Pregenerated sensors for LRRC72 (Homo sapiens)
Ensembl gene IDs: ENSG00000205858Ensembl transcript IDs: ENST00000382124.7, ENST00000401542.3, ENST00000482711.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CACCCAGCTGGAAGAGACAGAGCTGGGATTCAAACAGCCTGTCTCCATAATTTTGGACATCAGGACACATaGGCGGCCGAAGCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPAGRDRAGIQTACLHNFGHQDT*AAEAAV Trigger: CACCGCTGCTTCGGCCGCCCATGTGTCCTGATGTCC...AAAATTATGGAGACAGGCTGTTTGAATCCCAGCTCTGTCTCTTCCAGCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382124.7 |
||
| CDS-3UTR GCA 90 bp | AAACCTAGAAAGATCAATGACCTCTGTCAGTTCCCCAAGATCACCCAGCTGGAACAACTGCCCGGCGACTaGTCTGTAGGGCAGTTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRKINDLCQFPKITQLEQLPGD*SVGQFR Trigger: CCGAAACTGCCCTACAGAGCAGTCGCCGGGCAGTTG...TTCCAGCTGGGTGATCTTGGGGAACTGACAGAGGTCATTGATCTTTCTAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382124.7 |
||
| CDS-3UTR TCA 90 bp | CAATTTCAGTATCTTGTCTCTCCAATAGAAAACTGTGGATTCCAGGAAGTGGTACGGCCGAAGCAGCGGTaGTTAATCCGGCCTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QFQYLVSPIENCGFQEVVRPKQR*LIRPRP Trigger: CGGGCGAGGCCGGATTAATCACCGCTGCTTCGGCCG...TACCACTTCCTGGAATCCACAGTTTTCTATTGGAGAGACAAGATACTGAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382124.7 |
||
| CDS-3UTR CCA 90 bp | CACCCAGCTGGAAGAGACAGAGCTGGGATTCAAACAGCCTGTCTCCATAATTTTTGGAAGAGACAGAGCTaGGATTCAAACAGCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HPAGRDRAGIQTACLHNFWKRQS*DSNSLS Trigger: AGACAGGCTGTTTGAATCCCAGCTCTGTCTCTTCCA...AAAATTATGGAGACAGGCTGTTTGAATCCCAGCTCTGTCTCTTCCAGCTGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000382124.7 |
||
| CDS-3UTR TCA 90 bp | CAATTTCAGTATCTTGTCTCTCCAATAGAAAACTGTGGATTCCAGGAAGTGGTACCACATATCTTTAGCTaGTCTTCAACTGCCCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QFQYLVSPIENCGFQEVVPHIFS*SSTARR Trigger: TCGCCGGGCAGTTGAAGATCAGCTAAAGATATGTGG...TACCACTTCCTGGAATCCACAGTTTTCTATTGGAGAGACAAGATACTGAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000382124.7 |
||
| CDS CCA 90 bp | CAAGGTACGGGGCACGGGGTTCGGGTCCCAGGACATCAGGACACATaGGCGGCCGAAGCAGCGGTGATTAATCCGGCCTCGCCCGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: QGTGHGVRVPGHQDT*AAEAAVINPASPAG Trigger: ACCGGCGGGCGAGGCCGGATTAATCACCGCTGCTTCGGCCGCCCATGTGTCCTGATGTCCTGGGACCCGAACCCCGTGCCCCGTACCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000382124.7 ENST00000401542.3 ENST00000482711.1 |
||
| CDS TCA 90 bp | TTCGGGTCCCAGGACATCAGGACACATGGGCGGCCGAAGCAGCGGTaGTTAATCCGGCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGSQDIRTHGRPKQR*LIRPRPPVAPKRDL Trigger: CAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGATTAATCACCGCTGCTTCGGCCGCCCATGTGTCCTGATGTCCTGGGACCCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382124.7 ENST00000401542.3 |
||
| CDS GCA 90 bp | ATCCGGCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTTGGTaGACAGCTCGTTGTTCTGTTACCAACAGTTACCGCATTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRPRPPVAPKRDLAW*TARCSVTNSYRIPV Trigger: AACGGGAATGCGGTAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CCA 90 bp | TTAATCCGGCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTTaGTGCACAGCTCGTTGTTCTGTTACCAACAGTTACCGCATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LIRPRPPVAPKRDLA*CTARCSVTNSYRIP Trigger: GGGAATGCGGTAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS TCA 90 bp | TCGTGTTGGAACTGTGTCCCAGTTCATAGAGGTCAAAGTCATCACTaGTCTCTTCATGGACCTCACAAAAACAGCATCTTCTGGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SCWNCVPVHRGQSHH*SLHGPHKNSIFWVI Trigger: GATGACCCAGAAGATGCTGTTTTTGTGAGGTCCATGAAGAGATCAGTGATGACTTTGACCTCTATGAACTGGGACACAGTTCCAACACGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CCA 90 bp | TCAGATTTAGCATTCCCTTTAATTCCTTCACTGTTGCATCAATGTTaGTTAGCTCATTGTGGTGTAGCAGGAGTATATGCAATGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDLAFPLIPSLLHQC*LAHCGVAGVYAMKA Trigger: TGCCTTCATTGCATATACTCCTGCTACACCACAATGAGCTAACCAACATTGATGCAACAGTGAAGGAATTAAAGGGAATGCTAAATCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS TCA 72 bp | CAGGACATCAGGACACATGGGCGGCCGAAGCAGCGGTaGTTAATCCGGCCTCGCCCGCCGGTGGCACCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QDIRTHGRPKQR*LIRPRPPVAPK Trigger: CTTCGGTGCCACCGGCGGGCGAGGCCGGATTAATCACCGCTGCTTCGGCCGCCCATGTGTCCTGATGTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000382124.7 ENST00000401542.3 |
||
| CDS CCA 72 bp | GGGCACGGGGTTCGGGTCCCAGGACATCAGGACACATaGGCGGCCGAAGCAGCGGTGATTAATCCGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GHGVRVPGHQDT*AAEAAVINPAS Trigger: CGAGGCCGGATTAATCACCGCTGCTTCGGCCGCCCATGTGTCCTGATGTCCTGGGACCCGAACCCCGTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000382124.7 ENST00000401542.3 ENST00000482711.1 |
||
| CDS CCA 72 bp | TCCGGCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTaGCTTGGTGCACAGCTCGTTGTTCTGTTACCAACA | + |
|
Preference number: 6 (lower is better) Translates to: SGLARRWHRRET*LGAQLVVLLPT Trigger: TGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS GCA 72 bp | CGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTTGGTaGACAGCTCGTTGTTCTGTTACCAACAGTTACCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPVAPKRDLAW*TARCSVTNSYR Trigger: GCGGTAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CCA 72 bp | CCTCGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTTaGTGCACAGCTCGTTGTTCTGTTACCAACAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PRPPVAPKRDLA*CTARCSVTNSY Trigger: GTAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CAA 72 bp | GCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTaGGTGCACAGCTCGTTGTTCTGTTACCAACAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ASPAGGTEERLG*VHSSLFCYQQL Trigger: TAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CAA 90 bp | ATTAATCCGGCCTCGCCCGCCGGTGGCACCGAAGAGAGACTTGGCTaGGTGCACAGCTCGTTGTTCTGTTACCAACAGTTACCGCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: INPASPAGGTEERLG*VHSSLFCYQQLPHS Trigger: GGAATGCGGTAACTGTTGGTAACAGAACAACGAGCTGTGCACCAAGCCAAGTCTCTCTTCGGTGCCACCGGCGGGCGAGGCCGGATTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS TCA 72 bp | ACATCAGCATCCCTCCTGTGGCCACATATCTTTAGCTaGTCTTCAACTGCCCGGCGACTGCTCTGTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TSASLLWPHIFS*SSTARRLLCRA Trigger: TGCCCTACAGAGCAGTCGCCGGGCAGTTGAAGATCAGCTAAAGATATGTGGCCACAGGAGGGATGCTGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000382124.7 ENST00000401542.3 ENST00000482711.1 |
||
| CDS CAA 90 bp | TTGAACTGTGTGAGATTCCACCTATCCAAGTGGTCTTGGTTCTTGTaGCTAAGGCAGCTCACTCATCAAAGGGGCAGATGTGGGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LNCVRFHLSKWSWFL*LRQLTHQRGRCGFG Trigger: CCCAAACCCACATCTGCCCCTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCACACAGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS CAA 72 bp | GTGAGATTCCACCTATCCAAGTGGTCTTGGTTCTTGTaGCTAAGGCAGCTCACTCATCAAAGGGGCAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: VRFHLSKWSWFL*LRQLTHQRGRC Trigger: ACATCTGCCCCTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS CAA 72 bp | TGTGTGAGATTCCACCTATCCAAGTGGTCTTGGTTCTaGTTGCTAAGGCAGCTCACTCATCAAAGGGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CVRFHLSKWSWF*LLRQLTHQRGR Trigger: TCTGCCCCTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS CAA 90 bp | CTCTTGAACTGTGTGAGATTCCACCTATCCAAGTGGTCTTGGTTCTaGTTGCTAAGGCAGCTCACTCATCAAAGGGGCAGATGTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LLNCVRFHLSKWSWF*LLRQLTHQRGRCGF Trigger: AAACCCACATCTGCCCCTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCACACAGTTCAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS CCA 72 bp | TGTGCCTTCCTCTTCAAGGTACCTTTCCTCTCGTGTTaGAACTGTGTCCCAGTTCATAGAGGTCAAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CAFLFKVPFLSC*NCVPVHRGQSH Trigger: ATGACTTTGACCTCTATGAACTGGGACACAGTTCCAACACGAGAGGAAAGGTACCTTGAAGAGGAAGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CCA 72 bp | TTGAACTGTGTGAGATTCCACCTATCCAAGTGGTCTTaGTTCTTGTTGCTAAGGCAGCTCACTCATCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNCVRFHLSKWS*FLLLRQLTHQR Trigger: CCTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCACACAGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS CAA 72 bp | CTTGAACTGTGTGAGATTCCACCTATCCAAGTGGTCTaGGTTCTTGTTGCTAAGGCAGCTCACTCATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LELCEIPPIQVV*VLVAKAAHSSK Trigger: CTTTGATGAGTGAGCTGCCTTAGCAACAAGAACCAAGACCACTTGGATAGGTGGAATCTCACACAGTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482711.1 |
||
| CDS TCA 72 bp | TTCGGTCAAGCAGCTCCACTCCTGGAAGGTGGTAGATaGTATATAAACGATACAGGTTATATTGGCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FGQAAPLLEGGR*YINDTGYIGTK Trigger: CTTTGTGCCAATATAACCTGTATCGTTTATATATCATCTACCACCTTCCAGGAGTGGAGCTGCTTGACCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS TCA 72 bp | AACTGTGTCCCAGTTCATAGAGGTCAAAGTCATCACTaGTCTCTTCATGGACCTCACAAAAACAGCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NCVPVHRGQSHH*SLHGPHKNSIF Trigger: GAAGATGCTGTTTTTGTGAGGTCCATGAAGAGATCAGTGATGACTTTGACCTCTATGAACTGGGACACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS GCA 72 bp | AATGCAAAATCTGAAGGTACTCTCTGGGCTGGTTTTTaGTTAAATGGTGATTTAGGATCCCATGAAGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: NAKSEGTLWAGF*LNGDLGSHEAS Trigger: GGATGCTTCATGGGATCCTAAATCACCATTTAAGCAAAAACCAGCCCAGAGAGTACCTTCAGATTTTGCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CCA 72 bp | GCATTCCCTTTAATTCCTTCACTGTTGCATCAATGTTaGTTAGCTCATTGTGGTGTAGCAGGAGTATATGCA | + |
|
Preference number: 6 (lower is better) Translates to: AFPLIPSLLHQC*LAHCGVAGVYA Trigger: TGCATATACTCCTGCTACACCACAATGAGCTAACCAACATTGATGCAACAGTGAAGGAATTAAAGGGAATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CAA 72 bp | AGCATTCCCTTTAATTCCTTCACTGTTGCATCAATGTaGGTTAGCTCATTGTGGTGTAGCAGGAGTATATGC | + |
|
Preference number: 6 (lower is better) Translates to: SIPFNSFTVASM*VSSLWCSRSIC Trigger: GCATATACTCCTGCTACACCACAATGAGCTAACCAACATTGATGCAACAGTGAAGGAATTAAAGGGAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CAA 90 bp | TTCAGATTTAGCATTCCCTTTAATTCCTTCACTGTTGCATCAATGTaGGTTAGCTCATTGTGGTGTAGCAGGAGTATATGCAATGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FRFSIPFNSFTVASM*VSSLWCSRSICNEG Trigger: GCCTTCATTGCATATACTCCTGCTACACCACAATGAGCTAACCAACATTGATGCAACAGTGAAGGAATTAAAGGGAATGCTAAATCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||
| CDS CAA 72 bp | AATTCCTTCACTGTTGCATCAATGTTGGTTAGCTCATaGTGGTGTAGCAGGAGTATATGCAATGAAGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: NSFTVASMLVSS*WCSRSICNEGK Trigger: TTTGCCTTCATTGCATATACTCCTGCTACACCACAATGAGCTAACCAACATTGATGCAACAGTGAAGGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401542.3 |
||