RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC75A (Homo sapiens)

Ensembl gene IDs: ENSG00000181350

Ensembl transcript IDs: ENST00000409083.7, ENST00000409887.3, ENST00000470794.2

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCTGGGCCCTCACCCAGCTCCAGGATGGTGGGTAGGTGGCCCTaGTTTGGGGAGCGCTTGCGCAGGCTGAGCAGGAAGGGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: LPGPSPSSRMVGRWP*FGERLRRLSRKGWG
Trigger: GCCCCAGCCCTTCCTGCTCAGCCTGCGCAAGCGCTCCCCAAAGCAGGGCCACCTACCCACCATCCTGGAGCTGGGTGAGGGCCCAGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR GCA 90 bp AAGGACTCCCTGGTGAGGCCCTTCACTTCCATGTCACGTCTGAGCTaGAGCTACAGTCTCCTTGCCCTCATGGTGGTCTTCGGCAGGTGC +
Preference number: 1 (lower is better)
Translates to: KDSLVRPFTSMSRLS*SYSLLALMVVFGRC
Trigger: GCACCTGCCGAAGACCACCATGAGGGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAGTGAAGGGCCTCACCAGGGAGTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR GCA 90 bp GCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTaGCTTGCCCATTCTACCCAACAAGGACTCCCTGGTGAGGCCCTT +
Preference number: 1 (lower is better)
Translates to: AISLTHLIGEAPSPA*LAHSTQQGLPGEAL
Trigger: AAGGGCCTCACCAGGGAGTCCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 90 bp ACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGAAGGCCATaGGCTGAGCTGAGAGGGTTCTCTGGGGCCTGGGATGACTTAAGA +
Preference number: 1 (lower is better)
Translates to: TSSHVPISTSLWGRP*AELRGFSGAWDDLR
Trigger: TCTTAAGTCATCCCAGGCCCCAGAGAACCCTCTCAGCTCAGCTCATGGCCTTCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 90 bp TCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTaGCCACAAGGTTCAAGAGTGATTGGCTCCCAGTCTTCCTGGACT +
Preference number: 1 (lower is better)
Translates to: SCLPRPVKRVLPHTV*PQGSRVIGSQSSWT
Trigger: AGTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 90 bp GATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTaGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCAC +
Preference number: 1 (lower is better)
Translates to: DIAIAGPMGRCLESR*ASEIGLGLHKEVGH
Trigger: GTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 90 bp TCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTaGTTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGG +
Preference number: 1 (lower is better)
Translates to: SRGSSPILFAHKVQE*LAPSLPGLNYLDLG
Trigger: CCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 90 bp GCTGCTCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATaGCTAGAATCAAGGTGGGCCTCAGAAATAGGGCTGGGTCTCCAT +
Preference number: 1 (lower is better)
Translates to: AALSKDIAIAGPMGR*LESRWASEIGLGLH
Trigger: ATGGAGACCCAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 90 bp CTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTaGTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTGCAGCATTG +
Preference number: 1 (lower is better)
Translates to: LKAFKASSISAPAAL*SVPWCSFVPAPAAL
Trigger: CAATGCTGCAGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 90 bp CCACATGGCATCGTAGGCTGCTCTGTCAAAGGATATAGCGATAGCTaGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAAT +
Preference number: 1 (lower is better)
Translates to: PHGIVGCSVKGYSDS*SYGQMPRIKVGLRN
Trigger: ATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGAGCAGCCTACGATGCCATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 90 bp CTGAACAGGACTTTATGCCTGTATGCATGGGCACCATGTCTGTCCTaGGCACTACCACATGGCATCGTAGGCTGCTCTGTCAAAGGATAT +
Preference number: 1 (lower is better)
Translates to: LNRTLCLYAWAPCLS*ALPHGIVGCSVKGY
Trigger: ATATCCTTTGACAGAGCAGCCTACGATGCCATGTGGTAGTGCTCAGGACAGACATGGTGCCCATGCATACAGGCATAAAGTCCTGTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 90 bp CCCTACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATaGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAA +
Preference number: 1 (lower is better)
Translates to: PYCILFLGESSWCSQ*LRLTVPPAMCPFPQ
Trigger: TTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 90 bp ATTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTaGCTGTTATTTAGAAGAGATCCCTTAACTGGTAGGGCCCTTTCA +
Preference number: 1 (lower is better)
Translates to: IGSQSSWTELLGSRG*LLFRRDPLTGRALS
Trigger: TGAAAGGGCCCTACCAGTTAAGGGATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 90 bp TGTGGTCAGCCTAAGCTCTTAACCCCCTATTCTACAGCTTTAGACTaGAGGCAAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCC +
Preference number: 1 (lower is better)
Translates to: CGQPKLLTPYSTALD*RQKLKAFKASSISA
Trigger: GGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGCTTAGGCTGACCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 90 bp ACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGTCTTCCTaGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGA +
Preference number: 1 (lower is better)
Translates to: TVCPQGSRVIGSQSS*TELLGSRGCLLFRR
Trigger: TCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCAGGATGGTGGGTAGGTaGCCCTGCTTTGGGGAGCGC +
Preference number: 2 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSRMVGR*PCFGER
Trigger: GCGCTCCCCAAAGCAGGGCCACCTACCCACCATCCT...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR GCA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACGCGCCCTCCCCTGCCTaGCTTGCCCATTCTACCCAA +
Preference number: 2 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNAPSPA*LAHSTQ
Trigger: TTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGC...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGGTGGTCTTCGGCAGGTaGCACAGGGCCCCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VGILPTKACQEGPPPYCLVVFGR*HRAPSR
Trigger: CCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCAC...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGCCTCCAGGGTCCTCCTaGCCTACTGTCCCTTCCCGG +
Preference number: 2 (lower is better)
Translates to: AFKASSISAPAALCSVPWPPGSS*PTVPSR
Trigger: CCGGGAAGGGACAGTAGGCCAGGAGGACCCTGGAGG...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR TCA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGGGCCATGAGCTGAGCTaGGAGGGTTCTCTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQGHELS*EGSLGP
Trigger: AGGCCCCAGAGAACCCTCTCAGCTCAGCTCATGGCC...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAACACCCAGCTCCAGGATaGTGGGTAGGTGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: STPSIDGTGVSGNQELQEHPAPG*WVGGPA
Trigger: AGCAGGGCCACCTACCCACCATCCTGGAGCTGGGTG...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR GCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTGGACCTCCTCCCCACTaGCTGGGCCCTCACCCAGCT +
Preference number: 2 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAGPPPH*LGPHPA
Trigger: AGCTGGGTGAGGGCCCAGGCAGTGGGGAGGAGGTCC...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR TCA 90 bp AAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGGGAAGGCCATGAGCTaGGCTGAGAGGGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: KACQEGPPPYCLPTRFKSGKAMS*AERVLW
Trigger: CCAGAGAACCCTCTCAGCTCAGCTCATGGCCTTCCC...ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTGTGGGTAGGTGGCCCTaGTTTGGGGAGCGCTTGCGC +
Preference number: 2 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAVGRWP*FGERLR
Trigger: GCGCAAGCGCTCCCCAAAGCAGGGCCACCTACCCAC...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CCA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGACCAGCTCCAGGATGGTaGGTAGGTGGCCCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGPAPGW*VGGPAL
Trigger: CAAAGCAGGGCCACCTACCCACCATCCTGGAGCTGG...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR TCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGCCAGGTCAATCCACGTaGCATTGGGGAACTTGCTGG +
Preference number: 2 (lower is better)
Translates to: AFKASSISAPAALCSVPWPGQST*HWGTCW
Trigger: CCAGCAAGTTCCCCAATGTCACGTGGATTGACCTGG...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR TCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGGCACCATGTCTGTCCTaGGCACTACCACATGGCATC +
Preference number: 2 (lower is better)
Translates to: AFKASSISAPAALCSVPWAPCLS*ALPHGI
Trigger: GATGCCATGTGGTAGTGCTCAGGACAGACATGGTGC...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTGCGCCCTCCCCTGCCTaGCTTGCCCATTCTACCCAA +
Preference number: 2 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAAPSPA*LAHSTQ
Trigger: TTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGC...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp GGCCTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTGTCTCCTTGCCCTCATaGTGGTCTTCGGCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: GLSRSVKSYWQVTRRKPGVSLPS*WSSAGA
Trigger: GGCACCTGCCGAAGACCACCATGAGGGCAAGGAGAC...ACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTCTGGGGGAAAGCTCTTaGTGTTCACAATGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPLGESS*CSQWLR
Trigger: CCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAG...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 90 bp ATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTaGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGTCTTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: ILPTKACQEGPPPYC*PTRFKSDWLPVFLD
Trigger: GTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACATCCCCTTCCCCAGATaGTATGGTTTGCCTTTCTGT +
Preference number: 2 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNIPFPR*YGLPFC
Trigger: ACAGAAAGGCAAACCATATCATCTGGGGAAGGGGAT...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GGAGGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGGGCCATGAGCTGAGCTaGGAGGGTTCTCTGGGGCCT +
Preference number: 2 (lower is better)
Translates to: GGYKMRTFAKLGSFGSLQGHELS*EGSLGP
Trigger: AGGCCCCAGAGAACCCTCTCAGCTCAGCTCATGGCC...CTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCCTCCCCTGCCTGCCTTaGCCATTCTACCCAACAAGG +
Preference number: 2 (lower is better)
Translates to: SQWLRLTVPPAMCPFPQVLPCLP*PFYPTR
Trigger: CCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAG...GACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp AGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATGGGATAGGGGGCAGATaGAGAGGACCAACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: SDSWSYGQMPRIKVGLRNGIGGR*RGPTGS
Trigger: ACTTCCCGTTGGTCCTCTGCATCTGCCCCCTATCCC...ATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCGGGATAGGGGGCAGATaGAGAGGACCAACGGGAAGT +
Preference number: 2 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFGIGGR*RGPTGS
Trigger: ACTTCCCGTTGGTCCTCTGCATCTGCCCCCTATCCC...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp AAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGTTGCCTTTCTGTAGGTaGGTGGCCCAGGCCAATTTT +
Preference number: 2 (lower is better)
Translates to: KEVGHVQSTPSIDGTGVSLPFCR*VAQANF
Trigger: AAAATTGGCCTGGGCCACCCACCTACAGAAAGGCAA...CGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTAGTCATACTGGCAAGTaGCAAGAAGGAAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPSHTGK*QEGSQV
Trigger: AACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACT...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp ATTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTAACAAGGACTCCCTGGTaGGGCCCTTCACTTCCATGT +
Preference number: 2 (lower is better)
Translates to: IGSQSSWTELLGSRGCLLTRTPW*GPSLPC
Trigger: ACATGGAAGTGAAGGGCCTCACCAGGGAGTCCTTGT...TAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR TCA 90 bp TCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAGGGAAGGCCATGAGCTaGGCTGAGAGGGTTCTCTGG +
Preference number: 2 (lower is better)
Translates to: SQSSWTELLGSRGCLLFRGKAMS*AERVLW
Trigger: CCAGAGAACCCTCTCAGCTCAGCTCATGGCCTTCCC...TCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCGATTCCCACCTTCCTTaGGTGGGGACACATTCCTCT +
