RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000033122

Ensembl transcript IDs: ENST00000310961.9, ENST00000370958.5, ENST00000415775.2, ENST00000441830.1, ENST00000588515.5, ENST00000607936.5, ENST00000608470.5, ENST00000608744.5, ENST00000608815.5, ENST00000609498.5, ENST00000651217.1, ENST00000651989.2

Found 1171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGAGGTGACACAGTTGGACAAGCAGCACCCTTGGAGTCGGGGTTaGGGAGGAGTGCGTGAGATGTTTCAAAAGGATCTCAGTGCATTT +
Preference number: 1 (lower is better)
Translates to: REVTQLDKQHPWSRG*GGVREMFQKDLSAF
Trigger: AAATGCACTGAGATCCTTTTGAAACATCTCACGCACTCCTCCCCAACCCCGACTCCAAGGGTGCTGCTTGTCCAACTGTGTCACCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp AGCCTTAAGATGAAGTTCCTTCCTCCAGAAAGGAGGAGCTGCCCTTaGTTCCAGCAAGCCCCCTCTGACTTTGACCCAAAAGGGTTACTC +
Preference number: 1 (lower is better)
Translates to: SLKMKFLPPERRSCP*FQQAPSDFDPKGLL
Trigger: GAGTAACCCTTTTGGGTCAAAGTCAGAGGGGGCTTGCTGGAATCAAGGGCAGCTCCTCCTTTCTGGAGGAAGGAACTTCATCTTAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp AGGATAGAAGCAGACATCCACTGCCTTTGGAAAAACATGGGGAGTTaGAGGGACGGATCTATAGCAGCAACTGCAGCAATGAAGACAGGT +
Preference number: 1 (lower is better)
Translates to: RIEADIHCLWKNMGS*RDGSIAATAAMKTG
Trigger: ACCTGTCTTCATTGCTGCAGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCTTCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp AGACACTGGGCTATAAGATACCAAAGAGTAGGCCCCTGGAGAGTTTaGGGCATCATGCTATCAAAGACAGCAATGGTGGCTGTTTCCTTC +
Preference number: 1 (lower is better)
Translates to: RHWAIRYQRVGPWRV*GIMLSKTAMVAVSF
Trigger: GAAGGAAACAGCCACCATTGCTGTCTTTGATAGCATGATGCCTCAAACTCTCCAGGGGCCTACTCTTTGGTATCTTATAGCCCAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp AGGGTCTCTTATCTGTGTTTCAGCAGGATAGAAGCAGACATCCACTaGCTTTGGAAAAACATGGGGAGTTGGAGGGACGGATCTATAGCA +
Preference number: 1 (lower is better)
Translates to: RVSYLCFSRIEADIH*LWKNMGSWRDGSIA
Trigger: TGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCTTCTATCCTGCTGAAACACAGATAAGAGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp TCAGGGCTGTCTGAAGAAGGGGCATGGTCACCAGAACGAAGAGACTaGAGGATATGCCTGAATCTGATTTCTTTTATCCAGTTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: SGLSEEGAWSPERRD*RICLNLISFIQFLS
Trigger: AGAGAGGAACTGGATAAAAGAAATCAGATTCAGGCATATCCTCCAGTCTCTTCGTTCTGGTGACCATGCCCCTTCTTCAGACAGCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp GAGGGCAGGAATAAAGGGACTCACCACATTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTG +
Preference number: 1 (lower is better)
Translates to: EGRNKGTHHIALYCL*CGTSLIFPLDCEIL
Trigger: CAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGGTGAGTCCCTTTATTCCTGCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp ACGCCTGGCCTGCCTGTTTTCATTATTACCTGCCTGTTCTCAGTATaGAACATGGCAGTACTATTGACAGTGAGGTGCTTTGGCATATCA +
Preference number: 1 (lower is better)
Translates to: TPGLPVFIITCLFSV*NMAVLLTVRCFGIS
Trigger: TGATATGCCAAAGCACCTCACTGTCAATAGTACTGCCATGTTGCATACTGAGAACAGGCAGGTAATAATGAAAACAGGCAGGCCAGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp TTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCTGAGGGGACCACATTACATCCCTCA +
Preference number: 1 (lower is better)
Translates to: LPCTVFDVELLSSFL*TVRFCAEGTTLHPS
Trigger: TGAGGGATGTAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR CCA 90 bp TCTTATCTGTGTTTCAGCAGGATAGAAGCAGACATCCACTGCCTTTaGAAAAACATGGGGAGTTGGAGGGACGGATCTATAGCAGCAACT +
Preference number: 1 (lower is better)
Translates to: SYLCFSRIEADIHCL*KNMGSWRDGSIAAT
Trigger: AGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCTTCTATCCTGCTGAAACACAGATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp ACAATGTTGTCACATCAGGAGTGGCAGAGGTGTTTACTAGGATTATaGTCCTTTCAGCTGTGTGTCTTAGAAGGATCTCCTGAAGCCCTG +
Preference number: 1 (lower is better)
Translates to: TMLSHQEWQRCLLGL*SFQLCVLEGSPEAL
Trigger: CAGGGCTTCAGGAGATCCTTCTAAGACACACAGCTGAAAGGATCATAATCCTAGTAAACACCTCTGCCACTCCTGATGTGACAACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp TCTGAAGAAGGGGCATGGTCACCAGAACGAAGAGACTGGAGGATATaGCTGAATCTGATTTCTTTTATCCAGTTCCTCTCTGATTCTCTG +
Preference number: 1 (lower is better)
Translates to: SEEGAWSPERRDWRI*LNLISFIQFLSDSL
Trigger: CAGAGAATCAGAGAGGAACTGGATAAAAGAAATCAGATTCAGGCATATCCTCCAGTCTCTTCGTTCTGGTGACCATGCCCCTTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp AGGGCTTTGATGGAATTAGCAAAGAAGAAGCTCAGACCAGGAGGCTaGCTAAGCTGTGAGGGTGAGGATATAATTAGCTTAGAGGAAGTA +
Preference number: 1 (lower is better)
Translates to: RALMELAKKKLRPGG*LSCEGEDIISLEEV
Trigger: TACTTCCTCTAAGCTAATTATATCCTCACCCTCACAGCTTAGCCAGCCTCCTGGTCTGAGCTTCTTCTTTGCTAATTCCATCAAAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp TGCCTGTTCTCAGTATGCAACATGGCAGTACTATTGACAGTGAGGTaGTTTGGCATATCAGATAACTTTTCCAGTTGGTCAAGGATCCCT +
Preference number: 1 (lower is better)
Translates to: CLFSVCNMAVLLTVR*FGISDNFSSWSRIP
Trigger: AGGGATCCTTGACCAACTGGAAAAGTTATCTGATATGCCAAAGCACCTCACTGTCAATAGTACTGCCATGTTGCATACTGAGAACAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp ATCTCAGGCAGAATGGGAAAGATACACATTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTG +
Preference number: 1 (lower is better)
Translates to: ISGRMGKIHIALYCL*CGTSLIFPLDCEIL
Trigger: CAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTCTGCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR TCA 90 bp CATTTCTTACATTGCTTAGTGCTCAGTGTGTTGTTACAAAGAGCATaGGCTCAGAACCCAACTGGGAAGACTCTACCAGCTGAAGAAATG +
Preference number: 1 (lower is better)
Translates to: HFLHCLVLSVLLQRA*AQNPTGKTLPAEEM
Trigger: CATTTCTTCAGCTGGTAGAGTCTTCCCAGTTGGGTTCTGAGCTCATGCTCTTTGTAACAACACACTGAGCACTAAGCAATGTAAGAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp CTGCAGTTATTTACGTCCCCACTGTCACCTGAGCCTTGTCCTTTTTaGCAAGATACATATATACAAGGGACAAGAACTTTCCTTCCTGAG +
Preference number: 1 (lower is better)
Translates to: LQLFTSPLSPEPCPF*QDTYIQGTRTFLPE
Trigger: CTCAGGAAGGAAAGTTCTTGTCCCTTGTATATATGTATCTTGTCAAAAAGGACAAGGCTCAGGTGACAGTGGGGACGTAAATAACTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp GCTGAAATTGTCAACATTGGAGAACTCTTAATTGAAGGCTCTGGCTaGATAGGCCATGTCAGCATTTCAGCTGTCTGTCTAAATGACATG +
Preference number: 1 (lower is better)
Translates to: AEIVNIGELLIEGSG*IGHVSISAVCLNDM
Trigger: CATGTCATTTAGACAGACAGCTGAAATGCTGACATGGCCTATCCAGCCAGAGCCTTCAATTAAGAGTTCTCCAATGTTGACAATTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp TTGATGCGCAATGACACTAAGTTTCACATTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTG +
Preference number: 1 (lower is better)
Translates to: LMRNDTKFHIALYCL*CGTSLIFPLDCEIL
Trigger: CAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGTCATTGCGCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
3UTR GCA 90 bp GGTTCCAACCGTAGACTAATAAGAGTCATGGAATGTTTACATAAATaGTGCGTGAATTTCACAACCTTCCACCTTTTGAGGTGCTGCCAT +
Preference number: 1 (lower is better)
Translates to: GSNRRLIRVMECLHK*CVNFTTFHLLRCCH
Trigger: ATGGCAGCACCTCAAAAGGTGGAAGGTTGTGAAATTCACGCAGCATTTATGTAAACATTCCATGACTCTTATTAGTCTACGGTTGGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp TGGCAAAATTCTCGCTCCTCTTCCAGAGATTCAAGAGATTCTGGTTaGTATTTATCTTGTCTAGCAAGGCATTCACACTTGCCACGTTTA +
Preference number: 1 (lower is better)
Translates to: WQNSRSSSRDSRDSG*YLSCLARHSHLPRL
Trigger: TAAACGTGGCAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAAGAGGAGCGAGAATTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp CTGAACCCTGAATTGTCCCAACTGAATGAAGCTCCCTTGCTCATTTaGAGCCACCAGTTAACAATGTCCTCTTATCTACATCTTTTGTTA +
Preference number: 1 (lower is better)
Translates to: LNPELSQLNEAPLLI*SHQLTMSSYLHLLL
Trigger: TAACAAAAGATGTAGATAAGAGGACATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAGGGTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp CTGCCAACAGACTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCA +
Preference number: 1 (lower is better)
Translates to: LPTDFQPGSPVICPN*YLKVRSPLIKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTTGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
3UTR CCA 90 bp AAATTGGCAAAATTCTCGCTCCTCTTCCAGAGATTCAAGAGATTCTaGTTGCTATTTATCTTGTCTAGCAAGGCATTCACACTTGCCACG +
Preference number: 1 (lower is better)
Translates to: KLAKFSLLFQRFKRF*LLFILSSKAFTLAT
Trigger: CGTGGCAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAAGAGGAGCGAGAATTTTGCCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp ACTAGGATTATGATCCTTTCAGCTGTGTGTCTTAGAAGGATCTCCTaGAGCCCTGGGTTTGATATAGAAACCATAAGAAAAAGACTTGGG +
Preference number: 1 (lower is better)
Translates to: TRIMILSAVCLRRIS*SPGFDIETIRKRLG
Trigger: CCCAAGTCTTTTTCTTATGGTTTCTATATCAAACCCAGGGCTTCAGGAGATCCTTCTAAGACACACAGCTGAAAGGATCATAATCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp ACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACACATTaGCTTGTACTGTCTTTGATGTGGAACTTCTCTCATCTTTCCTCT +
Preference number: 1 (lower is better)
Translates to: TPNSYDLRQNGKDTH*LVLSLMWNFSHLSS
Trigger: AGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR GCA 90 bp ATACTTTCTCTGCCAACAGACTTTCAACCTGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTAT +
Preference number: 1 (lower is better)
Translates to: ILSLPTDFQPGSPVI*PNWYLKVRSPLIKY
Trigger: ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTTGGCAGAGAAAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
3UTR CCA 90 bp CCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTaGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTGCCTGAACCAGAT +
Preference number: 1 (lower is better)
Translates to: PDFPSCFIWTYLYDF*VFLWKRVVPVPEPD
Trigger: ATCTGGTTCAGGCACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588515.5
3UTR TCA 90 bp CAGGAATTTAAGAATAGCATGAATCCTTCCCTGAAGATAGACAAATaGACCAGATCCTCTCAAGGTCCCTTTCTGTCTTATGATAGGACA +
Preference number: 1 (lower is better)
Translates to: QEFKNSMNPSLKIDK*TRSSQGPFLSYDRT
Trigger: TGTCCTATCATAAGACAGAAAGGGACCTTGAGAGGATCTGGTTCATTTGTCTATCTTCAGGGAAGGATTCATGCTATTCTTAAATTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp TTTATTCAGGATGATACTGCAGTTATTTACGTCCCCACTGTCACCTaGGCCTTGTCCTTTTTGACAAGATACATATATACAAGGGACAAG +
Preference number: 1 (lower is better)
Translates to: FIQDDTAVIYVPTVT*ALSFLTRYIYTRDK
Trigger: CTTGTCCCTTGTATATATGTATCTTGTCAAAAAGGACAAGGCTCAGGTGACAGTGGGGACGTAAATAACTGCAGTATCATCCTGAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp TTTATATTATACTTGCCTGAGGATCACCAGAAGGATTTTGTCTTGTaGAGAAGGCTAAAAGCAGAGTCATACTTTCTCTGCCAACAGACT +
Preference number: 1 (lower is better)
Translates to: FILYLPEDHQKDFVL*RRLKAESYFLCQQT
Trigger: AGTCTGTTGGCAGAGAAAGTATGACTCTGCTTTTAGCCTTCTGCACAAGACAAAATCCTTCTGGTGATCCTCAGGCAAGTATAATATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 90 bp AACATTATTTGCAAAAGTATTTGTAGACAGAGTTGGGCCAAAGTCTaGATGAAGCTATTGTCTCATTTGCAGGCTCCCTTTCTACTGACT +
Preference number: 1 (lower is better)
Translates to: NIICKSICRQSWAKV*MKLLSHLQAPFLLT
Trigger: AGTCAGTAGAAAGGGAGCCTGCAAATGAGACAATAGCTTCATGCAGACTTTGGCCCAACTCTGTCTACAAATACTTTTGCAAATAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp TGTATTTTGACTTGTTCCAAAAAGGAGTTAACATGGGATGAAGAATaGATTTGCTGTACTGCATTAGGCATCAGCAAGATGGTGACCTTG +
Preference number: 1 (lower is better)
Translates to: CILTCSKKELTWDEE*ICCTALGISKMVTL
Trigger: CAAGGTCACCATCTTGCTGATGCCTAATGCAGTACAGCAAATTCATTCTTCATCCCATGTTAACTCCTTTTTGGAACAAGTCAAAATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
3UTR TCA 90 bp AGGTCTTTTCTCCTTACTTCCCATAGAACTGTTCTTAGGGAAGGTTaGCATAATCACATGGTTAAAATCCCAAGGGACTCAATATTCCTA +
Preference number: 1 (lower is better)
Translates to: RSFLLTSHRTVLREG*HNHMVKIPRDSIFL
Trigger: TAGGAATATTGAGTCCCTTGGGATTTTAACCATGTGATTATGTCAACCTTCCCTAAGAACAGTTCTATGGGAAGTAAGGAGAAAAGACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp TCAGAACTCCTTAGAAGAATAGATGTTGATGATACATGGTATGTGTaGTCCAATCTCATGCAAACAGTATTTTCAGGGGATCACTTGAGC +
Preference number: 1 (lower is better)
Translates to: SELLRRIDVDDTWYV*SNLMQTVFSGDHLS
Trigger: GCTCAAGTGATCCCCTGAAAATACTGTTTGCATGAGATTGGATCACACATACCATGTATCATCAACATCTATTCTTCTAAGGAGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp AGTCCAGGAAAACCTTTAACAAGGATTTGGAGTTTCAGCATAATCTaGGAAGGACCTACATGTTGTATTTTCAAAGGCTCTAAGGAGACT +
Preference number: 1 (lower is better)
Translates to: SPGKPLTRIWSFSII*EGPTCCIFKGSKET
Trigger: AGTCTCCTTAGAGCCTTTGAAAATACAACATGTAGGTCCTTCTCAGATTATGCTGAAACTCCAAATCCTTGTTAAAGGTTTTCCTGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp ATTCATCAGACATATTTGATCGGTGTGCTAATGAGGGGTAGAAATTaGTTAGGGACAGCGTTAAGACTGTCCTTAACAGTTAGTAAACAT +
Preference number: 1 (lower is better)
Translates to: IHQTYLIGVLMRGRN*LGTALRLSLTVSKH
Trigger: ATGTTTACTAACTGTTAAGGACAGTCTTAACGCTGTCCCTAACCAATTTCTACCCCTCATTAGCACACCGATCAAATATGTCTGATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp TTTTTCAATACCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCA +
Preference number: 1 (lower is better)
Translates to: FFNTFQPGSPVICPN*YLKVRSPLIKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGGTATTGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp GGAACTTTGCAAAATAAGTCCACAATGGAACATCATCAGGGAGTATaGCAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAAC +
Preference number: 1 (lower is better)
Translates to: GTLQNKSTMEHHQGV*QKNEQLYSVSEEFN
Trigger: GTTAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
3UTR GCA 90 bp AGAGAAATGCCCAAACATTATAAAGCCGAAGTATTAAGCATTCATTaGATTCCACTGACGCTAGGTGTCATCAAAGCTAAAACCAAATTT +
Preference number: 1 (lower is better)
Translates to: REMPKHYKAEVLSIH*IPLTLGVIKAKTKF
Trigger: AAATTTGGTTTTAGCTTTGATGACACCTAGCGTCAGTGGAATGCAATGAATGCTTAATACTTCGGCTTTATAATGTTTGGGCATTTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 90 bp CATCTTCTTAACCTATTGGATTTCATTATTTGCATAACTTTTTATTaGCCCAGTGTGCCAATAAACTTGCTGTTTGGTCGGCATATCACA +
Preference number: 1 (lower is better)
Translates to: HLLNLLDFIICITFY*PSVPINLLFGRHIT
Trigger: TGTGATATGCCGACCAAACAGCAAGTTTATTGGCACACTGGGTCAATAAAAAGTTATGCAAATAATGAAATCCAATAGGTTAAGAAGATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 90 bp TTACTTCCCATAGAACTGTTCTTAGGGAAGGTTGACATAATCACATaGTTAAAATCCCAAGGGACTCAATATTCCTATACTTTAACTGTA +
Preference number: 1 (lower is better)
Translates to: LLPIELFLGKVDIIT*LKSQGTQYSYTLTV
Trigger: TACAGTTAAAGTATAGGAATATTGAGTCCCTTGGGATTTTAACCATGTGATTATGTCAACCTTCCCTAAGAACAGTTCTATGGGAAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGCCATCTCAGCTCACTaGAACCTCCGCCTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKAISAH*NLRLLG
Trigger: ACCCAGCAGGCGGAGGTTGCAGTGAGCTGAGATGGC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATTCTCTTCCCACAGCTaGTGGGGGTCCTGCACCCCA +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKFSSHS*WGSCTP
Trigger: TGGGGTGCAGGACCCCCAGCAGCTGTGGGAAGAGAA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACCGCACCCGGCTTCGTaGCACTCTTTATGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKPHPAS*HSLCEL
Trigger: CAGCTCACATAAAGAGTGTCACGAAGCCGGGTGCGG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp CAGGATAGAAGCAGACATCCACTGCCTTTGGAAAAACATGGGGAGTaGGAGGGACGGATCTATAGCAGCAACTGCAGCAATGAAGACAGG +
Preference number: 2 (lower is better)
Translates to: QDRSRHPLPLEKHGE*EGRIYSSNCSNEDR
Trigger: CCTGTCTTCATTGCTGCAGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCTTCTATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAACCTGGCCAAGAAGGTaGAACTCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKTWPRR*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACCTTCTTGGCCAGGT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAGCTGCTGGGGGTCCTaGACCCCAACCCAGCCTAGA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLSCWGS*TPTQPR
Trigger: TCTAGGCTGGGTTGGGGTGCAGGACCCCCAGCAGCT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TATTTTTCAGTAGGCTTCATACCCTTTTCGTACCTGAACCCTGAATaGTCCCAACTGAATGAAGCTCCCTTGCTCATTTGCAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: YFSVGFIPFSYLNPE*SQLNEAPLLICSHQ
Trigger: CTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAGGGTTCAGGTACGAAAAGGGTATGAAGCCTACTGAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGGCATATACAACTTTaGGGCAGTGTTTCTGATGGA +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKRHIQL*GSVSDG
Trigger: TCCATCAGAAACACTGCCTCAAAGTTGTATATGCCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAATGAGGGGTAGAAATTaGTTAGGGACAGCGTTAAGA +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKMRGRN*LGTALR
Trigger: TCTTAACGCTGTCCCTAACCAATTTCTACCCCTCAT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp ATCCTTACCAGGGAGTGTTTCCAAACCATTCTCTTGCAGGCAGTGTaGAAAGTAAGGAAGATTGGAACCTGTCTCAGTAAGAAGCTGAGA +
Preference number: 2 (lower is better)
Translates to: ILTRECFQTILLQAV*KVRKIGTCLSKKLR
Trigger: TCTCAGCTTCTTACTGAGACAGGTTCCAATCTTCCTTACTTTCAACACTGCCTGCAAGAGAATGGTTTGGAAACACTCCCTGGTAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TTTGCAATAGGATGGTTGAGGGCAGGAATAAAGGGACTCACCACATaGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCATCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FAIGWLRAGIKGLTT*PCTVFDVELLSSFL
Trigger: GAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGGTGAGTCCCTTTATTCCTGCCCTCAACCATCCTATTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTGTAAATTCTTCTTTTaGCATCTGGAAGAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLCKFFF*HLEEQE
Trigger: CTCCTGCTCTTCCAGATGTCAAAAGAAGAATTTACA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTCCGCCTGCTGGGTTaGAGCAATTCTCCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLLRLLG*SNSPAS
Trigger: TGAGGCAGGAGAATTGCTTCAACCCAGCAGGCGGAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGGCCCCTGGAGAGTTTaGGGCATCATGCTATCAAAG +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIGPWRV*GIMLSK
Trigger: CTTTGATAGCATGATGCCTCAAACTCTCCAGGGGCC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGGCAGGAAAATCGTTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPGRKIV*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAACGATTTTCCTGCC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGTAATAAAGGGATTGTaGTTAGGAGCTTACCAACCT +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKVIKGL*LGAYQP
Trigger: AGGTTGGTAAGCTCCTAACCACAATCCCTTTATTAC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp ACCAAAATATTCAGTCTTTGTGGCTGTGATTGGATAGGAGGGCCTTaGAATACTTGTATCAGTAAAGAGATACTGGGCAGGGCCCTTGAA +
Preference number: 2 (lower is better)
Translates to: TKIFSLCGCDWIGGP*NTCISKEILGRALE
Trigger: TTCAAGGGCCCTGCCCAGTATCTCTTTACTGATACAAGTATTCAAAGGCCCTCCTATCCAATCACAGCCACAAAGACTGAATATTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TGTTATCTCTTCCTCTTTATGAGCTTAGAACTCTGGGATGACTCCTaGGCCTCTCCTCCTGTGCCACTTAACTACTCATTAGAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: CYLFLFMSLELWDDS*ASPPVPLNYSLEEN
Trigger: ATTTTCCTCTAATGAGTAGTTAAGTGGCACAGGAGGAGAGGCCAAGGAGTCATCCCAGAGTTCTAAGCTCATAAAGAGGAAGAGATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TTTTCGTACCTGAACCCTGAATTGTCCCAACTGAATGAAGCTCCCTaGCTCATTTGCAGCCACCAGTTAACAATGTCCTCTTATCTACAT +
Preference number: 2 (lower is better)
Translates to: FSYLNPELSQLNEAP*LICSHQLTMSSYLH
Trigger: ATGTAGATAAGAGGACATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAGGGTTCAGGTACGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 2 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCACCATCTCAAAGGTCGTaGTCCAAGGTAAGGTCCAGA +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPPSQRS*SKVRSR
Trigger: TCTGGACCTTACCTTGGATCACGACCTTTGAGATGG...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATTTCAGTATGGCTTTTaGCCTGGTTATGTTGTATTC +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKFQYGF*PGYVVF
Trigger: GAATACAACATAACCAGGTCAAAAGCCATACTGAAA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAACCAGAGGATATAAATaGCTTCACATAAACTTTGGG +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKTRGYK*LHINFG
Trigger: CCCAAAGTTTATGTGAAGCCATTTATATCCTCTGGT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp ATTTGTCCACAGCCCACATTCTGTTTTCTTGCTATAATGTATTCTTaGGGTATGGTGTTGGTGGGTGATGGGAAATATTCTGAGCCAAGG +
Preference number: 2 (lower is better)
Translates to: ICPQPTFCFLAIMYS*GMVLVGDGKYSEPR
Trigger: CCTTGGCTCAGAATATTTCCCATCACCCACCAACACCATACCCAAAGAATACATTATAGCAAGAAAACAGAATGTGGGCTGTGGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TGTGCAATTTATATCCTTACCAGGGAGTGTTTCCAAACCATTCTCTaGCAGGCAGTGTTGAAAGTAAGGAAGATTGGAACCTGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: CAIYILTRECFQTIL*QAVLKVRKIGTCLS
Trigger: ACTGAGACAGGTTCCAATCTTCCTTACTTTCAACACTGCCTGCAAGAGAATGGTTTGGAAACACTCCCTGGTAAGGATATAAATTGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp ATCCTTCTCATTTCTGCATGCCTTAATCCAGGCCCATTTCTTACATaGCTTAGTGCTCAGTGTGTTGTTACAAAGAGCATGAGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: ILLISACLNPGPFLT*LSAQCVVTKSMSSE
Trigger: TTCTGAGCTCATGCTCTTTGTAACAACACACTGAGCACTAAGCAATGTAAGAAATGGGCCTGGATTAAGGCATGCAGAAATGAGAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TCGCTCCTCTTCCAGAGATTCAAGAGATTCTGGTTGCTATTTATCTaGTCTAGCAAGGCATTCACACTTGCCACGTTTAGCCTATCAAAT +
Preference number: 2 (lower is better)
Translates to: SLLFQRFKRFWLLFI*SSKAFTLATFSLSN
Trigger: ATTTGATAGGCTAAACGTGGCAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAAGAGGAGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TTGGCAAAATTCTCGCTCCTCTTCCAGAGATTCAAGAGATTCTGGTaGCTATTTATCTTGTCTAGCAAGGCATTCACACTTGCCACGTTT +
Preference number: 2 (lower is better)
Translates to: LAKFSLLFQRFKRFW*LFILSSKAFTLATF
Trigger: AAACGTGGCAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAAGAGGAGCGAGAATTTTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 2 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTTGTTAAGTATTGTCTaGTCCTCTCTCTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELLSIV*SSLSKS
Trigger: GCTTTTTGAGAGAGAGGATCAGACAATACTTAACAA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: LSTWISSNMPKLVLEGQESHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTTTGGCACTAATGTTTaGCATTGGTCCAGCAATTGG +
Preference number: 2 (lower is better)
Translates to: MESRIHKELVCASVLRNYFGTNV*HWSSNW
Trigger: CCAATTGCTGGACCAATGGCAAACATTAGTGCCAAA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
3UTR-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTTGAAGCAATTCTCCTaGCTCAGCCTCCCCAGTAAC +
Preference number: 2 (lower is better)
Translates to: SFYFEINRPDSISIKVWELKQFS*LSLPSN
Trigger: GTTACTGGGGAGGCTGAGGCAGGAGAATTGCTTCAA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAACGATTCTACAAGTATaGCTGAAGATTTATATCCCA +
Preference number: 2 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKTILQV*LKIYIP
Trigger: TGGGATATAAATCTTCAGCCATACTTGTAGAATCGT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGGACAAACCTTAGAATaGTCCGGAGGCAGACTTACA +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIGQTLE*SGGRLT
Trigger: TGTAAGTCTGCCTCCGGACCATTCTAAGGTTTGTCC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGCACAGCCAGAGGCTaGCAATTAAAACTAATACAT +
Preference number: 2 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKCTARG*QLKLIH
Trigger: ATGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 2 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAAATGTTCATGCAAGTaGTCACCAACCTGGAGATGC +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIKCSCK*SPTWRC
