RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC74A (Homo sapiens)

Ensembl gene IDs: ENSG00000100565

Ensembl transcript IDs: ENST00000216450.7, ENST00000393774.7, ENST00000460005.1, ENST00000484640.5, ENST00000555189.1, ENST00000557453.5

Found 396 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGATGGCCAGCATCTGGCCCAGGTGCTC +
Preference number: 1 (lower is better)
Translates to: GHSSPCVEVIPAQIQ*REPHVDGQHLAQVL
Trigger: GAGCACCTGGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 90 bp TGCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCTAGGGCCAGAGCCACCTCATTCCCAA +
Preference number: 1 (lower is better)
Translates to: CRCHCHRYPGRPGSG*VGGLPLGPEPPHSQ
Trigger: TTGGGAATGAGGTGGCTCTGGCCCTAGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR TCA 90 bp GGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGAC +
Preference number: 1 (lower is better)
Translates to: GERPCTALNTTSSCG*TAYTPSNVFMNCSD
Trigger: GTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR GCA 90 bp GAGATTTCAGCCACCTCTTGCTCTCCTCCCTGCCACCATCCGACTTaGGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGT +
Preference number: 1 (lower is better)
Translates to: EISATSCSPPCHHPT*EDSSRRDFFLDQTC
Trigger: ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGAGAGCAAGAGGTGGCTGAAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 90 bp GGACTTCCCCTAGGGCCAGAGCCACCTCATTCCCAAAGCCATTCATaGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCAT +
Preference number: 1 (lower is better)
Translates to: GLPLGPEPPHSQSHS*RDPALSGSHYPGDH
Trigger: ATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGAATGAGGTGGCTCTGGCCCTAGGGGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR CCA 90 bp CAATCTCATCTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATaGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTTGCCACC +
Preference number: 1 (lower is better)
Translates to: QSHLLSQAEEACHCP*CQDPLEGSCQLLAT
Trigger: GGTGGCAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGATGAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR TCA 90 bp TCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTaGATACCACGTCCAGCTGCGGGTGAACGGCATACACTCCGTCCA +
Preference number: 1 (lower is better)
Translates to: STRRWFSWERGLVLP*IPRPAAGERHTLRP
Trigger: TGGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR GCA 90 bp GTTTGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTaGCTTGAATACCACGTCCAGCTGCGGGTGAACGGCATACACTCC +
Preference number: 1 (lower is better)
Translates to: VCQQEDGFLGREALY*LEYHVQLRVNGIHS
Trigger: GGAGTGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR GCA 90 bp CAACAGTCGGCGGGGATTCGGCCTCACAGTAGAGCATTTTATCGCTaGTCTGTCGTACTGGCTCAATTTCAATCTCATCTTCTGTCTCAG +
Preference number: 1 (lower is better)
Translates to: QQSAGIRPHSRAFYR*SVVLAQFQSHLLSQ
Trigger: CTGAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTGTGAGGCCGAATCCCCGCCGACTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR TCA 90 bp AGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTaGCCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCA +
Preference number: 1 (lower is better)
Translates to: SSPCLSSHRASLSPP*PGTGSGGPCFALSS
Trigger: TGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR GCA 90 bp TGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTaGTATGGCTTCATCGTGTTCAAGAAACTGAAGTTCACCATGCCT +
Preference number: 1 (lower is better)
Translates to: CEDSSRRDFFLDQTC*YGFIVFKKLKFTMP
Trigger: AGGCATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 90 bp ACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTC +
Preference number: 1 (lower is better)
Translates to: TMPVFSSSFFITSLT*YWFRGTLFCSIITF
Trigger: GAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 90 bp GGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGCTATaGCTTCATCGTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTT +
Preference number: 1 (lower is better)
Translates to: GLLSPRLLSRPDLLL*LHRVQETEVHHACL
Trigger: AAGACAGGCATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR GCA 90 bp AAAAATTTCTCATCATCCTGTCAGATGGAACCAGCGTCATTCTCTTaGTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTGGGGAAAC +
Preference number: 1 (lower is better)
Translates to: KNFSSSCQMEPASFS*FTSVLFRCFPSWGN
Trigger: GTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTTCCATCTGACAGGATGATGAGAAATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR TCA 90 bp AAGCTCAAGGCTCCAGATAGAAGAACTGTTTCTCTCAAAGAAATCTaGGATGATTCTGGCCCCCTCCAAACCAAGGTGATTGTTGGAAAT +
Preference number: 1 (lower is better)
Translates to: KLKAPDRRTVSLKEI*DDSGPLQTKVIVGN
Trigger: ATTTCCAACAATCACCTTGGTTTGGAGGGGGCCAGAATCATCTCAGATTTCTTTGAGAGAAACAGTTCTTCTATCTGGAGCCTTGAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR TCA 90 bp CCCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACAGTAGAGTGCCAGGACCCTCTTaGGGGCAGCTGCCAACTTCT +
Preference number: 2 (lower is better)
Translates to: PGLVSLFQQSAGIRPHSRVPGPS*GQLPTS
Trigger: AGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCAC...TCTACTGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR TCA 90 bp AGCCCCTGCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTTGCTCTCCTCCCAGGCCGTGGTGGTTaGGGTTCACGTAGGACTCCT +
Preference number: 2 (lower is better)
Translates to: SPCHSICPSRFQPPLALLPGRGG*GSRRTP
Trigger: AGGAGTCCTACGTGAACCTCAACCACCACGGCCTGG...GAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR GCA 90 bp TCCTCCCTGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTTGTCATTGTCCATGGTaGCAGGACCCTCTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: SSLPPSDLRGLLSPRLLSCHCPW*QDPLEG
Trigger: GCCCTCAAGAGGGTCCTGGCACCATGGACAATGACA...AGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp AGCCCCTGCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTTGCTCTCCTCATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACC +
Preference number: 2 (lower is better)
Translates to: SPCHSICPSRFQPPLALLITSLT*YWFRGT
Trigger: GGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGAT...GAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGCAGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp CGAGATTTCAGCCACCTCTTGCTCTCCTCCCTGCCACCATCCGACTaGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTG +
Preference number: 2 (lower is better)
Translates to: RDFSHLLLSSLPPSD*RGLLSPRLLSRPDL
Trigger: CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGAGAGCAAGAGGTGGCTGAAATCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp CACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACTGACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCC +
Preference number: 2 (lower is better)
Translates to: HHACLLIELLYHLPDLVLTSSCG*TAYTPS
Trigger: GGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGT...CAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR GCA 90 bp GCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCTTGCCACCTCTCGACTaGTTCCCTAAGAAGCACACC +
Preference number: 2 (lower is better)
Translates to: AEEACHCPWCQDPLEGSCLPPLD*FPKKHT
Trigger: GGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAA...GCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR TCA 90 bp GTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGAT +
Preference number: 2 (lower is better)
Translates to: VPVGFKLLKKSTIVILCWPAQIQ*REPHVD
Trigger: ATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGG...CCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp ATTCTCCCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACATCTTCTGTCTCAGGCTaGAGAGGCTTGTCATTGTCC +
Preference number: 2 (lower is better)
Translates to: ILPGWFHFFNSRRGFGLTSSVSG*RGLSLS
Trigger: GGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGA...TGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR TCA 90 bp CTGCGGGTGAACGGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACATTCCAGTCCTTTGCTaGTTTTGGAGGCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: LRVNGIHSVQRFHELLGHIPVLC*FWRPLH
Trigger: ATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAAT...GTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTATTCCAGTCCTTTGCTaGTTTTGGAGGCCCCTTCAT +
Preference number: 2 (lower is better)
Translates to: PETIAQGHSSPCVEVIPAIPVLC*FWRPLH
Trigger: ATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAAT...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp ACCTCCCTGACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTCGTCCAACGTTTTCATaGACTGCTCGGACACCAGCA +
Preference number: 2 (lower is better)
Translates to: TSLTWYWFRGTLFCSIITRPTFS*TARTPA
Trigger: TGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACG...AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGTCTTCTGTCTCAGGCTaGAGAGGCTTGTCATTGTCC +
Preference number: 2 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPSSVSG*RGLSLS
Trigger: GGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGA...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR TCA 90 bp CACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACTGAGACGCCCTCCTCCATaGTGCAATTGTCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: HHACLLIELLYHLPDLVLRRPPP*CNCLPA
Trigger: AGCTGGAAGACAATTGCATCATGGAGGAGGGCGTCT...CAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR GCA 90 bp GAGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCATTGCCGATGTCATTaGCACCGATATCCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: ETGTTPISLQASRYSSFCHCRCH*HRYPGR
Trigger: TCTACCTGGATATCGGTGGCAATGACATCGGCAATG...ACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp GAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTaGAAGTTATTCCAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: ERSSFVRVTLPRRPLHKATAPLV*KLFQLR
Trigger: TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGT...GGCCTTGTGCAATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR-3UTR CCA 90 bp AGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCACAGCTCCCCTTGTGTaGAAGTTATTCCAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: RQALHPSACRPPGTAPFVTAPLV*KLFQLR
Trigger: TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGT...GACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp CTGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAAGAAGATGGTTTTCTTaGGAGAGAGGCCTTGTACTG +
Preference number: 2 (lower is better)
Translates to: LPPSDLRGLLSPRLLSRPRRWFS*ERGLVL
Trigger: CAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCT...TGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp TCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCAAGATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACC +
Preference number: 2 (lower is better)
Translates to: SVQRFHELLGHQHVGNIKITSLT*YWFRGT
Trigger: GGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGAT...CTTGATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp CATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGAACGGCATA +
Preference number: 2 (lower is better)
Translates to: HGVCQQEDGFLGREA*YCLEYHVQLRVNGI
Trigger: TATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCTTGAAGTCATTTCCTaGAAGCTCAAGGCTCCAGAT +
Preference number: 2 (lower is better)
Translates to: PETIAQGHSSPCVEVIPALEVIS*KLKAPD
Trigger: ATCTGGAGCCTTGAGCTTTCAGGAAATGACTTCAAG...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR GCA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCTTGCCACCTCTCGACTaGTTCCCTAAGAAGCACACC +
Preference number: 2 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVLPPLD*FPKKHT
Trigger: GGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAA...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTAGAAGATGGTTTTCTTaGGAGAGAGGCCTTGTACTG +
Preference number: 2 (lower is better)
Translates to: PETIAQGHSSPCVEVIPARRWFS*ERGLVL
Trigger: CAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCT...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp GGCCAGCATCTGGCCCAGGTGCTCCCCTCCTACATCAGAGAATTGGTTGTGACTTTGTCAACAAGAAGATaGTTTTCTTGGGAGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GQHLAQVLPSYIRELVVTLSTRR*FSWERG
Trigger: GCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAA...AGTCACAACCAATTCTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 90 bp AGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTTCTCATCATCCTGTCAGATGGAACC +
Preference number: 2 (lower is better)
Translates to: RHYTHQLAGLQVQLL*SSGEKFLIILSDGT
Trigger: GGTTCCATCTGACAGGATGATGAGAAATTTTTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR TCA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGAGAAGTCCACGATCGTaGTTTTGTGTTGGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPRSPRS*FCVGLH
Trigger: ATGCAGACCAACACAAAATCACGATCGTGGACTTCT...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp AGCCCCTGCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTTGCTCTCCTCCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCCT +
Preference number: 2 (lower is better)
Translates to: SPCHSICPSRFQPPLALLPFVQW*KISHHP
Trigger: AGGATGATGAGAAATTTTTCACCACTGGACAAAAGG...GAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGCAGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR GCA 90 bp CTGAGGCTTTCATTGGATTCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGTTGGCAGAGCAGTGCTaGGGAGTCTTCCTTGAAGTC +
Preference number: 2 (lower is better)
Translates to: LRLSLDSSPLLILEAPSLLAEQC*GVFLEV
Trigger: GACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAA...CAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 90 bp TTCAGAACTCTGAGGCTTTCATTGGATTCCAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGATATCCAGG +
Preference number: 2 (lower is better)
Translates to: FRTLRLSLDSSPLLI*EAPSLPMSLPPISR
Trigger: CCTGGATATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGTTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp CTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTaGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: LWISFMGFVNKKMVF*GERPCTALNTTSSC
Trigger: GCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp TTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTTCAAGAAACTGAAGTTCACCATGCC +
Preference number: 2 (lower is better)
Translates to: LRGLLSPRLLSRPDL*LWLHRVQETEVHHA
Trigger: GGCATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp GATGGCCAGCATCTGGCCCAGGTGCTCCCCTCCTACATCAGAGAATaGGTTGTGACTGAGATCCAGCTTTTTAATTTGGTAATTGGTCGA +
Preference number: 2 (lower is better)
Translates to: DGQHLAQVLPSYIRE*VVTEIQLFNLVIGR
Trigger: TCGACCAATTACCAAATTAAAAAGCTGGATCTCAGTCACAACCAATTCTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCTGGCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 90 bp AGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTTCTCATCATCTTCAATCTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: RHYTHQLAGLQVQLL*SSGEKFLIIFNLQV
Trigger: GACCTGGAGATTGAAGATGATGAGAAATTTTTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557453.5
3UTR-3UTR TCA 90 bp GTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCGGCCTTGTACTGCCTTaGATACCACGTCCAGCTGCG +
Preference number: 2 (lower is better)
Translates to: VFKKLKFTMPVFSSSFFIGLVLP*IPRPAA
Trigger: CGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCC...GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCCCCATCCATATTTATaGGATTCAGGAAAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: PETIAQGHSSPCVEVIPAPHPYL*DSGKAS
Trigger: TGAAGCTTTTCCTGAATCCCATAAATATGGATGGGG...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 90 bp GACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTaGTTGCTATGGCTTCATCGTGTTCAAGAAACTGAAGTTCACCAT +
Preference number: 2 (lower is better)
Translates to: DLRGLLSPRLLSRPD*LLWLHRVQETEVHH
Trigger: ATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp ATTTTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATCTCATCTTCTGTCTCACCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGAT +
Preference number: 2 (lower is better)
Translates to: ILSLLCRTGSISISSSVSPAQIQ*REPHVD
Trigger: ATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGG...TGAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR TCA 90 bp TGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCGTCCAACGTTTTCATaGACTGCTCGGACACCAGCA +
Preference number: 2 (lower is better)
Translates to: CQQEDGFLGREALYCLEYRPTFS*TARTPA
Trigger: TGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACG...GTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR GCA 90 bp CATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGTGGAGGCCCCTTCATTaGCGATGTCATTGCCACCGA +
Preference number: 2 (lower is better)
Translates to: HSSGSVSWGLSTRRWFSWWRPLH*RCHCHR
Trigger: TCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCA...CCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR GCA 90 bp CACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCAGGGGGACCTTGTTTTaGTCTATCATCACTTTCTGG +
Preference number: 2 (lower is better)
Translates to: HSVQRFHELLGHQHVGNIRGTLF*SIITFW
Trigger: CCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCT...GATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR GCA 90 bp TTCATCGTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCAAGCCAGACTTTATTTaGTTGTGCCCAGCCCCTGCC +
Preference number: 2 (lower is better)
Translates to: FIVFKKLKFTMPVFSSSFKPDFI*LCPAPA
Trigger: GGCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTT...GAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACACGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp CACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCCCCTCCAAACCAAGGTaGTTGTTGGAAATATTCATC +
Preference number: 2 (lower is better)
Translates to: HSVQRFHELLGHQHVGNIPSKPR*LLEIFI
Trigger: GATGAATATTTCCAACAATCACCTTGGTTTGGAGGG...GATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAATCCCAAAGCCATTCATaGAGAGATCCAGCTTTGTCA +
Preference number: 2 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLESQSHS*RDPALS
Trigger: TGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGA...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR-3UTR CCA 90 bp CAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGATTCTGGATCAGTTTCATaGGGTTTGTCAACAAGAAGA +
Preference number: 2 (lower is better)
Translates to: QSFADFGGPFIADVIATDSGSVS*GLSTRR
Trigger: TCTTCTTGTTGACAAACCCCATGAAACTGATCCAGA...ATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp CATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGAAAGCTTCAGAACTCTaGGGCTTTCATTGGATTCCA +
Preference number: 2 (lower is better)
Translates to: HCPSGVQALEEVHDRDFVKASEL*GFHWIP
Trigger: TGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTT...CACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR TCA 90 bp GCTCTATCATCACTTTCTGGAACTCATCCACAGACATCTTCATTGTCCCAGTGGAGAAGTCCACGATCGTaGTTTTGTGTTGGTCTGCAT +
Preference number: 2 (lower is better)
Translates to: ALSSLSGTHPQTSSLSQWRSPRS*FCVGLH
Trigger: ATGCAGACCAACACAAAATCACGATCGTGGACTTCT...CCACTGGGACAATGAAGATGTCTGTGGATGAGTTCCAGAAAGTGATGATAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR GCA 90 bp TCAAGCTCTTCCATCCTGGATTTGGGGTTCCTCTTGATAGCCAGGATAAGTAAAAGTGTTCTCTTTCGGTaGTTCCCTTCTTGGGGAAAC +
Preference number: 2 (lower is better)
Translates to: SSSSILDLGFLLIARISKSVLFR*FPSWGN
Trigger: GTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACT...TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATCCAGGATGGAAGAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CCA 90 bp TGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCGGACACCAGCACGTTaGAAATATCAAGCTCTTCCA +
Preference number: 2 (lower is better)
Translates to: CQQEDGFLGREALYCLEYRTPAR*KYQALP
Trigger: TGGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCG...GTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCTCTGGATCAGTTTCATaGGGTTTGTCAACAAGAAGA +
Preference number: 2 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVSGSVS*GLSTRR
Trigger: TCTTCTTGTTGACAAACCCCATGAAACTGATCCAGA...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp AACCAGCGTCATTCTCTTGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGT +
Preference number: 2 (lower is better)
Translates to: NQRHSLASQVFSFGASLLRILPG*FHFFNS
Trigger: ACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG...AAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 90 bp GAAAAATTTCTCATCATCCTGTCAGATGGAACCAGCGTCATTCTCTaGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: EKFLIILSDGTSVIL*LHKCSLSVLPFLGK
Trigger: TTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTTCCATCTGACAGGATGATGAGAAATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR GCA 90 bp CTGCATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTCATTGCCGATGTCATTaGCACCGATATCCAGGTAGA +
Preference number: 2 (lower is better)
Translates to: LHSSGSVSWGLSTRRWFSHCRCH*HRYPGR
Trigger: TCTACCTGGATATCGGTGGCAATGACATCGGCAATG...AGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CCA 90 bp CATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGCCCCATCCATATTTATaGGATTCAGGAAAAGCTTCA +
Preference number: 2 (lower is better)
Translates to: HCPSGVQALEEVHDRDFVPHPYL*DSGKAS
Trigger: TGAAGCTTTTCCTGAATCCCATAAATATGGATGGGG...CACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGGACGTGAGCCCCACGTaGATGGCCAGCATCTGGCCC +
Preference number: 3 (lower is better)
Translates to: ADVIATDIQVDQAAVESEDVSPT*MASIWP
Trigger: GGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTC...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp CATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCTAGGGCCAGAGCCACCT +
Preference number: 3 (lower is better)
Translates to: HCHRYPGRPGSG*VGGLPLGPEPP
Trigger: AGGTGGCTCTGGCCCTAGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR-3UTR CAA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGTTACCCCGGAGACCATaGCACAAGGCCACAGCTCCC +
Preference number: 3 (lower is better)
Translates to: ADVIATDIQVDQAAVESELPRRP*HKATAP
Trigger: GGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAA...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR GCA 72 bp GCCACCTCTTGCTCTCCTCCCTGCCACCATCCGACTTaGGAGGACTCCTCTCGCCGAGACTTCTTTCTAGAC +
Preference number: 3 (lower is better)
Translates to: ATSCSPPCHHPT*EDSSRRDFFLD
Trigger: GTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGAGAGCAAGAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ACCTCCCTGACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTGACGTGAGCCCCACGTaGATGGCCAGCATCTGGCCC +
Preference number: 3 (lower is better)
Translates to: TSLTWYWFRGTLFCSIITDVSPT*MASIWP
Trigger: GGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTC...AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp CATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCCGGAGACCATTGCACAA +
Preference number: 3 (lower is better)
Translates to: HCHRYPGRPGSG*VGGLPPETIAQ
Trigger: TTGTGCAATGGTCTCCGGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CAA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGC +
Preference number: 3 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQRPQLP*CGSYSS
Trigger: GCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCT...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGC +
Preference number: 3 (lower is better)
Translates to: GTTPISLQASRYSSFCPVRPQLP*CGSYSS
Trigger: GCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCT...CACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CAA 90 bp AGCCCCTGCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTTGCTCTCCTCAGGCCTTGTACTGCCTaGAATACCACGTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SPCHSICPSRFQPPLALLRPCTA*NTTSSC
Trigger: GCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCT...GAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp TCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGATGGCCAGCATCTGGCC +
Preference number: 3 (lower is better)
Translates to: SPCVEVIPAQIQ*REPHVDGQHLA
Trigger: GGCCAGATGCTGGCCATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCG +
Preference number: 3 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQSPLLI*EAPSLP
Trigger: CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACT...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp AGCCCCTGCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTTGCTCTCCTCCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCAC +
Preference number: 3 (lower is better)
Translates to: SPCHSICPSRFQPPLALLLGREA*YCLEYH
Trigger: GTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAG...GAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGCAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp CAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGATATTGGTCGACAGGGCTaGGCAGAGCAGTGCTGCGGA +
Preference number: 3 (lower is better)
Translates to: QSFADFGGPFIADVIATDIGRQG*AEQCCG
Trigger: TCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAAT...ATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR GCA 72 bp CTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTaGCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTT +
Preference number: 3 (lower is better)
Translates to: LSQAEEACHCPW*QDPLEGSCQLL
Trigger: AAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR CCA 72 bp CTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATaGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTT +
Preference number: 3 (lower is better)
Translates to: LLSQAEEACHCP*CQDPLEGSCQL
Trigger: AAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR GCA 72 bp CAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTaGCTTGAATACCACGTCCAGCTGCGGGTGAACGGC +
Preference number: 3 (lower is better)
Translates to: QEDGFLGREALY*LEYHVQLRVNG
Trigger: GCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 72 bp CTAGGGCCAGAGCCACCTCATTCCCAAAGCCATTCATaGAGAGATCCAGCTTTGTCAGGGTCACATTACCCC +
Preference number: 3 (lower is better)
Translates to: LGPEPPHSQSHS*RDPALSGSHYP
Trigger: GGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGAATGAGGTGGCTCTGGCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR TCA 72 bp CCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCCAACGTTTTCATGAAC +
Preference number: 3 (lower is better)
Translates to: PCTALNTTSSCG*TAYTPSNVFMN
Trigger: GTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp AGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTaGATACCACGTCCAGCTGCGGGTGAACGGCATACA +
Preference number: 3 (lower is better)
Translates to: RWFSWERGLVLP*IPRPAAGERHT
Trigger: TGTATGCCGTTCACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 72 bp TTCAATCTCCAGGTCTGTTTCCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGC +
Preference number: 3 (lower is better)
Translates to: FNLQVCFRILPG*FHFFNSRRGFG
Trigger: GCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCGGAAACAGACCTGGAGATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR CAA 90 bp ATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATTTGGAGGCCCCTTCATaGCCGATGTCATTGCCACCG +
Preference number: 3 (lower is better)
Translates to: IHSVQRFHELLGHQHVGNLEAPS*PMSLPP
Trigger: CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAA...ATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GCTCAATTTCAATCTCATCTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCAGGTGCCAGGACCCTCTaGAGGGCAGCTGCCAACTTC +