Preference number: 2 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVDSHLP*VGTHSS
Trigger: AGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATC...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GGCCTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTGATTCCCACCTTCCTTaGGTGGGGACACATTCCTCT +
Preference number: 2 (lower is better)
Translates to: GLSRSVKSYWQVTRRKPGDSHLP*VGTHSS
Trigger: AGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATC...ACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTTGGATAGGGGATTTCTaGACAGGACTTTATGCCTGT +
Preference number: 2 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPWIGDF*TGLYAC
Trigger: ACAGGCATAAAGTCCTGTTCAGAAATCCCCTATCCA...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCAGATGATATGGTTTaGCTTTCTGTAGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSPDDMV*LSVGGW
Trigger: CCACCCACCTACAGAAAGGCAAACCATATCATCTGG...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGTTGCCTTTCTGTAGGTaGGTGGCCCAGGCCAATTTT +
Preference number: 2 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLLPFCR*VAQANF
Trigger: AAAATTGGCCTGGGCCACCCACCTACAGAAAGGCAA...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGTGGATAGGGGATTTCTaGACAGGACTTTATGCCTGT +
Preference number: 2 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQWIGDF*TGLYAC
Trigger: ACAGGCATAAAGTCCTGTTCAGAAATCCCCTATCCA...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGCTCCCCTGCCTGCCTTaGCCATTCTACCCAACAAGG +
Preference number: 2 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKLPCLP*PFYPTR
Trigger: CCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAG...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTTTCTGTAGGTGGGTaGCCCAGGCCAATTTTTGGC +
Preference number: 2 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCALSVGG*PRPIFG
Trigger: GCCAAAAATTGGCCTGGGCCACCCACCTACAGAAAG...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTGGGGACACATTCCTCTaGTTGGAGCTTGTTCCCCTA +
Preference number: 2 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAGDTFL*LELVPL
Trigger: TAGGGGAACAAGCTCCAACCAGAGGAATGTGTCCCC...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp ATTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTACCCACCTTCCTTGAGTaGGGACACATTCCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: IGSQSSWTELLGSRGCLLPTFLE*GHIPLV
Trigger: AACCAGAGGAATGTGTCCCCACTCAAGGAAGGTGGG...TAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCTGCCTAGAATCAAGGTaGGCCTCAGAAATAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFCLESR*ASEIGL
Trigger: CAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCA...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 90 bp CATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAATTTaGCTAAAGATTCCCACCTTCCTTGAGTGGGGACACATTCCTCTG +
Preference number: 2 (lower is better)
Translates to: HRWNWGLGQPGVTGI*LKIPTFLEWGHIPL
Trigger: CAGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGTCTTGGTGTTCACAATaGCTCAGGCTTACAGTACCT +
Preference number: 2 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLSWCSQ*LRLTVP
Trigger: AGGTACTGTAAGCCTGAGCCATTGTGAACACCAAGA...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGTCATACTGGCAAGTaGCAAGAAGGAAGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFSHTGK*QEGSQV
Trigger: AACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACT...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTGTACCTCCAGCCATGTaGCCATTTCCACAAGTCTTT +
Preference number: 2 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFVPPAM*PFPQVF
Trigger: AAAGACTTGTGGAAATGGGCACATGGCTGGAGGTAC...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 90 bp AGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCTAAGGACATCAGAGCCCACATAGAA +
Preference number: 2 (lower is better)
Translates to: RSVKSYWQVTRRKPG*SLTLHAKDIRAHIE
Trigger: TTCTATGTGGGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GCTCTTAACCCCCTATTCTACAGCTTTAGACTGAAGGCAAAAGCTCAAAGCATTCTTCCATGTCACGTCTaGGCTGCAGCTACAGTCTCC +
Preference number: 2 (lower is better)
Translates to: ALNPLFYSFRLKAKAQSILPCHV*AAATVS
Trigger: GGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAG...AATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CCA 90 bp GCCTACTGTTGTCAGATATTAGCAGTCCAGATATTCGCTCTAGCTTGTAAACTTTCCTTGCCCTCATGGTaGTCTTCGGCAGGTGCCACA +
Preference number: 2 (lower is better)
Translates to: AYCCQILAVQIFALACKLSLPSW*SSAGAT
Trigger: TGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA...AAGTTTACAAGCTAGAGCGAATATCTGGACTGCTAATATCTGACAACAGTAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CCA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGGGTTCTCTGGGGCCTaGGATGACTTAAGAACCAAA +
Preference number: 2 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKGFSGA*DDLRTK
Trigger: TTTGGTTCTTAAGTCATCCCAGGCCCCAGAGAACCC...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTCCCACCTTCCTTGAGTaGGGACACATTCCTCTGGTT +
Preference number: 2 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFPTFLE*GHIPLV
Trigger: AACCAGAGGAATGTGTCCCCACTCAAGGAAGGTGGG...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCCCCCAGCCATCTTGTTaGATCTGCCAAGGGATTGGA +
Preference number: 2 (lower is better)
Translates to: LPGLNYLDLGVACYLEEIPQPSC*ICQGIG
Trigger: TCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGG...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR TCA 90 bp GCTCTTAACCCCCTATTCTACAGCTTTAGACTGAAGGCAAAAGCTCAAAGCATTCTCTGGGGCCTGGGATaGCTTAAGAACCAAATGGCA +
Preference number: 2 (lower is better)
Translates to: ALNPLFYSFRLKAKAQSILWGLG*LKNQMA
Trigger: TGCCATTTGGTTCTTAAGTCATCCCAGGCCCCAGAG...AATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCCCAGATGATATGGTTTaGCTTTCTGTAGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: QIFALACKLPCGQPKLLTPDDMV*LSVGGW
Trigger: CCACCCACCTACAGAAAGGCAAACCATATCATCTGG...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTGGGTTCTCTGGGGCCTaGGATGACTTAAGAACCAAA +
Preference number: 2 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFGFSGA*DDLRTK
Trigger: TTTGGTTCTTAAGTCATCCCAGGCCCCAGAGAACCC...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCTTTTTCAGCCAGCAGTaGGTAGGGAAGGTGGATAGG +
Preference number: 2 (lower is better)
Translates to: LPGLNYLDLGVACYLEEIFFSQQ*VGKVDR
Trigger: CCTATCCACCTTCCCTACCCACTGCTGGCTGAAAAA...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTCATGGCATCGTAGGCTaGTCTGTCAAAGGATATAGC +
Preference number: 2 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFHGIVG*SVKGYS
Trigger: GCTATATCCTTTGACAGAGCAGCCTACGATGCCATG...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTGACTTTATGCCTGTATaGATGGGCACCATGTCTGTC +
Preference number: 2 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFDFMPV*MGTMSV
Trigger: GACAGACATGGTGCCCATGCATACAGGCATAAAGTC...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTCTGAACAGGACTTTATaGCTGTATGCATGGGCACCA +
Preference number: 2 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFLNRTL*LYAWAP
Trigger: TGGTGCCCATGCATACAGGCATAAAGTCCTGTTCAG...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CCA 90 bp GCCTACTGTTGTCAGATATTAGCAGTCCAGATATTCGCTCTAGCTTGTAAACTTCTGAGCACTACCACATaGCATCGTAGGCTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: AYCCQILAVQIFALACKLLSTTT*HRRLLC
Trigger: ACAGAGCAGCCTACGATGCCATGTGGTAGTGCTCAG...AAGTTTACAAGCTAGAGCGAATATCTGGACTGCTAATATCTGACAACAGTAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 90 bp CCCTTGCCATCATGCCCAACAAGAGGTTCTATACCTTTTAATGAATaGACTTTCATAAATTGGTTATGTTGGTGGGCAAAGTTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: PLPSCPTRGSIPFNE*TFINWLCWWAKFFK
Trigger: CTTAAAGAACTTTGCCCACCAACATAACCAATTTATGAAAGTCAATTCATTAAAAGGTATAGAACCTCTTGTTGGGCATGATGGCAAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCTGCTTTGGGGAGCGCTaGCGCAGGCTGAGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSCFGER*RRLSRK
Trigger: CTTCCTGCTCAGCCTGCGCAAGCGCTCCCCAAAGCA...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR GCA 72 bp CCCTCACCCAGCTCCAGGATGGTGGGTAGGTGGCCCTaGTTTGGGGAGCGCTTGCGCAGGCTGAGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: PSPSSRMVGRWP*FGERLRRLSRK
Trigger: CTTCCTGCTCAGCCTGCGCAAGCGCTCCCCAAAGCAGGGCCACCTACCCACCATCCTGGAGCTGGGTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR GCA 72 bp GGCTGGTCTCAGGCTCCTGGGCTCAGATGGTCCTCCTaGCTCAGCTTCCAAAGGCACAGGCCAAGTTGTAGC +
Preference number: 3 (lower is better)
Translates to: GWSQAPGLRWSS*LSFQRHRPSCS
Trigger: GCTACAACTTGGCCTGTGCCTTTGGAAGCTGAGGCAGGAGGACCATCTGAGCCCAGGAGCCTGAGACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
3UTR GCA 72 bp ATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTaGCTGCCTTGCCCATTCTACCCAACAAGGACTCCC +
Preference number: 3 (lower is better)
Translates to: ILNPPDRRSALP*LPCPFYPTRTP
Trigger: GGGAGTCCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTGCAGCTACAGTCTCCTaGCCCTCATGGTGGTCTTCG +
Preference number: 3 (lower is better)
Translates to: FGNILNPPDRRSALPCLPAATVS*PSWWSS
Trigger: CGAAGACCACCATGAGGGCAAGGAGACTGTAGCTGC...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR GCA 72 bp CTGGTGAGGCCCTTCACTTCCATGTCACGTCTGAGCTaGAGCTACAGTCTCCTTGCCCTCATGGTGGTCTTC +
Preference number: 3 (lower is better)
Translates to: LVRPFTSMSRLS*SYSLLALMVVF
Trigger: GAAGACCACCATGAGGGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAGTGAAGGGCCTCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CAA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCGAGAAGATGTCCACGTaGTTGCCCAGGTCAATCCAC +
Preference number: 3 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSEKMST*LPRSIH
Trigger: GTGGATTGACCTGGGCAACAACGTGGACATCTTCTC...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CAA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGTCAATCCACGTGACATaGGGGAACTTGCTGGGATCC +
Preference number: 3 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQSIHVT*GNLLGS
Trigger: GGATCCCAGCAAGTTCCCCAATGTCACGTGGATTGA...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CAA 90 bp ATTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTACCTCCCCTGCCTGCCTaGCCCATTCTACCCAACAAG +
Preference number: 3 (lower is better)
Translates to: IGSQSSWTELLGSRGCLLPPLPA*PILPNK
Trigger: CTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAGG...TAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACGACACATTCCTCTGGTaGGAGCTTGTTCCCCTAAAT +
Preference number: 3 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNDTFLW*ELVPLN
Trigger: ATTTAGGGGAACAAGCTCCAACCAGAGGAATGTGTC...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAAGGCCCAGGCCAATTTTaGGCAATATCCTTAACCCAC +
Preference number: 3 (lower is better)
Translates to: STPSIDGTGVSGNQELQEGPGQF*AISLTH
Trigger: GTGGGTTAAGGATATTGCCAAAAATTGGCCTGGGCC...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGTCTGGGGGAAAGCTCTaGGTGTTCACAATGGCTCAG +
Preference number: 3 (lower is better)
Translates to: VGILPTKACQEGPPPYCLSGGKL*VFTMAQ
Trigger: CTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGA...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCAAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCT +
Preference number: 3 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPRRKPG*SLTLHA
Trigger: AGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCT...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 72 bp ACTTTATGCCTGTATGCATGGGCACCATGTCTGTCCTaGGCACTACCACATGGCATCGTAGGCTGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: TLCLYAWAPCLS*ALPHGIVGCSV