Trigger: GCATCTCCAGGTTGGTGATCACTTGCATGAACATTT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGACACCTGCCGTATTTaGTTTAAAATGGGTGGCACT +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPDTCRI*FKMGGT
Trigger: AGTGCCACCCATTTTAAAGCAAATACGGCAGGTGTC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAACAGACTTTCAACCTaGATCTCCAGTAATATGCCC +
Preference number: 2 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYNRLST*ISSNMP
Trigger: GGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
3UTR-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATCTTCTTTTGACATCTaGAAGAGCAGGAGGGAAGGC +
Preference number: 2 (lower is better)
Translates to: FKGTISIFKCKHAAQSITSSFDI*KSRREG
Trigger: GCCTTCCCTCCTGCTCTTCCAGATGTCAAAAGAAGA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000651989.2
3UTR CAA 90 bp ACAGACTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: TDFQPGSPVICPNWY*KVRSPLIKYLKAQS
Trigger: AGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
3UTR CAA 90 bp GCAGAATTAGTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTaGTACGATTTTTGGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTG +
Preference number: 2 (lower is better)
Translates to: AELVPDFPSCFIWTY*YDFWVFLWKRVVPV
Trigger: CACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAATTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588515.5
3UTR-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 2 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCTTGTTAAGTATTGTCTaGTCCTCTCTCTCAAAAAGC +
Preference number: 2 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLLLSIV*SSLSKS
Trigger: GCTTTTTGAGAGAGAGGATCAGACAATACTTAACAA...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGAAACCAAGAAGAGCTaGACGATTACTCCTCTCTCC +
Preference number: 2 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFETKKS*TITPLS
Trigger: GGAGAGAGGAGTAATCGTTCAGCTCTTCTTGGTTTC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608815.5
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGCTGTAACCATCTGTTaGTACTCAAGGCTCTCCGAA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLAVTIC*YSRLSE
Trigger: TTCGGAGAGCCTTGAGTATCAACAGATGGTTACAGC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAAATTTGTGGAAGTATTaGCAGAGCTGCAGAGGTATC +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPNLWKY*QSCRGI
Trigger: GATACCTCTGCAGCTCTGTCAATACTTCCACAAATT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATTTGGCACTAATGTTTaGCATTGGTCCAGCAATTGG +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIFGTNV*HWSSNW
Trigger: CCAATTGCTGGACCAATGGCAAACATTAGTGCCAAA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGAGTTTGAGGCATCATaGTATCAAAGACAGCAATGG +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPEFEAS*YQRQQW
Trigger: CCATTGCTGTCTTTGATAGCATGATGCCTCAAACTC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACTAATGTTTGCCATTaGTCCAGCAATTGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: MESRIHKELVCASVLRNYTNVCH*SSNWQN
Trigger: ATTTTGCCAATTGCTGGACCAATGGCAAACATTAGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
3UTR-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 2 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR CAA 90 bp AAAGACTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: KDFQPGSPVICPNWY*KVRSPLIKYLKAQS
Trigger: AGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
3UTR CAA 90 bp TCTATTAGGTACTTAAACACAAAGCAACCCCCAGTGGTGGAGTGTTaGCTAACAGTAAAGACTAATGTTTTCCTTGTATGTAGGTACATG +
Preference number: 2 (lower is better)
Translates to: SIRYLNTKQPPVVEC*LTVKTNVFLVCRYM
Trigger: CATGTACCTACATACAAGGAAAACATTAGTCTTTACTGTTAGCAAACACTCCACCACTGGGGGTTGCTTTGTGTTTAAGTACCTAATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp AATACCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: NTFQPGSPVICPNWY*KVRSPLIKYLKAQS
Trigger: AGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 2 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTTAGAAGGATCTCCTaGAGCCCTGGGTTTGATATA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLLRRIS*SPGFDI
Trigger: TATATCAAACCCAGGGCTTCAGGAGATCCTTCTAAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGATTTAGCATTTCTGTaGAAGGAACTACAGTGGAAC +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIDLAFL*KELQWN
Trigger: GTTCCACTGTAGTTCCTTTCACAGAAATGCTAAATC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATCTTCCCTCTACCTTTaGTCCGGGTTGGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLSSLYL*SGLEEK
Trigger: TTTTTCTTCCAACCCGGAGCAAAGGTAGAGGGAAGA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGACTTGATCTATGTCTaGATAGTTCCAGGCATTCTT +
Preference number: 2 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIDLIYV*IVPGIL
Trigger: AAGAATGCCTGGAACTATGCAGACATAGATCAAGTC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAACGGAAAGACAAGGTaGCAAGCACACTACATTTTC +
Preference number: 2 (lower is better)
Translates to: SFYFEINRPDSISIKVWENGKTR*QAHYIF
Trigger: GAAAATGTAGTGTGCTTGCCACCTTGTCTTTCCGTT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCACAATCTCCATTTTCAAATGTAAGC +
Preference number: 2 (lower is better)
Translates to: SPVICPNWYLKVRSP*IKYLKAQSPFSNVS
Trigger: GCTTACATTTGAAAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATTCTCAGAGCTCTGGTaGCATCATTCAGTGATACTA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLFSELW*HHSVIL
Trigger: TAGTATCACTGAATGATGTCACCAGAGCTCTGAGAA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAGCTTTGGCCTATTTTaGAATGCAGTTGCTCTAAGG +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLSFGLF*NAVALR
Trigger: CCTTAGAGCAACTGCATTTCAAAATAGGCCAAAGCT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGGGAAAGATACACATTaGCTTGTACTGTCTTTGATG +
Preference number: 2 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLGKDTH*LVLSLM
Trigger: CATCAAAGACAGTACAAGGCAATGTGTATCTTTCCC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAACTAATGTTTGCCATTaGTCCAGCAATTGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTTNVCH*SSNWQN
Trigger: ATTTTGCCAATTGCTGGACCAATGGCAAACATTAGT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
3UTR-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: FKGTISIFKCKHAAQSITVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR CAA 90 bp TATCACTTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTaGAATACTGAGATACTGCTGACACAGAATTCCTTATATCAATAT +
Preference number: 2 (lower is better)
Translates to: YHLLFDSTCRTLNRG*NTEILLTQNSLYQY
Trigger: ATATTGATATAAGGAATTCTGTGTCAGCAGTATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAAGTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATCTTTTCCTCATTTCTaGACTGCAGAACAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLSFPHF*TAEQEV
Trigger: TACTTCCTGTTCTGCAGTTCAGAAATGAGGAAAAGA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGGGAAAGATACACATTaGCTTGTACTGTCTTTGATG +
Preference number: 2 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFGKDTH*LVLSLM
Trigger: CATCAAAGACAGTACAAGGCAATGTGTATCTTTCCC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR GCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGGCTATTTGTTAGGCTaGTTATTCAACCTGTTATTT +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPGYLLG*LFNLLF
Trigger: AAATAACAGGTTGAATAAGCAGCCTAACAAATAGCC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACATTGGTCCAGCAATTaGCAAAATTTGTTTCTATGT +
Preference number: 2 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTHWSSN*QNLFLC
Trigger: ACATAGAAACAAATTTTGCCAATTGCTGGACCAATG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
3UTR-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 2 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAAATATCTGGATATGGTaGCTTGACATGAGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPNIWIW*LDMSFQ
Trigger: TTGAAAACTCATGTCAAGCCACCATATCCAGATATT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 90 bp CTAGACATGCTTGTTTTCTTTCTCACTTATGACTTCTGGATCTATTaGTTAGAGTTCATTACTGAAGCCTTTGACAATCTCAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: LDMLVFFLTYDFWIY*LEFITEAFDNLNEF
Trigger: GAACTCATTGAGATTGTCAAAGGCTTCAGTAATGAACTCTAACAAATAGATCCAGAAGTCATAAGTGAGAAAGAAAACAAGCATGTCTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCATTGGTCCAGCAATTaGCAAAATTTGTTTCTATGT +
Preference number: 2 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLHWSSN*QNLFLC
Trigger: ACATAGAAACAAATTTTGCCAATTGCTGGACCAATG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
3UTR-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGATTGCAAACTACCTTaGGAATCCAATGATCACTTT +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLDCKLP*ESNDHF
Trigger: AAAGTGATCATTGGATTCCCAAGGTAGTTTGCAATC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAACCCTATAAAATCATaGTATAATGTCACCCTGACA +
Preference number: 2 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQNPIKS*YNVTLT
Trigger: TGTCAGGGTGACATTATACCATGATTTTATAGGGTT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATATCTGGTGATCATGTaGCTAGAAGGAAATTGTTTT +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLYLVIM*LEGNCF
Trigger: AAAACAATTTCCTTCTAGCCACATGATCACCAGATA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATATAAGTATATATTTTaGGGTATAGGTGAACCTGCG +
Preference number: 2 (lower is better)
Translates to: SLEENLLECSIALLVTDLYKYIF*GIGEPA
Trigger: CGCAGGTTCACCTATACCCCAAAATATATACTTATA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GTCAGGGAGGTGACACAGTTGGACAAGCAGCACCCTTaGAGTCGGGGTTGGGGAGGAGTGCGTGAGATGTTT +
Preference number: 3 (lower is better)
Translates to: VREVTQLDKQHP*SRGWGGVREMF
Trigger: AAACATCTCACGCACTCCTCCCCAACCCCGACTCCAAGGGTGCTGCTTGTCCAACTGTGTCACCTCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GATCATAGCCTGCTCCTGGGGAACTATGCTAGTGGCTaGATAGCAAGCACTGACCTAGAGGTTGCTCCTAGG +
Preference number: 3 (lower is better)
Translates to: DHSLLLGNYASG*IASTDLEVAPR
Trigger: CCTAGGAGCAACCTCTAGGTCAGTGCTTGCTATCCAGCCACTAGCATAGTTCCCCAGGAGCAGGCTATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp ACACAGTTGGACAAGCAGCACCCTTGGAGTCGGGGTTaGGGAGGAGTGCGTGAGATGTTTCAAAAGGATCTC +
Preference number: 3 (lower is better)
Translates to: TQLDKQHPWSRG*GGVREMFQKDL
Trigger: GAGATCCTTTTGAAACATCTCACGCACTCCTCCCCAACCCCGACTCCAAGGGTGCTGCTTGTCCAACTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GCAGACATCCACTGCCTTTGGAAAAACATGGGGAGTTaGAGGGACGGATCTATAGCAGCAACTGCAGCAATG +
Preference number: 3 (lower is better)
Translates to: ADIHCLWKNMGS*RDGSIAATAAM
Trigger: CATTGCTGCAGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp CATGGGGAGTTGGAGGGACGGATCTATAGCAGCAACTaGAGCAATGAAGACAGGTCAGTTTTACACGCTAGA +
Preference number: 3 (lower is better)
Translates to: HGELEGRIYSSN*SNEDRSVLHAR
Trigger: TCTAGCGTGTAAAACTGACCTGTCTTCATTGCTGCAGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp TCCTTCTCCCGTAACGTCAGGGGCATACAGACTCAGTaGTGGACCAAGTTGAGGAACACCTTTCTTCATTTC +
Preference number: 3 (lower is better)
Translates to: SFSRNVRGIQTQ*WTKLRNTFLHF
Trigger: GAAATGAAGAAAGGTGTTCCTCAACTTGGTCCAGCACTGAGTCTGTATGCCCCTGACGTTACGGGAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp AGGCAGAAACCAAGAAGAGCTGAACGATTACTCCTCTaGCCAAGAGAGAGCAGAGAGAGAGGAAGGGAATTC +
Preference number: 3 (lower is better)
Translates to: RQKPRRAERLLL*PRESRERGREF
Trigger: GAATTCCCTTCCTCTCTCTCTGCTCTCTCTTGGCCAGAGGAGTAATCGTTCAGCTCTTCTTGGTTTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAAAGTTCCTCCCAAATaGGGAGCTGTAACCATCTGT +
Preference number: 3 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKKVPPK*GAVTIC
Trigger: ACAGATGGTTACAGCTCCCAATTTGGGAGGAACTTT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACTAGGGCAGCTGAAATaGTCAACATTGGAGAACTCT +
Preference number: 3 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKLGQLK*STLENS
Trigger: AGAGTTCTCCAATGTTGACAATTTCAGCTGCCCTAG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATTTAGGATTGGAGACTaGTGGGCTTGGTTTTTGCAG +
Preference number: 3 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKFRIGD*WAWFLQ
Trigger: CTGCAAAAACCAAGCCCACAAGTCTCCAATCCTAAA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp TCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTaGGGGGACCACATTACATCCCTCATAGTACCTGAT +
Preference number: 3 (lower is better)
Translates to: SLIFPLDCEILC*GDHITSLIVPD
Trigger: ATCAGGTACTATGAGGGATGTAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR TCA 72 bp CATTGCTTAGTGCTCAGTGTGTTGTTACAAAGAGCATaGGCTCAGAACCCAACTGGGAAGACTCTACCAGCT +
Preference number: 3 (lower is better)
Translates to: HCLVLSVLLQRA*AQNPTGKTLPA
Trigger: AGCTGGTAGAGTCTTCCCAGTTGGGTTCTGAGCTCATGCTCTTTGTAACAACACACTGAGCACTAAGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp GCTATAAGATACCAAAGAGTAGGCCCCTGGAGAGTTTaGGGCATCATGCTATCAAAGACAGCAATGGTGGCT +
Preference number: 3 (lower is better)
Translates to: AIRYQRVGPWRV*GIMLSKTAMVA
Trigger: AGCCACCATTGCTGTCTTTGATAGCATGATGCCTCAAACTCTCCAGGGGCCTACTCTTTGGTATCTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp CTGCCAACAGACTTTCAACCTGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: LPTDFQPGSPVI*PNWYLKVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTTGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
3UTR GCA 72 bp GGGGCATGGTCACCAGAACGAAGAGACTGGAGGATATaGCTGAATCTGATTTCTTTTATCCAGTTCCTCTCT +
Preference number: 3 (lower is better)
Translates to: GAWSPERRDWRI*LNLISFIQFLS
Trigger: AGAGAGGAACTGGATAAAAGAAATCAGATTCAGGCATATCCTCCAGTCTCTTCGTTCTGGTGACCATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp CAGCTGAATGATTGTTCAACTCCTTGCATTTCGGAGTaGGTCATTCTAACATTGGACAGCATGGATTCCCAC +
Preference number: 3 (lower is better)
Translates to: QLNDCSTPCISE*VILTLDSMDSH
Trigger: GTGGGAATCCATGCTGTCCAATGTTAGAATGACCCACTCCGAAATGCAAGGAGTTGAACAATCATTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp TCTGAAGAAGGGGCATGGTCACCAGAACGAAGAGACTaGAGGATATGCCTGAATCTGATTTCTTTTATCCAG +
Preference number: 3 (lower is better)
Translates to: SEEGAWSPERRD*RICLNLISFIQ
Trigger: CTGGATAAAAGAAATCAGATTCAGGCATATCCTCCAGTCTCTTCGTTCTGGTGACCATGCCCCTTCTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp TCACATCAGGAGTGGCAGAGGTGTTTACTAGGATTATaGTCCTTTCAGCTGTGTGTCTTAGAAGGATCTCCT +
Preference number: 3 (lower is better)
Translates to: SHQEWQRCLLGL*SFQLCVLEGSP
Trigger: AGGAGATCCTTCTAAGACACACAGCTGAAAGGATCATAATCCTAGTAAACACCTCTGCCACTCCTGATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp TACTTGCCTGAGGATCACCAGAAGGATTTTGTCTTGTaGAGAAGGCTAAAAGCAGAGTCATACTTTCTCTGC +
Preference number: 3 (lower is better)
Translates to: YLPEDHQKDFVL*RRLKAESYFLC
Trigger: GCAGAGAAAGTATGACTCTGCTTTTAGCCTTCTGCACAAGACAAAATCCTTCTGGTGATCCTCAGGCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp ATGGAATTAGCAAAGAAGAAGCTCAGACCAGGAGGCTaGCTAAGCTGTGAGGGTGAGGATATAATTAGCTTA +
Preference number: 3 (lower is better)
Translates to: MELAKKKLRPGG*LSCEGEDIISL
Trigger: TAAGCTAATTATATCCTCACCCTCACAGCTTAGCCAGCCTCCTGGTCTGAGCTTCTTCTTTGCTAATTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGCTTTTACAGTGGCTaGATAATTTTGGCTGAACTA +
Preference number: 3 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSFYSG*IILAEL
Trigger: TAGTTCAGCCAAAATTATCAAGCCACTGTAAAAGCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATTGTTCAAAGAGACATaGGCATTCTTTTACCCATGT +
Preference number: 3 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKLFKET*AFFYPC
Trigger: ACATGGGTAAAAGAATGCCAATGTCTCTTTGAACAA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp GAAAGCCTTCCCTGTCCTCCAAGCAGAATTAGTCCCTaGTTTCCCATCATGCTTCATTTGGACTTATTTGTA +
Preference number: 3 (lower is better)
Translates to: ESLPCPPSRISP*FPIMLHLDLFV
Trigger: TACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAATTCTGCTTGGAGGACAGGGAAGGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588515.5
3UTR TCA 72 bp AAAGTATTTGTAGACAGAGTTGGGCCAAAGTCTGCATaGAGCTATTGTCTCATTTGCAGGCTCCCTTTCTAC +
Preference number: 3 (lower is better)
Translates to: KVFVDRVGPKSA*SYCLICRLPFY
Trigger: GTAGAAAGGGAGCCTGCAAATGAGACAATAGCTTCATGCAGACTTTGGCCCAACTCTGTCTACAAATACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp TCTCGCTCCTCTTCCAGAGATTCAAGAGATTCTGGTTaGTATTTATCTTGTCTAGCAAGGCATTCACACTTG +
Preference number: 3 (lower is better)
Translates to: SRSSSRDSRDSG*YLSCLARHSHL
Trigger: CAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAAGAGGAGCGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp GAATTGTCCCAACTGAATGAAGCTCCCTTGCTCATTTaGAGCCACCAGTTAACAATGTCCTCTTATCTACAT +
Preference number: 3 (lower is better)
Translates to: ELSQLNEAPLLI*SHQLTMSSYLH
Trigger: ATGTAGATAAGAGGACATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp TGCAAAAGTATTTGTAGACAGAGTTGGGCCAAAGTCTaGATGAAGCTATTGTCTCATTTGCAGGCTCCCTTT +
Preference number: 3 (lower is better)
Translates to: CKSICRQSWAKV*MKLLSHLQAPF
Trigger: AAAGGGAGCCTGCAAATGAGACAATAGCTTCATGCAGACTTTGGCCCAACTCTGTCTACAAATACTTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp AGGAAATTAAGGTCCCATGAGGTAATAAAGGGATTGTaGTTAGGAGCTTACCAACCTGGGGGTCTTAGATAT +
Preference number: 3 (lower is better)
Translates to: RKLRSHEVIKGL*LGAYQPGGLRY
Trigger: ATATCTAAGACCCCCAGGTTGGTAAGCTCCTAACCACAATCCCTTTATTACCTCATGGGACCTTAATTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GACCCTAGTTCATGTTATGGTTTTCTTATATATAGCTaGTTGGGGGAGCCCTTGGGCAGTTATAAAGTGGAA +
Preference number: 3 (lower is better)
Translates to: DPSSCYGFLIYS*LGEPLGSYKVE
Trigger: TTCCACTTTATAACTGCCCAAGGGCTCCCCCAACCAGCTATATATAAGAAAACCATAACATGAACTAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAGACATCCACTGCCTTaGGAAAAACATGGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIRHPLP*EKHGEL
Trigger: CAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp AGAATGGGAAAGATACACATTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATCTTTCCTCTGGACTGT +
Preference number: 3 (lower is better)
Translates to: RMGKIHIALYCL*CGTSLIFPLDC
Trigger: ACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR TCA 72 bp TTTACGTCCCCACTGTCACCTGAGCCTTGTCCTTTTTaGCAAGATACATATATACAAGGGACAAGAACTTTC +
Preference number: 3 (lower is better)
Translates to: FTSPLSPEPCPF*QDTYIQGTRTF
Trigger: GAAAGTTCTTGTCCCTTGTATATATGTATCTTGTCAAAAAGGACAAGGCTCAGGTGACAGTGGGGACGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp AGCTATGATCTCAGGCAGAATGGGAAAGATACACATTaGCTTGTACTGTCTTTGATGTGGAACTTCTCTCAT +
Preference number: 3 (lower is better)
Translates to: SYDLRQNGKDTH*LVLSLMWNFSH
Trigger: ATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTCTGCCTGAGATCATAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR GCA 72 bp TCAGTATGCAACATGGCAGTACTATTGACAGTGAGGTaGTTTGGCATATCAGATAACTTTTCCAGTTGGTCA +
Preference number: 3 (lower is better)
Translates to: SVCNMAVLLTVR*FGISDNFSSWS
Trigger: TGACCAACTGGAAAAGTTATCTGATATGCCAAAGCACCTCACTGTCAATAGTACTGCCATGTTGCATACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp GCTGTATCCAAAACAATGGTGGACACCTGCCGTATTTaGTTTAAAATGGGTGGCACTGTTGTGTACAATTTA +
Preference number: 3 (lower is better)
Translates to: AVSKTMVDTCRI*FKMGGTVVYNL
Trigger: TAAATTGTACACAACAGTGCCACCCATTTTAAAGCAAATACGGCAGGTGTCCACCATTGTTTTGGATACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp TTTTTCAATACCTTTCAACCTGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTG +
Preference number: 3 (lower is better)
Translates to: FFNTFQPGSPVI*PNWYLKVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGGTATTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GACTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTAT +
Preference number: 3 (lower is better)
Translates to: DFQPGSPVICPN*YLKVRSPLIKY
Trigger: ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
3UTR CCA 72 bp ACATATTTGATCGGTGTGCTAATGAGGGGTAGAAATTaGTTAGGGACAGCGTTAAGACTGTCCTTAACAGTT +
Preference number: 3 (lower is better)
Translates to: TYLIGVLMRGRN*LGTALRLSLTV
Trigger: AACTGTTAAGGACAGTCTTAACGCTGTCCCTAACCAATTTCTACCCCTCATTAGCACACCGATCAAATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp ACCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTAT +
Preference number: 3 (lower is better)
Translates to: TFQPGSPVICPN*YLKVRSPLIKY
Trigger: ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGATAGCGCACATCTATTaGTCCACAGCCCACATTCTG +
Preference number: 3 (lower is better)
Translates to: SFYFEINRPDSISIKVWEIAHIY*STAHIL
Trigger: CAGAATGTGGGCTGTGGACAAATAGATGTGCGCTAT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGAATTCATAAAGAGCTaGTGTGTGCTTCCGTGCTCC +
Preference number: 3 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQEFIKS*CVLPCS
Trigger: GGAGCACGGAAGCACACACAAGCTCTTTATGAATTC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCA +
Preference number: 3 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKKVRSP*IKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR-3UTR CAA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCACAAAAGGGTTACTCCTaGGAAAGACAGAGTCAAGAA +
Preference number: 3 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPQKGYS*ERQSQE
Trigger: TTCTTGACTCTGTCTTTCCAAGGAGTAACCCTTTTG...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp AATGACACTAAGTTTCACATTGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATCTTTCCTCTGGACTGT +
Preference number: 3 (lower is better)
Translates to: NDTKFHIALYCL*CGTSLIFPLDC
Trigger: ACAGTCCAGAGGAAAGATGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
3UTR TCA 72 bp ATGATCCTTTCAGCTGTGTGTCTTAGAAGGATCTCCTaGAGCCCTGGGTTTGATATAGAAACCATAAGAAAA +
Preference number: 3 (lower is better)
Translates to: MILSAVCLRRIS*SPGFDIETIRK
Trigger: TTTTCTTATGGTTTCTATATCAAACCCAGGGCTTCAGGAGATCCTTCTAAGACACACAGCTGAAAGGATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp AAGAATAGCATGAATCCTTCCCTGAAGATAGACAAATaGACCAGATCCTCTCAAGGTCCCTTTCTGTCTTAT +
Preference number: 3 (lower is better)
Translates to: KNSMNPSLKIDK*TRSSQGPFLSY
Trigger: ATAAGACAGAAAGGGACCTTGAGAGGATCTGGTTCATTTGTCTATCTTCAGGGAAGGATTCATGCTATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAAGAGCAAATTAACATaGGCTTGTCAGTCTCTCCTC +
Preference number: 3 (lower is better)
Translates to: SFYFEINRPDSISIKVWEKSKLT*ACQSLL
Trigger: GAGGAGAGACTGACAAGCCAATGTTAATTTGCTCTT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAGTGTGCCAATAAACTaGCTGTTTGGTCGGCATATC +
Preference number: 3 (lower is better)
Translates to: SLEENLLECSIALLVTDLSVPIN*LFGRHI
Trigger: GATATGCCGACCAAACAGCAAGTTTATTGGCACACT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp ACTTGTTCCAAAAAGGAGTTAACATGGGATGAAGAATaGATTTGCTGTACTGCATTAGGCATCAGCAAGATG +
Preference number: 3 (lower is better)
Translates to: TCSKKELTWDEE*ICCTALGISKM
Trigger: CATCTTGCTGATGCCTAATGCAGTACAGCAAATTCATTCTTCATCCCATGTTAACTCCTTTTTGGAACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
3UTR TCA 72 bp GTACCCTTCTCTGTCATTCAGTACTTAATAATAAACTaGTCAAACCAGACTGTAGGAGTCCAGGAAAACCTT +
Preference number: 3 (lower is better)
Translates to: VPFSVIQYLIIN*SNQTVGVQENL
Trigger: AAGGTTTTCCTGGACTCCTACAGTCTGGTTTGATCAGTTTATTATTAAGTACTGAATGACAGAGAAGGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp CGTAGACTAATAAGAGTCATGGAATGTTTACATAAATaGTGCGTGAATTTCACAACCTTCCACCTTTTGAGG +
Preference number: 3 (lower is better)
Translates to: RRLIRVMECLHK*CVNFTTFHLLR
Trigger: CCTCAAAAGGTGGAAGGTTGTGAAATTCACGCAGCATTTATGTAAACATTCCATGACTCTTATTAGTCTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR GCA 72 bp CCCAAACATTATAAAGCCGAAGTATTAAGCATTCATTaGATTCCACTGACGCTAGGTGTCATCAAAGCTAAA +