Preference number: 3 (lower is better)
Translates to: AQFQSHLLSQAEEACHCPGARTL*RAAANF
Trigger: GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACC...TGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGATGAGATTGAAATTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR CAA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGGATTTGGGGTTCCTCTaGATAGCCAGGATAAGTAAA +
Preference number: 3 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQDLGFL*IARISK
Trigger: TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATC...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTACTACACCCATCAGCTaGCAGGCCTCCAGGTACAGC +
Preference number: 3 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCTTPIS*QASRYS
Trigger: GCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGT...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR TCA 72 bp GCGGGTGAACGGCATACACTCCGTCCAACGTTTTCATaGACTGCTCGGACACCAGCACGTTGGAAATATCAA +
Preference number: 3 (lower is better)
Translates to: AGERHTLRPTFS*TARTPARWKYQ
Trigger: TTGATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp TGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTaGCCTGGTACTGGTTCAGGGGGACCTTGTTTTGCT +
Preference number: 3 (lower is better)
Translates to: CLSSHRASLSPP*PGTGSGGPCFA
Trigger: AGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ACCTCCCTGACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTACTCTGAGGCTTTCATaGGATTCCAGTCCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: TSLTWYWFRGTLFCSIITTLRLS*DSSPLL
Trigger: CAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGT...AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp ACTGGCTCAATTTCAATCTCATCTTCTGTCTCAGGCTaGAGAGGCTTGTCATTGTCCATGGTGCCAGGACCC +
Preference number: 3 (lower is better)
Translates to: TGSISISSSVSG*RGLSLSMVPGP
Trigger: GGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGATGAGATTGAAATTGAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR CCA 72 bp GTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATC +
Preference number: 3 (lower is better)
Translates to: VFSSSFFITSLT*YWFRGTLFCSI
Trigger: GATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCG +
Preference number: 3 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCSPLLI*EAPSLP
Trigger: CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACT...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATCAAGCCAGACTTTATTaGCTTGTGCCCAGCCCCTGC +
Preference number: 3 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHQARLY*LVPSPC
Trigger: GCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTTG...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp CTTGTTTTGCTCTATCATCACTTTCTGGAACTCATCCACAGACATCTTCATTGTGGTGCCAGGACCCTCTaGAGGGCAGCTGCCAACTTC +
Preference number: 3 (lower is better)
Translates to: LVLLYHHFLELIHRHLHCGARTL*RAAANF
Trigger: GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACC...ACAATGAAGATGTCTGTGGATGAGTTCCAGAAAGTGATGATAGAGCAAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR TCA 72 bp TGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCCTGTCAGATGGAACCAG +
Preference number: 3 (lower is better)
Translates to: CRPPGTAPFVQW*KISHHPVRWNQ
Trigger: CTGGTTCCATCTGACAGGATGATGAGAAATTTTTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CAA 90 bp CAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTTGGATTCCAGTCCTTaGCTGATTTTGGAGGCCCCT +
Preference number: 3 (lower is better)
Translates to: QFHGVCQQEDGFLGREALLDSSP*LILEAP
Trigger: AGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAA...CAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATGTGGGGTTCAAGCTCTaGAAGAAGTCCACGATCGTG +
Preference number: 3 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHVGFKL*KKSTIV
Trigger: CACGATCGTGGACTTCTTCAAGAGCTTGAACCCCAC...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATCAGGGGGACCTTGTTTaGCTCTATCATCACTTTCTG +
Preference number: 3 (lower is better)
Translates to: IHSVQRFHELLGHQHVGNQGDLV*LYHHFL
Trigger: CAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTG...ATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCTCGGTGCTTCCCTTCTaGGGGAAACTTCAATCTCCA +
Preference number: 3 (lower is better)
Translates to: VNKKMVFLGERPCTALNTSVLPF*GKLQSP
Trigger: TGGAGATTGAAGTTTCCCCAAGAAGGGAAGCACCGA...GGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR-3UTR CAA 90 bp AATAGCCCCATCCATATTTATGGGATTCAGGAAAAGCTTCAGAACTCTGAGGCTTGGAGAGATCCAGCTTaGTCAGGGTCACATTACCCC +
Preference number: 3 (lower is better)
Translates to: NSPIHIYGIQEKLQNSEAWRDPA*SGSHYP
Trigger: GGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCA...AGCCTCAGAGTTCTGAAGCTTTTCCTGAATCCCATAAATATGGATGGGGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR-3UTR CAA 90 bp GTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGGATTTGGGGTTCCTCTaGATAGCCAGGATAAGTAAA +
Preference number: 3 (lower is better)
Translates to: VPVGFKLLKKSTIVILCWDLGFL*IARISK
Trigger: TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATC...CCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp ATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATTCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTT +
Preference number: 3 (lower is better)
Translates to: IHSVQRFHELLGHQHVGNSRPDL*LWLHRV
Trigger: AACACGATGAAGCCATAGCAACAAGTCTGGTCTAGA...ATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATGCTGCGGAGTCTTCCTaGAAGTCATTTCCTGAAAGC +
Preference number: 3 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHAAESS*KSFPES
Trigger: GCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAGC...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR TCA 72 bp TGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCTTCAATCTCCAGGTCTG +
Preference number: 3 (lower is better)
Translates to: CRPPGTAPFVQW*KISHHLQSPGL
Trigger: CAGACCTGGAGATTGAAGATGATGAGAAATTTTTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557453.5
3UTR-3UTR CAA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATACTCTGAGGCTTTCATaGGATTCCAGTCCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHTLRLS*DSSPLL
Trigger: CAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGT...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR-3UTR CAA 90 bp TGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTT +
Preference number: 3 (lower is better)
Translates to: CPSGVQALEEVHDRDFVLQVQLL*SSGEKF
Trigger: AAATTTTTCACCACTGGACAAAAGGAGCTGTACCTG...CAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR GCA 72 bp TCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTaGTATGGCTTCATCGTGTTCAAGAAACTGAAGTTC +
Preference number: 3 (lower is better)
Translates to: SSRRDFFLDQTC*YGFIVFKKLKF
Trigger: GAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CCA 72 bp CTCACAGTAGAGCATTTTATCGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATCTTCTGTCTCAGGCTG +
Preference number: 3 (lower is better)
Translates to: LTVEHFIAALSY*LNFNLIFCLRL
Trigger: CAGCCTGAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
3UTR-3UTR CAA 90 bp TGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGTCAGTTTCATGGGGTTaGTCAACAAGAAGATGGTTT +
Preference number: 3 (lower is better)
Translates to: CPSGVQALEEVHDRDFVLSVSWG*STRRWF
Trigger: AAACCATCTTCTTGTTGACAAACCCCATGAAACTGA...CAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR TCA 72 bp GCTCCAGATAGAAGAACTGTTTCTCTCAAAGAAATCTaGGATGATTCTGGCCCCCTCCAAACCAAGGTGATT +
Preference number: 3 (lower is better)
Translates to: APDRRTVSLKEI*DDSGPLQTKVI
Trigger: AATCACCTTGGTTTGGAGGGGGCCAGAATCATCTCAGATTTCTTTGAGAGAAACAGTTCTTCTATCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACAGTAGAGAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCCG +
Preference number: 4 (lower is better)
Translates to: PGWFHFFNSRRGFGLTVERPGSG*VGGLPP
Trigger: CGGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCT...CTCTACTGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 72 bp ACAGCCATGTTGGACACCAGGGCTATAGCAATAGCCTaGGTACCCCTGGGGCCCAGGCCGTGGTGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: TAMLDTRAIAIA*VPLGPRPWWLR
Trigger: CCTCAACCACCACGGCCTGGGCCCCAGGGGTACCAAGGCTATTGCTATAGCCCTGGTGTCCAACATGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CCCCTTCATTGCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGCTGGGAGCCCTGTTaGAAGGATCCCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: PLHCRCHCHRYPGRPGSGCWEPC*KDPHPP
Trigger: AGGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCA...ACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGCAATGAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGTGCTGGGAGCCCTGTTaGAAGGATCCCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: ALHPSACRPPGTAPFVQWCWEPC*KDPHPP
Trigger: AGGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCA...CCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR TCA 90 bp CCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACAGTAGAGACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCC +
Preference number: 4 (lower is better)
Translates to: PGWFHFFNSRRGFGLTVETSSCG*TAYTPS
Trigger: GGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGT...CTCTACTGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGCTGGGAGCCCTGTTaGAAGGATCCCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLCWEPC*KDPHPP
Trigger: AGGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCC +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLTSSCG*TAYTPS
Trigger: GGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCCAGGCCGTGGTGGTTaGGGTTCACGTAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLPGRGG*GSRRTP
Trigger: AGGAGTCCTACGTGAACCTCAACCACCACGGCCTGG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GGCCAGCATCTGGCCCAGGTGCTCCCCTCCTACATCAGAGAATTGGTTGTGACTCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGAT +
Preference number: 4 (lower is better)
Translates to: GQHLAQVLPSYIRELVVTPAQIQ*REPHVD
Trigger: ATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGG...AGTCACAACCAATTCTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: RRPLHKATAPLVWKLFQLRPGSG*VGGLPL
Trigger: TAGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCT...GAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp GCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACGTGAGCCCCACGGGCCTTGTACTGCCTTaGATACCACGTCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: APLVWKLFQLRSSDVSPTGLVLP*IPRPAA
Trigger: CGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCC...CGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp AGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RLVIVHGARTLLRAAANFLGEWD*SIAGSP
Trigger: AGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAG...GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp GGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GTTPISLQASRYSSFCPVLGEWD*SIAGSP
Trigger: AGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAG...CACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp GCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACGTGAGCCCCACGCATCCCAGGGGAGCCTaGAGTTATCCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: APLVWKLFQLRSSDVSPTHPRGA*SYPSLP
Trigger: TGGGAGGGAAGGATAACTGCAGGCTCCCCTGGGATG...CGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGTGTCATTGTCCATGGTaGCAGGACCCTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ADVIATDIQVDQAAVESECHCPW*QDPLEG
Trigger: GCCCTCAAGAGGGTCCTGGCACCATGGACAATGACA...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CCA 90 bp CTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCGCTCATCTGGGAGAGTaGGACTGCTCTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LKRLVIVHGARTLLRAAAAHLGE*DCSIAG
Trigger: CCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGC...GGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp GCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: ALHPSACRPPGTAPFVQWITSLT*YWFRGT
Trigger: GGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGAT...CCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 72 bp AGCCACCTCTTGCTCTCCTCCCTGCCACCATCCGACTaGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SHLLLSSLPPSD*RGLLSPRLLSR
Trigger: TCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGAGAGCAAGAGGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 72 bp GCCACAGCATCTGTCCATCGAGATTTCAGCCACCTCTaGCTCTCCTCCCTGCCACCATCCGACTTGCGAGGA +
Preference number: 4 (lower is better)
Translates to: ATASVHRDFSHL*LSSLPPSDLRG
Trigger: TCCTCGCAAGTCGGATGGTGGCAGGGAGGAGAGCAAGAGGTGGCTGAAATCTCGATGGACAGATGCTGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGAT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLPAQIQ*REPHVD
Trigger: ATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGAGACCAGGCAGCGGTTaGGTCGGAGGACTTCCCCTA +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLRPGSG*VGGLPL
Trigger: TAGGGGAAGTCCTCCGACTCAACCGCTGCCTGGTCT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR GCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCATCCCAGGGGAGCCTaGAGTTATCCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLHPRGA*SYPSLP
Trigger: TGGGAGGGAAGGATAACTGCAGGCTCCCCTGGGATG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTTGCATCCCAGGGGAGCCTaGAGTTATCCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LVIVHGARTLLRAAANFLHPRGA*SYPSLP
Trigger: TGGGAGGGAAGGATAACTGCAGGCTCCCCTGGGATG...CAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp CCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACAGTAGAGTGTCATTGTCCATGGTaGCAGGACCCTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: PGWFHFFNSRRGFGLTVECHCPW*QDPLEG