Trigger: GACAGAGCAGCCTACGATGCCATGTGGTAGTGCTCAGGACAGACATGGTGCCCATGCATACAGGCATAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 72 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTaGCCATTTCCACAAGTCTTTGGGGAAGGCCATGAG +
Preference number: 3 (lower is better)
Translates to: SQWLRLTVPPAM*PFPQVFGEGHE
Trigger: CTCATGGCCTTCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 72 bp TTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTaGTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCT +
Preference number: 3 (lower is better)
Translates to: FKASSISAPAAL*SVPWCSFVPAP
Trigger: AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 72 bp ATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTaGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAG +
Preference number: 3 (lower is better)
Translates to: IAGPMGRCLESR*ASEIGLGLHKE
Trigger: CTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCAAGATGTCCACGTTGTaGCCCAGGTCAATCCACGTG +
Preference number: 3 (lower is better)
Translates to: SQWLRLTVPPAMCPFPQVKMSTL*PRSIHV
Trigger: CACGTGGATTGACCTGGGCAACAACGTGGACATCTT...GACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR-3UTR CAA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCGACACATTCCTCTGGTaGGAGCTTGTTCCCCTAAAT +
Preference number: 3 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSDTFLW*ELVPLN
Trigger: ATTTAGGGGAACAAGCTCCAACCAGAGGAATGTGTC...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCT +
Preference number: 3 (lower is better)
Translates to: VGILPTKACQEGPPPYCLRRKPG*SLTLHA
Trigger: AGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCT...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCGTGACATTGGGGAACTaGCTGGGATCCTTAAGGATG +
Preference number: 3 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFVTLGN*LGSLRM
Trigger: CATCCTTAAGGATCCCAGCAAGTTCCCCAATGTCAC...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR TCA 72 bp TCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTaGTTGGCTCCCAGTCTTCCTGGACTGAACTACTTG +
Preference number: 3 (lower is better)
Translates to: SSPILFAHKVQE*LAPSLPGLNYL
Trigger: CAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 72 bp ATCGTAGGCTGCTCTGTCAAAGGATATAGCGATAGCTaGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: IVGCSVKGYSDS*SYGQMPRIKVG
Trigger: GCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGAGCAGCCTACGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 72 bp CTCCAGTTTGTTTCTCCCTCTCCCCAGCCATCTTGTTaGATCTGCCAAGGGATTGGACTCCTTCATTGTCCT +
Preference number: 3 (lower is better)
Translates to: LQFVSPSPQPSC*ICQGIGLLHCP
Trigger: AGGACAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGAGAAACAAACTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp GGAGGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGAGATTCCCACCTTCCTaGAGTGGGGACACATTCCTC +
Preference number: 3 (lower is better)
Translates to: GGYKMRTFAKLGSFGSLQRFPPS*SGDTFL
Trigger: GAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATCT...CTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 72 bp ATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATaGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCA +
Preference number: 3 (lower is better)
Translates to: ILFLGESSWCSQ*LRLTVPPAMCP
Trigger: TGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CCA 72 bp CCACAAGGTTCAAGAGTGATTGGCTCCCAGTCTTCCTaGACTGAACTACTTGGATCTAGGGGTTGCCTGTTA +
Preference number: 3 (lower is better)
Translates to: PQGSRVIGSQSS*TELLGSRGCLL
Trigger: TAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGGCCCAGGCCAATTTTaGGCAATATCCTTAACCCAC +
Preference number: 3 (lower is better)
Translates to: SKDIAIAGPMGRCLESRWGPGQF*AISLTH
Trigger: GTGGGTTAAGGATATTGCCAAAAATTGGCCTGGGCC...CCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR-3UTR CAA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCGGAGTTACAGGAATTTaGCTAAAGATTCCCACCTTC +
Preference number: 3 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVGVTGI*LKIPTF
Trigger: GAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCC...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 72 bp AAGAACCAAATGGCAGATAATGGGATAGGGGGCAGATaGAGAGGACCAACGGGAAGTTTTAACACAAATCCC +
Preference number: 3 (lower is better)
Translates to: KNQMADNGIGGR*RGPTGSFNTNP
Trigger: GGGATTTGTGTTAAAACTTCCCGTTGGTCCTCTGCATCTGCCCCCTATCCCATTATCTGCCATTTGGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR TCA 72 bp AGTTACAGGAATTTTGCTAAAGATTCCCACCTTCCTTaGGTGGGGACACATTCCTCTGGTTGGAGCTTGTTC +
Preference number: 3 (lower is better)
Translates to: SYRNFAKDSHLP*VGTHSSGWSLF
Trigger: GAACAAGCTCCAACCAGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 72 bp CAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTaGCTGTTATTTAGAAGAGATCCCTTAACTGGTAGG +
Preference number: 3 (lower is better)
Translates to: QSSWTELLGSRG*LLFRRDPLTGR
Trigger: CCTACCAGTTAAGGGATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR GCA 72 bp TTCCAAAGGCACAGGCCAAGTTGTAGCTTTGTCCCTTaGCATCATGCCCAACAAGAGGTTCTATACCTTTTA +
Preference number: 3 (lower is better)
Translates to: FQRHRPSCSFVP*HHAQQEVLYLL
Trigger: TAAAAGGTATAGAACCTCTTGTTGGGCATGATGGCAAGGGACAAAGCTACAACTTGGCCTGTGCCTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
3UTR TCA 72 bp CCTAAGCTCTTAACCCCCTATTCTACAGCTTTAGACTaGAGGCAAAAGCTCAAAGCATTTAAGGCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: PKLLTPYSTALD*RQKLKAFKASS
Trigger: TGAGGAGGCCTTAAATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGCTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp AGTCTCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGAGGTCCTGGCGCAGGTaGTGCAGCAGCGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLLALMVVFGRCHRAPSRRSWRR*CSSVPA
Trigger: GGCGGGGACGCTGCTGCAGCACCTGCGCCAGGACCT...CCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGAGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCGCGCCCTCCCCTGCCTaGCTTGCCCATTCTACCCAA +
Preference number: 4 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSAPSPA*LAHSTQ
Trigger: TTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGC...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCCTCCCCTGCCTGCCTTaGCCATTCTACCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSLPCLP*PFYPTR
Trigger: CCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAG...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACTTCACCAGCCCCCGGTaGCGCCTCCACTGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNFTSPR*RLHWEW
Trigger: CCACTCCCAGTGGAGGCGGCACCGGGGGCTGGTGAA...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCAAGGTCCTGGCGCAGGTaGTGCAGCAGCGTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPRSWRR*CSSVPA
Trigger: GGCGGGGACGCTGCTGCAGCACCTGCGCCAGGACCT...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTCCGCCAGGCTGCCCTTaGTCTGCCGGGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPPPGCP*SAGCPC
Trigger: GCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGG...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCCCGCCAGGCTGCCCTTaGTCTGCCGGGTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSPPGCP*SAGCPC
Trigger: GCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGG...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTCCTCCCGCCGGCCCTaGCGCACCATCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFKASSISAPAALCSVPWSSRRP*RTIRSS
Trigger: GCTGCTGCGGATGGTGCGCCAGGGCCGGCGGGAGGA...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCATGTCACGTCTGAGCTaGAGCTACAGTCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSMSRLS*SYSLLA
Trigger: GGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACAT...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCGTGGGTAGGTGGCCCTaGTTTGGGGAGCGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSVGRWP*FGERLR
Trigger: GCGCAAGCGCTCCCCAAAGCAGGGCCACCTACCCAC...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTCTCTCTCCGCCAGGCTaGCCTTGGTCTGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: FGNILNPPDRRSALPCLPLSPPG*PWSAGC
Trigger: GCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAG...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCGGTGCCGCCTCCACTaGGAGTGGGGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGILPTKACQEGPPPYCLRCRLH*EWGLRW
Trigger: CCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCG...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp AAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGCCCGGGCTGCAACTTTaGGGGAACTGTTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: KEVGHVQSTPSIDGTGVSPGLQL*GNCCAR
Trigger: CCGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGG...CGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTTCCATGCCCAGGTCCTaGCGCAGGTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPSMPRS*RRCCSS
Trigger: GCTGCTGCAGCACCTGCGCCAGGACCTGGGCATGGA...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCATCCATGCCCAGGTCCTaGCGCAGGTGCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPSMPRS*RRCCSS
Trigger: GCTGCTGCAGCACCTGCGCCAGGACCTGGGCATGGA...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp AAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCCATGAGCTGAGCTaGGAGGGTTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: KEVGHVQSTPSIDGTGVSGHELS*EGSLGP
Trigger: AGGCCCCAGAGAACCCTCTCAGCTCAGCTCATGGCC...CGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp AAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTCGGCCAGGACAGCCTTaGGGCAGGCCTGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KACQEGPPPYCLPTRFKSRPGQP*GRPVAS
Trigger: GGAAGCCACAGGCCTGCCTCAAGGCTGTCCTGGCCG...ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR GCA 90 bp AAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGTGGTCTTCGGCAGGTaGCACAGGGCCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KACQEGPPPYCLPTRFKSVVFGR*HRAPSR
Trigger: CCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCAC...ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGCCTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTAGGCTGCCCTTGGTCTaGCGGGTGCCCATGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GLSRSVKSYWQVTRRKPGRLPLV*RVPMPP
Trigger: CGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCT...ACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCTCCAGGGTCCTCCTaGCCTACTGTCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSPPGSS*PTVPSR
Trigger: CCGGGAAGGGACAGTAGGCCAGGAGGACCCTGGAGG...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGACCTCCTCCCCACTaGCTGGGCCCTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIGPPPH*LGPHPA
Trigger: AGCTGGGTGAGGGCCCAGGCAGTGGGGAGGAGGTCC...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGCAGCTCCTGGACCATaGCGACTCGCCGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLAAPGP*RLAGGR
Trigger: CCTACCACCGGCGAGTCGGCATGGTCCAGGAGCTGC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGAGCGAGGTCGACTCCATaGCCAGGTCCTGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGARSTP*PGPGAG
Trigger: ACCTGCGCCAGGACCTGGGCATGGAGTCGACCTCGC...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCATCGCCTTCCGGCTTaGGACAGTGGATGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNHRLPA*DSGCSV
Trigger: CACGCTACATCCACTGTCCCAAGCCGGAAGGCGATG...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR TCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAAGGGAAGGCCATGAGCTaGGCTGAGAGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQEGKAMS*AERVLW
Trigger: CCAGAGAACCCTCTCAGCTCAGCTCATGGCCTTCCC...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTGGGATAGGGGGCAGATaGAGAGGACCAACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPGIGGR*RGPTGS