Preference number: 3 (lower is better)
Translates to: PKHYKAEVLSIH*IPLTLGVIKAK
Trigger: TTTAGCTTTGATGACACCTAGCGTCAGTGGAATGCAATGAATGCTTAATACTTCGGCTTTATAATGTTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GAGTTTGAGGCATCATGCTATCAAAGACAGCAATGGTaGCTGTTTCCTTCAAGATATACTATGACTTTATCT +
Preference number: 3 (lower is better)
Translates to: EFEASCYQRQQW*LFPSRYTMTLS
Trigger: AGATAAAGTCATAGTATATCTTGAAGGAAACAGCCACCATTGCTGTCTTTGATAGCATGATGCCTCAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACCATTGGTCCAGCAATaGGCAAAATTTGTTTCTATG +
Preference number: 3 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIPLVQQ*AKFVSM
Trigger: CATAGAAACAAATTTTGCCAATTGCTGGACCAATGG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTGGGAAAGATACACATaGCCTTGTACTGTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKWERYT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATGCATCTACCTTAGTTaGTACAAGTGGTGCATCTTG +
Preference number: 3 (lower is better)
Translates to: SLEENLLECSIALLVTDLCIYLS*YKWCIL
Trigger: CAAGATGCACCACTTGTACAAACTAAGGTAGATGCA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAAGAACCAAAATAGCTaGAGGACACATGTCACCAAG +
Preference number: 3 (lower is better)
Translates to: SLEENLLECSIALLVTDLKNQNS*RTHVTK
Trigger: CTTGGTGACATGTGTCCTCAAGCTATTTTGGTTCTT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTGGGAAAGATACACATaGCCTTGTACTGTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFWERYT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
3UTR-3UTR CAA 90 bp TTAGTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTGGTTCACATTTTCTAAGTaGATGCGCAATGACACTAAG +
Preference number: 3 (lower is better)
Translates to: LVPDFPSCFIWTYLYDFWFTFSK*MRNDTK
Trigger: CTTAGTGTCATTGCGCATCAACTTAGAAAATGTGAA...CCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588515.5
3UTR-3UTR CAA 90 bp TTAGTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTGGACACTAAGTTTCACATaGCCTTGTACTGTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: LVPDFPSCFIWTYLYDFWTLSFT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGT...CCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588515.5
3UTR-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGACACTAAGTTTCACATaGCCTTGTACTGTCTTTGAT +
Preference number: 3 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKTLSFT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
3UTR-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAATTTCAGATGTTTCATaGCCACCAAACTACAGCCAT +
Preference number: 3 (lower is better)
Translates to: SLEENLLECSIALLVTDLISDVS*PPNYSH
Trigger: ATGGCTGTAGTTTGGTGGCAATGAAACATCTGAAAT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGGTTATGTTGTATTCTaGCCTCTTGATGAGAATGTA +
Preference number: 3 (lower is better)
Translates to: SLEENLLECSIALLVTDLGYVVF*PLDENV
Trigger: TACATTCTCATCAAGAGGCAAGAATACAACATAACC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp CTTAGAAGAATAGATGTTGATGATACATGGTATGTGTaGTCCAATCTCATGCAAACAGTATTTTCAGGGGAT +
Preference number: 3 (lower is better)
Translates to: LRRIDVDDTWYV*SNLMQTVFSGD
Trigger: ATCCCCTGAAAATACTGTTTGCATGAGATTGGATCACACATACCATGTATCATCAACATCTATTCTTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp GGAAAACTTGATTGCATCTACCTTAGTTTGTACAAGTaGTGCATCTTGGAAAATAGATTTCCTGAACAGTTT +
Preference number: 3 (lower is better)
Translates to: GKLDCIYLSLYK*CILENRFPEQF
Trigger: AAACTGTTCAGGAAATCTATTTTCCAAGATGCACCACTTGTACAAACTAAGGTAGATGCAATCAAGTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp ATAGAACTGTTCTTAGGGAAGGTTGACATAATCACATaGTTAAAATCCCAAGGGACTCAATATTCCTATACT +
Preference number: 3 (lower is better)
Translates to: IELFLGKVDIIT*LKSQGTQYSYT
Trigger: AGTATAGGAATATTGAGTCCCTTGGGATTTTAACCATGTGATTATGTCAACCTTCCCTAAGAACAGTTCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CCA 72 bp AGAAACATTATTTGCAAAAGTATTTGTAGACAGAGTTaGGCCAAAGTCTGCATGAAGCTATTGTCTCATTTG +
Preference number: 3 (lower is better)
Translates to: RNIICKSICRQS*AKVCMKLLSHL
Trigger: CAAATGAGACAATAGCTTCATGCAGACTTTGGCCCAACTCTGTCTACAAATACTTTTGCAAATAATGTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR TCA 72 bp TCATTACTGAAGCCTTTGACAATCTCAATGAGTTCTTaGAATGTCAAAAGCTCGTTAATTTCCTTTATCCCA +
Preference number: 3 (lower is better)
Translates to: SLLKPLTISMSS*NVKSSLISFIP
Trigger: TGGGATAAAGGAAATTAACGAGCTTTTGACATTTCAAGAACTCATTGAGATTGTCAAAGGCTTCAGTAATGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACCGGCGAGAACCCGCTaGACTGGGGCTGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKPARTR*TGAGCP
Trigger: CGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGCCCGAGTGGGCGGCTaGAGGTCCCGCCGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEARVGG*RSRRRE
Trigger: TTCTCGCCGGCGGGACCTGCAGCCGCCCACTCGGGC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTCCGTAACAACCCCTaGCCGTTGCCGCGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELRNNP*PLPRLC
Trigger: GCACAGGCGCGGCAACGGGCAGGGGTTGTTACGGAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGGGATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLGISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATCCC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGCTGCTGGGGGTCCTaGACCCCAACCCAGCCTAGA +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSCWGS*TPTQPR
Trigger: TCTAGGCTGGGTTGGGGTGCAGGACCCCCAGCAGCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCTCGGAAACATCGGCATaGCACCAGACGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGSETSA*HQTADD
Trigger: ATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGA...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAAGCACCGTCCAGGCTaGGGTCCCCGGGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYKHRPG*GPRVAC
Trigger: ACAGGCCACCCGGGGACCTCAGCCTGGACGGTGCTT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGAGGAGGAGCTGCCCTTaGTTCCAGCAAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLRRSCP*FQQAPS
Trigger: AGAGGGGGCTTGCTGGAATCAAGGGCAGCTCCTCCT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGCTGCTGCTCCCGGCTaGGATGCTGAAGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEAAAPG*DAEGFG
Trigger: CCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACTGAGATCGTGCCACTaGACTCCAGCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKLRSCH*TPASSL
Trigger: CAGGCTGGAGGCTGGAGTGCAGTGGCACGATCTCAG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTTCAGGGGTCCGCAGTaGAGTGGGCGCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEFRGPQ*SGRQGL
Trigger: AAGACCCTGGCGCCCACTCCACTGCGGACCCCTGAA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GACCTGGCACTGATCTTCTCACTGGTAGATCATACCTaGGACAAACGAGCTCCTCCACACAGAAAGGCCACC +
Preference number: 4 (lower is better)
Translates to: DLALIFSLVDHT*DKRAPPHRKAT
Trigger: GGTGGCCTTTCTGTGTGGAGGAGCTCGTTTGTCCAAGGTATGATCTACCAGTGAGAAGATCAGTGCCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGGTGGGAGGATCACTTaGGCTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLGGRIT*AQEFET
Trigger: GGTCTCGAACTCCTGAGCTCAAGTGATCCTCCCACC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCAGGCCTCTTCCGAAGTaGTGCACGAACCTCTTTACA +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGRPLPK*CTNLFT
Trigger: TGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCT...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGACCTGGCCCATGGTGTaGAGCAATCGCCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLTWPMV*SNRQTV
Trigger: GACTGTCTGGCGATTGCTGCACACCATGGGCCAGGT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCCGCTGCACTGGGGCTaGGTGTCCGTGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKPLHWG*VSVASS
Trigger: GCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTCCCGGCTGCGATGCTaGAGGCTTTGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSRLRC*RLWDPI
Trigger: GATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAAGCACCGTCCAGGCTaGGGTCCCCGGGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIKHRPG*GPRVAC
Trigger: ACAGGCCACCCGGGGACCTCAGCCTGGACGGTGCTT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGCGTCTCGGAGGGGCTaGGCGCTCCGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLASRRG*ALRNCR
Trigger: CCTGCAGTTGCGGAGCGCTCAGCCCCTCCGAGACGC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGAATTCAGGGCTGTCTaGAGAAGGGGCATGGTCACC +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLEFRAV*RRGMVT
Trigger: GGTGACCATGCCCCTTCTTCAGACAGCCCTGAATTC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCCCCAGCCTCAGCCTaGCCAGCGCGCCGCGCTAGC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSPASA*PARRAS
Trigger: GCTAGCGCGGCGCGCTGGGCAGGCTGAGGCTGGGGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCAGTGCCCTTCAGGTaGACGGCTGGAGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYPVPFR*TAGEVP
Trigger: GGGAACCTCTCCAGCCGTCCACCTGAAGGGCACTGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTTCAGGGGTCCGCAGTaGAGTGGGCGCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYFRGPQ*SGRQGL
Trigger: AAGACCCTGGCGCCCACTCCACTGCGGACCCCTGAA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTCGGAAACATCGGCATaGCACCAGACGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLSETSA*HQTADD
Trigger: ATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTCAGGAAGCCCGCCCTaGCCCCTTGGCTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSGSPP*PLGLRT
Trigger: AGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGGGGCTGGGTGTCCGTaGCTTCAAGCCCGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKGAGCP*LQARCS
Trigger: TGAACACCGGGCTTGAAGCCACGGACACCCAGCCCC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGCAACCTCCGCCTGCTaGGTTGAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKATSAC*VEAILL
Trigger: CAGGAGAATTGCTTCAACCCAGCAGGCGGAGGTTGC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCATAGTAGGCCTAGCTaGAACTGGCCTGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLHSRPS*NWPGLG
Trigger: TCCCAAACCAGGCCAGTTTCAGCTAGGCCTACTATG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTCCCGGCTGCGATGCTaGAGGCTTTGGGACCCCATC +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYSRLRC*RLWDPI
Trigger: GATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCCCCGGGTGGCCTGTaGAGAGGGGATCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSPGGL*RGDLNR
Trigger: CCTATTCAGATCCCCTCTTCACAGGCCACCCGGGGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCCCCCAAGTCCCAGATaGTCAGGTAGCTACAAGTGT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLPPSPR*SGSYKC
Trigger: ACACTTGTAGCTACCTGATCATCTGGGACTTGGGGG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGGCCCCTGGAGAGTTTaGGGCATCATGCTATCAAAG +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLGPWRV*GIMLSK
Trigger: CTTTGATAGCATGATGCCTCAAACTCTCCAGGGGCC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGGCTGCAGTGGGCCATaGTCATGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKGCSGP*SCHCTP
Trigger: TGGAGTGCAGTGGCATGATCATGGCCCACTGCAGCC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCCCTATATGGGGGTCTaGCGTACCTATCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEPYMGV*RTYQLG
Trigger: CCCCAACTGATAGGTACGGCAGACCCCCATATAGGG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGTTGCTTCTCGATGCTaGTCCCAGTGGTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKVASRC*SQWSLS
Trigger: TGACAAGGACCACTGGGAGCAGCATCGAGAAGCAAC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGAGTAATCCCACGCTaGCCCCTTTCCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYRVIPR*PLSQGA
Trigger: AGCCCCCTGGGAAAGGGGCCAGCGTGGGATTACTCT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAGAGTAATCCCACGCTaGCCCCTTTCCCAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKRVIPR*PLSQGA
Trigger: AGCCCCCTGGGAAAGGGGCCAGCGTGGGATTACTCT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCCGCCCTGGCCCCTTaGCTTGCGAACTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPALAP*LANWAF
Trigger: GAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATCCTCCTCGGTGCAGTaGCTCGGCGCACAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEISSSVQ*LGAQVP
Trigger: TGGCACCTGTGCGCCGAGCCACTGCACCGAGGAGGA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp AGCAGACATCCACTGCCTTTGGAAAAACATGGGGAGTaGGAGGGACGGATCTATAGCAGCAACTGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SRHPLPLEKHGE*EGRIYSSNCSN
Trigger: ATTGCTGCAGTTGCTGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAATATCTTGGATCTGCTaGTCACACCTGGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLISWIC*SHLAHG
Trigger: ACCATGGGCCAGGTGTGATCAGCAGATCCAAGATAT...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCGCATCAGCAAGATGGTaGCCTTGTATGTTGAATTTC +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGASARW*PCMLNF
Trigger: GAAATTCAACATACAAGGTCACCATCTTGCTGATGC...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCTCTGTGCCTGTTTATaGATGACCTCGGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLLCACL*MTSEVP
Trigger: TGGCACTTCCGAGGTCATTCATAAACAGGCACAGAG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATGGCACACTTCACCTaGTGTCCTCTTCTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLMAHFT*CPLLPS
Trigger: TGAGGGAAGAAGAGGACATCAGGTGAAGTGTGCCAT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACAGTCTTTGTGGCTGTaGTTGGATAGGAGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLQSLWL*LDRRAF
Trigger: AAAGGCCCTCCTATCCAATCACAGCCACAAAGACTG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAATGCGTTGTTGTCTCTaGTCTTCCCACAGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKMRCCL*SSHSVG
Trigger: CCCTACACTGTGGGAAGAGCAGAGACAACAACGCAT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACCTGGCCCATGGTGTaGAGCAATCGCCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYTWPMV*SNRQTV
Trigger: GACTGTCTGGCGATTGCTGCACACCATGGGCCAGGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATGTCTGTGTGTAGACTaGTCGAGTTCCAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKCLCVD*SSSRGT
Trigger: TGTTCCCCTGGAACTCGAGCAGTCTACACACAGACA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGCTGCTGCTCCCGGCTaGGATGCTGAAGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTAAAPG*DAEGFG
Trigger: CCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAACAACCCCTGCCCGTTaGCGCGCCTGTGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLTTPAR*RACAGR
Trigger: TCGCCCTGCACAGGCGCGGCAACGGGCAGGGGTTGT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTTCAGGTGGACGGCTaGAGAGGTTCCCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLQVDG*RGSRGK
Trigger: CTTCCCGCGGGAACCTCTCCAGCCGTCCACCTGAAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGGTCCGCAGTGGAGTaGGCGCCAGGGTCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGSAVE*APGSSE
Trigger: CTCCGAAGACCCTGGCGCCCACTCCACTGCGGACCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATTTCAGGGGTCCGCAGTaGAGTGGGCGCCAGGGTCTT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHFRGPQ*SGRQGL
Trigger: AAGACCCTGGCGCCCACTCCACTGCGGACCCCTGAA...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCTGCTGATCACACCTaGCCCATGGTGTGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQESADHT*PMVCSN
Trigger: ATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCAGAACAAGTTTGGGTaGGTACAGAGGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEQNKFG*VQRGLS
Trigger: GCTGAGACCCCTCTGTACCCACCCAAACTTGTTCTG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCTGTGGTATATTGCCTaGGGGAACAGCCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYLWYIA*GNSLPL
Trigger: CAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACCCGCCCTGGCCCCTTaGCTTGCGAACTGGGCATTC +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLPALAP*LANWAF
Trigger: GAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGACCCCATCAACGTCTaGATGTGGCTGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKDPINV*MWLPAF
Trigger: GAAGGCAGGCAGCCACATCCAGACGTTGATGGGGTC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACGTCCACCTGGGCAATaGGTAGGGCTAGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTRPPGQ*VGLEAR
Trigger: CCTGGCCTCTAGCCCTACCCATTGCCCAGGTGGACG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTGCCACGTTAGACCATaGTGCCAGTGCCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYCHVRP*CQCPSG
Trigger: ACCTGAAGGGCACTGGCATCATGGTCTAACGTGGCA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCAGTTTTCGTAGAGCTTaGCAGTTGAACAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGSFRRA*QLNNCL
Trigger: CAAGCAATTGTTCAACTGTCAAGCTCTACGAAAACT...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGTATTAGAGGATCCTaGGGAAGCCTGGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYGIRGS*GSLGRR
Trigger: TCGCCTTCCCAGGCTTCCTCAGGATCCTCTAATACC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGGCTTTCACTTCCACTaGTCCTTGAGGATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLGFHFH*SLRIEA
Trigger: AGCTTCAATCCTCAAGGATCAGTGGAAGTGAAAGCC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTTGTTACAAAGAGCATaGGCTCAGAACCCAACTGGG +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLLLQRA*AQNPTG
Trigger: CCCAGTTGGGTTCTGAGCTCATGCTCTTTGTAACAA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCTGAATTGTCCCAACTaGATGAAGCTCCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLLNCPN*MKLPCS
Trigger: TGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATACCCTTTTCGTACCTaGACCCTGAATTGTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLYPFRT*TLNCPN
Trigger: GTTGGGACAATTCAGGGTTCAGGTACGAAAAGGGTA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAAAGGCCTGCGTCCATaGGAAGATGTGCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKKGLRP*EDVLLD
Trigger: ATCTAGAAGCACATCTTCGCATGGACGCAGGCCTTT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCGCCAGGGGTTCTCTaGCTTCAGCACCCAGATATT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYPPGVL*LQHPDI
Trigger: AATATCTGGGTGCTGAAGGCAGAGAACCCCTGGCGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCAGTGCCCTTCAGGTaGACGGCTGGAGAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPVPFR*TAGEVP
Trigger: GGGAACCTCTCCAGCCGTCCACCTGAAGGGCACTGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGTTAAAGACCTCCTTTaGCACCTGCTGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLVKDLL*HLLKTA
Trigger: TGCAGTCTTCAGCAGGTGCCAAAGGAGGTCTTTAAC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATCACACCTGGCCCATaGTGTGCAGCAATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYITPGP*CAAIAR
Trigger: TCTGGCGATTGCTGCACACCATGGGCCAGGTGTGAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACATTTGCTCCATCGGTaGGTATCCTCTGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKHLLHR*VSSVSS
Trigger: AGAGCTTACAGAGGATACCCACCGATGGAGCAAATG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATCAGGAAGCCCGCCCTaGCCCCTTGGCTTGCGAACT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLSGSPP*PLGLRT
Trigger: AGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGCCGTACCTATCAGTTaGGGGCAGCTCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYAVPIS*GQLMRL
Trigger: GAGCCTCATGAGCTGCCCCCAACTGATAGGTACGGC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACTGTAACGCTGCTTTaGCGATCCAGCCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYTVTLL*RSSPPL
Trigger: TAGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATCTTCTTTTGACATCTaGAAGAGCAGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLSSFDI*KSRREG
Trigger: GCCTTCCCTCCTGCTCTTCCAGATGTCAAAAGAAGA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGAGAACCCGCTGCACTaGGGCTGGGTGTCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPENPLH*GWVSVA
Trigger: AGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACCCAGACCTTGTCTTTaGGTAGGACTACATAGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLPRPCL*VGLHSG
Trigger: ACCACTATGTAGTCCTACCCAAAGACAAGGTCTGGG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACCTTGGAGTCGGGGTTaGGGAGGAGTGCGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIPWSRG*GGVREM
Trigger: CATCTCACGCACTCCTCCCCAACCCCGACTCCAAGG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGTTAGCAGTTGGATTTaGATTCTCAACACGCACTCC +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLVSSWI*ILNTHS
Trigger: GGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAAC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCAGCCTCCCGCTGGCTaGGTAATGGCTTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYQPPAG*VMALNQ
Trigger: TTGATTCAAAGCCATTACTCAGCCAGCGGGAGGCTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGCACCTGCTGAAGACTaGAGTGGGAGTAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLAPAED*SGSNLK
Trigger: TTTTAGATTACTCCCACTGCAGTCTTCAGCAGGTGC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTGTTGTCTCCAGTCTaGAGGCATTTTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELLSPV*RHFTTA
Trigger: AGCTGTGGTAAAATGCCTGCAGACTGGAGACAACAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATTTCCTTCATACGGCTaGTGCTCCCGGCTGCGATGC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTFPSYG*CSRLRC
Trigger: GCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGCCATCTCAGCTCACTaGAACCTCCGCCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITAISAH*NLRLLG
Trigger: ACCCAGCAGGCGGAGGTTGCAGTGAGCTGAGATGGC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTTCTCTTCCCACAGCTaGTGGGGGTCCTGCACCCCA +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEFSSHS*WGSCTP
Trigger: TGGGGTGCAGGACCCCCAGCAGCTGTGGGAAGAGAA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACTTCAGGTGGACGGCTaGAGAGGTTCCCGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLQVDG*RGSRGK
Trigger: CTTCCCGCGGGAACCTCTCCAGCCGTCCACCTGAAG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAACCCCATGCCAGCTGTaGGTCATTCTGGGGGACGGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPTPCQL*VILGDG
Trigger: CCCGTCCCCCAGAATGACCCACAGCTGGCATGGGGT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCACTGTAATCTCCTTTaGGGCTACCGGCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYHCNLL*GYRPLV
Trigger: CACAAGTGGCCGGTAGCCCCAAAGGAGATTACAGTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCACTGTAATCTCCTTTaGGGCTACCGGCCACTTGTG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKHCNLL*GYRPLV
Trigger: CACAAGTGGCCGGTAGCCCCAAAGGAGATTACAGTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGAACAGCCTCCCGCTaGCTGAGTAATGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYGTASR*LSNGFE
Trigger: TTCAAAGCCATTACTCAGCCAGCGGGAGGCTGTTCC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTGTGGTATATTGCCTaGGGGAACAGCCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLWYIA*GNSLPL
Trigger: CAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCGGTCAGGACGCTGTaGTATATTGCCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPVRTL*YIAWGN
Trigger: GTTCCCCCAGGCAATATACCACAGCGTCCTGACCGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGGGTTGTCTCTAATTTaGAAGGAAAAGCGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLGLSLI*KEKRSC
Trigger: ACAGGACCGCTTTTCCTTCCAAATTAGAGACAACCC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGGCGATGTTTTTGCTaGCCTGTTGCACGTACTCGG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKWRCFC*PVARTR
Trigger: CCGAGTACGTGCAACAGGCCAGCAAAAACATCGCCA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGCCGTACCTATCAGTTaGGGGCAGCTCATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTAVPIS*GQLMRL