Trigger: GCCCTCAAGAGGGTCCTGGCACCATGGACAATGACA...CTCTACTGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp AGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCGCTCATCTGGGAGAGTaGGACTGCTCTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RLVIVHGARTLLRAAANFAHLGE*DCSIAG
Trigger: CCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGC...GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTTGATGGCCAGCATCTaGCCCAGGTGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCLMASI*PRCSPP
Trigger: AGGAGGGGAGCACCTGGGCCAGATGCTGGCCATCAA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
3UTR CAA 72 bp TCCCCCGGAGACCATTGCACAAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACG +
Preference number: 4 (lower is better)
Translates to: SPGDHCTRPQLP*CGSYSSSDPVT
Trigger: CGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp GAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGTGCTGGGAGCCCTGTTaGAAGGATCCCCACCCGCCT +
Preference number: 4 (lower is better)
Translates to: EVHHACLLIELLYHLPDLCWEPC*KDPHPP
Trigger: AGGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCA...CAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CTTTGTCAGGGTCACATTACCCCGGAGACCATTGCACAAGGCCACAGCTCCCCTAGACGCCCTCCTCCATaGTGCAATTGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCQGHITPETIAQGHSSPRRPPP*CNCLPA
Trigger: AGCTGGAAGACAATTGCATCATGGAGGAGGGCGTCT...AGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAATGTGACCCTGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGGCCTTGTACTGCCTTaGATACCACGTCCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCGLVLP*IPRPAA
Trigger: CGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCC...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLLGEWD*SIAGSP
Trigger: AGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAG...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCTACACCCATCAGCTTaGAGGCCTCCAGGTACAGCT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLLHPSA*RPPGTA
Trigger: AGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GAGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCTACACCCATCAGCTTaGAGGCCTCCAGGTACAGCT +
Preference number: 4 (lower is better)
Translates to: ETGTTPISLQASRYSSFCLHPSA*RPPGTA
Trigger: AGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAG...ACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTAGCATCTGGCCCAGGTaGTCCCCTCCTACATCAGAG +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSIWPR*SPPTSE
Trigger: CTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCTGGAGGCCCCTTCATTaGCGATGTCATTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: RRPLHKATAPLVWKLFQLWRPLH*RCHCHR
Trigger: TCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCA...GAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGGAGGCCCCTTCATTaGCGATGTCATTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLWRPLH*RCHCHR
Trigger: TCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TCCTCCCTGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGAGAGGCCTTGTACTaGCTTGAATACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLPPSDLRGLLSPRLLSREALY*LEYHVQ
Trigger: CTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCT...AGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CCAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGATGCCACCATCCGACTTaGGAGGACTCCTCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: PKPFMERSSFVRVTLPRRCHHPT*EDSSRR
Trigger: TCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA...TCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR GCA 90 bp AGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTTTGCCACCTCTCGACTaGTTCCCTAAGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: RLKRLVIVHGARTLLRAALPPLD*FPKKHT
Trigger: GGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAA...AGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLITSLT*YWFRGT
Trigger: GGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGAT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
3UTR CAA 72 bp TACCCCGGAGACCATTGCACAAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACG +
Preference number: 4 (lower is better)
Translates to: YPGDHCTRPQLP*CGSYSSSDPVT
Trigger: CGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp CATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATTGCCCAGCTCAGATCCAGTaGCGTGAGCCCCACGTTGAT +
Preference number: 4 (lower is better)
Translates to: HSWRDPALSGSHYPGDHCPAQIQ*REPHVD
Trigger: ATCAACGTGGGGCTCACGTCACTGGATCTGAGCTGG...GCAATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp CTGCGGGTGAACGGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCGTCCAACGTTTTCATaGACTGCTCGGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: LRVNGIHSVQRFHELLGHRPTFS*TARTPA
Trigger: TGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACG...GTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCGTCCAACGTTTTCATaGACTGCTCGGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLRPTFS*TARTPA
Trigger: TGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp ATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCACGTCCAGCTGCGGGTaGACGGCATACACTCCGTCC +
Preference number: 4 (lower is better)
Translates to: MGFVNKKMVFLGERPCTATSSCG*TAYTPS
Trigger: GGACGGAGTGTATGCCGTTCACCCGCAGCTGGACGT...GGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TCCTCCCTGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTCAAAGAAATCTGAGATaGTTCTGGCCCCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSLPPSDLRGLLSPRLLSQRNLR*FWPPPN
Trigger: GTTTGGAGGGGGCCAGAATCATCTCAGATTTCTTTG...AGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTCTGTCTCAAACTCTGTaGACTTCCCTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLSQAEEACHCPWCQDPLLSQTL*TSLTWG
Trigger: CCCCCAGGTGAGGGAAGTTCACAGAGTTTGAGACAG...AAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR TCA 90 bp AGGCTTTCATTGGATTCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGGTGCCAGGACCCTCTTaGGGGCAGCTGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: RLSLDSSPLLILEAPSLPVPGPS*GQLPTS
Trigger: AGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCAC...CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp GCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGTCTTCTGTCTCAGGCTaGAGAGGCTTGTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: ALHPSACRPPGTAPFVQWSSVSG*RGLSLS
Trigger: GGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGA...CCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp AGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATCATCCCAGGGGAGCCTaGAGTTATCCTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SHSWRDPALSGSHYPGDHHPRGA*SYPSLP
Trigger: TGGGAGGGAAGGATAACTGCAGGCTCCCCTGGGATG...ATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR GCA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGCTACACCCATCAGCTTaGAGGCCTCCAGGTACAGCT +
Preference number: 4 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPLHPSA*RPPGTA
Trigger: AGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAG...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGGCTTGGCAGAGCAGTaGTGCGGAGTCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCGLAEQ*CGVFLE
Trigger: TTCAAGGAAGACTCCGCAGCACTGCTCTGCCAAGCC...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGAGAGAGGCCTTGTACTaGCTTGAATACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQREALY*LEYHVQ
Trigger: CTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCT...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGTGCCACCATCCGACTTaGGAGGACTCCTCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: EVHHACLLIELLYHLPDLCHHPT*EDSSRR
Trigger: TCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA...CAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGTTGCCACCTCTCGACTaGTTCCCTAAGAAGCACACC +
Preference number: 4 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRLPPLD*FPKKHT
Trigger: GGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAA...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp GGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAGCTCATCTGGGAGAGTaGGACTGCTCTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GIHSVQRFHELLGHQHVGAHLGE*DCSIAG
Trigger: CCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGC...TCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGCTCATCTGGGAGAGTaGGACTGCTCTATTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLAHLGE*DCSIAG
Trigger: CCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGC...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGAATTTCAATCTCATCTaGGGGCATCCCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FLGREALYCLEYHVQLRVNFNLI*GHPRGA
Trigger: GGCTCCCCTGGGATGCCCCCAGATGAGATTGAAATT...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGAATTTCAATCTCATCTaGGGGCATCCCAGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLNFNLI*GHPRGA
Trigger: GGCTCCCCTGGGATGCCCCCAGATGAGATTGAAATT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCCCTGACCTGGTACTaGTTCAGGGGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLSLTWY*FRGTLF
Trigger: AAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp AGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATATCACCTCCCTGACCTaGTACTGGTTCAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: SHSWRDPALSGSHYPGDHITSLT*YWFRGT
Trigger: GGTCCCCCTGAACCAGTACCAGGTCAGGGAGGTGAT...ATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTAGACGCCCTCCTCCATaGTGCAATTGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCRRPPP*CNCLPA
Trigger: AGCTGGAAGACAATTGCATCATGGAGGAGGGCGTCT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTCTTTATCACCTCCCTaGCCTGGTACTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLSLSPP*PGTGSG
Trigger: CCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp AAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KMVFLGERPCTALNTTSSLGEWD*SIAGSP
Trigger: AGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAG...GCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTTGGCAGAGCAGTGCTaGGGAGTCTTCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLLAEQC*GVFLEV
Trigger: GACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CCAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGAGGCTTGGCAGAGCAGTaGTGCGGAGTCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PKPFMERSSFVRVTLPRRGLAEQ*CGVFLE
Trigger: TTCAAGGAAGACTCCGCAGCACTGCTCTGCCAAGCC...TCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR GCA 90 bp AAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCAGCATCTGGCCCAGGTaGTCCCCTCCTACATCAGAG +
Preference number: 4 (lower is better)
Translates to: KMVFLGERPCTALNTTSSSIWPR*SPPTSE
Trigger: CTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCT...GCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGAGCATCTGGCCCAGGTaGTCCCCTCCTACATCAGAG +
Preference number: 4 (lower is better)
Translates to: VPVGFKLLKKSTIVILCWSIWPR*SPPTSE
Trigger: CTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCT...CCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACAGCTCCCCTTGTGTaGAAGTTATTCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQTAPLV*KLFQLR
Trigger: TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGT...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CCCCTTCATTGCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTCGGACACCAGCACGTTaGAAATATCAAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLHCRCHCHRYPGRPGSGRTPAR*KYQALP
Trigger: TGGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCG...ACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGCAATGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGTCCCTGACCTGGTACTaGTTCAGGGGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPSLTWY*FRGTLF
Trigger: AAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGA...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGCCTCCATGTTCCGAATaGAGTAGGAGACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLPPCSE*SRRQAL
Trigger: TAGTGCCTGTCTCCTACTTCATTCGGAACATGGAGG...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGATTCCAGTCCTTTGCTaGTTTTGGAGGCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLIPVLC*FWRPLH
Trigger: ATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAAT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGATTCCAGTCCTTTGCTaGTTTTGGAGGCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRIPVLC*FWRPLH
Trigger: ATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAAT...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCAAAGAAATCTGAGATaGTTCTGGCCCCCTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLQRNLR*FWPPPN
Trigger: GTTTGGAGGGGGCCAGAATCATCTCAGATTTCTTTG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCTCTCAAAGAAATCTaGGATGATTCTGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLSLKEI*DDSGPL
Trigger: GAGGGGGCCAGAATCATCTCAGATTTCTTTGAGAGA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCTGCGGAGTCTTCCTTaGAGTCATTTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLLRSLP*SHFLKA
Trigger: AGCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTTGCTGCGGAGTCTTCCTTaGAGTCATTTCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LVIVHGARTLLRAAANFLLRSLP*SHFLKA
Trigger: AGCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAG...CAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp GGCCTCACAGTAGAGCATTTTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATGTGCCAGGACCCTCTTaGGGGCAGCTGCCAACTTCT +
Preference number: 4 (lower is better)
Translates to: GLTVEHFIAALSYWLNFNVPGPS*GQLPTS