Trigger: ACTTCCCGTTGGTCCTCTGCATCTGCCCCCTATCCC...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAAGCTCGCCTCCCGGGCTaGAACTTTGGGGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQEARLPG*NFGGTV
Trigger: AACAGTTCCCCCAAAGTTGCAGCCCGGGAGGCGAGC...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGCGCCTCCACTGGGAGTaGGGGCTGAGGTGGTATGTC +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLRLHWE*GLRWYV
Trigger: GACATACCACCTCAGCCCCCACTCCCAGTGGAGGCG...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGAGCGCTGTAGGTAGCTaGTCACCCGCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQSAVGS*SPAPGL
Trigger: GAGACCTGGAGCGGGTGACCAGCTACCTACAGCGCT...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGCACCCAGCTCCAGGATaGTGGGTAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLHPAPG*WVGGPA
Trigger: AGCAGGGCCACCTACCCACCATCCTGGAGCTGGGTG...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCCTCCAGGGTCCTCCTaGCCTACTGTCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFPPGSS*PTVPSR
Trigger: CCGGGAAGGGACAGTAGGCCAGGAGGACCCTGGAGG...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGCTATGTTGCCCAGGCTaGTCTCAGGCTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AFKASSISAPAALCSVPWLCCPG*SQAPGL
Trigger: GAGCCCAGGAGCCTGAGACCAGCCTGGGCAACATAG...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATACCCGGGCTGCAACTTTaGGGGAACTGTTGCGCGCGG +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIPGLQL*GNCCAR
Trigger: CCGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGG...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCTCCTCCCGCCGGCCCTaGCGCACCATCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTSSRRP*RTIRSS
Trigger: GCTGCTGCGGATGGTGCGCCAGGGCCGGCGGGAGGA...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCGGCCATGAGCTGAGCTaGGAGGGTTCTCTGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVGHELS*EGSLGP
Trigger: AGGCCCCAGAGAACCCTCTCAGCTCAGCTCATGGCC...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGATCCACGCTGTCTACCTaGTCCCCACAGCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGSTLST*SPQRCR
Trigger: CCTACAGCGCTGTGGGGAGCAGGTAGACAGCGTGGA...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGGTCTCGGGCAACCAGGAGTTACAGGAATTTTGCTAAAGATTCCCACCTTCCTGTGGGTAGGTGGCCCTaGTTTGGGGAGCGCTTGCGC +
Preference number: 4 (lower is better)
Translates to: GSRATRSYRNFAKDSHLPVGRWP*FGERLR
Trigger: GCGCAAGCGCTCCCCAAAGCAGGGCCACCTACCCAC...AGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp CTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTTTGGGACCTCCTCCCCACTaGCTGGGCCCTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSRSVKSYWQVTRRKPGLGPPPH*LGPHPA
Trigger: AGCTGGGTGAGGGCCCAGGCAGTGGGGAGGAGGTCC...CAAACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTCTCCCCTGCCTGCCTTaGCCATTCTACCCAACAAGG +
Preference number: 4 (lower is better)
Translates to: FGNILNPPDRRSALPCLPLPCLP*PFYPTR
Trigger: CCTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAG...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCAGCCCCTGCTGCTCTGTaGTCTGTTCCTTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPAPAAL*SVPWCS
Trigger: GCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGC...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGCTCGCCTCCCGGGCTaGAACTTTGGGGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLARLPG*NFGGTV
Trigger: AACAGTTCCCCCAAAGTTGCAGCCCGGGAGGCGAGC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTGCGAGGTCGACTCCATaGCCAGGTCCTGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFARSTP*PGPGAG
Trigger: ACCTGCGCCAGGACCTGGGCATGGAGTCGACCTCGC...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTCCATGGCGCCCAGTaGATCGCCTTCCGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSLHGAQ*IAFRLG
Trigger: CCCAAGCCGGAAGGCGATGCACTGGGCGCCATGGAG...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIVHCVV*GASGQD
Trigger: GTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGAC...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp AGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATCACCCAGCTCCAGGATaGTGGGTAGGTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SDSWSYGQMPRIKVGLRNHPAPG*WVGGPA
Trigger: AGCAGGGCCACCTACCCACCATCCTGGAGCTGGGTG...ATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 72 bp CTAGGCCCCATCTTGCTGTCTTCCTGTGTTGGAATCTaGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LGPILLSSCVGI*PTKACQEGPPP
Trigger: TGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGATGGGGCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCACAAGGACTCCCTGGTaGGGCCCTTCACTTCCATGT +
Preference number: 4 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSTRTPW*GPSLPC
Trigger: ACATGGAAGTGAAGGGCCTCACCAGGGAGTCCTTGT...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATCTCTGGGGCCTGGGATaGCTTAAGAACCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLHKEVGHVQSTPSIDLWGLG*LKNQMA
Trigger: TGCCATTTGGTTCTTAAGTCATCCCAGGCCCCAGAG...ATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp AAGGAGAAGATGTCCACGTTGTTGCCCAGGTCAATCCACGTGACATTGGGGAACGGGAAGGCCATGAGCTaGGCTGAGAGGGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KEKMSTLLPRSIHVTLGNGKAMS*AERVLW
Trigger: CCAGAGAACCCTCTCAGCTCAGCTCATGGCCTTCCC...GTTCCCCAATGTCACGTGGATTGACCTGGGCAACAACGTGGACATCTTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAACTCAGATGGTCCTCCTaGCTCAGCTTCCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQELRWSS*LSFQRH
Trigger: GTGCCTTTGGAAGCTGAGGCAGGAGGACCATCTGAG...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR GCA 90 bp TATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTACAGTAGGCTGCCCTTGGTCTaGCGGGTGCCCATGCCGCCG +
Preference number: 4 (lower is better)
Translates to: YSFSGGKLLVFTMAQAYSRLPLV*RVPMPP
Trigger: CGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCT...ACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGCTCTCTCCGCCAGGCTaGCCTTGGTCTGCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKLSPPG*PWSAGC
Trigger: GCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAG...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp ACAAGAAGGAAGCCAGGTTTGTCACTTACCCTGCATGCTAAGGACATCAGAGCCGAGTGGGGGCTGAGGTaGTATGTCAGCTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: TRRKPGLSLTLHAKDIRAEWGLR*YVSCRH
Trigger: GTGCCGGCAGCTGACATACCACCTCAGCCCCCACTC...GGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCGTCTCGGGAGGTCAGTaGGATTCCCGACAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVVSGGQ*DSRQVH
Trigger: GTGGACCTGTCGGGAATCCCACTGACCTCCCGAGAC...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCAGCGCTGTAGGTAGCTaGTCACCCGCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVSAVGS*SPAPGL
Trigger: GAGACCTGGAGCGGGTGACCAGCTACCTACAGCGCT...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCCTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTCCAGCTCCAGGATGGTaGGTAGGTGGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GLSRSVKSYWQVTRRKPGPAPGW*VGGPAL
Trigger: CAAAGCAGGGCCACCTACCCACCATCCTGGAGCTGG...ACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCGTCTCCTTGCCCTCATaGTGGTCTTCGGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFVSLPS*WSSAGA
Trigger: GGCACCTGCCGAAGACCACCATGAGGGCAAGGAGAC...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCCTTTCTGTAGGTGGGTaGCCCAGGCCAATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSLSVGG*PRPIFG
Trigger: GCCAAAAATTGGCCTGGGCCACCCACCTACAGAAAG...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATCTGGGGGAAAGCTCTTaGTGTTCACAATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLGLHKEVGHVQSTPSIDLGESS*CSQWLR
Trigger: CCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAG...ATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 72 bp ACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTaGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TKACQEGPPPYC*PTRFKSDWLPV
Trigger: GACTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGACCAGGTCAATCCACGTaGCATTGGGGAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGPGQST*HWGTCW
Trigger: CCAGCAAGTTCCCCAATGTCACGTGGATTGACCTGG...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp CCCTTCACTTCCATGTCACGTCTGAGCTGCAGCTACAGTCTCCTTGCCCTCATGGATTCCCACCTTCCTTaGGTGGGGACACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PFTSMSRLSCSYSLLALMDSHLP*VGTHSS
Trigger: AGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATC...CATGAGGGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAGTGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTGTGGTCTTCGGCAGGTaGCACAGGGCCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFVVFGR*HRAPSR
Trigger: CCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCAC...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGAGGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGGCGCCCTCCCCTGCCTaGCTTGCCCATTCTACCCAA +
Preference number: 4 (lower is better)
Translates to: GGYKMRTFAKLGSFGSLQAPSPA*LAHSTQ
Trigger: TTGGGTAGAATGGGCAAGGCAGGCAGGGGAGGGCGC...CTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTAATTTCGGCCCCTGCTaGTCTGTGCTCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FGNILNPPDRRSALPCLPNFGPC*SVLCSL
Trigger: CAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATT...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCAAATTTCGGCCCCTGCTaGTCTGTGCTCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPNFGPC*SVLCSL
Trigger: CAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATT...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAAACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQETVDVA*QADDEV
Trigger: GACCTCATCATCAGCCTGGCACGCTACATCCACTGT...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp ACAAGAAGGAAGCCAGGTTTGTCACTTACCCTGCATGCTAAGGACATCAGAGCCGGCACAGCTTCTCCATaGCGCCCAGTGCATCGCCTT +
Preference number: 4 (lower is better)
Translates to: TRRKPGLSLTLHAKDIRAGTASP*RPVHRL
Trigger: AAGGCGATGCACTGGGCGCCATGGAGAAGCTGTGCC...GGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTGTCTCGGGAGGTCAGTaGGATTCCCGACAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFVSGGQ*DSRQVH
Trigger: GTGGACCTGTCGGGAATCCCACTGACCTCCCGAGAC...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp CTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTTTGAGGATGGTGGGTAGGTaGCCCTGCTTTGGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LSRSVKSYWQVTRRKPGLRMVGR*PCFGER
Trigger: GCGCTCCCCAAAGCAGGGCCACCTACCCACCATCCT...CAAACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCTTTCTGTAGGTGGGTaGCCCAGGCCAATTTTTGGC +
Preference number: 4 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSLSVGG*PRPIFG
Trigger: GCCAAAAATTGGCCTGGGCCACCCACCTACAGAAAG...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCTTGCCTTTCTGTAGGTaGGTGGCCCAGGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSLPFCR*VAQANF
Trigger: AAAATTGGCCTGGGCCACCCACCTACAGAAAGGCAA...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAACTGGGGGAAAGCTCTTaGTGTTCACAATGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQELGESS*CSQWLR
Trigger: CCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAG...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGCTGAGCACTACCACATaGCATCGTAGGCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AFKASSISAPAALCSVPWLSTTT*HRRLLC
Trigger: ACAGAGCAGCCTACGATGCCATGTGGTAGTGCTCAG...CCAAGGAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTTTTTTCAGCCAGCAGTaGGTAGGGAAGGTGGATAGG +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPFFSQQ*VGKVDR
Trigger: CCTATCCACCTTCCCTACCCACTGCTGGCTGAAAAA...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTCTGGTCTCAGGCTCCTaGGCTCAGATGGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFLVSGS*AQMVLL