Trigger: GAGCCTCATGAGCTGCCCCCAACTGATAGGTACGGC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGACCCCATCAACGTCTaGATGTGGCTGCCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTDPINV*MWLPAF
Trigger: GAAGGCAGGCAGCCACATCCAGACGTTGATGGGGTC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGCTGAGGTCCCCGGGTaGCCTGTGAAGAGGGGATCT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPAEVPG*PVKRGS
Trigger: AGATCCCCTCTTCACAGGCCACCCGGGGACCTCAGC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCTTGACTTGTGCCATCTaGGAACTTTGCAAAATAAGT +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGLTCAI*ELCKIS
Trigger: ACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAA...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTCAGACCAGGAGGCTaGCTAAGCTGTGAGGGTGAG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLRPGG*LSCEGE
Trigger: CTCACCCTCACAGCTTAGCCAGCCTCCTGGTCTGAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGACAAGCAGCACCCTTaGAGTCGGGGTTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKDKQHP*SRGWGG
Trigger: TCCTCCCCAACCCCGACTCCAAGGGTGCTGCTTGTC...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GGCAGGGGAACACCTGAAACCCATATAAGTAGGGCTTaGATGGAATTAGCAAAGAAGAAGCTCAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GRGTPETHISRA*MELAKKKLRPG
Trigger: TCCTGGTCTGAGCTTCTTCTTTGCTAATTCCATCAAAGCCCTACTTATATGGGTTTCAGGTGTTCCCCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp CTGAACCCTGAATTGTCCCAACTGAATGAAGCTCCCTaGCTCATTTGCAGCCACCAGTTAACAATGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LNPELSQLNEAP*LICSHQLTMSS
Trigger: AGAGGACATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAGGGTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GTAGGCTTCATACCCTTTTCGTACCTGAACCCTGAATaGTCCCAACTGAATGAAGCTCCCTTGCTCATTTGC +
Preference number: 4 (lower is better)
Translates to: VGFIPFSYLNPE*SQLNEAPLLIC
Trigger: GCAAATGAGCAAGGGAGCTTCATTCAGTTGGGACAATTCAGGGTTCAGGTACGAAAAGGGTATGAAGCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATGGGAGAAACTGCCCATaGGGTTTCGGAGAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHGRNCP*GFGERS
Trigger: ACTACGCTCTCCGAAACCTCATGGGCAGTTTCTCCC...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACCAAGATCCGCAATTTaGCAAGTCTTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLPRSAI*QVFQNW
Trigger: CCAATTTTGGAAGACTTGTCAAATTGCGGATCTTGG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCCCCGGGTGGCCTGTaGAGAGGGGATCTGAATAGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSPGGL*RGDLNR
Trigger: CCTATTCAGATCCCCTCTTCACAGGCCACCCGGGGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCAGTCCTTACTGACCTaGACCAGATGCCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKQSLLT*TRCLFH
Trigger: GTGGAAAAGGCATCTGGTTCAGGTCAGTAAGGACTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACTGGTCCTAGGGGGCTaGGGTGTGGAAAATGGAAGG +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKILVLGG*GVENGR
Trigger: CCTTCCATTTTCCACACCTCAGCCCCCTAGGACCAG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAGGTGGAAGTTACAGTaGGCCAAGATAGCGCTACTG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKRWKLQ*AKIALL
Trigger: CAGTAGCGCTATCTTGGCTCACTGTAACTTCCACCT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCTCCGCCTGCTGGGTTaGAGCAATTCTCCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKLRLLG*SNSPAS
Trigger: TGAGGCAGGAGAATTGCTTCAACCCAGCAGGCGGAG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGACGCTGTGGTATATTaGCTGGGGGAACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITDAVVY*LGEQPP
Trigger: GGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCTTGGCGATGTTTTTaGTGGCCTGTTGCACGTACT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYPWRCF*WPVART
Trigger: AGTACGTGCAACAGGCCAGCAAAAACATCGCCAAGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTTCCTTCATACGGCTaGTGCTCCCGGCTGCGATGC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLFPSYG*CSRLRC
Trigger: GCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCTATAAGCCATTGAACTaGATGAAAAGCCAATATGGT +
Preference number: 4 (lower is better)
Translates to: HILCCRCHCIVSGDWARGYKPLN*MKSQYG
Trigger: ACCATATTGGCTTTTCATGCAGTTCAATGGCTTATA...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTGAGAGTTTCATCTTaGTTTTCCTATGGACCGTCC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELRVSS*FSYGPS
Trigger: GGACGGTCCATAGGAAAAGCAAGATGAAACTCTCAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGCCAACAGACTTGTTaGCATGGGAACCAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKCQQTC*HGNQCR
Trigger: TCTGCACTGGTTCCCATGGCAACAAGTCTGTTGGCA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAATCTATAGCAGCAACTaGAGCAATGAAGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLIYSSN*SNEDRS
Trigger: TGACCTGTCTTCATTGCTGCAGTTGCTGCTATAGAT...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGCCCATTTCTTACATTaGTTAGTGCTCAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKAHFLH*LVLSVL
Trigger: CAACACACTGAGCACTAAGCAATGTAAGAAATGGGC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGAGGGACTCACCACATTaGCTTGTACTGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQERDSPH*LVLSLM
Trigger: CATCAAAGACAGTACAAGGCAATGTGGTGAGTCCCT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCGGAAACATCGGCATaGCACCAGACGGCCGATGAT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSETSA*HQTADD
Trigger: ATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGACAGTCTGGCAGGTTaGAGAGTAATCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTDSLAG*RVIPRW
Trigger: CCAGCGTGGGATTACTCTCCAACCTGCCAGACTGTC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATCACACCTGGCCCATaGTGTGCAGCAATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTITPGP*CAAIAR
Trigger: TCTGGCGATTGCTGCACACCATGGGCCAGGTGTGAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACCGGTCAGGACGCTGTaGTATATTGCCTGGGGGAAC +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIPVRTL*YIAWGN
Trigger: GTTCCCCCAGGCAATATACCACAGCGTCCTGACCGG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGCATTGGGACTGACTaGCTTCGAGACATACTGGAC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSIGTD*LRDILD
Trigger: GTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACAGCCCTCCCCTATATaGGGGTCTGCCGTACCTATC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITQPSPI*GSAVPI
Trigger: GATAGGTACGGCAGACCCCCATATAGGGGAGGGCTG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGCTTCTCGCAGACAATaGCCTCCTTTGGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYASRRQ*PPLGKV
Trigger: AACCTTACCCAAAGGAGGCCATTGTCTGCGAGAAGC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGGTTGGGGGAGCCCTTaGGCAGTTATAAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKGWGSP*AVIKWK
Trigger: TTTCCACTTTATAACTGCCCAAGGGCTCCCCCAACC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCCACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTGAGGATCACCAGCTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: STFKPNKSPLSGKTEDHQLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...CTGGTGATCCTCAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAGGTAGCTGATGCCTaGAGGAAGACTAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAQVADA*RKTSWS
Trigger: TGACCAGCTAGTCTTCCTCCAGGCATCAGCTACCTG...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCTGAAGAAGGGGCATaGTCACCAGAACGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSEEGA*SPERRD
Trigger: GTCTCTTCGTTCTGGTGACCATGCCCCTTCTTCAGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGAACGATTACTCCTCTaGCCAAGAGAGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKERLLL*PRESRE
Trigger: CTCTCTGCTCTCTCTTGGCCAGAGGAGTAATCGTTC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATATCCAAAACAATGGTaGACACCTGCCGTATTTGCT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKYPKQW*TPAVFA
Trigger: AGCAAATACGGCAGGTGTCCACCATTGTTTTGGATA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GAACAGGAAGTACTAAAGAAGTGGCTCAGGACAATGTaGTCACATCAGGAGTGGCAGAGGTGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: EQEVLKKWLRTM*SHQEWQRCLLG
Trigger: TCCTAGTAAACACCTCTGCCACTCCTGATGTGACAACATTGTCCTGAGCCACTTCTTTAGTACTTCCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GAAAGTTCCTCCCAAATTGGGAGCTGTAACCATCTGTaGATACTCAAGGCTCTCCGAACAGCTATCACTCTA +
Preference number: 4 (lower is better)
Translates to: ESSSQIGSCNHL*ILKALRTAITL
Trigger: TAGAGTGATAGCTGTTCGGAGAGCCTTGAGTATCAACAGATGGTTACAGCTCCCAATTTGGGAGGAACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGGAGAAACTGCCCATaGGGTTTCGGAGAGCGTAGT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGRNCP*GFGERS
Trigger: ACTACGCTCTCCGAAACCTCATGGGCAGTTTCTCCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGATAAGGGCTTTGGACTaGTTGTCAGAAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEIRALD*LSESHK
Trigger: TTTGTGGCTTTCTGACAATCAGTCCAAAGCCCTTAT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGTATTAGAGGATCCTaGGGAAGCCTGGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGIRGS*GSLGRR
Trigger: TCGCCTTCCCAGGCTTCCTCAGGATCCTCTAATACC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGCTGGCCCATCAGGCTaGACCCTAGTAACAAAGATA +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYAGPSG*TLVTKI
Trigger: TATCTTTGTTACTAGGGTTCAGCCTGATGGGCCAGC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000651989.2
CDS-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATCTCCGAAGCTTTCCTaGAAACCTACAATTAATGTC +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSPKLS*KPTINV
Trigger: GACATTAATTGTAGGTTTTCAGGAAAGCTTCGGAGA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCTGAAGCCCTGGGTTTaGTATAGAAACCATAAGAAA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLLKPWV*YRNHKK
Trigger: TTTCTTATGGTTTCTATATCAAACCCAGGGCTTCAG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACAGGAGGCTGAGACATaGGAATTGCCTGAACTCGGG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLQEAET*ELPELG
Trigger: CCCGAGTTCAGGCAATTCTCATGTCTCAGCCTCCTG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACCGCACCCGGCTTCGTaGCACTCTTTATGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLPHPAS*HSLCEL
Trigger: CAGCTCACATAAAGAGTGTCACGAAGCCGGGTGCGG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGTGTGGGCAAAAGCTaGAATATAAAACACAGCGAA +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSVGKS*NIKHSE
Trigger: TTCGCTGTGTTTTATATTTCAGCTTTTGCCCACACT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGCTTTCTTTCTACTTTaGGATCAACAGGCCAGATTC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEAFFLL*DQQARF
Trigger: GAATCTGGCCTGTTGATCTCAAAGTAGAAAGAAAGC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACCCAGATATTCCCACTaGAAGGAGAGAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLPRYSH*KERGWG
Trigger: TCCCCAGCCTCTCTCCTTTCAGTGGGAATATCTGGG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGCAAGCCCCCGTGCTTTaGGGAGATGATCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEQAPVL*GDDHSL
Trigger: CAGGCTATGATCATCTCCTCAAAGCACGGGGGCTTG...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATATCAAGCCTTAAGATaGAGTTCCTTCCTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLYQALR*SSFLQK
Trigger: TTTCTGGAGGAAGGAACTTCATCTTAAGGCTTGATA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACTTATACAACCCCATaGCAGCTGTGGGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYTYTTP*QLWVIL
Trigger: CAGAATGACCCACAGCTGGCATGGGGTTGTATAAGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGTGGTGGATTGTGCTaGAACTGGCAATGGAGTACA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSGGLC*NWQWST
Trigger: TGTACTCCATTGCCAGTTGCAGCACAATCCACCACT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCTGTGGGAAAGATGGTaGAATCCTGTTACCCCACAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKLWERW*NPVTPQ
Trigger: TTGTGGGGTAACAGGATTGCACCATCTTTCCCACAG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGACGCTGTGGTATATTaGCTGGGGGAACAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPDAVVY*LGEQPP
Trigger: GGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAAGCAATACCTTTCCTaGCACCCATCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKKQYLS*HPSSTA
Trigger: AGCAGTGGATGATGGGTGGCAGGAAAGGTATTGCTT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTGCTTTATGTTGTCTaGCTGAGAGTTTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELLYVV*LRVSSC
Trigger: GCAAGATGAAACTCTCAGGCAGACAACATAAAGCAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAGCTGGGATTATAGGTaGCCGCCACCATGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITSWDYR*PPPCSA
Trigger: AGCTGAGCATGGTGGCGGGCACCTATAATCCCAGCT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTGAAGCAATTCTCCTaGCTCAGCCTCCCCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYLKQFS*LSLPSN
Trigger: GTTACTGGGGAGGCTGAGGCAGGAGAATTGCTTCAA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGTTAAAGACCTCCTTTaGCACCTGCTGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYVKDLL*HLLKTA
Trigger: TGCAGTCTTCAGCAGGTGCCAAAGGAGGTCTTTAAC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGATTGTGCTGCAACTaGCAATGGAGTACACATGCT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYGLCCN*QWSTHA
Trigger: AGCATGTGTACTCCATTGCCAGTTGCAGCACAATCC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATCAACACGCACTCCATaGCTTGGCTTACCCACCAAA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASTRTP*LGLPTK
Trigger: TTTGGTGGGTAAGCCAAGCCATGGAGTGCGTGTTGA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCTCCCATGGTACGCCTaGAGAAAAAGGACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYLPWYA*RKRTRY
Trigger: ATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCATTTGCTCCATCGGTaGGTATCCTCTGTAAGCTCT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYHLLHR*VSSVSS
Trigger: AGAGCTTACAGAGGATACCCACCGATGGAGCAAATG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCTTGGCTTGCGAACTaGGCATTCACCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPWLAN*AFTTAS
Trigger: GGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCCTTGGCTTGCGAACTaGGCATTCACCACAGCATCC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKPWLAN*AFTTAS
Trigger: GGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAACATGGCCATTTCTGTaGCGCTCACCAGGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPTWPFL*RSPGSR
Trigger: CCGACTCCCTGGTGAGCGCCACAGAAATGGCCATGT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACAGCCCTCCCCTATATaGGGGTCTGCCGTACCTATC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPQPSPI*GSAVPI
Trigger: GATAGGTACGGCAGACCCCCATATAGGGGAGGGCTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAACTGTAACGCTGCTTTaGCGATCCAGCCCTCCCCTA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKITVTLL*RSSPPL
Trigger: TAGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAAAATGTTGCTTTGCTaGGACGGGGTCCTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYKMLLC*DGVLSN
Trigger: GTTAGACAGGACCCCGTCCCAGCAAAGCAACATTTT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATCCCGCCTCCCAAGTaGATAAGGATTCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTIPPPK*IRIPLA
Trigger: GGCCAATGGAATCCTTATCCACTTGGGAGGCGGGAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGAAAGACTTTCAACCTaGATCTCCAGTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEERLST*ISSNMP
Trigger: GGGCATATTACTGGAGATCCAGGTTGAAAGTCTTTC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGAACAGACTTTCAACCTaGATCTCCAGTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQENRLST*ISSNMP
Trigger: GGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATACAGACTCAGTGCTaGACCAAGTTGAGGAACACC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYIQTQC*TKLRNT
Trigger: GGTGTTCCTCAACTTGGTCCAGCACTGAGTCTGTAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACAAAGACAGCAATGGTaGCTGTTTCCTTCAAGATAT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKQRQQW*LFPSRY
Trigger: ATATCTTGAAGGAAACAGCCACCATTGCTGTCTTTG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGTAATCCCCGTACTTTaGGAGTCCGAGGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIVIPVL*ESEAGG
Trigger: TCCACCTGCCTCGGACTCCCAAAGTACGGGGATTAC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAATCATAGCCTGCTCCTaGGGAACTATGCTAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAIIACS*GTMLVA
Trigger: AGCCACTAGCATAGTTCCCCAGGAGCAGGCTATGAT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGGTCAAGGCTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLWSRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCCCACTGCAGCCTTGACCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGTCTGGGATGACTCCTTaGCCTCTCCTCCTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQSGMTP*PLLLCH
Trigger: GTGGCACAGGAGGAGAGGCCAAGGAGTCATCCCAGA...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp AGGGAGTGTTTCCAAACCATTCTCTTGCAGGCAGTGTaGAAAGTAAGGAAGATTGGAACCTGTCTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RECFQTILLQAV*KVRKIGTCLSK
Trigger: CTTACTGAGACAGGTTCCAATCTTCCTTACTTTCAACACTGCCTGCAAGAGAATGGTTTGGAAACACTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GAAAGGAAATTAAGGTCCCATGAGGTAATAAAGGGATaGTGGTTAGGAGCTTACCAACCTGGGGGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: ERKLRSHEVIKG*WLGAYQPGGLR
Trigger: TCTAAGACCCCCAGGTTGGTAAGCTCCTAACCACAATCCCTTTATTACCTCATGGGACCTTAATTTCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp TTCAGTCTTTGTGGCTGTGATTGGATAGGAGGGCCTTaGAATACTTGTATCAGTAAAGAGATACTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSLCGCDWIGGP*NTCISKEILGR
Trigger: CCTGCCCAGTATCTCTTTACTGATACAAGTATTCAAAGGCCCTCCTATCCAATCACAGCCACAAAGACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp AAGGAGCTCTGGTTACTTGGCCTTAAGATGTCACTGTaGTGCTGCACATATGGTAGTGAAGTCAGAGATCAT +
Preference number: 4 (lower is better)
Translates to: KELWLLGLKMSL*CCTYGSEVRDH
Trigger: ATGATCTCTGACTTCACTACCATATGTGCAGCACAACAGTGACATCTTAAGGCCAAGTAACCAGAGCTCCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPAPDGR*FSVWWS
Trigger: TGACCACCAAACGGAAAATCATCGGCCGTCTGGTGC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLAPDGR*FSVWWS
Trigger: TGACCACCAAACGGAAAATCATCGGCCGTCTGGTGC...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAAAGCTGTCACTGTCTaGCTGGAAATCTTCATCACC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYKAVTV*LEIFIT
Trigger: GGTGATGAAGATTTCCAGTCAGACAGTGACAGCTTT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATATCTTGGATCTGCTaGTCACACCTGGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTISWIC*SHLAHG
Trigger: ACCATGGGCCAGGTGTGATCAGCAGATCCAAGATAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTTCATTAGCTGGATaGACAAAAGAATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLISLAG*TKESST
Trigger: AGTGGAGGATTCTTTTGTTCATCCAGCTAATGAAAT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCAGCCTCCCGCTGGCTaGGTAATGGCTTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLQPPAG*VMALNQ
Trigger: TTGATTCAAAGCCATTACTCAGCCAGCGGGAGGCTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCAATCCTGTCTTGCCTaGTCAAAGGCCTGCGTCCAT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLQSCLA*SKACVH
Trigger: ATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTGGGATTGGAATCATaGTACTCCCATGGTACGCCT +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYLGLES*YSHGTP
Trigger: AGGCGTACCATGGGAGTATCATGATTCCAATCCCAA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATACTACTTCCGTAGGTaGGCATCTCATCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAYYFRR*ASHHPA
Trigger: TGCTGGATGATGAGATGCTCACCTACGGAAGTAGTA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACTTCCACTGATCCTTaGGGATTGAAGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYTSTDP*GLKLWS
Trigger: TGACCAAAGCTTCAATCCTCAAGGATCAGTGGAAGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATACTCGGGATTGTGTTaGAAAGGGGGTGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTYSGLC*KGGGIL
Trigger: GAGGATACCACCCCCTTTTCAACACAATCCCGAGTA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATAGGCAATGGTGACTaGAATTGCTGGATGGTCACT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYIGNGD*NCWMVT
Trigger: AGTGACCATCCAGCAATTTCAGTCACCATTGCCTAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCTGAATAGGCAATGGTaGCTGAAATTGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYLNRQW*LKLLDG
Trigger: ACCATCCAGCAATTTCAGTCACCATTGCCTATTCAG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCTTGTCAGAAGGTTTaGATGGATTTCCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYPCQKV*MDFLVH
Trigger: GTGGACAAGGAAATCCATTCAAACCTTCTGACAAGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGCTGGCCCATCAGGCTaGACCCTAGTAACAAAGATA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTAGPSG*TLVTKI
Trigger: TATCTTTGTTACTAGGGTTCAGCCTGATGGGCCAGC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGCCTGCATGCATTGCTaGAATACCTCCATAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLACMHC*NTSIGQ
Trigger: CTGCCCTATGGAGGTATTTCAGCAATGCATGCAGGC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GAATGGGAAAGATACACATTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCAGAAACCAAGAAGAGCTaGACGATTACTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EWERYTLPCTVFDVELLSETKKS*TITPLS
Trigger: GGAGAGAGGAGTAATCGTTCAGCTCTTCTTGGTTTC...TGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608815.5
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTGTAAATTCTTCTTTTaGCATCTGGAAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQECKFFF*HLEEQE
Trigger: CTCCTGCTCTTCCAGATGTCAAAAGAAGAATTTACA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000651989.2
CDS-3UTR TCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTGAGGATCACCAGAAGGGAAGTGCCACACATTaGTTTGGGGGTATAAACTTT +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTEDHQKGSATH*FGGINF
Trigger: AAAGTTTATACCCCCAAATCAATGTGTGGCACTTCC...CTTCTGGTGATCCTCAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCAACCTTCCACCTTTTaGGGTGCTGCCATAACAAAA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYQPSTF*GAAITK
Trigger: TTTTGTTATGGCAGCACCTCAAAAGGTGGAAGGTTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTCACCTGTGGAAATTTaGCCCAGACCTTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYSPVEI*PRPCLW
Trigger: CCAAAGACAAGGTCTGGGTCAAATTTCCACAGGTGA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTTTCAGGGGATCACTTaGGCAGCGTGTAGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYFQGIT*AACSEN
Trigger: ATTTTCACTACACGCTGCTCAAGTGATCCCCTGAAA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGCCTCGTCTCTCTCATaGCATCTTTTATTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKASSLS*HLLFFP
Trigger: AGGGAAGAATAAAAGATGTCATGAGAGAGACGAGGC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGATCATAATGAGACTGTaGGAACCTATCAAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEIIMRL*EPIKCK
Trigger: CTTGCACTTGATAGGTTCTCACAGTCTCATTATGAT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATAGTCCCTTCACTTTaGGTAGTTTATGATGACCTA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLIVPSL*VVYDDL
Trigger: TAGGTCATCATAAACTACTCAAAGTGAAGGGACTAT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTGCCTTATTAGTCACTaGTTTAAGGCTCAATTCAGG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQECLISH*FKAQFR