Trigger: AGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCAC...ATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTGTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp GTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTGGAGGCCCCTTCATTaGCGATGTCATTGCCACCGA +
Preference number: 4 (lower is better)
Translates to: VPVGFKLLKKSTIVILCWWRPLH*RCHCHR
Trigger: TCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCA...CCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGAGAGAGGCCTTGTACTaGCTTGAATACCACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLREALY*LEYHVQ
Trigger: CTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GAGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTAGTGTTCTCTTTCGGTaGTTCCCTTCTTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: ETGTTPISLQASRYSSFCSVLFR*FPSWGN
Trigger: GTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACT...ACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CCA 90 bp GCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACGTGAGCCCCACGGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATC +
Preference number: 4 (lower is better)
Translates to: APLVWKLFQLRSSDVSPTAALSY*LNFNLI
Trigger: GATGAGATTGAAATTGAGCCAGTACGACAGAGCAGC...CGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGACAGCTCCCCTTGTGTaGAAGTTATTCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLTAPLV*KLFQLR
Trigger: TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTTGCGGACACCAGCACGTTaGAAATATCAAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVIVHGARTLLRAAANFLRTPAR*KYQALP
Trigger: TGGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCG...CAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGGGAAGAGTAGGCTTTaGTGGGAATTGGATGTGCAT +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCGKSRL*WELDVH
Trigger: ATGCACATCCAATTCCCATCAAAGCCTACTCTTCCC...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACTGCTGCGGAGTCTTCCTTaGAGTCATTTCCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: HHACLLIELLYHLPDLVLLRSLP*SHFHLL
Trigger: CAGGAGATGGAAATGACTTCAAGGAAGACTCCGCAG...CAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGAGAAGTCCACGATCGTaGTTTTGTGTTGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLRSPRS*FCVGLH
Trigger: ATGCAGACCAACACAAAATCACGATCGTGGACTTCT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCTTGAAGTCATTTCCTaGAAGCTCAAGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLLEVIS*KLKAPD
Trigger: ATCTGGAGCCTTGAGCTTTCAGGAAATGACTTCAAG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAACTGTCTCAAACTCTGTaGACTTCCCTCACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLELSQTL*TSLTWG
Trigger: CCCCCAGGTGAGGGAAGTTCACAGAGTTTGAGACAG...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR GCA 90 bp TGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGCTACACCCATCAGCTTaGAGGCCTCCAGGTACAGCT +
Preference number: 4 (lower is better)
Translates to: CPSGVQALEEVHDRDFVLLHPSA*RPPGTA
Trigger: AGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAG...CAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCATTGCCGATGTCATTaGCACCGATATCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCHCRCH*HRYPGR
Trigger: TCTACCTGGATATCGGTGGCAATGACATCGGCAATG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACAAGCCAGACTTTATTTaGTTGTGCCCAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FTMPVFSSSFFITSLTWYKPDFI*LCPAPA
Trigger: GGCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTT...GTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp GCTGCCAACTTCTTGCCACCTCTCGACTGCTTCCCTAAGAAGCACACCTGTCCAGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATC +
Preference number: 4 (lower is better)
Translates to: AANFLPPLDCFPKKHTCPAALSY*LNFNLI
Trigger: GATGAGATTGAAATTGAGCCAGTACGACAGAGCAGC...TGGACAGGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAAGAAGTTGGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLRILPG*FHFFNS
Trigger: ACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: RRPLHKATAPLVWKLFQLRILPG*FHFFNS
Trigger: ACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG...GAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRRILPG*FHFFNS
Trigger: ACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CCA 90 bp GGGATTCAGGAAAAGCTTCAGAACTCTGAGGCTTTCATTGGATTCCAGTCCTTTTTGATGGCCAGCATCTaGCCCAGGTGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GIQEKLQNSEAFIGFQSFLMASI*PRCSPP
Trigger: AGGAGGGGAGCACCTGGGCCAGATGCTGGCCATCAA...AAAGGACTGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTTTCCTGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCGGACACCAGCACGTTaGAAATATCAAGCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCRTPAR*KYQALP
Trigger: TGGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGAGAAGATGGTTTTCTTaGGAGAGAGGCCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLRRWFS*ERGLVL
Trigger: CAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp GCCCAGGCCGTGGTGGTTGAGGTTCACGTAGGACTCCTCCATGTTCCGAATGAACCAGACTTGTTGCTATaGCTTCATCGTGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: AQAVVVEVHVGLLHVPNEPDLLL*LHRVQE
Trigger: TTCTTGAACACGATGAAGCCATAGCAACAAGTCTGG...TTCATTCGGAACATGGAGGAGTCCTACGTGAACCTCAACCACCACGGCCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 72 bp CCTCATTCCCAAAGCCATTCATGGAGAGATCCAGCTTaGTCAGGGTCACATTACCCCGGAGACCATTGCACA +
Preference number: 4 (lower is better)
Translates to: PHSQSHSWRDPA*SGSHYPGDHCT
Trigger: TGTGCAATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGAATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR CAA 72 bp CTGAGGCTTTCATTGGATTCCAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCGATGTCATTGCCACCG +
Preference number: 4 (lower is better)
Translates to: LRLSLDSSPLLI*EAPSLPMSLPP
Trigger: CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 72 bp TGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCACGTCCAGCTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: CQQEDGFLGREA*YCLEYHVQLRV
Trigger: CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCCCTCCATGTTCCGAATaGAGTAGGAGACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVPPCSE*SRRQAL
Trigger: TAGTGCCTGTCTCCTACTTCATTCGGAACATGGAGG...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CTGCATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTCCAGGCCGTGGTGGTTaGGGTTCACGTAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LHSSGSVSWGLSTRRWFSPGRGG*GSRRTP
Trigger: AGGAGTCCTACGTGAACCTCAACCACCACGGCCTGG...AGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACGTGAGCCCCACGTCAGAGAATTGGTTGTaGCTGAGATCCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: APLVWKLFQLRSSDVSPTSENWL*LRSSFL
Trigger: TAAAAAGCTGGATCTCAGTCACAACCAATTCTCTGA...CGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGCCCTCCAAACCAAGGTaGTTGTTGGAAATATTCATC +
Preference number: 4 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRPSKPR*LLEIFI
Trigger: GATGAATATTTCCAACAATCACCTTGGTTTGGAGGG...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGCTTGAAGTCATTTCCTaGAAGCTCAAGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPLEVIS*KLKAPD
Trigger: ATCTGGAGCCTTGAGCTTTCAGGAAATGACTTCAAG...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR GCA 90 bp CAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATTGCCGATGTCATTaGCACCGATATCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: QSHSWRDPALSGSHYPGDHCRCH*HRYPGR
Trigger: TCTACCTGGATATCGGTGGCAATGACATCGGCAATG...GTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR GCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTAGGGGGACCTTGTTTTaGTCTATCATCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCRGTLF*SIITFW
Trigger: CCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTGGCTTTGATGGGAATTaGATGTGCATGAATTTGACC +
Preference number: 4 (lower is better)
Translates to: PETIAQGHSSPCVEVIPAGFDGN*MCMNLT
Trigger: GGTCAAATTCATGCACATCCAATTCCCATCAAAGCC...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp GGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATC +
Preference number: 4 (lower is better)
Translates to: GIHSVQRFHELLGHQHVGAALSY*LNFNLI
Trigger: GATGAGATTGAAATTGAGCCAGTACGACAGAGCAGC...TCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATC +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCAALSY*LNFNLI
Trigger: GATGAGATTGAAATTGAGCCAGTACGACAGAGCAGC...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTCCCAAAGCCATTCATaGAGAGATCCAGCTTTGTCA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSQSHS*RDPALS
Trigger: TGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTCAACAAGAAGATaGTTTTCTTGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLLSTRR*FSWERG
Trigger: GCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp ATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATTCCCTGACCTGGTACTaGTTCAGGGGGACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: IHSVQRFHELLGHQHVGNSLTWY*FRGTLF
Trigger: AAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGA...ATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCCAGACTTGTTGCTATaGCTTCATCGTGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLPDLLL*LHRVQE
Trigger: TTCTTGAACACGATGAAGCCATAGCAACAAGTCTGG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp ATTTTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATCTCATCTTCTGTCTCACCAGGCCGTGGTGGTTaGGGTTCACGTAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ILSLLCRTGSISISSSVSPGRGG*GSRRTP
Trigger: AGGAGTCCTACGTGAACCTCAACCACCACGGCCTGG...TGAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTAAAGCTTCAGAACTCTaGGGCTTTCATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCKASEL*GFHWIP
Trigger: TGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCCCTCCAAACCAAGGTaGTTGTTGGAAATATTCATC +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCPSKPR*LLEIFI
Trigger: GATGAATATTTCCAACAATCACCTTGGTTTGGAGGG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCTCTCTCAAAGAAATCTaGGATGATTCTGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVSLKEI*DDSGPL
Trigger: GAGGGGGCCAGAATCATCTCAGATTTCTTTGAGAGA...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR GCA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTTGGCAGAGCAGTGCTaGGGAGTCTTCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCLAEQC*GVFLEV
Trigger: GACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAA...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: QSHSWRDPALSGSHYPGDRILPG*FHFFNS
Trigger: ACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG...GTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CCA 90 bp CTCTTGATAGCCAGGATAAGTAAAATAGCCCCATCCATATTTATGGGATTCAGGTTGATGGCCAGCATCTaGCCCAGGTGCTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLIARISKIAPSIFMGFRLMASI*PRCSPP
Trigger: AGGAGGGGAGCACCTGGGCCAGATGCTGGCCATCAA...CCTGAATCCCATAAATATGGATGGGGCTATTTTACTTATCCTGGCTATCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCACAGCTCCCCTTGTGTaGAAGTTATTCCAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: HSVQRFHELLGHQHVGNITAPLV*KLFQLR
Trigger: TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGT...GATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGCCCCATCCATATTTATaGGATTCAGGAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: FLGREALYCLEYHVQLRVPHPYL*DSGKAS
Trigger: TGAAGCTTTTCCTGAATCCCATAAATATGGATGGGG...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGATAGAAGATGGTTTTCTTaGGAGAGAGGCCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: QSFADFGGPFIADVIATDRRWFS*ERGLVL
Trigger: CAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCT...ATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp GGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGATTGTCAACAAGAAGATaGTTTTCTTGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GIHSVQRFHELLGHQHVGLSTRR*FSWERG
Trigger: GCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAA...TCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CTGCGGGTGAACGGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LRVNGIHSVQRFHELLGHPFVQW*KISHHL
Trigger: AAGATGATGAGAAATTTTTCACCACTGGACAAAAGG...GTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCCGTTCACCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTCCTCCATGTTCCGAATaGAGTAGGAGACAGGCACTA +
Preference number: 4 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCPPCSE*SRRQAL
Trigger: TAGTGCCTGTCTCCTACTTCATTCGGAACATGGAGG...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTCAGAGAATTGGTTGTaGCTGAGATCCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSENWL*LRSSFL
Trigger: TAAAAAGCTGGATCTCAGTCACAACCAATTCTCTGA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACGATGGGAATTGGATGTaGATGAATTTGACCCCAACT +
Preference number: 4 (lower is better)
Translates to: QSHSWRDPALSGSHYPGDDGNWM*MNLTPT
Trigger: AGTTGGGGTCAAATTCATGCACATCCAATTCCCATC...GTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR GCA 90 bp CATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGGCTTGGCAGAGCAGTaGTGCGGAGTCTTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: HSSGSVSWGLSTRRWFSWGLAEQ*CGVFLE
Trigger: TTCAAGGAAGACTCCGCAGCACTGCTCTGCCAAGCC...CCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATAAGCCAGACTTTATTTaGTTGTGCCCAGCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHKPDFI*LCPAPA
Trigger: GGCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTT...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCCCCATCCATATTTATaGGATTCAGGAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCPHPYL*DSGKAS