Trigger: CAGGAGGACCATCTGAGCCCAGGAGCCTGAGACCAG...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCATCCGCAGCAGCTCCTaGACCATGCCGACTCGCCGG +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTIRSSS*TMPTRR
Trigger: CCGGCGAGTCGGCATGGTCCAGGAGCTGCTGCGGAT...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGCCAGGTTCCGGAAGCTaGCGTAGCGATACAGAACGT +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLPGSGS*RSDTER
Trigger: ACGTTCTGTATCGCTACGCCAGCTTCCGGAACCTGG...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTTCCATGTCACGTCTaGGCTGCAGCTACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVLPCHV*AAATVS
Trigger: GGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAG...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGATTCCCACCTTCCTTaGGTGGGGACACATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLDSHLP*VGTHSS
Trigger: AGAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCAAGTCATACTGGCAAGTaGCAAGAAGGAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPSHTGK*QEGSQV
Trigger: AACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACT...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGTCCACGCTGTCTACCTaGTCCCCACAGCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SKDIAIAGPMGRCLESRWSTLST*SPQRCR
Trigger: CCTACAGCGCTGTGGGGAGCAGGTAGACAGCGTGGA...CCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp AAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGACTTTATGCCTGTATaGATGGGCACCATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: KEVGHVQSTPSIDGTGVSDFMPV*MGTMSV
Trigger: GACAGACATGGTGCCCATGCATACAGGCATAAAGTC...CGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCACTGAACAGGACTTTATaGCTGTATGCATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPLNRTL*LYAWAP
Trigger: TGGTGCCCATGCATACAGGCATAAAGTCCTGTTCAG...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGCCTGTGTTGGAATCTTaGCTACCAAGGCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQPVLES*LPRPVK
Trigger: CTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGG...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTGCAGCTCCTGGACCATaGCGACTCGCCGGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: YCILFLGESSWCSQWLRLAAPGP*RLAGGR
Trigger: CCTACCACCGGCGAGTCGGCATGGTCCAGGAGCTGC...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCAGGATGGTGGGTAGGTaGCCCTGCTTTGGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTRMVGR*PCFGER
Trigger: GCGCTCCCCAAAGCAGGGCCACCTACCCACCATCCT...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTTCCTTGCCCTCATGGTaGTCTTCGGCAGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCASLPSW*SSAGAT
Trigger: TGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTTCCTTGCCCTCATGGTaGTCTTCGGCAGGTGCCACA +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFSLPSW*SSAGAT
Trigger: TGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCTGCCTAGAATCAAGGTaGGCCTCAGAAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSCLESR*ASEIGL
Trigger: CAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCA...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCAGGAGTTACAGGAAGGATATAGCGATAGCTaGTCCTATGGGCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: STPSIDGTGVSGNQELQEGYSDS*SYGQMP
Trigger: AGGCATCTGCCCATAGGACCAGCTATCGCTATATCC...TTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCATCCGCAGCAGCTCCTaGACCATGCCGACTCGCCGG +
Preference number: 4 (lower is better)
Translates to: LPGLNYLDLGVACYLEEIIRSSS*TMPTRR
Trigger: CCGGCGAGTCGGCATGGTCCAGGAGCTGCTGCGGAT...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTAGCCTTGAGGCGGCTTaGGACAGTGGATGTAGCGTG +
Preference number: 4 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCASLEAA*DSGCSV
Trigger: CACGCTACATCCACTGTCCCAAGCCGCCTCAAGGCT...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409083.7
3UTR CAA 72 bp CCTCCAGTTTGTTTCTCCCTCTCCCCAGCCATCTTGTaGGATCTGCCAAGGGATTGGACTCCTTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: PPVCFSLSPAIL*DLPRDWTPSLS
Trigger: GGACAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGAGAAACAAACTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTCCAGGTCAATCCACGTaGCATTGGGGAACTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFPGQST*HWGTCW
Trigger: CCAGCAAGTTCCCCAATGTCACGTGGATTGACCTGG...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCAATCCCCTTCCCCAGATaGTATGGTTTGCCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPIPFPR*YGLPFC
Trigger: ACAGAAAGGCAAACCATATCATCTGGGGAAGGGGAT...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GGGTCTCGGGCAACCAGGAGTTACAGGAATTTTGCTAAAGATTCCCACCTTCCTGCACCATGTCTGTCCTaGGCACTACCACATGGCATC +
Preference number: 4 (lower is better)
Translates to: GSRATRSYRNFAKDSHLPAPCLS*ALPHGI
Trigger: GATGCCATGTGGTAGTGCTCAGGACAGACATGGTGC...AGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp CTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTTTGGGGATAGGGGGCAGATaGAGAGGACCAACGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSRSVKSYWQVTRRKPGLGIGGR*RGPTGS
Trigger: ACTTCCCGTTGGTCCTCTGCATCTGCCCCCTATCCC...CAAACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTGGTCCTATGGGCAGATaGCTAGAATCAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAGPMGR*LESRWA
Trigger: GGCCCACCTTGATTCTAGGCATCTGCCCATAGGACC...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCATTAAAGCCCACCTTCTaGAGTCGGTTTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPLKPTF*SRFSGM
Trigger: CATTCCAGAAAACCGACTGCAGAAGGTGGGCTTTAA...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCCAGGGTGCTGAGTGCTaGCAGCAGCTGCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTQGAEC*QQLQDH
Trigger: ATGGTCCTGCAGCTGCTGCCAGCACTCAGCACCCTG...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGCAGGGTGCTGAGTGCTaGCAGCAGCTGCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKQGAEC*QQLQDH
Trigger: ATGGTCCTGCAGCTGCTGCCAGCACTCAGCACCCTG...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGACCAGCTCCAGGATGGTaGGTAGGTGGCCCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQSSWTELLGSRGCLLFRPAPGW*VGGPAL
Trigger: CAAAGCAGGGCCACCTACCCACCATCCTGGAGCTGG...TCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGCCCACCTTCCTTGAGTaGGGACACATTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRPTFLE*GHIPLV
Trigger: AACCAGAGGAATGTGTCCCCACTCAAGGAAGGTGGG...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCCCCCAGCCATCTTGTTaGATCTGCCAAGGGATTGGA +
Preference number: 4 (lower is better)
Translates to: SQWLRLTVPPAMCPFPQVPQPSC*ICQGIG
Trigger: TCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGG...GACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGGCTCCCAGTCTTCCTaGACTGAACTACTTGGATCT +
Preference number: 4 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLGSQSS*TELLGS
Trigger: AGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCATGGATAGGGGATTTCTaGACAGGACTTTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPWIGDF*TGLYAC
Trigger: ACAGGCATAAAGTCCTGTTCAGAAATCCCCTATCCA...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGGTACCTCCAGCCATGTaGCCATTTCCACAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGILPTKACQEGPPPYCLVPPAM*PFPQVF
Trigger: AAAGACTTGTGGAAATGGGCACATGGCTGGAGGTAC...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCGGGTTCTCTGGGGCCTaGGATGACTTAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: SQWLRLTVPPAMCPFPQVGFSGA*DDLRTK
Trigger: TTTGGTTCTTAAGTCATCCCAGGCCCCAGAGAACCC...GACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTGGGGACACATTCCTCTaGTTGGAGCTTGTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFGDTFL*LELVPL
Trigger: TAGGGGAACAAGCTCCAACCAGAGGAATGTGTCCCC...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCCCACCTTCCTTGAGTaGGGACACATTCCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAPTFLE*GHIPLV
Trigger: AACCAGAGGAATGTGTCCCCACTCAAGGAAGGTGGG...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCGGATATAGCGATAGCTaGTCCTATGGGCAGATGCCT +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFGYSDS*SYGQMP
Trigger: AGGCATCTGCCCATAGGACCAGCTATCGCTATATCC...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp ACAAGAAGGAAGCCAGGTTTGTCACTTACCCTGCATGCTAAGGACATCAGAGCCCTGAGCACTACCACATaGCATCGTAGGCTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: TRRKPGLSLTLHAKDIRALSTTT*HRRLLC
Trigger: ACAGAGCAGCCTACGATGCCATGTGGTAGTGCTCAG...GGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATATTTTTCAGCCAGCAGTaGGTAGGGAAGGTGGATAGG +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIFFSQQ*VGKVDR
Trigger: CCTATCCACCTTCCCTACCCACTGCTGGCTGAAAAA...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCTGCAGTCGGTTTTCTaGAATGTGTTGGTGGATTAC +
Preference number: 4 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSLQSVF*NVLVDY
Trigger: GTAATCCACCAACACATTCCAGAAAACCGACTGCAG...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGCTCCCAGTCTTCCTaGACTGAACTACTTGGATCT +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIGSQSS*TELLGS
Trigger: AGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCGCTGTCTTCCTGTGTTaGAATCTTGCCTACCAAGGC +
Preference number: 4 (lower is better)
Translates to: SQWLRLTVPPAMCPFPQVAVFLC*NLAYQG
Trigger: GCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC...GACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGCTTGAGGCAGGCCTGTaGCTTCCTTTTCACCAGCCC +
Preference number: 4 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKLEAGL*LPFHQP
Trigger: GGGCTGGTGAAAAGGAAGCCACAGGCCTGCCTCAAG...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
3UTR CAA 72 bp AACTGGGGTCTCGGGCAACCAGGAGTTACAGGAATTTaGCTAAAGATTCCCACCTTCCTTGAGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: NWGLGQPGVTGI*LKIPTFLEWGH
Trigger: GTGTCCCCACTCAAGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCCTTCCATGTCACGTCTaGGCTGCAGCTACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTLPCHV*AAATVS
Trigger: GGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAG...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCGCACCATGTCTGTCCTaGGCACTACCACATGGCATC +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTAPCLS*ALPHGI
Trigger: GATGCCATGTGGTAGTGCTCAGGACAGACATGGTGC...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGAGTCATACTGGCAAGTaGCAAGAAGGAAGCCAGGTT +
Preference number: 4 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRSHTGK*QEGSQV
Trigger: AACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACT...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGGACTTTATGCCTGTATaGATGGGCACCATGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRDFMPV*MGTMSV
Trigger: GACAGACATGGTGCCCATGCATACAGGCATAAAGTC...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATACCATCTTGTTGGATCTaGCAAGGGATTGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIPSCWI*QGIGLL
Trigger: AAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGG...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp ATTGGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTACCTGTGTTGGAATCTTaGCTACCAAGGCCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: IGSQSSWTELLGSRGCLLPVLES*LPRPVK
Trigger: CTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGG...TAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCGCCCCTGCTGCTCTGTaGTCTGTTCCTTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LPGLNYLDLGVACYLEEIAPAAL*SVPWCS
Trigger: GCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGC...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCTGTAGCTTTGTCCCTTaGCATCATGCCCAACAAGAG +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFCSFVP*HHAQQE
