATCTGCAGGTGCTGTCAGCATGGGGTT +
Preference number: 6 (lower is better)
Translates to: SQPHILGLCRCS*QDICRCCQHGV
Trigger: AACCCCATGCTGACAGCACCTGCAGATGTCCTGCCATGAGCATCGACACAGCCCCAGGATGTGTGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000446942.5
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
ENST00000495297.5
CDS TCA 72 bp CTTGCTTATGACCCCAGCTGTTGTAGGGGAAAGCAGTaGGCACCCGTCCGCAAGGGTGTCTGTACAGGATGG +
Preference number: 6 (lower is better)
Translates to: LAYDPSCCRGKQ*APVRKGVCTGW
Trigger: CCATCCTGTACAGACACCCTTGCGGACGGGTGCTCACTGCTTTCCCCTACAACAGCTGGGGTCATAAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460524.5
ENST00000465334.1
ENST00000491910.5
CDS CCA 72 bp GATCTTGTCCGAGGACTTCCAGAGCTCATAGTCCTGTaGGAGGGCAGTGTCACCATGGTGAATCTGAGCCCC +
Preference number: 6 (lower is better)
Translates to: DLVRGLPELIVL*EGSVTMVNLSP
Trigger: GGGGCTCAGATTCACCATGGTGACACTGCCCTCCCACAGGACTATGAGCTCTGGAAGTCCTCGGACAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460524.5
ENST00000491910.5
CDS CAA 90 bp CCGAGAGCGGCTCTCTTCTGGCCCAGGAATTCAGAGGCTAGGAGTTaGTTTCCGTTGGTGGATTTCTCAGAACAGTCTGTGACCCGCAGG +
Preference number: 6 (lower is better)
Translates to: PRAALFWPRNSEARS*FPLVDFSEQSVTRR
Trigger: CCTGCGGGTCACAGACTGTTCTGAGAAATCCACCAACGGAAACAAACTCCTAGCCTCTGAATTCCTGGGCCAGAAGAGAGCCGCTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464490.1
ENST00000465334.1
CDS TCA 72 bp GTGCTGCCACACAGAAAATGGGTCTGCCCAGGACTCTaGGGGTCCTGCAAAGCACAGCTCACACTTGCTCTA +
Preference number: 6 (lower is better)
Translates to: VLPHRKWVCPGL*GSCKAQLTLAL
Trigger: TAGAGCAAGTGTGAGCTGTGCTTTGCAGGACCCTCAGAGTCCTGGGCAGACCCATTTTCTGTGTGGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465334.1
CDS CAA 90 bp GCTCTCTTCTGGCCCAGGAATTCAGAGGCTAGGAGTTTGTTTCCGTaGGTGGATTTCTCAGAACAGTCTGTGACCCGCAGGGTCCCCATA +
Preference number: 6 (lower is better)
Translates to: ALFWPRNSEARSLFP*VDFSEQSVTRRVPI
Trigger: TATGGGGACCCTGCGGGTCACAGACTGTTCTGAGAAATCCACCAACGGAAACAAACTCCTAGCCTCTGAATTCCTGGGCCAGAAGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464490.1
ENST00000465334.1
CDS TCA 72 bp GTTTGTTTCCGTTGGTGGATTTCTCAGAACAGTCTGTaGCCCGCAGGGTCCCCATATGACTTCTGCCCAGCT +
Preference number: 6 (lower is better)
Translates to: VCFRWWISQNSL*PAGSPYDFCPA
Trigger: AGCTGGGCAGAAGTCATATGGGGACCCTGCGGGTCACAGACTGTTCTGAGAAATCCACCAACGGAAACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464490.1
ENST00000465334.1
CDS TCA 72 bp TTACCCTCTTCCATTGTCTCTCAATACAAGATGATTTaGCCTCACTTGCCACTCCTCCCGGGCCCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LPSSIVSQYKMI*PHLPLLPGPSH
Trigger: ATGGGAGGGGCCCGGGAGGAGTGGCAAGTGAGGTCAAATCATCTTGTATTGAGAGACAATGGAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491910.5