Trigger: TGAAGCTTTTCCTGAATCCCATAAATATGGATGGGG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACAGAAGATGGTTTTCTTaGGAGAGAGGCCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: FTMPVFSSSFFITSLTWYRRWFS*ERGLVL
Trigger: CAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCT...GTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp AGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATTGTCAACAAGAAGATaGTTTTCTTGGGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: RPLHKATAPLVWKLFQLRLSTRR*FSWERG
Trigger: GCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAA...TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTCTGGATCAGTTTCATaGGGTTTGTCAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLSGSVS*GLSTRR
Trigger: TCTTCTTGTTGACAAACCCCATGAAACTGATCCAGA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR TCA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCPFVQW*KISHHL
Trigger: AAGATGATGAGAAATTTTTCACCACTGGACAAAAGG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR TCA 90 bp ATCTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: IFCLRLKRLVIVHGARTLPFVQW*KISHHL
Trigger: AAGATGATGAGAAATTTTTCACCACTGGACAAAAGG...GAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557453.5
CDS-3UTR TCA 90 bp AGACCAGACTTGTTGCTATGGCTTCATCGTGTTCAAGAAACTGAAGTTCACCATAGACGCCCTCCTCCATaGTGCAATTGTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RPDLLLWLHRVQETEVHHRRPPP*CNCLPA
Trigger: AGCTGGAAGACAATTGCATCATGGAGGAGGGCGTCT...ATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp AGAGCCACCTCATTCCCAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCTCAGAGAATTGGTTGTaGCTGAGATCCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RATSFPKPFMERSSFVRVSENWL*LRSSFL
Trigger: TAAAAAGCTGGATCTCAGTCACAACCAATTCTCTGA...GACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGAATGAGGTGGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR TCA 90 bp GCTCTATCATCACTTTCTGGAACTCATCCACAGACATCTTCATTGTCCCAGTGGATTCCAGTCCTTTGCTaGTTTTGGAGGCCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ALSSLSGTHPQTSSLSQWIPVLC*FWRPLH
Trigger: ATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAAT...CCACTGGGACAATGAAGATGTCTGTGGATGAGTTCCAGAAAGTGATGATAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp TTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACAAAGCTTCAGAACTCTaGGGCTTTCATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: FTMPVFSSSFFITSLTWYKASEL*GFHWIP
Trigger: TGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTT...GTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCTCTTTATCACCTCCCTaGCCTGGTACTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VFKKLKFTMPVFSSSFFISLSPP*PGTGSG
Trigger: CCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGA...GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp AATAGCCCCATCCATATTTATGGGATTCAGGAAAAGCTTCAGAACTCTGAGGCTTCTTTATCACCTCCCTaGCCTGGTACTGGTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NSPIHIYGIQEKLQNSEASLSPP*PGTGSG
Trigger: CCCTGAACCAGTACCAGGTCAGGGAGGTGATAAAGA...AGCCTCAGAGTTCTGAAGCTTTTCCTGAATCCCATAAATATGGATGGGGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp GCTCAATTTCAATCTCATCTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATCTTCTGTCTCAGGCTaGAGAGGCTTGTCATTGTCC +
Preference number: 4 (lower is better)
Translates to: AQFQSHLLSQAEEACHCPSSVSG*RGLSLS
Trigger: GGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGA...TGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGATGAGATTGAAATTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR GCA 90 bp GTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCTTGGCAGAGCAGTGCTaGGGAGTCTTCCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VFKKLKFTMPVFSSSFFILAEQC*GVFLEV
Trigger: GACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAA...GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAAAGGGGGACCTTGTTTTaGTCTATCATCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLERGTLF*SIITFW
Trigger: CCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCT...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp AGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATTCTGGATCAGTTTCATaGGGTTTGTCAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SHSWRDPALSGSHYPGDHSGSVS*GLSTRR
Trigger: TCTTCTTGTTGACAAACCCCATGAAACTGATCCAGA...ATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
3UTR CAA 72 bp TTCAGAACTCTGAGGCTTTCATTGGATTCCAGTCCTTaGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCA +
Preference number: 4 (lower is better)
Translates to: FRTLRLSLDSSP*LILEAPSLPMS
Trigger: TGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTAGAAGTCCACGATCGTaGTTTTGTGTTGGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCRSPRS*FCVGLH
Trigger: ATGCAGACCAACACAAAATCACGATCGTGGACTTCT...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp TGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCATTGCCGATGTCATTaGCACCGATATCCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: CQQEDGFLGREALYCLEYHCRCH*HRYPGR
Trigger: TCTACCTGGATATCGGTGGCAATGACATCGGCAATG...GTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAACCAGACTTGTTGCTATaGCTTCATCGTGTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLEPDLLL*LHRVQE
Trigger: TTCTTGAACACGATGAAGCCATAGCAACAAGTCTGG...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp AACCAGCGTCATTCTCTTGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTCATCATCCTGTCAGATaGAACCAGCGTCATTCTCTT +
Preference number: 4 (lower is better)
Translates to: NQRHSLASQVFSFGASLLHHPVR*NQRHSL
Trigger: AAGAGAATGACGCTGGTTCCATCTGACAGGATGATG...AAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 72 bp CAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTaGGTCTGCATAGCTCTGGATCAGTTTCATGGGGTT +
Preference number: 4 (lower is better)
Translates to: QALEEVHDRDFV*VCIALDQFHGV
Trigger: AACCCCATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 72 bp ACAGACATCTTCATTGTCCCAGTGGGGTTCAAGCTCTaGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TDIFIVPVGFKL*KKSTIVILCWS
Trigger: AGACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAATGAAGATGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
3UTR CAA 72 bp CTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTTCAAGAAACTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLSPRLLSRPDL*LWLHRVQETEV
Trigger: AACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp ATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCCCCCATCCATATTTATaGGATTCAGGAAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MGFVNKKMVFLGERPCTAPHPYL*DSGKAS
Trigger: TGAAGCTTTTCCTGAATCCCATAAATATGGATGGGG...GGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACAAACCCCAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR TCA 90 bp AACCAGCGTCATTCTCTTGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTCCTTTTGTCCAGTGGTaGAAAATTTCTCATCATCCT +
Preference number: 4 (lower is better)
Translates to: NQRHSLASQVFSFGASLLPFVQW*KISHHP
Trigger: AGGATGATGAGAAATTTTTCACCACTGGACAAAAGG...AAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR TCA 90 bp CTGCATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTAAAGCTTCAGAACTCTaGGGCTTTCATTGGATTCCA +
Preference number: 4 (lower is better)
Translates to: LHSSGSVSWGLSTRRWFSKASEL*GFHWIP
Trigger: TGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTT...AGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR GCA 90 bp CTCTTGATAGCCAGGATAAGTAAAATAGCCCCATCCATATTTATGGGATTCAGGAGGGGGACCTTGTTTTaGTCTATCATCACTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LLIARISKIAPSIFMGFRRGTLF*SIITFW
Trigger: CCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCT...CCTGAATCCCATAAATATGGATGGGGCTATTTTACTTATCCTGGCTATCAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CCA 90 bp ATCATCCTGTCAGATGGAACCAGCGTCATTCTCTTGCTTCACAAGTGTTCTCTTTCTGGATCAGTTTCATaGGGTTTGTCAACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: IILSDGTSVILLLHKCSLSGSVS*GLSTRR
Trigger: TCTTCTTGTTGACAAACCCCATGAAACTGATCCAGA...AAGAGAACACTTGTGAAGCAAGAGAATGACGCTGGTTCCATCTGACAGGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
3UTR CAA 72 bp AGCACGTTGGAAATATCAAGCTCTTCCATCCTGGATTaGGGGTTCCTCTTGATAGCCAGGATAAGTAAAATA +
Preference number: 4 (lower is better)
Translates to: STLEISSSSILD*GFLLIARISKI
Trigger: TATTTTACTTATCCTGGCTATCAAGAGGAACCCCAAATCCAGGATGGAAGAGCTTGATATTTCCAACGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GGCCAGCATCTGGCCCAGGTGCTCCCCTCCTACATCAGAGAATTGGTTGTGACTGACGTGAGCCCCACGTaGATGGCCAGCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GQHLAQVLPSYIRELVVTDVSPT*MASIWP
Trigger: GGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTC...AGTCACAACCAATTCTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGTTCCCCCGGAGACCATaGCACAAGGCCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: ADVIATDIQVDQAAVESEFPRRP*HKATAP
Trigger: GGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGGAA...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS GCA 90 bp CTGGGAGAGGTAGCTACTTCTCCAGCTCATCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCTGTTGAAAGGATCCCCACCCGCCTG +
Preference number: 5 (lower is better)
Translates to: LGEVATSPAHLGEWD*SIAGSPVERIPTRL
Trigger: CAGGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGCTGGAGAAGTAGCTACCTCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp CCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTTTGCTGGGAGCCCTGTaGAAAGGATCCCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: PETIAQGHSSPCVEVIPALLGAL*KGSPPA
Trigger: GGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCAA...AGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGTTGCTGGGAGCCCTGTaGAAAGGATCCCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: FLGREALYCLEYHVQLRVLLGAL*KGSPPA
Trigger: GGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCAA...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCCAGTGACGTGAGCCCCACGATTGGTCGACAGGGCTaGGCAGAGCAGTGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: APLVWKLFQLRSSDVSPTIGRQG*AEQCCG
Trigger: TCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAAT...CGTGGGGCTCACGTCACTGGATCTGAGCTGGAATAACTTCCACACAAGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGACGTGAGCCCCACGTaGATGGCCAGCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLDVSPT*MASIWP
Trigger: GGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTC...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTCTGCCACCATCCGACTaGCGAGGACTCCTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LLSQAEEACHCPWCQDPLLPPSD*RGLLSP
Trigger: CGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAG...AAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTTGCTGGGAGCCCTGTaGAAAGGATCCCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCLLGAL*KGSPPA
Trigger: GGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCAA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGGCTATAGCAATAGCCTaGGTACCCCTGGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FLGREALYCLEYHVQLRVAIAIA*VPLGPR
Trigger: CCTGGGCCCCAGGGGTACCAAGGCTATTGCTATAGC...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS CCA 90 bp CTCTGTCTGGGAGAGGTAGCTACTTCTCCAGCTCATCTGGGAGAGTaGGACTGCTCTATTGCTGGGAGCCCTGTTGAAAGGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: LCLGEVATSPAHLGE*DCSIAGSPVERIPT
Trigger: GGTGGGGATCCTTTCAACAGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGCTGGAGAAGTAGCTACCTCTCCCAGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000460005.1
ENST00000484640.5
ENST00000555189.1
ENST00000557453.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGCTATAGCAATAGCCTaGGTACCCCTGGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLAIAIA*VPLGPR
Trigger: CCTGGGCCCCAGGGGTACCAAGGCTATTGCTATAGC...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGATTGGTCGACAGGGCTaGGCAGAGCAGTGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLIGRQG*AEQCCG
Trigger: TCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAAT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACGACGTGAGCCCCACGTaGATGGCCAGCATCTGGCCC +
Preference number: 5 (lower is better)
Translates to: FTMPVFSSSFFITSLTWYDVSPT*MASIWP
Trigger: GGGCCAGATGCTGGCCATCAACGTGGGGCTCACGTC...GTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GGCCAGCATCTGGCCCAGGTGCTCCCCTCCTACATCAGAGAATTGGTTGTGACTAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: GQHLAQVLPSYIRELVVTRPQLP*CGSYSS
Trigger: GCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCT...AGTCACAACCAATTCTCTGATGTAGGAGGGGAGCACCTGGGCCAGATGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTTACCCCGGAGACCATaGCACAAGGCCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCLPRRP*HKATAP
Trigger: GGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR CAA 90 bp TCCTCCCTGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCAC +
Preference number: 5 (lower is better)
Translates to: SSLPPSDLRGLLSPRLLSLGREA*YCLEYH
Trigger: GTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAG...AGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAGGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGACTACACCCATCAGCTaGCAGGCCTCCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLTTPIS*QASRYS
Trigger: GCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCATATTGGTCGACAGGGCTaGGCAGAGCAGTGCTGCGGA +
Preference number: 5 (lower is better)
Translates to: SHSWRDPALSGSHYPGDHIGRQG*AEQCCG
Trigger: TCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAAT...ATGGTCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CAA 90 bp AGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATTACCCCGGAGACCATaGCACAAGGCCACAGCTCCC +
Preference number: 5 (lower is better)