Trigger: CTCTTGTTGGGCATGATGGCAAGGGACAAAGCTACA...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR GCA 90 bp TCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SKDIAIAGPMGRCLESRWTVDVA*QADDEV
Trigger: GACCTCATCATCAGCCTGGCACGCTACATCCACTGT...CCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTCTTAACCCCCTATTCTACAGCTTTAGACTGAAGGCAAAAGCTCAAAGCATTGTCTCCTTGCCCTCATaGTGGTCTTCGGCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: ALNPLFYSFRLKAKAQSIVSLPS*WSSAGA
Trigger: GGCACCTGCCGAAGACCACCATGAGGGCAAGGAGAC...AATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp ACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTGGGTTCTCTGGGGCCTaGGATGACTTAAGAACCAAA +
Preference number: 4 (lower is better)
Translates to: TMAQAYSTSSHVPISTSLGFSGA*DDLRTK
Trigger: TTTGGTTCTTAAGTCATCCCAGGCCCCAGAGAACCC...AAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTAGGTTCAAGAGTGATTaGCTCCCAGTCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCARFKSD*LPVFLD
Trigger: GTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCT...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTGCTGTCTTCCTGTGTTaGAATCTTGCCTACCAAGGC +
Preference number: 4 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFAVFLC*NLAYQG
Trigger: GCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp GCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATATGGATAGGGGATTTCTaGACAGGACTTTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: AIAGPMGRCLESRWASEIWIGDF*TGLYAC
Trigger: ACAGGCATAAAGTCCTGTTCAGAAATCCCCTATCCA...TATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTGGTCCTATGGGCAGATaGCTAGAATCAAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFGPMGR*LESRWA
Trigger: GGCCCACCTTGATTCTAGGCATCTGCCCATAGGACC...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGGTCTCGGGCAACCAGGAGTTACAGGAATTTTGCTAAAGATTCCCACCTTCCTCCATCTTGTTGGATCTaGCAAGGGATTGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: GSRATRSYRNFAKDSHLPPSCWI*QGIGLL
Trigger: AAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGG...AGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp CCCTTCACTTCCATGTCACGTCTGAGCTGCAGCTACAGTCTCCTTGCCCTCATGCTTGGATCTAGGGGTTaGCTGTTATTTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PFTSMSRLSCSYSLLALMLGSRG*LLFRRD
Trigger: ATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAG...CATGAGGGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAGTGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR CCA 90 bp AGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATTCTTGGTGTTCACAATaGCTCAGGCTTACAGTACCT +
Preference number: 4 (lower is better)
Translates to: SDSWSYGQMPRIKVGLRNSWCSQ*LRLTVP
Trigger: AGGTACTGTAAGCCTGAGCCATTGTGAACACCAAGA...ATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCTCTTGGTGTTCACAATaGCTCAGGCTTACAGTACCT +
Preference number: 4 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVSWCSQ*LRLTVP
Trigger: AGGTACTGTAAGCCTGAGCCATTGTGAACACCAAGA...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCCTGCAGTCGGTTTTCTaGAATGTGTTGGTGGATTAC +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFLQSVF*NVLVDY
Trigger: GTAATCCACCAACACATTCCAGAAAACCGACTGCAG...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTCCAGGTTCCGGAAGCTaGCGTAGCGATACAGAACGT +
Preference number: 4 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFPGSGS*RSDTER
Trigger: ACGTTCTGTATCGCTACGCCAGCTTCCGGAACCTGG...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
3UTR CAA 72 bp AAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCTAAGGACATCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSYWQVTRRKPG*SLTLHAKDIRA
Trigger: GGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR TCA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCCTCTGGGGCCTGGGATaGCTTAAGAACCAAATGGCA +
Preference number: 4 (lower is better)
Translates to: LPGLNYLDLGVACYLEEILWGLG*LKNQMA
Trigger: TGCCATTTGGTTCTTAAGTCATCCCAGGCCCCAGAG...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTATGTCACGTCTGAGCTaGAGCTACAGTCTCCTTGCC +
Preference number: 4 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFMSRLS*SYSLLA
Trigger: GGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACAT...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGAGGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGCATGGCATCGTAGGCTaGTCTGTCAAAGGATATAGC +
Preference number: 4 (lower is better)
Translates to: GGYKMRTFAKLGSFGSLQHGIVG*SVKGYS
Trigger: GCTATATCCTTTGACAGAGCAGCCTACGATGCCATG...CTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCTTGGATCTAGGGGTTaGCTGTTATTTAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: VGILPTKACQEGPPPYCLLGSRG*LLFRRD
Trigger: ATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAG...CAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp ACAAGAAGGAAGCCAGGTTTGTCACTTACCCTGCATGCTAAGGACATCAGAGCCTGTCCCTTGCCATCATaGCCAACAAGAGGTTCTATA +
Preference number: 4 (lower is better)
Translates to: TRRKPGLSLTLHAKDIRACPLPS*PTRGSI
Trigger: TATAGAACCTCTTGTTGGGCATGATGGCAAGGGACA...GGCTCTGATGTCCTTAGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp CAGATATTCGCTCTAGCTTGTAAACTTCCCTGTGGTCAGCCTAAGCTCTTAACCTGCCTAGAATCAAGGTaGGCCTCAGAAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: QIFALACKLPCGQPKLLTCLESR*ASEIGL
Trigger: CAGCCCTATTTCTGAGGCCCACCTTGATTCTAGGCA...GGTTAAGAGCTTAGGCTGACCACAGGGAAGTTTACAAGCTAGAGCGAATATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTACAGTCCCCAGCCATCTTGTTaGATCTGCCAAGGGATTGGA +
Preference number: 4 (lower is better)
Translates to: YSFSGGKLLVFTMAQAYSPQPSC*ICQGIG
Trigger: TCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGG...ACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTTACTACAATAAAGGATaGTCTTGGGTGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPYYNKG*SWVSIL
Trigger: AAGAATTGACACCCAAGACCATCCTTTATTGTAGTA...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp TCGGCCCCTGCTGCTCTGTGCTCTGTTCCTTGGTGTAGCTTTGTTCCAGCTCCTTTGACTTTCATAAATTaGTTATGTTGGTGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SAPAALCSVPWCSFVPAPLTFIN*LCWWAK
Trigger: CTTTGCCCACCAACATAACCAATTTATGAAAGTCAA...AGGAGCTGGAACAAAGCTACACCAAGGAACAGAGCACAGAGCAGCAGGGGCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR TCA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTTCTACAGCTTTAGACTaGAGGCAAAAGCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSSTALD*RQKLKA
Trigger: TGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGA...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp GGAGGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTAAAGCCCACCTTCTaGAGTCGGTTTTCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GGYKMRTFAKLGSFGSLQLKPTF*SRFSGM
Trigger: CATTCCAGAAAACCGACTGCAGAAGGTGGGCTTTAA...CTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAACAATCACAGCTCATTaGATCCTCAATCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: SQSSWTELLGSRGCLLFRTITAH*ILNHPG
Trigger: GCCTGGGTGATTGAGGATGCAATGAGCTGTGATTGT...TCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CCA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTTTGCCTTTCTGTAGGTaGGTGGCCCAGGCCAATTTT +
Preference number: 4 (lower is better)
Translates to: YCILFLGESSWCSQWLRLLPFCR*VAQANF
Trigger: AAAATTGGCCTGGGCCACCCACCTACAGAAAGGCAA...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTCCAGATGATATGGTTTaGCTTTCTGTAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YCILFLGESSWCSQWLRLPDDMV*LSVGGW
Trigger: CCACCCACCTACAGAAAGGCAAACCATATCATCTGG...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTACAGTCCAGATGATATGGTTTaGCTTTCTGTAGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: YSFSGGKLLVFTMAQAYSPDDMV*LSVGGW
Trigger: CCACCCACCTACAGAAAGGCAAACCATATCATCTGG...ACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTACAGTGTACCTCCAGCCATGTaGCCATTTCCACAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: YSFSGGKLLVFTMAQAYSVPPAM*PFPQVF
Trigger: AAAGACTTGTGGAAATGGGCACATGGCTGGAGGTAC...ACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR GCA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTCTGAACAGGACTTTATaGCTGTATGCATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: YCILFLGESSWCSQWLRLLNRTL*LYAWAP
Trigger: TGGTGCCCATGCATACAGGCATAAAGTCCTGTTCAG...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp GCTCTTAACCCCCTATTCTACAGCTTTAGACTGAAGGCAAAAGCTCAAAGCATTAGGTTCAAGAGTGATTaGCTCCCAGTCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ALNPLFYSFRLKAKAQSIRFKSD*LPVFLD
Trigger: GTCCAGGAAGACTGGGAGCCAATCACTCTTGAACCT...AATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CCA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCAATTGGTTATGTTGGTaGGCAAAGTTCTTTAAGCTG +
Preference number: 4 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFNWLCW*AKFFKL
Trigger: CAGCTTAAAGAACTTTGCCCACCAACATAACCAATT...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR GCA 90 bp GCTCTTAACCCCCTATTCTACAGCTTTAGACTGAAGGCAAAAGCTCAAAGCATTCATGGCATCGTAGGCTaGTCTGTCAAAGGATATAGC +
Preference number: 4 (lower is better)
Translates to: ALNPLFYSFRLKAKAQSIHGIVG*SVKGYS
Trigger: GCTATATCCTTTGACAGAGCAGCCTACGATGCCATG...AATGCTTTGAGCTTTTGCCTTCAGTCTAAAGCTGTAGAATAGGGGGTTAAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 90 bp CGCCGGGGCTGGCTCTCTCCGCCAGGCTGCCCTTGGTCTGCCGGGTaGCCATGCCGCCGCCGCCCGCCGGGACTCTCCGCTCTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: RRGWLSPPGCPWSAG*PCRRRPPGLSALGR
Trigger: GCGGCCCAGAGCGGAGAGTCCCGGCGGGCGGCGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAGCCAGCCCCGGCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 90 bp GGCGCGGCGCCGGGGCTGGCTCTCTCCGCCAGGCTGCCCTTGGTCTaGCGGGTGCCCATGCCGCCGCCGCCCGCCGGGACTCTCCGCTCT +
Preference number: 5 (lower is better)
Translates to: GAAPGLALSARLPLV*RVPMPPPPAGTLRS
Trigger: AGAGCGGAGAGTCCCGGCGGGCGGCGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAGCCAGCCCCGGCGCCGCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 90 bp GGCTGGCTCTCTCCGCCAGGCTGCCCTTGGTCTGCCGGGTGCCCATaGCGCCGCCGCCCGCCGGGACTCTCCGCTCTGGGCCGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: GWLSPPGCPWSAGCP*RRRPPGLSALGREA
Trigger: GGCCTCGCGGCCCAGAGCGGAGAGTCCCGGCGGGCGGCGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAGCCAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS CCA 90 bp AGAAGTCCGGCCGTTCGCGTCGGGGGCCCGGCGCGGCGCCGGGGCTaGCTCTCTCCGCCAGGCTGCCCTTGGTCTGCCGGGTGCCCATGC +
Preference number: 5 (lower is better)
Translates to: RSPAVRVGGPARRRG*LSPPGCPWSAGCPC
Trigger: GCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAGCCAGCCCCGGCGCCGCGCCGGGCCCCCGACGCGAACGGCCGGACTTCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 90 bp CGGTGCCGCCTCCACTGGGAGTGGGGGCTGAGGTGGTATGTCAGCTaGCGGCACAGCTTCTCCATGGCGCCCAGTGCATCGCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: RCRLHWEWGLRWYVS*RHSFSMAPSASPSG
Trigger: GCCGGAAGGCGATGCACTGGGCGCCATGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS GCA 90 bp GTAAGAGCCCAGCTCCCCCAGGCTGAGCTGGGGGAGGCCCTGCTCTaGTGGCCTAGGGTGGGCACCCTAGGCAGACAGCAGTGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: VRAQLPQAELGEALL*WPRVGTLGRQQWLQ
Trigger: TTGCAGCCACTGCTGTCTGCCTAGGGTGCCCACCCTAGGCCAGCAGAGCAGGGCCTCCCCCAGCTCAGCCTGGGGGAGCTGGGCTCTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS GCA 90 bp CGGTGCCGCCTCCACTGGGAGTGGGGGCTGAGGTGGTATGTCAGCTaGCGGCACAGCTTCTCCATGGCGCCCAGTGCATCGCCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RCRLHWEWGLRWYVS*RHSFSMAPSASPSC
Trigger: GCAGGAAGGCGATGCACTGGGCGCCATGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS CCA 90 bp AGAGCCCAGCTCCCCCAGGCTGAGCTGGGGGAGGCCCTGCTCTGCTaGCCTAGGGTGGGCACCCTAGGCAGACAGCAGTGGCTGCAAACA +