Trigger: CCTGAATTGAGCCTTAAATCAGTGACTAATAAGGCA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATCCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHPLPKC*TNLFTR
Trigger: CCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGG...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPLPKC*TNLFTR
Trigger: CCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAGGCCTCTTCCGAAGTaGTGCACGAACCTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTRPLPK*CTNLFT
Trigger: TGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATGCGTTGTTGTCTCTaGTCTTCCCACAGTGTAGGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTMRCCL*SSHSVG
Trigger: CCCTACACTGTGGGAAGAGCAGAGACAACAACGCAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAAGTGGTGGATTGTGCTaGAACTGGCAATGGAGTACA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASGGLC*NWQWST
Trigger: TGTACTCCATTGCCAGTTGCAGCACAATCCACCACT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAAAGAGTGGTGGATTGTaGTGCAACTGGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAKSGGL*CNWQWS
Trigger: ACTCCATTGCCAGTTGCAGCACAATCCACCACTCTT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGTTCTGGTCCAATTCTaGCAAGGATTGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTVLVQF*QGLEGG
Trigger: GCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAAC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGTTCTGGTCCAATTCTaGCAAGGATTGGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIVLVQF*QGLEGG
Trigger: GCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAAC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACCCTATATGGGGGTCTaGCGTACCTATCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPPYMGV*RTYQLG
Trigger: CCCCAACTGATAGGTACGGCAGACCCCCATATAGGG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAATGAAAGATAATGCATaGAACCAACTCCGGGAAATT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKMKDNA*NQLREI
Trigger: AATTTCCCGGAGTTGGTTGCATGCATTATCTTTCAT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAAAGAGTTGTCCCAGTaGCTGAACCAGATGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKKELSQ*LNQMPF
Trigger: AAAAGGCATCTGGTTCAGGCACTGGGACAACTCTTT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGGGAAAGATACACATTaGCTTGTACTGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEGKDTH*LVLSLM
Trigger: CATCAAAGACAGTACAAGGCAATGTGTATCTTTCCC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
CDS-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAGGAAAGGCGAATCCTaGACCCAACTCCGTAACAAC +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIRKGES*TQLRNN
Trigger: GTTGTTACGGAGTTGGGTGCAGGATTCGCCTTTCCT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAACTGCAACCTCCGCCTaGTGGGTTGAAGCAATTCTC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITTATSA*WVEAIL
Trigger: GAGAATTGCTTCAACCCAGCAGGCGGAGGTTGCAGT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGAGACTGGAGGATATaGCTGAATCTGATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKRDWRI*LNLISF
Trigger: AAAAGAAATCAGATTCAGGCATATCCTCCAGTCTCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCCCAAGCCAGAGAATTaGCAAGGCTGGGATTTAAAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKPKPEN*QGWDLK
Trigger: TTTTAAATCCCAGCCTTGGCAATTCTCTGGCTTGGG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCTTCCCTCTACCTTTaGTCCGGGTTGGAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSSLYL*SGLEEK
Trigger: TTTTTCTTCCAACCCGGAGCAAAGGTAGAGGGAAGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGAGATGATCATAGCCTaGTCCTGGGGAACTATGCTA +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYEMIIA*SWGTML
Trigger: TAGCATAGTTCCCCAGGAGCAGGCTATGATCATCTC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGGGCTACACCTCAGTTaGGAACTGAGGAAAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAGLHLS*ELRKVV
Trigger: AACAACTTTCCTCAGTTCGCAACTGAGGTGTAGCCC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTTTCCCAGGGGGCTTaGCAGGAGAGATCCTTAACT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLSQGA*QERSLT
Trigger: AGTTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGACAGTCTGGCAGGTTaGAGAGTAATCCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPDSLAG*RVIPRW
Trigger: CCAGCGTGGGATTACTCTCCAACCTGCCAGACTGTC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTCTGCTGATCACACCTaGCCCATGGTGTGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSADHT*PMVCSN
Trigger: ATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGGATTGTGCTGCAACTaGCAATGGAGTACACATGCT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAGLCCN*QWSTHA
Trigger: AGCATGTGTACTCCATTGCCAGTTGCAGCACAATCC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGAGAGGGAAGAGTGGTaGATTGTGCTGCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLEREEW*IVLQLA
Trigger: TGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGGAGAGGGAAGAGTGGTaGATTGTGCTGCAACTGGCA +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEEREEW*IVLQLA
Trigger: TGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTC...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAGGCTGTGGGAAAGATaGTGCAATCCTGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTRLWER*CNPVTP
Trigger: TGGGGTAACAGGATTGCACCATCTTTCCCACAGCCT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGAACAGCCTCCCGCTaGCTGAGTAATGGCTTTGAA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGTASR*LSNGFE
Trigger: TTCAAAGCCATTACTCAGCCAGCGGGAGGCTGTTCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATGGCATTCTCGGCTGTaGTTTCCTCAGCAACAAACC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTWHSRL*FPQQQT
Trigger: GGTTTGTTGCTGAGGAAACCACAGCCGAGAATGCCA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGAGAGGATTACTGTTaGCATTCTCGGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYREDYC*HSRLWF
Trigger: AAACCACAGCCGAGAATGCCAACAGTAATCCTCTCT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGGTTGTCTCTAATTTaGAAGGAAAAGCGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYGLSLI*KEKRSC
Trigger: ACAGGACCGCTTTTCCTTCCAAATTAGAGACAACCC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGGCGATGTTTTTGCTaGCCTGTTGCACGTACTCGG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLWRCFC*PVARTR
Trigger: CCGAGTACGTGCAACAGGCCAGCAAAAACATCGCCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGACAATGGCCTCCTTTaGGTAAGGTTTTTAACCGGA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKDNGLL*VRFLTG
Trigger: TCCGGTTAAAAACCTTACCCAAAGGAGGCCATTGTC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTATCCCGCCTCCCAAGTaGATAAGGATTCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLIPPPK*IRIPLA
Trigger: GGCCAATGGAATCCTTATCCACTTGGGAGGCGGGAT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAATTGACCTGCATACCTaGGCATTATTTAACCTCATT +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKIDLHT*ALFNLI
Trigger: AATGAGGTTAAATAATGCCCAGGTATGCAGGTCAAT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATTATATATAGCTGGTTaGGGGAGCCCTTGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKALYIAG*GSPWAV
Trigger: AACTGCCCAAGGGCTCCCCCAACCAGCTATATATAA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGACTGCTGTGGCTTGTTaGTTCTTCCATAAAAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQETAVAC*FFHKSF
Trigger: AAAGCTTTTATGGAAGAACCAACAAGCCACAGCAGT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAGTTGTCCCAGTGCCTGAACCAGATGCCTTTTCCACATTCAAGCCAAATAAGGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: RVVPVPEPDAFSTFKPNKVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...CTTATTTGGCTTGAATGTGGAAAAGGCATCTGGTTCAGGCACTGGGACAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CCA 90 bp TCCACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTGAGGATCACCAGGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: STFKPNKSPLSGKTEDHQVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...CTGGTGATCCTCAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CCA 90 bp ACGATTTTTGGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTGCCTGAACCAGATGGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: TIFGSFFGKELSQCLNQMVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...CATCTGGTTCAGGCACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAATCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGTATTCTTTGGGTATaGTGTTGGTGGGTGATGGGA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKCILWV*CWWVMG
Trigger: TCCCATCACCCACCAACACCATACCCAAAGAATACA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCCTTGCATTTCGGAGTaGGTCATTCTAACATTGGAC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKPCISE*VILTLD
Trigger: GTCCAATGTTAGAATGACCCACTCCGAAATGCAAGG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCATGTCATGCTCAACTGTaGCCAACAGCCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPCHAQL*PTACRQ
Trigger: CTGTCTACAGGCTGTTGGCCACAGTTGAGCATGACA...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGTAATAAAGGGATTGTaGTTAGGAGCTTACCAACCT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEVIKGL*LGAYQP
Trigger: AGGTTGGTAAGCTCCTAACCACAATCCCTTTATTAC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGATTGCAAACTACCTTaGGAATCCAATGATCACTTT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLDCKLP*ESNDHF
Trigger: AAAGTGATCATTGGATTCCCAAGGTAGTTTGCAATC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCTTTGTGGCTGTGATTaGATAGGAGGGCCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKLCGCD*IGGPLN
Trigger: ATTCAAAGGCCCTCCTATCCAATCACAGCCACAAAG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGAATCTAAAACTGAGATaGTTTCTTCTTCACCTCGGA +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQENLKLR*FLLHLG
Trigger: TCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGTAGAGCTTGACAGTTaGACAATTGCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYVELDS*TIAWVV
Trigger: AACTACCCAAGCAATTGTTCAACTGTCAAGCTCTAC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTATCCAGCATTGGGACTaGCTGGCTTCGAGACATACT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLIQHWD*LASRHT
Trigger: AGTATGTCTCGAAGCCAGTCAGTCCCAATGCTGGAT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATACTACTTCCGTAGGTaGGCATCTCATCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTYYFRR*ASHHPA
Trigger: TGCTGGATGATGAGATGCTCACCTACGGAAGTAGTA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACATAGTAGGCCTAGCTaGAACTGGCCTGGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPHSRPS*NWPGLG
Trigger: TCCCAAACCAGGCCAGTTTCAGCTAGGCCTACTATG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTGTGTCCATTTGCCTaGAGGATCTTATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLCPFA*RILSPG
Trigger: GCCTGGTGATAAGATCCTTCAGGCAAATGGACACAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACTGTGTCCATTTGCCTaGAGGATCTTATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITLCPFA*RILSPG
Trigger: GCCTGGTGATAAGATCCTTCAGGCAAATGGACACAG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATACAGTAAGCTCACGTTaGATAACTAGGTCTACTGTG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYTVSSR*ITRSTV
Trigger: CACAGTAGACCTAGTTATTCAACGTGAGCTTACTGT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGGTAGACCACAGCTCTaGGAAATTATATTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEGRPQL*EIIFEV
Trigger: AACTTCAAATATAATTTCTCAGAGCTGTGGTCTACC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAGCAGAATTAGTCCCTaGTTTCCCATCATGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSRISP*FPIMLH
Trigger: ATGAAGCATGATGGGAAATCAGGGACTAATTCTGCT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR TCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTTTATGTTGTCTGCCTaGGAGTTTCATCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEFMLSA*EFHLAF
Trigger: AAAAGCAAGATGAAACTCTCAGGCAGACAACATAAA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCAGAGGTTTGAATACTaGGATACTGCTGACACAGAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKQRFEY*DTADTE
Trigger: TTCTGTGTCAGCAGTATCTCAGTATTCAAACCTCTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGCTTTGGCCTATTTTaGAATGCAGTTGCTCTAAGG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSFGLF*NAVALR
Trigger: CCTTAGAGCAACTGCATTTCAAAATAGGCCAAAGCT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACCATCTCAAAGGTCGTaGTCCAAGGTAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITPSQRS*SKVRSR
Trigger: TCTGGACCTTACCTTGGATCACGACCTTTGAGATGG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATCAGCAACTGCAGCAATaGAGACAGGTCAGTTTTACA +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYQQLQQ*RQVSFT
Trigger: TGTAAAACTGACCTGTCTTCATTGCTGCAGTTGCTG...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGCAGGAAAATCGTTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGRKIV*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAACGATTTTCCTGCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGACCTTGGGAATCCAATaGTCACTTTGTGAGAGACAT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKTLGIQ*SLCERH
Trigger: ATGTCTCTCACAAAGTGATCATTGGATTCCCAAGGT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATGGAGAACTCTTAATTaGAGGCTCTGGCTGGATAGG +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIWRTLN*RLWLDR
Trigger: CCTATCCAGCCAGAGCCTTCAATTAAGAGTTCTCCA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPLPKC*TNLFTR
Trigger: CCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAACTGGGCCAGTTTGTaGATTGACTTTGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYNWASL*IDFGRV
Trigger: AACTCTACCAAAGTCAATGCACAAACTGGCCCAGTT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGAATCAGGCAATTGTTaGAACATATTGGATGACAAT +
Preference number: 4 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLESGNC*NILDDN
Trigger: ATTGTCATCCAATATGTTGCAACAATTGCCTGATTC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACACATGCTCCTTTCCTaGTGGAGGCCACTTATACAA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTHMLLS*WRPLIQ
Trigger: TTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTGTGGGAAAGATGGTaGAATCCTGTTACCCCACAA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLWERW*NPVTPQ
Trigger: TTGTGGGGTAACAGGATTGCACCATCTTTCCCACAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGTCTGTGTGTAGACTaGTCGAGTTCCAGGGGAACA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLCLCVD*SSSRGT
Trigger: TGTTCCCCTGGAACTCGAGCAGTCTACACACAGACA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACCTTGGCGATGTTTTTaGTGGCCTGTTGCACGTACT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLPWRCF*WPVART
Trigger: AGTACGTGCAACAGGCCAGCAAAAACATCGCCAAGG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTGTTGTCTCCAGTCTaGAGGCATTTTACCACAGCT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLLSPV*RHFTTA
Trigger: AGCTGTGGTAAAATGCCTGCAGACTGGAGACAACAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCTAAAATGTTGCTTTaGTGGGACGGGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSKMLL*WDGVLS
Trigger: AGACAGGACCCCGTCCCAGCAAAGCAACATTTTAGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAAGCAATACCTTTCCTaGCACCCATCATCCACTGCT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTKQYLS*HPSSTA
Trigger: AGCAGTGGATGATGGGTGGCAGGAAAGGTATTGCTT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLGSPVI*PNWYLK
Trigger: CTTCAAGTACCAGTTTGGGCATATTACTGGAGATCC...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
CDS-3UTR GCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGAGCTACATAAAGCATTaGTTTTTCCTAAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQESYIKH*FFLKAG
Trigger: ACCTGCCTTTAGGAAAAAGCAATGCTTTATGTAGCT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTGAGGATCACCAGAAGGTGAGTAGGCAAGTTTaGAAATATAGCACCCATGAA +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTEDHQKVSRQV*KYSTHE
Trigger: TTCATGGGTGCTATATTTGCAAACTTGCCTACTCAC...CTTCTGGTGATCCTCAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACCACCACGCCTGGCCTaGCTGTTTTCATTATTACCT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITPPRLA*LFSLLP
Trigger: AGGTAATAATGAAAACAGGCAGGCCAGGCGTGGTGG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCACCTTTTGAGGTGCTaGCATAACAAAATTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKHLLRC*HNKIRH
Trigger: GTGCCTAATTTTGTTATGGCAGCACCTCAAAAGGTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTCAAGAGATTCTGGTTaGTATTTATCTTGTCTAGCA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLSRDSG*YLSCLA
Trigger: TGCTAGACAAGATAAATAGCAACCAGAATCTCTTGA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAGAGGCTGGGGAGATTaGAAACTACCTTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKRGWGD*KLPWES
Trigger: GGATTCCCAAGGTAGTTTGCAATCTCCCCAGCCTCT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATGGCCACAAAGAAATaGCTGAACTGTTTGCTAGCA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYMATKK*LNCLLA
Trigger: TGCTAGCAAACAGTTCAGGCATTTCTTTGTGGCCAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTTTCCCAGGGGGCTTaGCAGGAGAGATCCTTAACT +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLLSQGA*QERSLT
Trigger: AGTTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTATGCTCCTTTCCTGCTaGAGGCCACTTATACAACCC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLMLLSC*RPLIQP
Trigger: GGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCAT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAATGCTCCTTTCCTGCTaGAGGCCACTTATACAACCC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITMLLSC*RPLIQP
Trigger: GGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCAT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTCAACACGCACTCCATaGCTTGGCTTACCCACCAAA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSTRTP*LGLPTK
Trigger: TTTGGTGGGTAAGCCAAGCCATGGAGTGCGTGTTGA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACAGAACAAGTTTGGGTaGGTACAGAGGGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPQNKFG*VQRGLS
Trigger: GCTGAGACCCCTCTGTACCCACCCAAACTTGTTCTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTAGCAGAACAAGTTTaGGTGGGTACAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLAEQV*VGTEGS
Trigger: AGACCCCTCTGTACCCACCCAAACTTGTTCTGCTAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACTAGCAGAACAAGTTTaGGTGGGTACAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITLAEQV*VGTEGS
Trigger: AGACCCCTCTGTACCCACCCAAACTTGTTCTGCTAG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAGGCTGTGGGAAAGATaGTGCAATCCTGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWERLWER*CNPVTP
Trigger: TGGGGTAACAGGATTGCACCATCTTTCCCACAGCCT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATGGCATTCTCGGCTGTaGTTTCCTCAGCAACAAACC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITWHSRL*FPQQQT
Trigger: GGTTTGTTGCTGAGGAAACCACAGCCGAGAATGCCA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTTCCTTTCAGGCAATaGGCTGGTAGTGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLFPFRQ*AGSGGC
Trigger: ACAACCCCCACTACCAGCCCATTGCCTGAAAGGAAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGCTTCGAGACATACTaGACATACCATGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGFETY*TYHALV
Trigger: GACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGGCTTCGAGACATACTaGACATACCATGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITGFETY*TYHALV
Trigger: GACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGCTTCTCGCAGACAATaGCCTCCTTTGGGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIASRRQ*PPLGKV
Trigger: AACCTTACCCAAAGGAGGCCATTGTCTGCGAGAAGC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATCAACGTCTGGATGTaGCTGCCTGCCTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTINVWM*LPAFLV
Trigger: TACTAAGAAGGCAGGCAGCCACATCCAGACGTTGAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATGCAAGGGGCACACTCTaGATCTTCAGATGTTTGGTA +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHARGTL*IFRCLV
Trigger: TACCAAACATCTGAAGATCCAGAGTGTGCCCCTTGC...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTCTTTAGTAGAGGGTTaGGGAAGGGTAAGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYSLVEG*GRVRGM
Trigger: CATTCCTCTTACCCTTCCCCAACCCTCTACTAAAGA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAATCTTGCTTTTCCTATaGACCGTCCAAAAATATTAC +
Preference number: 4 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKILLFL*TVQKYY
Trigger: GTAATATTTTTGGACGGTCCATAGGAAAAGCAAGAT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCATTTCTTATATATAGCTaGTTGGGGGAGCCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPFLIYS*LGEPLG
Trigger: GCCCAAGGGCTCCCCCAACCAGCTATATATAAGAAA...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACACATTGCCTTCTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QTPNSYDLRQNGKDTHCLLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...AAGGCAATGTGTATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAACATAACGTCCACCTaGGCAATGGGTAGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKNITST*AMGRAR
Trigger: TCTAGCCCTACCCATTGCCCAGGTGGACGTTATGTT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAACAGACAATAAATCCTaGGCGGAGAAGAGACAAGCA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKATDNKS*AEKRQA
Trigger: TGCTTGTCTCTTCTCCGCCCAGGATTTATTGTCTGT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGGGCAGTTCTATATCTaGCTCTTCTCCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLGQFYI*LFSHFS
Trigger: GGAGAAGTGGGAGAAGAGCCAGATATAGAACTGCCC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGCCTTTGGAAAAACATaGGGAGTTGGAGGGACGGAT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLAFGKT*GVGGTD
Trigger: ATCCGTCCCTCCAACTCCCCATGTTTTTCCAAAGGC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGGATGTAAAGATACTTaGCTATTTGTTAGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEGCKDT*LFVRLL
Trigger: AAGCAGCCTAACAAATAGCCAAGTATCTTTACATCC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGAGAATTGCCAAGGCTaGGATTTAAAATGTAGATAT +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLENCQG*DLKCRY
Trigger: ATATCTACATTTTAAATCCCAGCCTTGGCAATTCTC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTGATCCCTTTAAGTaGAACAGTAAGCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLIDPFK*NSKPLL
Trigger: TAACAAAGGCTTACTGTTCCACTTAAAGGGATCAAT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGACATACTTATTCCCTaGGCTACACCTCAGTTGCGA +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPDILIP*ATPQLR
Trigger: TCGCAACTGAGGTGTAGCCCAGGGAATAAGTATGTC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATTTGTAGACAGAGTTaGGCCAAAGTCTGCATGAAG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYICRQS*AKVCMK
Trigger: CTTCATGCAGACTTTGGCCCAACTCTGTCTACAAAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp CATAAATGCTGCGTGAATTTCACAACCTTCCACCTTTaGAGGTGCTGCCATAACAAAATTAGGCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: HKCCVNFTTFHL*RCCHNKIRHKR
Trigger: CCTTTTGTGCCTAATTTTGTTATGGCAGCACCTCAAAAGGTGGAAGGTTGTGAAATTCACGCAGCATTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp TTCCAGAGATTCAAGAGATTCTGGTTGCTATTTATCTaGTCTAGCAAGGCATTCACACTTGCCACGTTTAGC +
Preference number: 4 (lower is better)
Translates to: FQRFKRFWLLFI*SSKAFTLATFS
Trigger: GCTAAACGTGGCAAGTGTGAATGCCTTGCTAGACAAGATAAATAGCAACCAGAATCTCTTGAATCTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp TTATACTTGCCTGAGGATCACCAGAAGGATTTTGTCTaGTGCAGAAGGCTAAAAGCAGAGTCATACTTTCTC +
Preference number: 4 (lower is better)
Translates to: LYLPEDHQKDFV*CRRLKAESYFL