Translates to: RPLHKATAPLVWKLFQLRLPRRP*HKATAP
Trigger: GGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAA...TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CAA 90 bp GGCATACACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGATTGGAGGCCCCTTCATaGCCGATGTCATTGCCACCG +
Preference number: 5 (lower is better)
Translates to: GIHSVQRFHELLGHQHVGLEAPS*PMSLPP
Trigger: CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAA...TCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTGTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTTGGAGGCCCCTTCATaGCCGATGTCATTGCCACCG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCLEAPS*PMSLPP
Trigger: CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GAACCAAGCCAGACTTTATTTGCTTGTGCCCAGCCCCTGCCACAGCATCTGTCCAGGCCTTGTACTGCCTaGAATACCACGTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EPSQTLFACAQPLPQHLSRPCTA*NTTSSC
Trigger: GCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCT...GGACAGATGCTGTGGCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGAGGCCTTGTACTGCCTaGAATACCACGTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLRPCTA*NTTSSC
Trigger: GCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGAGGCCTTGTACTGCCTaGAATACCACGTCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: FLGREALYCLEYHVQLRVRPCTA*NTTSSC
Trigger: GCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCT...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCAAGCTGCCACCATCCGACTaGCGAGGACTCCTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: SVQRFHELLGHQHVGNIKLPPSD*RGLLSP
Trigger: CGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCAG...CTTGATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GCTGCCAACTTCTTGCCACCTCTCGACTGCTTCCCTAAGAAGCACACCTGTCCACCAGACTTTATTTGCTaGTGCCCAGCCCCTGCCACA +
Preference number: 5 (lower is better)
Translates to: AANFLPPLDCFPKKHTCPPDFIC*CPAPAT
Trigger: TGTGGCAGGGGCTGGGCACAAGCAAATAAAGTCTGG...TGGACAGGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAAGAAGTTGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS TCA 90 bp TCCCTAAGAAGCACACCTGTCCATTCACCTCTGTCTCAAACTCTGTaGACTTCCCTCACCTGGGGGCATCCCAGGGGAGCCTGCAGTTAT +
Preference number: 5 (lower is better)
Translates to: SLRSTPVHSPLSQTL*TSLTWGHPRGACSY
Trigger: ATAACTGCAGGCTCCCCTGGGATGCCCCCAGGTGAGGGAAGTTCACAGAGTTTGAGACAGAGGTGAATGGACAGGTGTGCTTCTTAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460005.1
ENST00000484640.5
ENST00000557453.5
CDS TCA 90 bp TCCTCCACAGGCCATCCGCAGGGCAGACTCTGGAAAGGAGTGAGATaGCAGCTCCTGGAAACCAGATTTCTCCAGTTTCTGAGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SSTGHPQGRLWKGVR*QLLETRFLQFLRRS
Trigger: GCTTCTCCTCAGAAACTGGAGAAATCTGGTTTCCAGGAGCTGTCATCTCACTCCTTTCCAGAGTCTGCCCTGCGGATGGCCTGTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460005.1
ENST00000555189.1
CDS-3UTR CAA 90 bp AGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: RLKRLVIVHGARTLLRAAWMCMN*TPTLSG
Trigger: CCCAGACAGAGTTGGGGTCAAATTCATGCACATCCA...AGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCGCTATAGCAATAGCCTaGGTACCCCTGGGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVAIAIA*VPLGPR
Trigger: CCTGGGCCCCAGGGGTACCAAGGCTATTGCTATAGC...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGTCCTCCATGATGCAATaGTCTTCCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ADVIATDIQVDQAAVESESSMMQ*SSSSSL
Trigger: CAAACTGGAGCTGGAAGACAATTGCATCATGGAGGA...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLRPQLP*CGSYSS
Trigger: GCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCT...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTGCGGGTGGTGGGGTTCAAGCTCTaGAAGAAGTCCACGATCGTG +
Preference number: 5 (lower is better)
Translates to: FLGREALYCLEYHVQLRVVGFKL*KKSTIV
Trigger: CACGATCGTGGACTTCTTCAAGAGCTTGAACCCCAC...CACCCGCAGCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCCACAGACATCTTCATaGTCCCAGTGGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLPQTSS*SQWGSS
Trigger: GCTTGAACCCCACTGGGACAATGAAGATGTCTGTGG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GCCGATGTCATTGCCACCGATATCCAGGTAGACCAGGCAGCGGTTGAGTCGGAGTGGTTCAGGGGGACCTaGTTTTGCTCTATCATCACT +
Preference number: 5 (lower is better)
Translates to: ADVIATDIQVDQAAVESEWFRGT*FCSIIT
Trigger: AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCA...CTCCGACTCAACCGCTGCCTGGTCTACCTGGATATCGGTGGCAATGACATCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGCCAGACTTTATTTGCTaGTGCCCAGCCCCTGCCACA +
Preference number: 5 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPPDFIC*CPAPAT
Trigger: TGTGGCAGGGGCTGGGCACAAGCAAATAAAGTCTGG...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCAAGGGTGCCAGGACCCTCTaGAGGGCAGCTGCCAACTTC +
Preference number: 5 (lower is better)
Translates to: SVQRFHELLGHQHVGNIKGARTL*RAAANF
Trigger: GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACC...CTTGATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS CCA 90 bp ATGCTCGCCTTCAATCTCCAGGTCTGTTTCCGAATTCTCCCGGGCTaGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCACAGTA +
Preference number: 5 (lower is better)
Translates to: MLAFNLQVCFRILPG*FHFFNSRRGFGLTV
Trigger: TACTGTGAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCGGAAACAGACCTGGAGATTGAAGGCGAGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460005.1
ENST00000555189.1
CDS-3UTR CAA 90 bp GGCCTCACAGTAGAGCATTTTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATTTGCTGGGAGCCCTGTaGAAAGGATCCCCACCCGCC +
Preference number: 5 (lower is better)
Translates to: GLTVEHFIAALSYWLNFNLLGAL*KGSPPA
Trigger: GGCGGGTGGGGATCCTTTCAACAGGGCTCCCAGCAA...ATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTGTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp AGGCTTTCATTGGATTCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGACTACACCCATCAGCTaGCAGGCCTCCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: RLSLDSSPLLILEAPSLPTTPIS*QASRYS
Trigger: GCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGT...CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAATGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTGGAGAGATCCAGCTTaGTCAGGGTCACATTACCCC +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLWRDPA*SGSHYP
Trigger: GGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000393774.7
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSPLLI*EAPSLP
Trigger: CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCG +
Preference number: 5 (lower is better)
Translates to: LLSQAEEACHCPWCQDPLSPLLI*EAPSLP
Trigger: CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACT...AAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp GGTCACATTACCCCGGAGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAACTCTGAGGCTTTCATaGGATTCCAGTCCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GHITPETIAQGHSSPCVETLRLS*DSSPLL
Trigger: CAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGT...TTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCTCCGGGGTAATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CAA 90 bp GAGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTTCGGACACCAGCACGTaGGAAATATCAAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ETGTTPISLQASRYSSFCSDTST*EISSSS
Trigger: GGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCGA...ACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCAC +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCLGREA*YCLEYH
Trigger: GTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAG...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGTGGGGTTCAAGCTCTaGAAGAAGTCCACGATCGTG +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLVGFKL*KKSTIV
Trigger: CACGATCGTGGACTTCTTCAAGAGCTTGAACCCCAC...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGTGGGGTTCAAGCTCTaGAAGAAGTCCACGATCGTG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCVGFKL*KKSTIV
Trigger: CACGATCGTGGACTTCTTCAAGAGCTTGAACCCCAC...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGTGAACCACAGACATCTTCATaGTCCCAGTGGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: YTHQLAGLQVQLLLSSGEPQTSS*SQWGSS
Trigger: GCTTGAACCCCACTGGGACAATGAAGATGTCTGTGG...TTCACCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGGCTGCGGAGTCTTCCTaGAAGTCATTTCCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLAAESS*KSFPES
Trigger: GCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAGC...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AGACAGGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCTCGGTGCTTCCCTTCTaGGGGAAACTTCAATCTCCA +
Preference number: 5 (lower is better)
Translates to: RQALHPSACRPPGTAPFVSVLPF*GKLQSP
Trigger: TGGAGATTGAAGTTTCCCCAAGAAGGGAAGCACCGA...GACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCWMCMN*TPTLSG
Trigger: CCCAGACAGAGTTGGGGTCAAATTCATGCACATCCA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGTCCTCCATGATGCAATaGTCTTCCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRSSMMQ*SSSSSL
Trigger: CAAACTGGAGCTGGAAGACAATTGCATCATGGAGGA...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp AGAGCCACCTCATTCCCAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCTGGAGAGATCCAGCTTaGTCAGGGTCACATTACCCC +
Preference number: 5 (lower is better)
Translates to: RATSFPKPFMERSSFVRVWRDPA*SGSHYP
Trigger: GGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCA...GACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGGGAATGAGGTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CAA 90 bp TCCAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGTTGGATTCCAGTCCTTaGCTGATTTTGGAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SSPLLILEAPSLPMSLPPLDSSP*LILEAP
Trigger: AGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAA...CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTTGGATTCCAGTCCTTaGCTGATTTTGGAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLLDSSP*LILEAP
Trigger: AGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTCGGACACCAGCACGTaGGAAATATCAAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLSDTST*EISSSS
Trigger: GGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCGA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TGCCACCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGGATCGTGATTTTGTGTaGGTCTGCATAGCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: CHHPTCEDSSRRDFFLDQDRDFV*VCIALD
Trigger: ATCCAGAGCTATGCAGACCAACACAAAATCACGATC...CTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCAAAGCCATTCATGGAGAGATCCAGCTTTGTCAGGGTCACATTACCCCGGAGACCACAGACATCTTCATaGTCCCAGTGGGGTTCAAGC +
Preference number: 5 (lower is better)
Translates to: PKPFMERSSFVRVTLPRRPQTSS*SQWGSS
Trigger: GCTTGAACCCCACTGGGACAATGAAGATGTCTGTGG...TCTCCGGGGTAATGTGACCCTGACAAAGCTGGATCTCTCCATGAATGGCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCAGGGGGACCTTGTTTaGCTCTATCATCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLQGDLV*LYHHFL
Trigger: CAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTGGTTCAGGGGGACCTaGTTTTGCTCTATCATCACT +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLWFRGT*FCSIIT
Trigger: AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CGAATTCTCCCGGGCTGGTTTCACTTTTTCAACAGTCGGCGGGGATTCGGCCTCTCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTT +
Preference number: 5 (lower is better)
Translates to: RILPGWFHFFNSRRGFGLSRPDL*LWLHRV
Trigger: AACACGATGAAGCCATAGCAACAAGTCTGGTCTAGA...GAGGCCGAATCCCCGCCGACTGTTGAAAAAGTGAAACCAGCCCGGGAGAATTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCCAAGCCAGACTTTATTaGCTTGTGCCCAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: HSVQRFHELLGHQHVGNIQARLY*LVPSPC
Trigger: GCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTTG...GATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp ACCTCCCTGACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TSLTWYWFRGTLFCSIITWMCMN*TPTLSG
Trigger: CCCAGACAGAGTTGGGGTCAAATTCATGCACATCCA...AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTCAGGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CAGTCCTTTGCTGATTTTGGAGGCCCCTTCATTGCCGATGTCATTGCCACCGATTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: QSFADFGGPFIADVIATDWMCMN*TPTLSG
Trigger: CCCAGACAGAGTTGGGGTCAAATTCATGCACATCCA...ATCGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTCTCTTGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTGGGGAAACTTCACTACACCCATCAGCTaGCAGGCCTCCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: FSCFTSVLFRCFPSWGNFTTPIS*QASRYS
Trigger: GCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGT...GAAGTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTCCTCCATGATGCAATaGTCTTCCAGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSSMMQ*SSSSSL
Trigger: CAAACTGGAGCTGGAAGACAATTGCATCATGGAGGA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGGATCCAGCTTTTTAATTaGGTAATTGGTCGACAGGGC +
Preference number: 5 (lower is better)
Translates to: ALHPSACRPPGTAPFVQWIQLFN*VIGRQG
Trigger: GCCCTGTCGACCAATTACCAAATTAAAAAGCTGGAT...CCACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAAAGGCCACAGCTCCCCTaGTGTGGAAGTTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLERPQLP*CGSYSS
Trigger: GCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCT...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATCTCATCTTCTGTCTCAGGCTTGGAGGCCCCTTCATaGCCGATGTCATTGCCACCG +
Preference number: 5 (lower is better)
Translates to: LSLLCRTGSISISSSVSGLEAPS*PMSLPP
Trigger: CGGTGGCAATGACATCGGCAATGAAGGGGCCTCCAA...GCCTGAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTACTCTGAGGCTTTCATaGGATTCCAGTCCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCTLRLS*DSSPLL