Preference number: 5 (lower is better)
Translates to: RAQLPQAELGEALLC*PRVGTLGRQQWLQT
Trigger: TGTTTGCAGCCACTGCTGTCTGCCTAGGGTGCCCACCCTAGGCCAGCAGAGCAGGGCCTCCCCCAGCTCAGCCTGGGGGAGCTGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS CCA 90 bp TTCACCAGCCCCCGGTGCCGCCTCCACTGGGAGTGGGGGCTGAGGTaGTATGTCAGCTGCCGGCACAGCTTCTCCATGGCGCCCAGTGCA +
Preference number: 5 (lower is better)
Translates to: FTSPRCRLHWEWGLR*YVSCRHSFSMAPSA
Trigger: TGCACTGGGCGCCATGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCGGGGGCTGGTGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409887.3
ENST00000470794.2
CDS CCA 90 bp CCAGCTCCACGCTGTCTACCTGCTCCCCACAGCGCTGTAGGTAGCTaGTCACCCGCTCCAGGTCTCGGGAGGTCAGTGGGATTCCCGACA +
Preference number: 5 (lower is better)
Translates to: PAPRCLPAPHSAVGS*SPAPGLGRSVGFPT
Trigger: TGTCGGGAATCCCACTGACCTCCCGAGACCTGGAGCGGGTGACCAGCTACCTACAGCGCTGTGGGGAGCAGGTAGACAGCGTGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409083.7
ENST00000409887.3
ENST00000470794.2
CDS CCA 90 bp GTCTCGGGAGGTCAGTGGGATTCCCGACAGGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGACAGCCTTGAGGCGGCTTGGGACAGT +
Preference number: 5 (lower is better)
Translates to: VSGGQWDSRQVHCVV*GASGQDSLEAAWDS
Trigger: ACTGTCCCAAGCCGCCTCAAGGCTGTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACCTCCCGAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS GCA 90 bp GTTGCCATTGAGTGCCAGTGTGGTGAGGCGGGGCAGGGTGCTGAGTaGTGGCAGCAGCTGCAGGACCATGTCGTCCGTGAGGCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: VAIECQCGEAGQGAE*WQQLQDHVVREACE
Trigger: TTCACAGGCCTCACGGACGACATGGTCCTGCAGCTGCTGCCAGCACTCAGCACCCTGCCCCGCCTCACCACACTGGCACTCAATGGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409083.7
ENST00000409887.3
ENST00000470794.2
CDS GCA 90 bp CCGGCCAGGACAGCCTTGAGGCGGCTTGGGACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTCGTGTGTGATGGGGTCCACCAGGTT +
Preference number: 5 (lower is better)
Translates to: PARTALRRLGTVDVA*QADDEVVCDGVHQV
Trigger: AACCTGGTGGACCCCATCACACACGACCTCATCATCAGCCTGGCACGCTACATCCACTGTCCCAAGCCGCCTCAAGGCTGTCCTGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS GCA 90 bp GGCGCCCAGTGCATCGCCTTCCGGCTTGGGACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTCGTGTGTGATGGGGTCCACCAGGTT +
Preference number: 5 (lower is better)
Translates to: GAQCIAFRLGTVDVA*QADDEVVCDGVHQV
Trigger: AACCTGGTGGACCCCATCACACACGACCTCATCATCAGCCTGGCACGCTACATCCACTGTCCCAAGCCGGAAGGCGATGCACTGGGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS CCA 90 bp GTCTCGGGAGGTCAGTGGGATTCCCGACAGGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGACAGCCTTGAGGACTGTTCATCCACC +
Preference number: 5 (lower is better)
Translates to: VSGGQWDSRQVHCVV*GASGQDSLEDCSST
Trigger: GGTGGATGAACAGTCCTCAAGGCTGTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACCTCCCGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS-3UTR CAA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCTCTGGGGGAAAGCTCTaGGTGTTCACAATGGCTCAG +
Preference number: 5 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSSGGKL*VFTMAQ
Trigger: CTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGA...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR CAA 90 bp TCCTTGCCCTCATGGTGGTCTTCGGCAGGTGCCACAGGGCCCCCTCCAGGGTCCAGATTCCCACCTTCCTaGAGTGGGGACACATTCCTC +
Preference number: 5 (lower is better)
Translates to: SLPSWWSSAGATGPPPGSRFPPS*SGDTFL
Trigger: GAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATCT...GGACCCTGGAGGGGGCCCTGTGGCACCTGCCGAAGACCACCATGAGGGCAAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR CAA 90 bp GCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCGGCCAGGACAGCCTaGAGGCGGCTTGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: AVFLCWNLAYQGLSRGSSPARTA*RRLGTV
Trigger: CACTGTCCCAAGCCGCCTCAAGGCTGTCCTGGCCGG...GGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR CAA 90 bp CCCTTCACTTCCATGTCACGTCTGAGCTGCAGCTACAGTCTCCTTGCCCTCATGTCCCGGGCTGCAACTTaGGGGGAACTGTTGCGCGCG +
Preference number: 5 (lower is better)
Translates to: PFTSMSRLSCSYSLLALMSRAAT*GELLRA
Trigger: CGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGGA...CATGAGGGCAAGGAGACTGTAGCTGCAGCTCAGACGTGACATGGAAGTGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS-3UTR CAA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGATCCCGGGCTGCAACTTaGGGGGAACTGTTGCGCGCG +
Preference number: 5 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGSRAAT*GELLRA
Trigger: CGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGGA...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGCCGGCCAGGACAGCCTaGAGGCAGGCCTGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRPARTA*RQACGF
Trigger: GAAGCCACAGGCCTGCCTCAAGGCTGTCCTGGCCGG...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CAA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGAGCCCGGGTCAACCGGTaGCCATTGAGTGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGARVNR*PLSASV
Trigger: CACACTGGCACTCAATGGCAACCGGTTGACCCGGGC...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGGGCAACCTCTCCCCAGCCATCTaGTTGGATCTGCCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: VGHVQSTPSIDGTGVSGNLSPAI*LDLPRD
Trigger: ATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAG...GTTGCCCGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTCCTCCCCTGCCTGCCTaGCCCATTCTACCCAACAAG +
Preference number: 5 (lower is better)
Translates to: KACQEGPPPYCLPTRFKSPPLPA*PILPNK
Trigger: CTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAGG...ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTGCCCGGGTCAACCGGTaGCCATTGAGTGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSARVNR*PLSASV
Trigger: CACACTGGCACTCAATGGCAACCGGTTGACCCGGGC...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp ACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGCTTTGGGGAGCGCTaGCGCAGGCTGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TMAQAYSTSSHVPISTSLCFGER*RRLSRK
Trigger: CTTCCTGCTCAGCCTGCGCAAGCGCTCCCCAAAGCA...AAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAGGAGGTAGGCCACGTTCAGTCCACCCCTAGCATAGATGGAACTGGGGTCTCGAGATTCCCACCTTCCTaGAGTGGGGACACATTCCTC +
Preference number: 5 (lower is better)
Translates to: KEVGHVQSTPSIDGTGVSRFPPS*SGDTFL
Trigger: GAGGAATGTGTCCCCACTCAAGGAAGGTGGGAATCT...CGAGACCCCAGTTCCATCTATGCTAGGGGTGGACTGAACGTGGCCTACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TGGGCCTCAGAAATAGGGCTGGGTCTCCATAAGGAGGTAGGCCACGTTCAGTCCCCTGGACTGAACTACTaGGATCTAGGGGTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: WASEIGLGLHKEVGHVQSPGLNY*DLGVAC
Trigger: ACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGG...GGACTGAACGTGGCCTACCTCCTTATGGAGACCCAGCCCTATTTCTGAGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GGCCTGTCTAGGTCAGTGAAGTCATACTGGCAAGTGACAAGAAGGAAGCCAGGTGTCAACCGGTTGCCATaGAGTGCCAGTGTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GLSRSVKSYWQVTRRKPGVNRLP*SASVVR
Trigger: CCTCACCACACTGGCACTCAATGGCAACCGGTTGAC...ACCTGGCTTCCTTCTTGTCACTTGCCAGTATGACTTCACTGACCTAGACAGGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCATCAATCCACGTGACATaGGGGAACTTGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: ESCLPRPVKRVLPHTVCPSIHVT*GNLLGS
Trigger: GGATCCCAGCAAGTTCCCCAATGTCACGTGGATTGA...TGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTTGGTAGGCAAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTGATTGGCTCCCAGGAGAAGATGTCCACGTaGTTGCCCAGGTCAATCCAC +
Preference number: 5 (lower is better)
Translates to: RVLPHTVCPQGSRVIGSQEKMST*LPRSIH
Trigger: GTGGATTGACCTGGGCAACAACGTGGACATCTTCTC...CTGGGAGCCAATCACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCTTGCTGTCTTCCTGTGTTGGAATCTTGCCTACCAAGGCCTGTCAAGAGGGTCGCAGCTACAGTCTCCTaGCCCTCATGGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: SCCLPVLESCLPRPVKRVAATVS*PSWWSS
Trigger: CGAAGACCACCATGAGGGCAAGGAGACTGTAGCTGC...GACCCTCTTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCCTCCCCTGCCTGCCTaGCCCATTCTACCCAACAAG +
Preference number: 5 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAPPLPA*PILPNK
Trigger: CTTGTTGGGTAGAATGGGCAAGGCAGGCAGGGGAGG...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTTCTGGGGGAAAGCTCTaGGTGTTCACAATGGCTCAG +
Preference number: 5 (lower is better)
Translates to: FGNILNPPDRRSALPCLPSGGKL*VFTMAQ
Trigger: CTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGA...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGTCCCCAGCCATCTTGTaGGATCTGCCAAGGGATTGG +
Preference number: 5 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLSPAIL*DLPRDW
Trigger: CCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGA...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGGACGGATTCTCTATGTaGCCCAGGCTGGTCTCAGGC +
Preference number: 5 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRDGFSM*PRLVSG
Trigger: GCCTGAGACCAGCCTGGGCAACATAGAGAATCCGTC...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CAA 90 bp GCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGGGGATCAATCCACGTGACATaGGGGAACTTGCTGGGATCC +
Preference number: 5 (lower is better)
Translates to: AQAYSTSSHVPISTSLWGSIHVT*GNLLGS
Trigger: GGATCCCAGCAAGTTCCCCAATGTCACGTGGATTGA...TCCCCAAAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGAAGATGTCCACGTTGTaGCCCAGGTCAATCCACGTG +
Preference number: 5 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLKMSTL*PRSIHV
Trigger: CACGTGGATTGACCTGGGCAACAACGTGGACATCTT...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGAGAAGATGTCCACGTaGTTGCCCAGGTCAATCCAC +
Preference number: 5 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLEKMST*LPRSIH
Trigger: GTGGATTGACCTGGGCAACAACGTGGACATCTTCTC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCCTTCCCCAGATGATATGGTTTGCCTTTCTGTAGGTGGGTGGCCCAGGCCAGACACATTCCTCTGGTaGGAGCTTGTTCCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SPSPDDMVCLSVGGWPRPDTFLW*ELVPLN
Trigger: ATTTAGGGGAACAAGCTCCAACCAGAGGAATGTGTC...TGGCCTGGGCCACCCACCTACAGAAAGGCAAACCATATCATCTGGGGAAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTTGGCAATATCCTTAACCCACCTGATAGGAGAAGCGCCCTCCCCTGCCTGCCTTCCTGTGTTGGAATCTaGCCTACCAAGGCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: FGNILNPPDRRSALPCLPSCVGI*PTKACQ
Trigger: TTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGA...AGGCAGGCAGGGGAGGGCGCTTCTCCTATCAGGTGGGTTAAGGATATTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGGTGACATTGGGGAACTaGCTGGGATCCTTAAGGATG +
Preference number: 5 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLVTLGN*LGSLRM
Trigger: CATCCTTAAGGATCCCAGCAAGTTCCCCAATGTCAC...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTACAGTTGCTTTGGGGAGCGCTaGCGCAGGCTGAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YSFSGGKLLVFTMAQAYSCFGER*RRLSRK
Trigger: CTTCCTGCTCAGCCTGCGCAAGCGCTCCCCAAAGCA...ACTGTAAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCCCTCTCCCCAGCCATCTTGTTGGATCTGCCAAGGGATTGGACTCCTTCATTGAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: SLSPAILLDLPRDWTPSLRRKPG*SLTLHA
Trigger: AGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCT...CAATGAAGGAGTCCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTTCCCCAGCCATCTTGTaGGATCTGCCAAGGGATTGG +
Preference number: 5 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSSPAIL*DLPRDW
Trigger: CCAATCCCTTGGCAGATCCAACAAGATGGCTGGGGA...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGCCTCCCCCATACTGTTaGCCCACAAGGTTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRPPPYC*PTRFKS
Trigger: ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGG...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTGGCCAAGTTGTAGCTTaGTCCCTTGCCATCATGCCC +