Trigger: GAGAAAGTATGACTCTGCTTTTAGCCTTCTGCACAAGACAAAATCCTTCTGGTGATCCTCAGGCAAGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAAAGCTGTCACTGTCTaGCTGGAAATCTTCATCACC +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIKAVTV*LEIFIT
Trigger: GGTGATGAAGATTTCCAGTCAGACAGTGACAGCTTT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCTGTTATTCAGACAGTaGGTTTTGTCAACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYLLFRQ*VLSTSD
Trigger: GTCTGAAGTTGACAAAACTCACTGTCTGAATAACAG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACAGTCCAGTTGTCAGTaGAAGTATCACTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIQSSCQ*KYHSWA
Trigger: TGCCCATGAGTGATACTTTCACTGACAACTGGACTG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTGGGATTGGAATCATaGTACTCCCATGGTACGCCT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLGLES*YSHGTP
Trigger: AGGCGTACCATGGGAGTATCATGATTCCAATCCCAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAACTTCCACTGATCCTTaGGGATTGAAGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTTSTDP*GLKLWS
Trigger: TGACCAAAGCTTCAATCCTCAAGGATCAGTGGAAGT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGCTTTCACTTCCACTaGTCCTTGAGGATTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGFHFH*SLRIEA
Trigger: AGCTTCAATCCTCAAGGATCAGTGGAAGTGAAAGCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATACTCGGGATTGTGTTaGAAAGGGGGTGGTATCCTC +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLYSGLC*KGGGIL
Trigger: GAGGATACCACCCCCTTTTCAACACAATCCCGAGTA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAATAGGCAATGGTGACTaGAATTGCTGGATGGTCACT +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPIGNGD*NCWMVT
Trigger: AGTGACCATCCAGCAATTTCAGTCACCATTGCCTAT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGCTGGCCCATCAGGCTaGACCCTAGTAACAAAGATA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPAGPSG*TLVTKI
Trigger: TATCTTTGTTACTAGGGTTCAGCCTGATGGGCCAGC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACTGTGTCCATTTGCCTaGAGGATCTTATCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLCPFA*RILSPG
Trigger: GCCTGGTGATAAGATCCTTCAGGCAAATGGACACAG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp GAATGGGAAAGATACACATTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCAATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: EWERYTLPCTVFDVELLSIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...TGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
CDS-3UTR TCA 90 bp ATGACACTAAGTTTCACATTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCAGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 4 (lower is better)
Translates to: MTLSFTLPCTVFDVELLSALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...TGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
CDS-3UTR TCA 90 bp GAACGATTACTCCTCTCTCCTGAGGCTCTTCTGTCTAGAAGTCCTTTGTTAAGTTTGTTAAGTATTGTCTaGTCCTCTCTCTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: ERLLLSPEALLSRSPLLSLLSIV*SSLSKS
Trigger: GCTTTTTGAGAGAGAGGATCAGACAATACTTAACAA...ACTTAACAAAGGACTTCTAGACAGAAGAGCCTCAGGAGAGAGGAGTAATCGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608815.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCTACTGGAGCCATCATaGATTCCAGTTCTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYLLEPS*IPVLFV
Trigger: AACAAAAAGAACTGGAATTCATGATGGCTCCAGTAG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGCTGTAACCATCTGTTaGTACTCAAGGCTCTCCGAA +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITAVTIC*YSRLSE
Trigger: TTCGGAGAGCCTTGAGTATCAACAGATGGTTACAGC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATACATAAATGCTGCGTaGATTTCACAACCTTCCACC +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAYINAA*ISQPST
Trigger: GGTGGAAGGTTGTGAAATTCACGCAGCATTTATGTA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAAGTGCTGGACCAAGTTaGGGAACACCTTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPSAGPS*GTPFFI
Trigger: AATGAAGAAAGGTGTTCCTCAACTTGGTCCAGCACT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGAAACCAAGAAGAGCTaGACGATTACTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFETKKS*TITPLA
Trigger: GGCCAGAGGAGTAATCGTTCAGCTCTTCTTGGTTTC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATTGGGGAGGAGTGCGTaGGATGTTTCAAAAGGATCT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITLGRSA*DVSKGS
Trigger: AGATCCTTTTGAAACATCTCACGCACTCCTCCCCAA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGCTAGACTGTGTTTCTTaGGGGGTAGGACCATGGCTT +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQLDCVS*GVGPWL
Trigger: AAGCCATGGTCCTACCCCTCAAGAAACACAGTCTAG...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGCACCTGCTGAAGACTaGAGTGGGAGTAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTAPAED*SGSNLK
Trigger: TTTTAGATTACTCCCACTGCAGTCTTCAGCAGGTGC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAACTGGGCCAGTTTGTaGATTGACTTTGGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYNWASL*IDFGRV
Trigger: AACTCTACCAAAGTCAATGCACAAACTGGCCCAGTT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTACTTATACAACCCCATaGCAGCTGTGGGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLTYTTP*QLWVIL
Trigger: CAGAATGACCCACAGCTGGCATGGGGTTGTATAAGT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATTTTTCTTTCACAGTTTaGTCCGTGTTAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYFSFTV*SVLAVG
Trigger: TCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAA...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGTAGTCTGAGTAAGTaGCTGAGGAAACACTGTTAT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYSSLSK*LRKHCY
Trigger: ATAACAGTGTTTCCTCAGGCACTTACTCAGACTACT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAAAGGCCTGCGTCCATaGGAAGATGTGCTTCTAGAT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLKGLRP*EDVLLD
Trigger: ATCTAGAAGCACATCTTCGCATGGACGCAGGCCTTT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATACTGGACATACCATaGTCTGGTCCCAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTILDIP*SGPSIL
Trigger: TAAGATGCTGGGACCAGAGCATGGTATGTCCAGTAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAGGAAAAGCCCGTAAGTaGAATGTGTCCTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLGKARK*NVSCSH
Trigger: GTGTGAGCAGGACACATTGCACTTACGGGCTTTTCC...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAG +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYGSPVI*PNWYLK
Trigger: CTTCAAGTACCAGTTTGGGCATATTACTGGAGATCC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR GCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCGGGAAAGATACACATTaGCTTGTACTGTCTTTGATG +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLGKDTH*LVLSLM
Trigger: CATCAAAGACAGTACAAGGCAATGTGTATCTTTCCC...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGGCCTATTTTGAAATaGAGTTGCTCTAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKWPILK*SCSKEM
Trigger: CATCTCCTTAGAGCAACTGCATTTCAAAATAGGCCA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGAAGCAGACATCCACTaGCTTTGGAAAAACATGGGG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLEADIH*LWKNMG
Trigger: CCCCATGTTTTTCCAAAGGCAGTGGATGTCTGCTTC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGACTACTCCAGGTTCCTaGGTTACCCAAGAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKTTPGS*VTQESS
Trigger: GGAACTTTCTTGGGTAACGCAGGAACCTGGAGTAGT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGACTCGATTTCCTTTTaGAATAGGATGGTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTDSISF*NRMVEG
Trigger: GCCCTCAACCATCCTATTGCAAAAGGAAATCGAGTC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGCATACAGACTCAGTaGTGGACCAAGTTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGIQTQ*WTKLRN
Trigger: GTTCCTCAACTTGGTCCAGCACTGAGTCTGTATGCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAACAAAAATCGGACTGTaGTCCCCCAAGCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLTKIGL*SPKPEN
Trigger: ATTCTCTGGCTTGGGGGAGCACAGTCCGATTTTTGT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGTGCAAGATACCCGTTaGTTAGTCAAACGATTCTAC +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAVQDTR*LVKRFY
Trigger: GTAGAATCGTTTGACTAAGCAACGGGTATCTTGCAC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAAAGTTGCTTCTCGATaGTGCTCCCAGTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFKVASR*CSQWSL
Trigger: CAAGGACCACTGGGAGCAGCATCGAGAAGCAACTTT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAAAATGACTGAAAGTTaGTTCTCGATGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYKMTES*FSMLLP
Trigger: TGGGAGCAGCATCGAGAAGCAACTTTCAGTCATTTT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGCTCCCTTGCTCATTTaGAGCCACCAGTTAACAATG +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITAPLLI*SHQLTM
Trigger: CATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATTTACAAGGACTTCTCTaGTATTGCGGGGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHLQGLL*YCGGFL
Trigger: AAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAA...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCATTACAAGGACTTCTCTaGTATTGCGGGGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPLQGLL*YCGGFL
Trigger: AAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAA...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGCTGCAACTGGCAATaGAGTACACATGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLCCNWQ*STHAPF
Trigger: GAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTACGCACTCCATGGCTTaGCTTACCCACCAAATTTTG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLTHSMA*LTHQIL
Trigger: CAAAATTTGGTGGGTAAGCCAAGCCATGGAGTGCGT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAACGCACTCCATGGCTTaGCTTACCCACCAAATTTTG +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITTHSMA*LTHQIL
Trigger: CAAAATTTGGTGGGTAAGCCAAGCCATGGAGTGCGT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGCTCCCATGGTACGCCTaGAGAAAAAGGACTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWELPWYA*RKRTRY
Trigger: ATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAG...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAGCATTGGGACTGACTaGCTTCGAGACATACTGGAC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQSIGTD*LRDILD
Trigger: GTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGACAATGGCCTCCTTTaGGTAAGGTTTTTAACCGGA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTDNGLL*VRFLTG
Trigger: TCCGGTTAAAAACCTTACCCAAAGGAGGCCATTGTC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGATCAACGTCTGGATGTaGCTGCCTGCCTTCTTAGTA +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEINVWM*LPAFLV
Trigger: TACTAAGAAGGCAGGCAGCCACATCCAGACGTTGAT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAACCAAAGCCGAAAAATaGCTCTGCTATACACTGCAC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTTKAEK*LCYTLH
Trigger: GTGCAGTGTATAGCAGAGCCATTTTTCGGCTTTGGT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGAAAGACTTTCAACCTaGATCTCCAGTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAERLST*ISSNMP
Trigger: GGGCATATTACTGGAGATCCAGGTTGAAAGTCTTTC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTCTTCTTTTGACATCTaGAAGAGCAGGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSSFDI*KSRREG
Trigger: GCCTTCCCTCCTGCTCTTCCAGATGTCAAAAGAAGA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATATCAAATATACCCTTTaGAAAGGCATGCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYIKYTL*KGMPML
Trigger: AAGCATGGGCATGCCTTTCCAAAGGGTATATTTGAT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGACATCCACTGCCTTTaGAAAAACATGGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITDIHCL*KNMGSW
Trigger: CCAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATTGGGAGGGGTAACATaGTTTTGTCAAGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEILGGVT*FCQGNP
Trigger: AGGGTTACCTTGACAAAACCATGTTACCCCTCCCAA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCCCACATACTTGGAATaGGCATACCTGAAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKPTYLE*AYLKEV
Trigger: CACTTCCTTCAGGTATGCCCATTCCAAGTATGTGGG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTCAGTAAAGAGATACTaGGCAGGGCCCTTGAATGCT +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKSVKRY*AGPLNA
Trigger: AGCATTCAAGGGCCCTGCCCAGTATCTCTTTACTGA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAATCTAAAACTGAGATaGTTTCTTCTTCACCTCGGA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYNLKLR*FLLHLG
Trigger: TCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATGTAGAGCTTGACAGTTaGACAATTGCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHVELDS*TIAWVV
Trigger: AACTACCCAAGCAATTGTTCAACTGTCAAGCTCTAC...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATAGTGGTTGGCAGATTTaGAAGGTCGTTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHSGWQI*KVVIRN
Trigger: ATTCCTGATAACGACCTTTCAAATCTGCCAACCACT...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGTAGAGTTTTCAAGTaGTTTTCTCTTAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYGRVFK*FSLNSK
Trigger: CTTGGAGTTAAGAGAAAATCACTTGAAAACTCTACC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATGGAGCGTAGAGACATaGCTGTTACATTCTTACAAC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTWSVET*LLHSYN
Trigger: GTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATAAGGGCTTTGGACTaGTTGTCAGAAAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTIRALD*LSESHK
Trigger: TTTGTGGCTTTCTGACAATCAGTCCAAAGCCCTTAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACAGTCCAGTTGTCAGTaGAAGTATCACTCATGGGCA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPQSSCQ*KYHSWA
Trigger: TGCCCATGAGTGATACTTTCACTGACAACTGGACTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTGAATAGGCAATGGTaGCTGAAATTGCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLNRQW*LKLLDG
Trigger: ACCATCCAGCAATTTCAGTCACCATTGCCTATTCAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATTCTCAGAGCTCTGGTaGCATCATTCAGTGATACTA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTFSELW*HHSVIL
Trigger: TAGTATCACTGAATGATGTCACCAGAGCTCTGAGAA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTACAACAGTCCTTACTaGCCTGAACCAGATGCCTTT +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEYNSPY*PEPDAF
Trigger: AAAGGCATCTGGTTCAGGTCAGTAAGGACTGTTGTA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATGACACTAAGTTTCACATTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCAATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: MTLSFTLPCTVFDVELLSIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...TGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGGCCTTGTACTGTCTTTaGTGTGGAACTTCTCTCATC +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEALYCL*CGTSLI
Trigger: GATGAGAGAAGTTCCACATCAAAGACAGTACAAGGC...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCTCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000588515.5
ENST00000608815.5
ENST00000609498.5
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCAAATAAGAGTCCTCTaGGTGGAAAGACTGAGGATC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKQIRVL*VERLRI
Trigger: GATCCTCAGTCTTTCCACTCAGAGGACTCTTATTTG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGGTATAATGTCACCCTaGCATAAAGCAACATCAAAA +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKGIMSP*HKATSK
Trigger: TTTTGATGTTGCTTTATGTCAGGGTGACATTATACC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACTTAGAAGGATCTCCTaGAGCCCTGGGTTTGATATA +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLLRRIS*SPGFDI
Trigger: TATATCAAACCCAGGGCTTCAGGAGATCCTTCTAAG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAAATGTTCATGCAAGTaGTCACCAACCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEKCSCK*SPTWRC
Trigger: GCATCTCCAGGTTGGTGATCACTTGCATGAACATTT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAGATCAAAATGGAGCTaGCACTCAGGATCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITRSKWS*HSGSPV
Trigger: TACAGGAGATCCTGAGTGTCAGCTCCATTTTGATCT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGACCTGGCCAAGAAGGTaGAACTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQTWPRR*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACCTTCTTGGCCAGGT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACTGAAGATAGACAAATaGACCAGATCCTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEILKIDK*TRSSQG
Trigger: ACCTTGAGAGGATCTGGTTCATTTGTCTATCTTCAG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAGAACCAAAATAGCTTaGGGACACATGTCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWERTKIA*GHMSPR
Trigger: CCTTGGTGACATGTGTCCTCAAGCTATTTTGGTTCT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTCAGTGCATTTTAAGTaGCAGCTTCTCCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKSVHFK*QLLLLS
Trigger: AGAGAGCAGGAGAAGCTGTCACTTAAAATGCACTGA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGATTAATTCCCAAGTTTaGATTTCTCTGGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKINSQV*ISLGNG
Trigger: GCCATTTCCCAGAGAAATTCAAACTTGGGAATTAAT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGTCAGTTAAGTCACTaGCACTTAGGGAGAAGGGAA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLCQLSH*HLGRRE
Trigger: TTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCACATGCTCCTTTCCTaGTGGAGGCCACTTATACAA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFHMLLS*WRPLIQ
Trigger: TTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAAGAGTGGTGGATTGTaGTGCAACTGGCAATGGAGT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPKSGGL*CNWQWS
Trigger: ACTCCATTGCCAGTTGCAGCACAATCCACCACTCTT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAAGTAGTCTGAGTAAGTaGCTGAGGAAACACTGTTAT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASSLSK*LRKHCY
Trigger: ATAACAGTGTTTCCTCAGGCACTTACTCAGACTACT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATTTTTGCTGGCCTGTTaGACGTACTCGGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPFLLAC*TYSGLC
Trigger: ACACAATCCCGAGTACGTGCAACAGGCCAGCAAAAA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATTTTTGCTGGCCTGTTaGACGTACTCGGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLFLLAC*TYSGLC
Trigger: ACACAATCCCGAGTACGTGCAACAGGCCAGCAAAAA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACATTGTCTAAAATGTTaGTTTGCTGGGACGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPHCLKC*FAGTGS
Trigger: GGACCCCGTCCCAGCAAAGCAACATTTTAGACAATG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR GCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATGCCATCTGGGAACTTTaGAAAATAAGTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHAIWEL*KISPQW
Trigger: CCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGC...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCTGACAAACAGTTCCTaGTTGTTTCTAGATATTGAG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKLTNSS*LFLDIE
Trigger: CTCAATATCTAGAAACAAGCAGGAACTGTTTGTCAG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGCCATTTGCAAATCTATaGCTCCCTTCCCCCAATAAG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEPFANL*LPSPNK
Trigger: CTTATTGGGGGAAGGGAGGCATAGATTTGCAAATGG...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATACAATGGTGGACACCTaGCGTATTTGCTTTAAAATG +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYTMVDT*RICFKM
Trigger: CATTTTAAAGCAAATACGGCAGGTGTCCACCATTGT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAGTTAAAGACCTCCTTTaGCACCTGCTGAAGACTGCA +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLVKDLL*HLLKTA
Trigger: TGCAGTCTTCAGCAGGTGCCAAAGGAGGTCTTTAAC...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCTTCCAAAATTGGCTaGAAGAAATTCAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSSKIG*KKFKKG
Trigger: GCCTTTCTTGAATTTCTTCCAGCCAATTTTGGAAGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTGTCACTGTCTGACTaGAAATCTTCATCACCACGA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLSLSD*KSSSPR
Trigger: TCGTGGTGATGAAGATTTCCAGTCAGACAGTGACAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGTGCTGCAACTGGCAATaGAGTACACATGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQCCNWQ*STHAPF
Trigger: GAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCA...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATTAGAGAGGGAAGAGTaGTGGATTGTGCTGCAACTG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLEREE*WIVLQL
Trigger: CAGTTGCAGCACAATCCACCACTCTTCCCTCTCTAA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCTCATTTCATTAGCTaGATGAACAAAAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYPHFIS*MNKRIL
Trigger: GAGGATTCTTTTGTTCATCCAGCTAATGAAATGAGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAGAGAGGATTACTGTTaGCATTCTCGGCTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLREDYC*HSRLWF
Trigger: AAACCACAGCCGAGAATGCCAACAGTAATCCTCTCT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTATCATGATACTCCCATaGTACGCCTGGAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLIMILP*YAWRKR
Trigger: CCTTTTTCTCCAGGCGTACCATGGGAGTATCATGAT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAGCTTTTTGTTGTTGTaGCCCCTTACTACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEISFLLL*PLTTSV
Trigger: TACGGAAGTAGTAAGGGGCCACAACAACAAAAAGCT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATTGTCATCAGAAGGCTaGAGTTATCATAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEILSSEG*SYHSRA
Trigger: AGCTCTGCTATGATAACTCCAGCCTTCTGATGACAA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTTTCACCGTTTTAGCTaGGATGGTCTCGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFFHRFS*DGLDLL
Trigger: CAGGAGATCGAGACCATCCCAGCTAAAACGGTGAAA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTGGGTATGGTGTTGGTaGGTGATGGGAAATATTCTG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEWVWCW*VMGNIL
Trigger: CAGAATATTTCCCATCACCCACCAACACCATACCCA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAAAAACATGGGGAGTTaGAGGGACGGATCTATAGCA +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKKNMGS*RDGSIA
Trigger: TGCTATAGATCCGTCCCTCCAACTCCCCATGTTTTT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACCAGAACGAAGAGACTaGAGGATATGCCTGAATCTG +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLPERRD*RICLNL
Trigger: CAGATTCAGGCATATCCTCCAGTCTCTTCGTTCTGG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTTTATATCCCAAAACTaGCTATCAAAGATGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKFISQN*LSKMAG
Trigger: ACCAGCCATCTTTGATAGCCAGTTTTGGGATATAAA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTATTGAAGGCTCTGGCTaGATAGGCCATGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFIEGSG*IGHVSI
Trigger: AATGCTGACATGGCCTATCCAGCCAGAGCCTTCAAT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp CAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAG +
Preference number: 4 (lower is better)
Translates to: QPGSPVICPNWY*KVRSPLIKYLK
Trigger: CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR CAA 72 bp CTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTaGAATACTGAGATACTGCTGACACAGAATTCCTTA +
Preference number: 4 (lower is better)
Translates to: LFDSTCRTLNRG*NTEILLTQNSL
Trigger: TAAGGAATTCTGTGTCAGCAGTATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGTAGAGCTTGACAGTTaGACAATTGCTTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIVELDS*TIAWVV
Trigger: AACTACCCAAGCAATTGTTCAACTGTCAAGCTCTAC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAAGTTTTCGTAGAGCTTaGCAGTTGAACAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPSFRRA*QLNNCL