Trigger: CAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGGATCGTGATTTTGTGTaGGTCTGCATAGCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLDRDFV*VCIALD
Trigger: ATCCAGAGCTATGCAGACCAACACAAAATCACGATC...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTT +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLSRPDL*LWLHRV
Trigger: AACACGATGAAGCCATAGCAACAAGTCTGGTCTAGA...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATTTTATCGCTGCTCTGTCGTACTGGCTCAATTTCAATCTCATCTTCTGTCTCGGTGCCAGGACCCTCTaGAGGGCAGCTGCCAACTTC +
Preference number: 5 (lower is better)
Translates to: HFIAALSYWLNFNLIFCLGARTL*RAAANF
Trigger: GAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACC...GAGACAGAAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTT +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLQVQLL*SSGEKF
Trigger: AAATTTTTCACCACTGGACAAAAGGAGCTGTACCTG...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTTGCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTT +
Preference number: 5 (lower is better)
Translates to: LVIVHGARTLLRAAANFLQVQLL*SSGEKF
Trigger: AAATTTTTCACCACTGGACAAAAGGAGCTGTACCTG...CAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAATGACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp TGTCTCAGGCTGAAGAGGCTTGTCATTGTCCATGGTGCCAGGACCCTCTTGAGGCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTT +
Preference number: 5 (lower is better)
Translates to: CLRLKRLVIVHGARTLLRQVQLL*SSGEKF
Trigger: AAATTTTTCACCACTGGACAAAAGGAGCTGTACCTG...CCTCAAGAGGGTCCTGGCACCATGGACAATGACAAGCCTCTTCAGCCTGAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp GCTCAATTTCAATCTCATCTTCTGTCTCAGGCTGAAGAGGCTTGTCATTGTCCAACTACACCCATCAGCTaGCAGGCCTCCAGGTACAGC +
Preference number: 5 (lower is better)
Translates to: AQFQSHLLSQAEEACHCPTTPIS*QASRYS
Trigger: GCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGT...TGGACAATGACAAGCCTCTTCAGCCTGAGACAGAAGATGAGATTGAAATTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484640.5
ENST00000557453.5
CDS-3UTR CAA 90 bp CCATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGATCCAGCTTTTTAATTaGGTAATTGGTCGACAGGGC +
Preference number: 5 (lower is better)
Translates to: PSDLRGLLSPRLLSRPDLIQLFN*VIGRQG
Trigger: GCCCTGTCGACCAATTACCAAATTAAAAAGCTGGAT...CAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTCCTACATCAGAGAATaGGTTGTGACTGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCSYIRE*VVTEIQ
Trigger: CTGGATCTCAGTCACAACCAATTCTCTGATGTAGGA...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTTGGATTCCAGTCCTTaGCTGATTTTGGAGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KMVFLGERPCTALNTTSSLDSSP*LILEAP
Trigger: AGGGGCCTCCAAAATCAGCAAAGGACTGGAATCCAA...GCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACCACGTCCAGCTCGGACACCAGCACGTaGGAAATATCAAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: KMVFLGERPCTALNTTSSSDTST*EISSSS
Trigger: GGAAGAGCTTGATATTTCCAACGTGCTGGTGTCCGA...GCTGGACGTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCAAGCTTGGGAGAGAGGCCTaGTACTGCCTTGAATACCAC +
Preference number: 5 (lower is better)
Translates to: SVQRFHELLGHQHVGNIKLGREA*YCLEYH
Trigger: GTGGTATTCAAGGCAGTACAAGGCCTCTCTCCCAAG...CTTGATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GGCACTACACCCATCAGCTTGCAGGCCTCCAGGTACAGCTCCTTTTGTCCAGTGTCAGTTTCATGGGGTTaGTCAACAAGAAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: GTTPISLQASRYSSFCPVSVSWG*STRRWF
Trigger: AAACCATCTTCTTGTTGACAAACCCCATGAAACTGA...CACTGGACAAAAGGAGCTGTACCTGGAGGCCTGCAAGCTGATGGGTGTAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp CATCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTATCCAGCTTTTTAATTaGGTAATTGGTCGACAGGGC +
Preference number: 5 (lower is better)
Translates to: HPTCEDSSRRDFFLDQTCIQLFN*VIGRQG
Trigger: GCCCTGTCGACCAATTACCAAATTAAAAAGCTGGAT...ACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CACTCCGTCCAACGTTTTCATGAACTGCTCGGACACCAGCACGTTGGAAATATCACTCTGAGGCTTTCATaGGATTCCAGTCCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: HSVQRFHELLGHQHVGNITLRLS*DSSPLL
Trigger: CAGCAAAGGACTGGAATCCAATGAAAGCCTCAGAGT...GATATTTCCAACGTGCTGGTGTCCGAGCAGTTCATGAAAACGTTGGACGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGGATTTGGGGTTCCTCTaGATAGCCAGGATAAGTAAA +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLDLGFL*IARISK
Trigger: TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATC...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CACCATGCCTGTCTTCTCATCGAGCTTCTTTATCACCTCCCTGACCTGGTACTGGATCGTGATTTTGTGTaGGTCTGCATAGCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: HHACLLIELLYHLPDLVLDRDFV*VCIALD
Trigger: ATCCAGAGCTATGCAGACCAACACAAAATCACGATC...CAGTACCAGGTCAGGGAGGTGATAAAGAAGCTCGATGAGAAGACAGGCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTCCAGGGGGACCTTGTTTaGCTCTATCATCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: PSGVQALEEVHDRDFVLVQGDLV*LYHHFL
Trigger: CAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTG...GACCAACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AGACCATTGCACAAGGCCACAGCTCCCCTTGTGTGGAAGTTATTCCAGCTCAGATCTAGACCAGACTTGTaGCTATGGCTTCATCGTGTT +
Preference number: 5 (lower is better)
Translates to: RPLHKATAPLVWKLFQLRSRPDL*LWLHRV
Trigger: AACACGATGAAGCCATAGCAACAAGTCTGGTCTAGA...TCTGAGCTGGAATAACTTCCACACAAGGGGAGCTGTGGCCTTGTGCAATGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TGTCAACAAGAAGATGGTTTTCTTGGGAGAGAGGCCTTGTACTGCCTTGAATACAGTGGGACTGCTCTATaGCTGGGAGCCCTGTTGAAA +
Preference number: 5 (lower is better)
Translates to: CQQEDGFLGREALYCLEYSGTAL*LGALLK
Trigger: TTTCAACAGGGCTCCCAGCAATAGAGCAGTCCCACT...GTATTCAAGGCAGTACAAGGCCTCTCTCCCAAGAAAACCATCTTCTTGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp TCCGACTTGCGAGGACTCCTCTCGCCGAGACTTCTTTCTAGACCAGACTTGTTGTCAGTTTCATGGGGTTaGTCAACAAGAAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: SDLRGLLSPRLLSRPDLLSVSWG*STRRWF
Trigger: AAACCATCTTCTTGTTGACAAACCCCATGAAACTGA...CAACAAGTCTGGTCTAGAAAGAAGTCTCGGCGAGAGGAGTCCTCGCAAGTCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000484640.5
CDS-3UTR CAA 90 bp AGACCAGACTTGTTGCTATGGCTTCATCGTGTTCAAGAAACTGAAGTTCACCATCAAGCCAGACTTTATTaGCTTGTGCCCAGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: RPDLLLWLHRVQETEVHHQARLY*LVPSPC
Trigger: GCAGGGGCTGGGCACAAGCAAATAAAGTCTGGCTTG...ATGGTGAACTTCAGTTTCTTGAACACGATGAAGCCATAGCAACAAGTCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GACCTGGTACTGGTTCAGGGGGACCTTGTTTTGCTCTATCATCACTTTCTGGAATCCTACATCAGAGAATaGGTTGTGACTGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: DLVLVQGDLVLLYHHFLESYIRE*VVTEIQ
Trigger: CTGGATCTCAGTCACAACCAATTCTCTGATGTAGGA...TTCCAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCAGTACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp ATTGTCCCAGTGGGGTTCAAGCTCTTGAAGAAGTCCACGATCGTGATTTTGTGTTGGTTCAGGGGGACCTaGTTTTGCTCTATCATCACT +
Preference number: 5 (lower is better)
Translates to: IVPVGFKLLKKSTIVILCWFRGT*FCSIIT
Trigger: AGTGATGATAGAGCAAAACAAGGTCCCCCTGAACCA...ACACAAAATCACGATCGTGGACTTCTTCAAGAGCTTGAACCCCACTGGGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CTCTTGATAGCCAGGATAAGTAAAATAGCCCCATCCATATTTATGGGATTCAGGAGTCCTTTGCTGATTTaGGAGGCCCCTTCATTGCCG +
Preference number: 5 (lower is better)
Translates to: LLIARISKIAPSIFMGFRSPLLI*EAPSLP
Trigger: CGGCAATGAAGGGGCCTCCAAAATCAGCAAAGGACT...CCTGAATCCCATAAATATGGATGGGGCTATTTTACTTATCCTGGCTATCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GGGATTCAGGAAAAGCTTCAGAACTCTGAGGCTTTCATTGGATTCCAGTCCTTTCAGGGGGACCTTGTTTaGCTCTATCATCACTTTCTG +
Preference number: 5 (lower is better)
Translates to: GIQEKLQNSEAFIGFQSFQGDLV*LYHHFL
Trigger: CAGAAAGTGATGATAGAGCAAAACAAGGTCCCCCTG...AAAGGACTGGAATCCAATGAAAGCCTCAGAGTTCTGAAGCTTTTCCTGAATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCGCTGCGGAGTCTTCCTaGAAGTCATTTCCTGAAAGC +
Preference number: 5 (lower is better)
Translates to: VFKKLKFTMPVFSSSFFIAAESS*KSFPES
Trigger: GCTTTCAGGAAATGACTTCAAGGAAGACTCCGCAGC...GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp TTCTCTTGCTTCACAAGTGTTCTCTTTCGGTGCTTCCCTTCTTGGGGAAACTTCGATTTGGGGTTCCTCTaGATAGCCAGGATAAGTAAA +
Preference number: 5 (lower is better)
Translates to: FSCFTSVLFRCFPSWGNFDLGFL*IARISK
Trigger: TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATC...GAAGTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACACTTGTGAAGCAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484640.5
CDS-3UTR CAA 90 bp GAAGTCCACGATCGTGATTTTGTGTTGGTCTGCATAGCTCTGGATCAGTTTCATCAGGTACAGCTCCTTTaGTCCAGTGGTGAAAAATTT +
Preference number: 5 (lower is better)
Translates to: EVHDRDFVLVCIALDQFHQVQLL*SSGEKF
Trigger: AAATTTTTCACCACTGGACAAAAGGAGCTGTACCTG...ATGAAACTGATCCAGAGCTATGCAGACCAACACAAAATCACGATCGTGGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGTCCTACATCAGAGAATaGGTTGTGACTGAGATCCAG +
Preference number: 5 (lower is better)
Translates to: HSSGSVSWGLSTRRWFSWSYIRE*VVTEIQ
Trigger: CTGGATCTCAGTCACAACCAATTCTCTGATGTAGGA...CCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp CATAGCTCTGGATCAGTTTCATGGGGTTTGTCAACAAGAAGATGGTTTTCTTGGGATTTGGGGTTCCTCTaGATAGCCAGGATAAGTAAA +
Preference number: 5 (lower is better)
Translates to: HSSGSVSWGLSTRRWFSWDLGFL*IARISK
Trigger: TTTACTTATCCTGGCTATCAAGAGGAACCCCAAATC...CCAAGAAAACCATCTTCTTGTTGACAAACCCCATGAAACTGATCCAGAGCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS-3UTR CAA 90 bp GTGTTCAAGAAACTGAAGTTCACCATGCCTGTCTTCTCATCGAGCTTCTTTATCTCAGTTTCATGGGGTTaGTCAACAAGAAGATGGTTT +
Preference number: 5 (lower is better)
Translates to: VFKKLKFTMPVFSSSFFISVSWG*STRRWF
Trigger: AAACCATCTTCTTGTTGACAAACCCCATGAAACTGA...GATAAAGAAGCTCGATGAGAAGACAGGCATGGTGAACTTCAGTTTCTTGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216450.7
ENST00000484640.5
CDS CAA 90 bp ATTGTCCATGGTGCCAGGACCCTCTTGAGGGCAGCTGCCAACTTCTaGCCACCTCTCGACTGCTTCCCTAAGAAGCACACCTGTCCATTC +
Preference number: 6 (lower is better)
Translates to: IVHGARTLLRAAANF*PPLDCFPKKHTCPF
Trigger: GAATGGACAGGTGTGCTTCTTAGGGAAGCAGTCGAGAGGTGGCAAGAAGTTGGCAGCTGCCCTCAAGAGGGTCCTGGCACCATGGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460005.1
ENST00000484640.5
ENST00000557453.5
CDS GCA 72 bp GTAGCTACTTCTCCAGCTCATCTGGGAGAGTGGGACTaGTCTATTGCTGGGAGCCCTGTTGAAAGGATCCCC +
Preference number: 6 (lower is better)
Translates to: VATSPAHLGEWD*SIAGSPVERIP
Trigger: GGGGATCCTTTCAACAGGGCTCCCAGCAATAGAGCAGTCCCACTCTCCCAGATGAGCTGGAGAAGTAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000460005.1
ENST00000484640.5
ENST00000555189.1
ENST00000557453.5
CDS TCA 72 bp GATGACAGCTCCTGGAAACCAGATTTCTCCAGTTTCTaGGGAGAAGCTGCCCTGACTGCCCCCAAATGCCCA +
Preference number: 6 (lower is better)
Translates to: DDSSWKPDFSSF*GEAALTAPKCP
Trigger: TGGGCATTTGGGGGCAGTCAGGGCAGCTTCTCCTCAGAAACTGGAGAAATCTGGTTTCCAGGAGCTGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460005.1
ENST00000555189.1
CDS GCA 72 bp TTGGTAATTGGTCGACAGGGCTTGGCAGAGCAGTGCTaGGGAGTCTTCCTTGAAGTCATTTCCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LVIGRQGLAEQC*GVFLEVISISW
Trigger: CCAGGAGATGGAAATGACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAATTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS CAA 90 bp GCCCTGGGAAGAGTAGGCTTTGATGGGAATTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGGAGAGGTAGCTACTTCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: ALGRVGFDGNWMCMN*TPTLSGRGSYFSSS
Trigger: TGAGCTGGAGAAGTAGCTACCTCTCCCAGACAGAGTTGGGGTCAAATTCATGCACATCCAATTCCCATCAAAGCCTACTCTTCCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000460005.1
ENST00000484640.5
ENST00000555189.1
ENST00000557453.5
CDS GCA 72 bp GCCCTGGGAAGAGTAGGCTTTGATGGGAATTGGATGTaGATGAATTTGACCCCAACTCTGTCTGGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: ALGRVGFDGNWM*MNLTPTLSGRG
Trigger: ACCTCTCCCAGACAGAGTTGGGGTCAAATTCATGCACATCCAATTCCCATCAAAGCCTACTCTTCCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000460005.1
ENST00000484640.5
ENST00000555189.1
ENST00000557453.5
CDS GCA 72 bp AATTTGGTAATTGGTCGACAGGGCTTGGCAGAGCAGTaGTGCGGAGTCTTCCTTGAAGTCATTTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: NLVIGRQGLAEQ*CGVFLEVISIS
Trigger: GGAGATGGAAATGACTTCAAGGAAGACTCCGCAGCACTGCTCTGCCAAGCCCTGTCGACCAATTACCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216450.7
CDS CCA 72 bp CTCACAGTAGAGCATTTTATCGCTGCTCTGTCGTACTaGCTCAATTTCAATCTCATCTGGGGGCATCCCAGG +
Preference number: 6 (lower is better)
Translates to: LTVEHFIAALSY*LNFNLIWGHPR
Trigger: CCTGGGATGCCCCCAGATGAGATTGAAATTGAGCCAGTACGACAGAGCAGCGATAAAATGCTCTACTGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000555189.1
CDS CAA 72 bp TCGGTGCTTCCCTTCTTGGGGAAACTCCTAGGACTATaGCAAAGATTGCATAGGATGCCCCACGTGGAAACA +
Preference number: 6 (lower is better)
Translates to: SVLPFLGKLLGL*QRLHRMPHVET
Trigger: TGTTTCCACGTGGGGCATCCTATGCAATCTTTGCAATAGTCCTAGGAGTTTCCCCAAGAAGGGAAGCACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460005.1
CDS CAA 72 bp AGAGTAGGCTTTGATGGGAATTGGATGTGCATGAATTaGACCCCAACTCTGTCTGGGAGAGGTAGCTACTTC +
Preference number: 6 (lower is better)
Translates to: RVGFDGNWMCMN*TPTLSGRGSYF
Trigger: GAAGTAGCTACCTCTCCCAGACAGAGTTGGGGTCAAATTCATGCACATCCAATTCCCATCAAAGCCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216450.7
ENST00000393774.7
ENST00000460005.1
ENST00000484640.5
ENST00000555189.1
ENST00000557453.5
CDS CAA 90 bp TGTTCTCTTTCGGTGCTTCCCTTCTTGGGGAAACTCCTAGGACTATaGCAAAGATTGCATAGGATGCCCCACGTGGAAACATTTAGAAGA +
Preference number: 6 (lower is better)
Translates to: CSLSVLPFLGKLLGL*QRLHRMPHVETFRR
Trigger: TCTTCTAAATGTTTCCACGTGGGGCATCCTATGCAATCTTTGCAATAGTCCTAGGAGTTTCCCCAAGAAGGGAAGCACCGAAAGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460005.1