Preference number: 5 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSGQVVA*SLAIMP
Trigger: GGGCATGATGGCAAGGGACAAAGCTACAACTTGGCC...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS-3UTR CAA 90 bp TCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTCTGTTCGGCCCAGGCCAATTTTaGGCAATATCCTTAACCCAC +
Preference number: 5 (lower is better)
Translates to: SKHLRPPQFRPLLLCALFGPGQF*AISLTH
Trigger: GTGGGTTAAGGATATTGCCAAAAATTGGCCTGGGCC...GAACAGAGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATGGATCTGCCAAGGGATaGGACTCCTTCATTGTCCTA +
Preference number: 5 (lower is better)
Translates to: SDSWSYGQMPRIKVGLRNGSAKG*DSFIVL
Trigger: TAGGACAATGAAGGAGTCCAATCCCTTGGCAGATCC...ATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCCTGGACTGAACTACTaGGATCTAGGGGTTGCCTGT +
Preference number: 5 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSPGLNY*DLGVAC
Trigger: ACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGG...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TTCACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCCTCCCCCATACTGTTaGCCCACAAGGTTCAAGAGT +
Preference number: 5 (lower is better)
Translates to: FTMAQAYSTSSHVPISTSPPPYC*PTRFKS
Trigger: ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGG...ACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GGCTCCCAGTCTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTACTCTAGGCCCCATCTaGCTGTCTTCCTGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: GSQSSWTELLGSRGCLLFTLGPI*LSSCVG
Trigger: TCCAACACAGGAAGACAGCAAGATGGGGCCTAGAGT...AAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAGACTGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GGGTATAAGATGAGAACCTTTGCTAAGTTAGGTTCCTTTGGGAGCCTCCAGTTTGTCAACCGGTTGCCATaGAGTGCCAGTGTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GYKMRTFAKLGSFGSLQFVNRLP*SASVVR
Trigger: CCTCACCACACTGGCACTCAATGGCAACCGGTTGAC...AAACTGGAGGCTCCCAAAGGAACCTAACTTAGCAAAGGTTCTCATCTTATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTGCAGCTACAGTCTCCTaGCCCTCATGGTGGTCTTCG +
Preference number: 5 (lower is better)
Translates to: YCILFLGESSWCSQWLRLAATVS*PSWWSS
Trigger: CGAAGACCACCATGAGGGCAAGGAGACTGTAGCTGC...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GGGTCTCGGGCAACCAGGAGTTACAGGAATTTTGCTAAAGATTCCCACCTTCCTGGCCCAGGCCAATTTTaGGCAATATCCTTAACCCAC +
Preference number: 5 (lower is better)
Translates to: GSRATRSYRNFAKDSHLPGPGQF*AISLTH
Trigger: GTGGGTTAAGGATATTGCCAAAAATTGGCCTGGGCC...AGGAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCCTGGTTGCCCGAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp GATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGGTGGGCCTCAGAAATAGGGACACATTCCTCTGGTaGGAGCTTGTTCCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: DSWSYGQMPRIKVGLRNRDTFLW*ELVPLN
Trigger: ATTTAGGGGAACAAGCTCCAACCAGAGGAATGTGTC...CCTATTTCTGAGGCCCACCTTGATTCTAGGCATCTGCCCATAGGACCAGCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp ACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTAGAAGGAAGCCAGGTTaGTCACTTACCCTGCATGCT +
Preference number: 5 (lower is better)
Translates to: TMAQAYSTSSHVPISTSLRRKPG*SLTLHA
Trigger: AGCATGCAGGGTAAGTGACAAACCTGGCTTCCTTCT...AAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTTCCTGTGTTGGAATCTaGCCTACCAAGGCCTGTCAA +
Preference number: 5 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCASCVGI*PTKACQ
Trigger: TTGACAGGCCTTGGTAGGCAAGATTCCAACACAGGA...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp ACAATGGCTCAGGCTTACAGTACCTCCAGCCATGTGCCCATTTCCACAAGTCTTTGCTGTCTTCCTGTGTaGGAATCTTGCCTACCAAGG +
Preference number: 5 (lower is better)
Translates to: TMAQAYSTSSHVPISTSLCCLPV*ESCLPR
Trigger: CCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCA...AAGACTTGTGGAAATGGGCACATGGCTGGAGGTACTGTAAGCCTGAGCCATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCCTCTCCCCAGCCATCTaGTTGGATCTGCCAAGGGAT +
Preference number: 5 (lower is better)
Translates to: LPGLNYLDLGVACYLEEILSPAI*LDLPRD
Trigger: ATCCCTTGGCAGATCCAACAAGATGGCTGGGGAGAG...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TCTGTCAAAGGATATAGCGATAGCTGGTCCTATGGGCAGATGCCTAGAATCAAGACTCTAGGCCCCATCTaGCTGTCTTCCTGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: SVKGYSDSWSYGQMPRIKTLGPI*LSSCVG
Trigger: TCCAACACAGGAAGACAGCAAGATGGGGCCTAGAGT...CTTGATTCTAGGCATCTGCCCATAGGACCAGCTATCGCTATATCCTTTGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTAAGATGTCCACGTTGTaGCCCAGGTCAATCCACGTG +
Preference number: 5 (lower is better)
Translates to: YCILFLGESSWCSQWLRLKMSTL*PRSIHV
Trigger: CACGTGGATTGACCTGGGCAACAACGTGGACATCTT...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAGGCCTGTCAAGAGGGTCCTCCCCCATACTGTTTGCCCACAAGGTTCAAGAGTAAATTTCGCCTACTGTaGTCAGATATTAGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: KACQEGPPPYCLPTRFKSKFRLL*SDISSP
Trigger: TGGACTGCTAATATCTGACAACAGTAGGCGAAATTT...ACTCTTGAACCTTGTGGGCAAACAGTATGGGGGAGGACCCTCTTGACAGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTGGATCTGCCAAGGGATaGGACTCCTTCATTGTCCTA +
Preference number: 5 (lower is better)
Translates to: YCILFLGESSWCSQWLRLGSAKG*DSFIVL
Trigger: TAGGACAATGAAGGAGTCCAATCCCTTGGCAGATCC...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTTGCTGTCTTCCTGTGTaGGAATCTTGCCTACCAAGG +
Preference number: 5 (lower is better)
Translates to: YCILFLGESSWCSQWLRLCCLPV*ESCLPR
Trigger: CCTTGGTAGGCAAGATTCCAACACAGGAAGACAGCA...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp AAAAGCTCAAAGCATTTAAGGCCTCCTCAATTTCGGCCCCTGCTGCTCTGTGCTAAATTTCGCCTACTGTaGTCAGATATTAGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: KSSKHLRPPQFRPLLLCAKFRLL*SDISSP
Trigger: TGGACTGCTAATATCTGACAACAGTAGGCGAAATTT...AGCACAGAGCAGCAGGGGCCGAAATTGAGGAGGCCTTAAATGCTTTGAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp TACTGTATTCTTTTTCTGGGGGAAAGCTCTTGGTGTTCACAATGGCTCAGGCTTGGAGTTACAGGAATTTaGCTAAAGATTCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: YCILFLGESSWCSQWLRLGVTGI*LKIPTF
Trigger: GAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCC...AAGCCTGAGCCATTGTGAACACCAAGAGCTTTCCCCCAGAAAAAGAATACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS-3UTR CAA 90 bp CTTCCTGGACTGAACTACTTGGATCTAGGGGTTGCCTGTTATTTAGAAGAGATCGGAGTTACAGGAATTTaGCTAAAGATTCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: LPGLNYLDLGVACYLEEIGVTGI*LKIPTF
Trigger: GAAGGTGGGAATCTTTAGCAAAATTCCTGTAACTCC...GATCTCTTCTAAATAACAGGCAACCCCTAGATCCAAGTAGTTCAGTCCAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS CCA 72 bp GCCGCCCGTGCGCGCTCGCCTCCCGGGCTGCAACTTTaGGGGAACTGTTGCGCGCGGGCGTCGCGGGGGCGG +
Preference number: 6 (lower is better)
Translates to: AARARSPPGLQL*GNCCARASRGR
Trigger: CCGCCCCCGCGACGCCCGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGGAGGCGAGCGCGCACGGGCGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS CAA 72 bp GGCCGCCCGTGCGCGCTCGCCTCCCGGGCTGCAACTTaGGGGGAACTGTTGCGCGCGGGCGTCGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: GRPCALASRAAT*GELLRAGVAGA
Trigger: CGCCCCCGCGACGCCCGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGGAGGCGAGCGCGCACGGGCGGCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 72 bp GCCCCTCGGCCGCCCGTGCGCGCTCGCCTCCCGGGCTaGAACTTTGGGGGAACTGTTGCGCGCGGGCGTCGC +
Preference number: 6 (lower is better)
Translates to: APRPPVRARLPG*NFGGTVARGRR
Trigger: GCGACGCCCGCGCGCAACAGTTCCCCCAAAGTTGCAGCCCGGGAGGCGAGCGCGCACGGGCGGCCGAGGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 72 bp TCTCCGCCAGGCTGCCCTTGGTCTGCCGGGTGCCCATaGCGCCGCCGCCCGCCGGGACTCTCCGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: SPPGCPWSAGCP*RRRPPGLSALG
Trigger: GCCCAGAGCGGAGAGTCCCGGCGGGCGGCGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS GCA 72 bp TGGCTCTCTCCGCCAGGCTGCCCTTGGTCTGCCGGGTaGCCATGCCGCCGCCGCCCGCCGGGACTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: WLSPPGCPWSAG*PCRRRPPGLSA
Trigger: AGCGGAGAGTCCCGGCGGGCGGCGGCGGCATGGGCACCCGGCAGACCAAGGGCAGCCTGGCGGAGAGAGCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409083.7
ENST00000470794.2
CDS TCA 72 bp CCAGCCCCCGGTGCCGCCTCCACTGGGAGTGGGGGCTaGGGTGGTATGTCAGCTGCCGGCACAGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: PAPGAASTGSGG*GGMSAAGTASP
Trigger: TGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCGGGGGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409887.3
ENST00000470794.2
CDS CCA 72 bp CCCCGGTGCCGCCTCCACTGGGAGTGGGGGCTGAGGTaGTATGTCAGCTGCCGGCACAGCTTCTCCATGGCG +
Preference number: 6 (lower is better)
Translates to: PRCRLHWEWGLR*YVSCRHSFSMA
Trigger: CGCCATGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAGGCGGCACCGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409887.3
ENST00000470794.2
CDS TCA 72 bp GCCTTCCTGCAGAGGCAACCATGGGTGGTAGGGCCCTaGGTGGCTGGGTGCACCAGTCTCAGCCCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: AFLQRQPWVVGP*VAGCTSLSPQA
Trigger: AGCCTGGGGGCTGAGACTGGTGCACCCAGCCACTCAGGGCCCTACCACCCATGGTTGCCTCTGCAGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS GCA 72 bp GAGTGCCAGTGTGGTGAGGCGGGGCAGGGTGCTGAGTaGTGGCAGCAGCTGCAGGACCATGTCGTCCGTGAG +
Preference number: 6 (lower is better)
Translates to: ECQCGEAGQGAE*WQQLQDHVVRE
Trigger: CTCACGGACGACATGGTCCTGCAGCTGCTGCCAGCACTCAGCACCCTGCCCCGCCTCACCACACTGGCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409083.7
ENST00000409887.3
ENST00000470794.2
CDS GCA 72 bp CTCCACTGGGAGTGGGGGCTGAGGTGGTATGTCAGCTaGCGGCACAGCTTCTCCATGGCGCCCAGTGCATCG +
Preference number: 6 (lower is better)
Translates to: LHWEWGLRWYVS*RHSFSMAPSAS
Trigger: CGATGCACTGGGCGCCATGGAGAAGCTGTGCCGGCAGCTGACATACCACCTCAGCCCCCACTCCCAGTGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409887.3
ENST00000470794.2
CDS CCA 72 bp GGTCAGTGGGATTCCCGACAGGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGACAGCCTTGAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: GQWDSRQVHCVV*GASGQDSLEAA
Trigger: AGCCGCCTCAAGGCTGTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS CCA 72 bp GGTCAGTGGGATTCCCGACAGGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGACAGCCTTGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: GQWDSRQVHCVV*GASGQDSLEAG
Trigger: GCCTGCCTCAAGGCTGTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470794.2
CDS CCA 72 bp GTAGCTGGTCACCCGCTCCAGGTCTCGGGAGGTCAGTaGGATTCCCGACAGGTCCACTGTGTTGTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: VAGHPLQVSGGQ*DSRQVHCVVWG
Trigger: CCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACCTCCCGAGACCTGGAGCGGGTGACCAGCTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409083.7
ENST00000409887.3
ENST00000470794.2
CDS CCA 72 bp GGTCAGTGGGATTCCCGACAGGTCCACTGTGTTGTCTaGGGGGCTTCCGGCCAGGACAGCCTTGAGGACTGT +
Preference number: 6 (lower is better)
Translates to: GQWDSRQVHCVV*GASGQDSLEDC
Trigger: ACAGTCCTCAAGGCTGTCCTGGCCGGAAGCCCCCCAGACAACACAGTGGACCTGTCGGGAATCCCACTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409887.3
CDS GCA 72 bp ACAGCCTTGAGGCGGCTTGGGACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTCGTGTGTGATGGGGTC +
Preference number: 6 (lower is better)
Translates to: TALRRLGTVDVA*QADDEVVCDGV
Trigger: GACCCCATCACACACGACCTCATCATCAGCCTGGCACGCTACATCCACTGTCCCAAGCCGCCTCAAGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409083.7
CDS GCA 72 bp TGCATCGCCTTCCGGCTTGGGACAGTGGATGTAGCGTaGCAGGCTGATGATGAGGTCGTGTGTGATGGGGTC +
Preference number: 6 (lower is better)
Translates to: CIAFRLGTVDVA*QADDEVVCDGV
Trigger: GACCCCATCACACACGACCTCATCATCAGCCTGGCACGCTACATCCACTGTCCCAAGCCGGAAGGCGATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470794.2