Trigger: CAAGCAATTGTTCAACTGTCAAGCTCTACGAAAACT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAGTGGTTGGCAGATTTaGAAGGTCGTTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSGWQI*KVVIRN
Trigger: ATTCCTGATAACGACCTTTCAAATCTGCCAACCACT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACTCAAATTTTGTATTTaGTCCAGAACTTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLKFCI*SRTSGS
Trigger: GCTGCCTGAAGTTCTGGATCAAATACAAAATTTGAG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGTTAGCAGTTGGATTTaGATTCTCAACACGCACTCC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPVSSWI*ILNTHS
Trigger: GGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAAC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCAGCTAATGAAGGGTaGAGTTCCCCAATCCTCATT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSANEG*SSPILI
Trigger: AATGAGGATTGGGGAACTTCACCCTTCATTAGCTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATCAGCTAATGAAGGGTaGAGTTCCCCAATCCTCATT +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLSANEG*SSPILI
Trigger: AATGAGGATTGGGGAACTTCACCCTTCATTAGCTGA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGGCGGCAGTGGATTTaGGAAAAGACATTACTAAGA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGRQWI*EKTLLR
Trigger: TCTTAGTAATGTCTTTTCTCAAATCCACTGCCGCCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCCTTGTCAGAAGGTTTaGATGGATTTCCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFPCQKV*MDFLVH
Trigger: GTGGACAAGGAAATCCATTCAAACCTTCTGACAAGG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCATGCACAGCCAGAGGCTaGCAATTAAAACTAATACAT +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPCTARG*QLKLIH
Trigger: ATGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCA...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAAGGCATATACAACTTTaGGGCAGTGTTTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIRHIQL*GSVSDG
Trigger: TCCATCAGAAACACTGCCTCAAAGTTGTATATGCCT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATCATCATCAGGGAGTATaGCAGAAAAACGAGCAATTA +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHHHQGV*QKNEQL
Trigger: TAATTGCTCGTTTTTCTGTCATACTCCCTGATGATG...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp TTAGTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTGGATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: LVPDFPSCFIWTYLYDFWIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...CCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR TCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATTTTACTTCATGTaGTACAAGTCCTCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYLFYFM*YKSSLC
Trigger: ACACAGGGAGGACTTGTATCACATGAAGTAAAATAA...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGTGGGATCTATTCATaGAATGATGCCAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGGIYS*NDAKMQ
Trigger: CTGCATTTTGGCATCATTTCATGAATAGATCCCACC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCATTAGGTTTTGGGTaGTTGATACAATCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSLGFG*LIQSER
Trigger: CCTCTCAGATTGTATCAATCACCCAAAACCTAATGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAGCTTAGCTAACCTGTaGCTATCTCTCCGTGATATG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSLANL*LSLRDM
Trigger: CATATCACGGAGAGATAGTCACAGGTTAGCTAAGCT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAGCACCTGCTGAAGACTaGAGTGGGAGTAATCTAAAA +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLAPAED*SGSNLK
Trigger: TTTTAGATTACTCCCACTGCAGTCTTCAGCAGGTGC...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGAATCAGGCAATTGTTaGAACATATTGGATGACAAT +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYESGNC*NILDDN
Trigger: ATTGTCATCCAATATGTTGCAACAATTGCCTGATTC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCTTTAGCTGTTGTCTaGAAGGACCCCACTTTAACC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSLAVV*KDPTLT
Trigger: GGTTAAAGTGGGGTCCTTGCAGACAACAGCTAAAGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTCTTTAGCTGTTGTCTaGAAGGACCCCACTTTAACC +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSLAVV*KDPTLT
Trigger: GGTTAAAGTGGGGTCCTTGCAGACAACAGCTAAAGA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCAAAGAATTATGTACTaGATCTTTAGCTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKQRIMY*IFSCCL
Trigger: CAGACAACAGCTAAAGATGCAGTACATAATTCTTTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGATACTGGACATACCATaGTCTGGTCCCAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQILDIP*SGPSIL
Trigger: TAAGATGCTGGGACCAGAGCATGGTATGTCCAGTAT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGTTCATCTTCATACCTaGCATTCCTTTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIVHLHT*HSFSGT
Trigger: AGTTCCTGAAAAGGAATGGCAGGTATGAAGATGAAC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAATGCTTCTGCCTGCATaGATTGCTGAAATACCTCCA +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLMLLPA*IAEIPP
Trigger: TGGAGGTATTTCAGCAATGCATGCAGGCAGAAGCAT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGCAAGTTTAAAGTCATaGTTCTGCCTGCATGCATTG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLASLKS*FCLHAL
Trigger: CAATGCATGCAGGCAGAAGCATGACTTTAAACTTGC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGATGTCACTGTTGTGCTaGACATATGGTAGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKMSLLC*TYGSEV
Trigger: GACTTCACTACCATATGTGCAGCACAACAGTGACAT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAGATTAAGCCTCTTTTaGTATACTGCTGTGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIRLSLF*YTAVAC
Trigger: ACAAGCCACAGCAGTATAGCAAAAGAGGCTTAATCT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLGSPVI*PNWYLK
Trigger: CTTCAAGTACCAGTTTGGGCATATTACTGGAGATCC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR GCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAG +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIGSPVI*PNWYLK
Trigger: CTTCAAGTACCAGTTTGGGCATATTACTGGAGATCC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTGCCTGTTCTCAGTATaGAACATGGCAGTACTATTG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWECLFSV*NMAVLL
Trigger: CAATAGTACTGCCATGTTGCATACTGAGAACAGGCA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGGTGCCCGCCACCATaGTCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRCPPP*SANFCI
Trigger: AATACAAAAATTAGCTGAGCATGGTGGCGGGCACCT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGCTTCTCATTTCTGCATaGCTTAATCCAGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWELLISA*LNPGPF
Trigger: AAATGGGCCTGGATTAAGGCATGCAGAAATGAGAAG...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGATTGTTCAACTCCTTaGATTTCGGAGTGGGTCATT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLDCSTP*ISEWVI
Trigger: AATGACCCACTCCGAAATGCAAGGAGTTGAACAATC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAATCTAGTGACAATGTaGATGACTTCTTCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: MESRIHKELVCASVLRNYNLVTM*MTSSQR
Trigger: TCTTTGAGAAGAAGTCATGCACATTGTCACTAGATT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGACACCTGCCGTATTTaGTTTAAAATGGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFDTCRI*FKMGGT
Trigger: AGTGCCACCCATTTTAAAGCAAATACGGCAGGTGTC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATTACAAGGACTTCTCTaGTATTGCGGGGGATTCCTT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLQGLL*YCGGFL
Trigger: AAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCAAGTCTTTCCAACTaGGCCAGTTTGTGCATTGAC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSSLSN*ASLCID
Trigger: GTCAATGCACAAACTGGCCCAGTTGGAAAGACTTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGATCATGATACTCCCATaGTACGCCTGGAGAAAAAGG +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQIMILP*YAWRKR
Trigger: CCTTTTTCTCCAGGCGTACCATGGGAGTATCATGAT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCACACAAAACTGCTCTaGATATCCATCCATACTCCT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLHTKLL*ISIHTP
Trigger: AGGAGTATGGATGGATATCCAGAGCAGTTTTGTGTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTGGCTAAAGGAGCTCTaGTTACTTGGCCTTAAGATG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFWLKEL*LLGLKM
Trigger: CATCTTAAGGCCAAGTAACCAGAGCTCCTTTAGCCA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTCTCATCTTTCCTCTaGACTGTGAGATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLLSSFL*TVRFCA
Trigger: AGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIVICPN*YLKVRS
Trigger: ACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAACAGACTTGTTGCCATaGGAACCAGTGCAGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITTDLLP*EPVQKN
Trigger: ATTTTTCTGCACTGGTTCCCATGGCAACAAGTCTGT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACAGTGTTACGTACACTaGACAGATTTCACTAGACAT +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIQCYVH*TDFTRH
Trigger: ATGTCTAGTGAAATCTGTCCAGTGTACGTAACACTG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATCATCCTATAATATCTaGATATGGTGGCTTGACATG +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASSYNI*IWWLDM
Trigger: CATGTCAAGCCACCATATCCAGATATTATAGGATGA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTTGTCACATCAGGAGTaGCAGAGGTGTTTACTAGGA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFLSHQE*QRCLLG
Trigger: TCCTAGTAAACACCTCTGCCACTCCTGATGTGACAA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAGAGGTAGAATCTACTaGAGCCATCATGAATTCCAG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWERGRIY*SHHEFQ
Trigger: CTGGAATTCATGATGGCTCCAGTAGATTCTACCTCT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGTTGACATAATCACATaGTTAAAATCCCAAGGGACT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAVDIIT*LKSQGT
Trigger: AGTCCCTTGGGATTTTAACCATGTGATTATGTCAAC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAACCAGAGGATATAAATaGCTTCACATAAACTTTGGG +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKATRGYK*LHINFG
Trigger: CCCAAAGTTTATGTGAAGCCATTTATATCCTCTGGT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGTATTTGCTTTAAAATaGGTGGCACTGTTGTGTACA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAVFALK*VALLCT
Trigger: TGTACACAACAGTGCCACCCATTTTAAAGCAAATAC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCAATACCTTTCAACCTaGATCTCCAGTAATATGCCC +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLQYLST*ISSNMP
Trigger: GGGCATATTACTGGAGATCCAGGTTGAAAGGTATTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACGATGCTGCTCCCAGTaGTCCTTGTCATTAATTATG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRCCSQ*SLSLIM
Trigger: CATAATTAATGACAAGGACCACTGGGAGCAGCATCG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAGTGGTTGGCAGATTTaGAAGGTCGTTATCAGGAAT +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSGWQI*KVVIRN
Trigger: ATTCCTGATAACGACCTTTCAAATCTGCCAACCACT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACCAAGATCCGCAATTTaGCAAGTCTTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPPRSAI*QVFQNW
Trigger: CCAATTTTGGAAGACTTGTCAAATTGCGGATCTTGG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTACCAAGATCCGCAATTTaGCAAGTCTTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLPRSAI*QVFQNW
Trigger: CCAATTTTGGAAGACTTGTCAAATTGCGGATCTTGG...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGGTAGAGTTTTCAAGTaGTTTTCTCTTAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPGRVFK*FSLNSK
Trigger: CTTGGAGTTAAGAGAAAATCACTTGAAAACTCTACC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATTTCATTAGCTGGATaGACAAAAGAATCCTCCACT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTISLAG*TKESST
Trigger: AGTGGAGGATTCTTTTGTTCATCCAGCTAATGAAAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGGCATATACAACTTTaGGGCAGTGTTTCTGATGGA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRHIQL*GSVSDG
Trigger: TCCATCAGAAACACTGCCTCAAAGTTGTATATGCCT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTACAGCATTTCATATTTTaGCTTGTGCCATCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLQHFIF*LVPSGN
Trigger: GTTCCCAGATGGCACAAGTCAAAATATGAAATGCTG...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAATTAAAAAGGTCAATTaGCCTGCATACCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIIKKVN*PAYLGI
Trigger: AATGCCCAGGTATGCAGGTCAATTGACCTTTTTAAT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACAAATAAGAGTCCTCTaGGTGGAAAGACTACAAGTA +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITQIRVL*VERLQV
Trigger: TACTTGTAGTCTTTCCACTCAGAGGACTCTTATTTG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAATCCCTCATAGTACCTaGTATGTAGTTGATGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLIPHST*YVVDAQ
Trigger: TTGGGCATCAACTACATATCAGGTACTATGAGGGAT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTGTAAATTCTTCTTTTaGCATCTGGAAGAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWECKFFF*HLEEQE
Trigger: CTCCTGCTCTTCCAGATGTCAAAAGAAGAATTTACA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAATACTGAGATACTGCTaGCACAGAATTCCTTATATC +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIILRYC*HRIPYI
Trigger: GATATAAGGAATTCTGTGTCAGCAGTATCTCAGTAT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAGTTTCAGCATAATCTaGGAAGGACCTACATGTTGT +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWESFSII*EGPTCC
Trigger: ACAACATGTAGGTCCTTCTCAGATTATGCTGAAACT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACTGGATATGGTGGCTTaGCATGAGTTTTCAACAAAG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLDMVA*HEFSTK
Trigger: CTTTGTTGAAAACTCATGTCAAGCCACCATATCCAG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTGTTTACTAGGATTATaGTCCTTTCAGCTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWECLLGL*SFQLCV
Trigger: GACACACAGCTGAAAGGATCATAATCCTAGTAAACA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAGGTCCAGAAACAACTaGGATTGTTTTACATCTATG +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTRSRNN*DCFTSM
Trigger: CATAGATGTAAAACAATCTCAGTTGTTTCTGGACCT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGATTTAGCATTTCTGTaGAAGGAACTACAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKDLAFL*KELQWN
Trigger: GTTCCACTGTAGTTCCTTTCACAGAAATGCTAAATC...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAATTTGTGGAAGTATTaGCAGAGCTGCAGAGGTATC +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLNLWKY*QSCRGI
Trigger: GATACCTCTGCAGCTCTGTCAATACTTCCACAAATT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACCAACCCAGCCTAGATaGTATTTCCATTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLPTQPR*YFHLLY
Trigger: GTACAACAAATGGAAATATCATCTAGGCTGGGTTGG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAAGTTGCATTTCTTACTaGACTCTGGTGGGTCTATTA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKISCISY*TLVGLL
Trigger: TAATAGACCCACCAGAGTTCAGTAAGAAATGCAACT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATATATTATACTTGCCTaGGGATCACCAGAAGGATTT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTYIILA*GSPEGF
Trigger: AAATCCTTCTGGTGATCCTCAGGCAAGTATAATATA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGAAGGGAAAGCCATCTaGACCAAAATATTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLEGKAI*TKIFSL
Trigger: AAGACTGAATATTTTGGTTCAGATGGCTTTCCCTTC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTACCTCAGTTGCGAACTaGGGAAAGTTGTTTATAGAA +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLTSVAN*GKLFIE
Trigger: TTCTATAAACAACTTTCCTCAGTTCGCAACTGAGGT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAGAGGAAAATCTGCTTaGGTGTTCCATTGCCTTATT +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKRGKSA*VFHCLI
Trigger: AATAAGGCAATGGAACACTCAAGCAGATTTTCCTCT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGTTATTCCTGTCTCTaGAGACTTCTAGGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSYSCL*RLLGCD
Trigger: GTCACAACCTAGAAGTCTGCAGAGACAGGAATAACT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATTAGTCAATACTCTTTaGTTTGTTTCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTLVNTL*FVSGWA
Trigger: AGCCCATCCAGAAACAAAGCAAAGAGTATTGACTAA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGTTCATCTTCATACCTaGCATTCCTTTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLVHLHT*HSFSGT
Trigger: AGTTCCTGAAAAGGAATGGCAGGTATGAAGATGAAC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATTCTCACACAAAACTaGTCTGGATATCCATCCATA +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTILTQN*SGYPSI
Trigger: TATGGATGGATATCCAGAGCAGTTTTGTGTGAGAAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAAAACTGTGTCCATTTaGCTGAAGGATCTTATCACC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKKTVSI*LKDLIT
Trigger: GGTGATAAGATCCTTCAGGCAAATGGACACAGTTTT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATTTGGCACTAATGTTTaGCATTGGTCCAGCAATTGG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPFGTNV*HWSSNW
Trigger: CCAATTGCTGGACCAATGGCAAACATTAGTGCCAAA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATAAGTGCAATGTGTCCTaGTCACACCTGTTTTATAAA +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHKCNVS*SHLFYK
Trigger: TTTATAAAACAGGTGTGAGCAGGACACATTGCACTT...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGCATTGTCTAAAATGTTaGTTTGCTGGGACGGGGTTT +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQHCLKC*FAGTGF
Trigger: AAACCCCGTCCCAGCAAAGCAACATTTTAGACAATG...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGTAGTAAAAGGATTATaGCCCAAAATAACTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTVVKGL*PKITEV
Trigger: GACCTCAGTTATTTTGGGGCATAATCCTTTTACTAC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGAGTCATACTTTCTCTaGCAACAGACTTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPESYFL*QQTCCH
Trigger: ATGGCAACAAGTCTGTTGGCAGAGAAAGTATGACTC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGAGTCATACTTTCTCTaGCAACAGACTTTCAACCTG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFESYFL*QQTFNL
Trigger: CAGGTTGAAAGTCTGTTGGCAGAGAAAGTATGACTC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATTTCAGATGTTTCATTaGCACCAAACTACAGCCATG +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLFQMFH*HQTTAM
Trigger: CATGGCTGTAGTTTGGTGGCAATGAAACATCTGAAA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTCCACCTTTTGAGGTaGTGCCATAACAAAATTAGG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLFHLLR*CHNKIR
Trigger: CCTAATTTTGTTATGGCAGCACCTCAAAAGGTGGAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTGGCGTTTATTGTAGATaGCTAGTTATTGCCAGATGG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFGVYCR*LVIARW
Trigger: CCATCTGGCAATAACTAGGCATCTACAATAAACGCC...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTACAAACCCAAAATGGTaGACTAAAATTGGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLTNPKW*TKIGRL
Trigger: AAGCCTGCCAATTTTAGTGCACCATTTTGGGTTTGT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAGTTGGGCCAAAGTCTaGATGAAGCTATTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQSWAKV*MKLLSH
Trigger: ATGAGACAATAGCTTCATGCAGACTTTGGCCCAACT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCTTCCAAAATTGGCTaGAAGAAATTCAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSSKIG*KKFKKG
Trigger: GCCTTTCTTGAATTTCTTCCAGCCAATTTTGGAAGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATTCTTCCAAAATTGGCTaGAAGAAATTCAAGAAAGGC +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHSSKIG*KKFKKG
Trigger: GCCTTTCTTGAATTTCTTCCAGCCAATTTTGGAAGA...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGCTTTTTGTTGTTGTaGCCCCTTACTACTTCCGTA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSFLLL*PLTTSV
Trigger: TACGGAAGTAGTAAGGGGCCACAACAACAAAAAGCT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATATTTGCTATACTGCTGTaGCTTGTTGGTTCTTCCATA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIFAILL*LVGSSI
Trigger: TATGGAAGAACCAACAAGCCACAGCAGTATAGCAAA...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATTTGTTTTGAATTaGCTAGAGTACACCCAAGTA +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAQFVLN*LEYTQV
Trigger: TACTTGGGTGTACTCTAGCCAATTCAAAACAAATTG...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGTACTGTCTTTGATGTaGAACTTCTCTCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIVLSLM*NFSHLS
Trigger: GGAAAGATGAGAGAAGTTCCACATCAAAGACAGTAC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGATAACTTTTCCAGTTaGTCAAGGATCCCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITDNFSS*SRIPFL
Trigger: GAGAAAAGGGATCCTTGACCAACTGGAAAAGTTATC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAACGGAAAGACAAGGTaGCAAGCACACTACATTTTC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQNGKTR*QAHYIF
Trigger: GAAAATGTAGTGTGCTTGCCACCTTGTCTTTCCGTT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGATGAGGGGTAGAAATTaGTTAGGGACAGCGTTAAGA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQMRGRN*LGTALR
Trigger: TCTTAACGCTGTCCCTAACCAATTTCTACCCCTCAT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCCTTTTGCAATAGGATaGTTGAGGGCAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFPFAIG*LRAGIK
Trigger: CTTTATTCCTGCCCTCAACCATCCTATTGCAAAAGG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATATCTGGTGATCATGTaGCTAGAAGGAAATTGTTTT +
Preference number: 4 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAYLVIM*LEGNCF
Trigger: AAAACAATTTCCTTCTAGCCACATGATCACCAGATA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCTGTATCCAAAACAATaGTGGACACCTGCCGTATTT +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFLYPKQ*WTPAVF
Trigger: AAATACGGCAGGTGTCCACCATTGTTTTGGATACAG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCACAATCTCCATTTTCA +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSP*IKYLKAQSPFS
Trigger: TGAAAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
3UTR CAA 72 bp GTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTaGTACGATTTTTGGGTCTTTCTTTGGAAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: VPDFPSCFIWTY*YDFWVFLWKRV
Trigger: AACTCTTTTCCAAAGAAAGACCCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGTTTTCGTAGAGCTTaGCAGTTGAACAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSFRRA*QLNNCL
Trigger: CAAGCAATTGTTCAACTGTCAAGCTCTACGAAAACT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACTGTTATTCAGACAGTaGGTTTTGTCAACTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPLLFRQ*VLSTSD
Trigger: GTCTGAAGTTGACAAAACTCACTGTCTGAATAACAG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATGCACAGCCAGAGGCTaGCAATTAAAACTAATACAT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPCTARG*QLKLIH
Trigger: ATGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGTAGACCACAGCTCTaGGAAATTATATTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGRPQL*EIIFEV
Trigger: AACTTCAAATATAATTTCTCAGAGCTGTGGTCTACC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR TCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATCACATTTTCTAAGTTaGTGCGCAATGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLSHFLS*CAMTLS
Trigger: ACTTAGTGTCATTGCGCATCAACTTAGAAAATGTGA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATATTGTTAAGTATTGTCTaGTCCTCTCTCTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKILLSIV*SSLSKS
Trigger: GCTTTTTGAGAGAGAGGATCAGACAATACTTAACAA...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTTGTTAAGTATTGTCTaGTCCTCTCTCTCAAAAAGC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKLLSIV*SSLSKS
Trigger: GCTTTTTGAGAGAGAGGATCAGACAATACTTAACAA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR TCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTCTGAATCTGAATTCTaGAATCCAATAAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSESEF*NPIKRL
Trigger: CAGGCGTTTTATTGGATTTCAGAATTCAGATTCAGA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCTTTTCCTCATTTCTaGACTGCAGAACAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSFPHF*TAEQEV
Trigger: TACTTCCTGTTCTGCAGTTCAGAAATGAGGAAAAGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATGCATAACTTTTTATTaGCCCAGTGTGCCAATAAAC +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITCITFY*PSVPIN
Trigger: GTTTATTGGCACACTGGGTCAATAAAAAGTTATGCA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAGAAGGTTCAGGATATaGCTGGAAAACTTGATTGCA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFRRFRI*LENLIA
Trigger: TGCAATCAAGTTTTCCAGTCATATCCTGAACCTTCT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGATACATGGTATGTGTaGTCCAATCTCATGCAAACA +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLDTWYV*SNLMQT
Trigger: TGTTTGCATGAGATTGGATCACACATACCATGTATC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGAAATTAAGGTCCCATaGGGTAATAAAGGGATTGTG +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLEIKVP*GNKGIV
Trigger: CACAATCCCTTTATTACCTCATGGGACCTTAATTTC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGTGACTATCTCTCCGTaGTATGATTTATTCAGGATG +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQVTISP*YDLFRM
Trigger: CATCCTGAATAAATCATATCACGGAGAGATAGTCAC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTAGTCAATACTCTTTaGTTTGTTTCTGGATGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLVNTL*FVSGWA
Trigger: AGCCCATCCAGAAACAAAGCAAAGAGTATTGACTAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATTTTCTTTCACAGTTTaGTCCGTGTTAGCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLFSFTV*SVLAVG
Trigger: TCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAAAACTGTGTCCATTTaGCTGAAGGATCTTATCACC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPKTVSI*LKDLIT
Trigger: GGTGATAAGATCCTTCAGGCAAATGGACACAGTTTT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAAAACTGTGTCCATTTaGCTGAAGGATCTTATCACC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQKTVSI*LKDLIT
Trigger: GGTGATAAGATCCTTCAGGCAAATGGACACAGTTTT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTATGAAAGATAATGCATaGAACCAACTCCGGGAAATT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLMKDNA*NQLREI
Trigger: AATTTCCCGGAGTTGGTTGCATGCATTATCTTTCAT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATCTATGCAAATTGAAATaGTATAAGCCATTGAACTGC +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHLCKLK*YKPLNC
Trigger: GCAGTTCAATGGCTTATAGCATTTCAATTTGCATAG...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAAAATATGCTCTTTGTaGAGTGTTACGTACACTGGA +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITKICSL*SVTYTG
Trigger: TCCAGTGTACGTAACACTGCACAAAGAGCATATTTT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAGAATGTTTACATAAATaGTGCGTGAATTTCACAACC +
Preference number: 4 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPECLHK*CVNFTT
Trigger: GGTTGTGAAATTCACGCAGCATTTATGTAAACATTC...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAAAAGCTATACCCAGATaGACACATATTCAGATTGGA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIKAIPR*THIQIG
Trigger: TCCAATCTGAATATGTGTGCATCTGGGTATAGCTTT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACCTCATTTCATTAGCTaGATGAACAAAAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIPHFIS*MNKRIL
Trigger: GAGGATTCTTTTGTTCATCCAGCTAATGAAATGAGG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAACTAATGTTTGCCATTaGTCCAGCAATTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLTNVCH*SSNWQN
Trigger: ATTTTGCCAATTGCTGGACCAATGGCAAACATTAGT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATAAAATAAGTCCACAATaGAACATCATCAGGGAGTAT +
Preference number: 4 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHKISPQ*NIIREY
Trigger: ATACTCCCTGATGATGTTCCATTGTGGACTTATTTT...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATTCAAGTTCTTTCTCTaGCTAAAGGAGCTCTGGTTA +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPFKFFL*LKELWL
Trigger: TAACCAGAGCTCCTTTAGCCAGAGAAAGAACTTGAA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAAACCCTATAAAATCATaGTATAATGTCACCCTGACA +
Preference number: 4 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEINPIKS*YNVTLT
Trigger: TGTCAGGGTGACATTATACCATGATTTTATAGGGTT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCAAAATCTCACCTGTaGAAATTTGACCCAGACCTT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSKSHL*KFDPDL
Trigger: AAGGTCTGGGTCAAATTTCCACAGGTGAGATTTTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACTCTTTAGAACAAATTaGCAAAATTCTCGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKILFRTN*QNSRSS
Trigger: AGAGGAGCGAGAATTTTGCCAATTTGTTCTAAAGAG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGCTTCACATAAACTTTaGGAAAGAACACCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITASHKL*ERTPCL
Trigger: AAGACAAGGTGTTCTTTCCCAAAGTTTATGTGAAGC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAAAAAGGGTTACTCCTTaGAAAGACAGAGTCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIKRVTP*KDRVKK
Trigger: TTTCTTGACTCTGTCTTTCCAAGGAGTAACCCTTTT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACACTTCATCACAAAATaGCAGCTAATTTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPHFITK*QLIFQT
Trigger: GGTCTGGAAAATTAGCTGCCATTTTGTGATGAAGTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAAATCTAAAACTGAGATaGTTTCTTCTTCACCTCGGA +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLNLKLR*FLLHLG
Trigger: TCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATT...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAGGTAGAGTTTTCAAGTaGTTTTCTCTTAACTCCAAG +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLGRVFK*FSLNSK
Trigger: CTTGGAGTTAAGAGAAAATCACTTGAAAACTCTACC...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR TCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGTTTCAGTATGGCTTTTaGCCTGGTTATGTTGTATTC +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQFQYGF*PGYVVF
Trigger: GAATACAACATAACCAGGTCAAAAGCCATACTGAAA...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGTTCTTAGGGAAGGTTaGCATAATCACATGGTTAAA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQVLREG*HNHMVK
Trigger: TTTAACCATGTGATTATGTCAACCTTCCCTAAGAAC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR TCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTTAACCACAGTTCCTaGTGTTTAAGTTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLLNHSS*CLSFGK
Trigger: CTTTCCAAAACTTAAACATCAGGAACTGTGGTTAAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGATTCTCACACAAAACTaGTCTGGATATCCATCCATA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQILTQN*SGYPSI
Trigger: TATGGATGGATATCCAGAGCAGTTTTGTGTGAGAAT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTATCATATTTTGACTTGTaGCATCTGGGAACTTTGCAA +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLSYFDL*HLGTLQ
Trigger: TTGCAAAGTTCCCAGATGGCACAAGTCAAAATATGA...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAATGAATTTGCTGTACTaGATTAGGCATCAGCAAGAT +
Preference number: 4 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLMNLLY*IRHQQD
Trigger: ATCTTGCTGATGCCTAATGCAGTACAGCAAATTCAT...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAAAGGTCAATTGACCTaGATACCTGGGCATTATTTA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQKGQLT*IPGHYL
Trigger: TAAATAATGCCCAGGTATGCAGGTCAATTGACCTTT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGATGTTAAAGAGAAATaGCCAAACATTATAAAGCCG +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITDVKEK*PNIIKP
Trigger: CGGCTTTATAATGTTTGGGCATTTCTCTTTAACATC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAGGCTATTTGTTAGGCTaGTTATTCAACCTGTTATTT +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLGYLLG*LFNLLF
Trigger: AAATAACAGGTTGAATAAGCAGCCTAACAAATAGCC...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTTTTTATATTATACTTaGCTGAGGATCACCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWEFLYYT*LRITRR
Trigger: CCTTCTGGTGATCCTCAGGCAAGTATAATATAAAAA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAACTTCCAATTTCTCTaGGTAATTCTGGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLNFQFL*VILEGN
Trigger: ATTTCCTTCCAGAATTACCCAGAGAAATTGGAAGTT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCTCACTTATGACTTCTaGATCTATTTGTTAGAGTTC +
Preference number: 4 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKLTYDF*IYLLEF
Trigger: GAACTCTAACAAATAGATCCAGAAGTCATAAGTGAG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACTTAGTTTGTACAAGTaGTGCATCTTGGAAAATAGA +
Preference number: 4 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLLSLYK*CILENR
Trigger: TCTATTTTCCAAGATGCACCACTTGTACAAACTAAG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGTAAATGTTTTCCTGTaGAGGAAGTACAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPVNVFL*RKYKSL
Trigger: CAAACTCTTGTACTTCCTCCACAGGAAAACATTTAC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGACGATTCTACAAGTATaGCTGAAGATTTATATCCCA +
Preference number: 4 (lower is better)
Translates to: SFYFEINRPDSISIKVWETILQV*LKIYIP
Trigger: TGGGATATAAATCTTCAGCCATACTTGTAGAATCGT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATATAAGTATATATTTTaGGGTATAGGTGAACCTGCG +
Preference number: 4 (lower is better)
Translates to: FKGTISIFKCKHAAQSITYKYIF*GIGEPA
Trigger: CGCAGGTTCACCTATACCCCAAAATATATACTTATA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp GATATGACTGGAAAACTTGATTGCATCTACCTTAGTTaGTACAAGTGGTGCATCTTGGAAAATAGATTTCCT +
Preference number: 4 (lower is better)
Translates to: DMTGKLDCIYLS*YKWCILENRFP
Trigger: AGGAAATCTATTTTCCAAGATGCACCACTTGTACAAACTAAGGTAGATGCAATCAAGTTTTCCAGTCATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp TTAAGTGATCTTATGAGGCCAGTAAAGGCCTCTGTCTaGATTAATGATGATCATCCTATAATATCTGGATAT +
Preference number: 4 (lower is better)
Translates to: LSDLMRPVKASV*INDDHPIISGY
Trigger: ATATCCAGATATTATAGGATGATCATCATTAATCAAGACAGAGGCCTTTACTGGCCTCATAAGATCACTTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp TTCATTACTGAAGCCTTTGACAATCTCAATGAGTTCTaGAAATGTCAAAAGCTCGTTAATTTCCTTTATCCC +
Preference number: 4 (lower is better)
Translates to: FITEAFDNLNEF*KCQKLVNFLYP
Trigger: GGGATAAAGGAAATTAACGAGCTTTTGACATTTCAAGAACTCATTGAGATTGTCAAAGGCTTCAGTAATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
3UTR CAA 72 bp CTTGTTTTCTTTCTCACTTATGACTTCTGGATCTATTaGTTAGAGTTCATTACTGAAGCCTTTGACAATCTC +
Preference number: 4 (lower is better)
Translates to: LVFFLTYDFWIY*LEFITEAFDNL
Trigger: GAGATTGTCAAAGGCTTCAGTAATGAACTCTAACAAATAGATCCAGAAGTCATAAGTGAGAAAGAAAACAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR GCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACAAAGAATTATGTACTaGATCTTTAGCTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPQRIMY*IFSCCL
Trigger: CAGACAACAGCTAAAGATGCAGTACATAATTCTTTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR GCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGAATGTTCTATCACTTaGTGTTTGATAGTACATGCA +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQECSIT*CLIVHA
Trigger: TGCATGTACTATCAAACAGCAAGTGATAGAACATTC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAATTGTTGCAACATATTaGATGACAATAAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPIVATY*MTIRGP
Trigger: AGGACCTCTTATTGTCATCCAATATGTTGCAACAAT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CCA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAATTGTTGCAACATATTaGATGACAATAAGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SLEENLLECSIALLVTDLIVATY*MTIRGP
Trigger: AGGACCTCTTATTGTCATCCAATATGTTGCAACAAT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGAACTTCCAATTTCTCTaGGTAATTCTGGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQNFQFL*VILEGN
Trigger: ATTTCCTTCCAGAATTACCCAGAGAAATTGGAAGTT...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGCATTGGTCCAGCAATTaGCAAAATTTGTTTCTATGT +
Preference number: 4 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQHWSSN*QNLFLC
Trigger: ACATAGAAACAAATTTTGCCAATTGCTGGACCAATG...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAATATCTGGATATGGTaGCTTGACATGAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFNIWIW*LDMSFQ
Trigger: TTGAAAACTCATGTCAAGCCACCATATCCAGATATT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CCA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTGTTCAAAGAGACATTaGCATTCTTTTACCCATGTA +
Preference number: 4 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFCSKRH*HSFTHV
Trigger: TACATGGGTAAAAGAATGCCAATGTCTCTTTGAACA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp CCCGAGTGGGCGGCTGCAGGTCCCGCCGGCGAGAACCCGCTGCACTaGGGCTGGGTGTCCGTGGCTTCAAGCCCGGTGTTCACCCGGAGT +
Preference number: 5 (lower is better)
Translates to: PEWAAAGPAGENPLH*GWVSVASSPVFTRS
Trigger: ACTCCGGGTGAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTGCAGCCGCCCACTCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp TGGGCGGCTGCAGGTCCCGCCGGCGAGAACCCGCTGCACTGGGGCTaGGTGTCCGTGGCTTCAAGCCCGGTGTTCACCCGGAGTAGGGTC +
Preference number: 5 (lower is better)
Translates to: WAAAGPAGENPLHWG*VSVASSPVFTRSRV
Trigger: GACCCTACTCCGGGTGAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTGCAGCCGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp CAGGTCCCGCCGGCGAGAACCCGCTGCACTGGGGCTGGGTGTCCGTaGCTTCAAGCCCGGTGTTCACCCGGAGTAGGGTCCTCCTCGGTG +
Preference number: 5 (lower is better)
Translates to: QVPPARTRCTGAGCP*LQARCSPGVGSSSV
Trigger: CACCGAGGAGGACCCTACTCCGGGTGAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp GGTGCCACGTTAGACCATGATGCCAGTGCCCTTCAGGTGGACGGCTaGAGAGGTTCCCGCGGGAAGCGGCTGAGGGGAAGCCCGAAGCGC +
Preference number: 5 (lower is better)
Translates to: GATLDHDASALQVDG*RGSRGKRLRGSPKR
Trigger: GCGCTTCGGGCTTCCCCTCAGCCGCTTCCCGCGGGAACCTCTCCAGCCGTCCACCTGAAGGGCACTGGCATCATGGTCTAACGTGGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp GAACAGGAGATAGAGGGGAATCCAGGAAGGTGCCACGTTAGACCATaGTGCCAGTGCCCTTCAGGTGGACGGCTGGAGAGGTTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: EQEIEGNPGRCHVRP*CQCPSGGRLERFPR
Trigger: CCGCGGGAACCTCTCCAGCCGTCCACCTGAAGGGCACTGGCATCATGGTCTAACGTGGCACCTTCCTGGATTCCCCTCTATCTCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS CCA 90 bp GCTGCCAAGGGTTATTCCTTAAGTGTTCAGGGGTCCGCAGTGGAGTaGGCGCCAGGGTCTTCGGAGGAGAAGAGGAGGGAAGGAGTAGAA +
Preference number: 5 (lower is better)
Translates to: AAKGYSLSVQGSAVE*APGSSEEKRREGVE
Trigger: TTCTACTCCTTCCCTCCTCTTCTCCTCCGAAGACCCTGGCGCCCACTCCACTGCGGACCCCTGAACACTTAAGGAATAACCCTTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000651989.2
CDS CCA 90 bp CAGCAATCGCCAGACAGTCTGGCAGGTTGGAGAGTAATCCCACGCTaGCCCCTTTCCCAGGGGGCTTGGCAGGAGAGATCCTTAACTTTC +
Preference number: 5 (lower is better)
Translates to: QQSPDSLAGWRVIPR*PLSQGAWQERSLTF
Trigger: GAAAGTTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAGGGGCCAGCGTGGGATTACTCTCCAACCTGCCAGACTGTCTGGCGATTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp GGTCATTCTGGGGGACGGGCATATCTTGGATCTGCTGATCACACCTaGCCCATGGTGTGCAGCAATCGCCAGACAGTCTGGCAGGTTGGA +
Preference number: 5 (lower is better)
Translates to: GHSGGRAYLGSADHT*PMVCSNRQTVWQVG
Trigger: TCCAACCTGCCAGACTGTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCCCAGAATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS TCA 90 bp CCCCTTATTAGGTTCTCCATCATCGCCGGCGGGAGAAACTGCCCATaGGGTTTCGGAGAGCGTAGTCGTGCAGCTGCCAAGGGTTATTCC +
Preference number: 5 (lower is better)
Translates to: PLIRFSIIAGGRNCP*GFGERSRAAAKGYS
Trigger: GGAATAACCCTTGGCAGCTGCACGACTACGCTCTCCGAAACCTCATGGGCAGTTTCTCCCGCCGGCGATGATGGAGAACCTAATAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000651989.2
CDS CCA 90 bp CTGGGGGACGGGCATATCTTGGATCTGCTGATCACACCTGGCCCATaGTGTGCAGCAATCGCCAGACAGTCTGGCAGGTTGGAGAGTAAT +
Preference number: 5 (lower is better)
Translates to: LGDGHILDLLITPGP*CAAIARQSGRLESN
Trigger: ATTACTCTCCAACCTGCCAGACTGTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGCCCGCCCTGGCCCCTaGGCTTGCGAACTGGGCATT +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLARPGP*ACELGI
Trigger: AATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp TTGTTTATATTTCCTTCATACGGCTGCTGCTCCCGGCTGCGATGCTaGAGGCTTTGGGACCCCATCAACGTCTGGATGTGGCTGCCTGCC +
Preference number: 5 (lower is better)
Translates to: LFIFPSYGCCSRLRC*RLWDPINVWMWLPA
Trigger: GGCAGGCAGCCACATCCAGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAATATAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp GCTCCTTTCCTGCTGGAGGCCACTTATACAACCCCATGCCAGCTGTaGGTCATTCTGGGGGACGGGCATATCTTGGATCTGCTGATCACA +
Preference number: 5 (lower is better)
Translates to: APFLLEATYTTPCQL*VILGDGHILDLLIT
Trigger: TGTGATCAGCAGATCCAAGATATGCCCGTCCCCCAGAATGACCCACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCAGGACTTCTCTGGTATaGCGGGGGATTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: HILCCRCHCIVSGDWARGRTSLV*RGIPSP
Trigger: AGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCT...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACCCTGGCCCCTTGGCTaGCGAACTGGGCATTCACCA +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKPWPLG*RTGHSP
Trigger: TGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS GCA 90 bp GTGGATTGTGCTGCAACTGGCAATGGAGTACACATGCTCCTTTCCTaGTGGAGGCCACTTATACAACCCCATGCCAGCTGTGGGTCATTC +
Preference number: 5 (lower is better)
Translates to: VDCAATGNGVHMLLS*WRPLIQPHASCGSF
Trigger: GAATGACCCACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCACAATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS GCA 90 bp AGGGAAGAGTGGTGGATTGTGCTGCAACTGGCAATGGAGTACACATaGTCCTTTCCTGCTGGAGGCCACTTATACAACCCCATGCCAGCT +
Preference number: 5 (lower is better)
Translates to: REEWWIVLQLAMEYT*SFPAGGHLYNPMPA
Trigger: AGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCACAATCCACCACTCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS GCA 90 bp TCCAGCATTGGGACTGACTGGCTTCGAGACATACTGGACATACCATaGTCTGGTCCCAGCATCTTATCCGGTCGTTCGTGGCTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: SSIGTDWLRDILDIP*SGPSILSGRSWLPK
Trigger: CTTAGGAAGCCACGAACGACCGGATAAGATGCTGGGACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 90 bp TGGTCACTTTGTTTATATTTCCTTCATACGGCTGCTGCTCCCGGCTaGGATGCTGAAGGCTTTGGGACCCCATCAACGTCTGGATGTGGC +
Preference number: 5 (lower is better)
Translates to: WSLCLYFLHTAAAPG*DAEGFGTPSTSGCG
Trigger: GCCACATCCAGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAATATAAACAAAGTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp GATTGTGCTGCAACTGGCAATGGAGTACACATGCTCCTTTCCTGCTaGAGGCCACTTATACAACCCCATGCCAGCTGTGGGTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: DCAATGNGVHMLLSC*RPLIQPHASCGSFW
Trigger: CCAGAATGACCCACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAACACTGTAACGCTGCTTaGGCGATCCAGCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKHCNAA*AIQPSP
Trigger: AGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGTG...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp TTTCTTCTTCACCTCGGAAACATCGGCATGGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCATCTCCAGGCACTGCAACTCCTCTT +
Preference number: 5 (lower is better)
Translates to: FLLHLGNIGMAPDGR*FSVWWSSPGTATPL
Trigger: AAGAGGAGTTGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGAGGTGAAGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370958.5
ENST00000651989.2
CDS GCA 90 bp TTTCATGTAGCGGGCTCACTCCTCTTCAGGCCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGGACTTCTCTGGTATTGCGGGGGATT +
Preference number: 5 (lower is better)
Translates to: FHVAGSLLFRPLPKC*TNLFTRTSLVLRGI
Trigger: AATCCCCCGCAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCTGAAGAGGAGTGAGCCCGCTACATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS CCA 90 bp TCTGGTCCAATTCTGCCAAGGATTGGAAGGAGGCACTTCTGTTTCTaGTGTGTGTCTGTGTGTAGACTGCTCGAGTTCCAGGGGAACACC +
Preference number: 5 (lower is better)
Translates to: SGPILPRIGRRHFCF*CVSVCRLLEFQGNT
Trigger: GGTGTTCCCCTGGAACTCGAGCAGTCTACACACAGACACACACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 90 bp TTTCTTCTTCACCTCGGAAACATCGGCATGGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCATCTCCAGGCACTGCATTGCTAGTT +
Preference number: 5 (lower is better)
Translates to: FLLHLGNIGMAPDGR*FSVWWSSPGTALLV
Trigger: AACTAGCAATGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGAGGTGAAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS TCA 90 bp CTTACTACTTCCGTAGGTGAGCATCTCATCATCCAGCATTGGGACTaGCTGGCTTCGAGACATACTGGACATACCATGCTCTGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LTTSVGEHLIIQHWD*LASRHTGHTMLWSQ
Trigger: CTGGGACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCTGGATGATGAGATGCTCACCTACGGAAGTAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 90 bp TTTCTTCTTCACCTCGGAAACATCGGCATGGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCATCTCCAGGCACTGCACTAGAGAAA +
Preference number: 5 (lower is better)
Translates to: FLLHLGNIGMAPDGR*FSVWWSSPGTALEK
Trigger: TTTCTCTAGTGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGAGGTGAAGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651217.1
CDS GCA 90 bp TTGGAAGGAGGCACTTCTGTTTCTGGTGTGTGTCTGTGTGTAGACTaGTCGAGTTCCAGGGGAACACCAACAATCCTGTCTTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: LEGGTSVSGVCLCVD*SSSRGTPTILSCLI
Trigger: GATCAGGCAAGACAGGATTGTTGGTGTTCCCCTGGAACTCGAGCAGTCTACACACAGACACACACCAGAAACAGAAGTGCCTCCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 90 bp AAAGCGGTCCTGTCTTCAAACGGACTAGGGGTTCTGGTCCAATTCTaGCAAGGATTGGAAGGAGGCACTTCTGTTTCTGGTGTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KAVLSSNGLGVLVQF*QGLEGGTSVSGVCL
Trigger: CAGACACACACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAACCCCTAGTCCGTTTGAAGACAGGACCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp GGCCTCTTCCGAAGTGCTGCACGAACCTCTTTACAAGGACTTCTCTaGTATTGCGGGGGATTCCTTCCCCTTATTAGGTTCTCCATCATC +
Preference number: 5 (lower is better)
Translates to: GLFRSAARTSLQGLL*YCGGFLPLIRFSII
Trigger: GATGATGGAGAACCTAATAAGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000651989.2
CDS CCA 90 bp TTGGGAGGCACCGTAACTCTCTGTACTGTAGCTTCTCGCAGACAATaGCCTCCTTTGGGTAAGGTTTTTAACCGGAAAACTTCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: LGGTVTLCTVASRRQ*PPLGKVFNRKTSRL
Trigger: CAGGCGGGAAGTTTTCCGGTTAAAAACCTTACCCAAAGGAGGCCATTGTCTGCGAGAAGCTACAGTACAGAGAGTTACGGTGCCTCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAACAACCCCTGCCCGTaGCCGCGCCTGTGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWENNPCP*PRLCRA
Trigger: CGCCCTGCACAGGCGCGGCAACGGGCAGGGGTTGTT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp TTGGCACCTGCTGAAGACTGCAGTGGGAGTAATCTAAAACTGAGATaGTTTCTTCTTCACCTCGGAAACATCGGCATGGCACCAGACGGC +
Preference number: 5 (lower is better)
Translates to: LAPAEDCSGSNLKLR*FLLHLGNIGMAPDG
Trigger: GCCGTCTGGTGCCATGCCGATGTTTCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATTACTCCCACTGCAGTCTTCAGCAGGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 90 bp CAAACCCTGTGTTGTCATAATGCGAGCCATCAGTCCAGTTGTCAGTaGAAGTATCACTCATGGGCAGCCGGTCAGGACGCTGTGGTATAT +
Preference number: 5 (lower is better)
Translates to: QTLCCHNASHQSSCQ*KYHSWAAGQDAVVY
Trigger: ATATACCACAGCGTCCTGACCGGCTGCCCATGAGTGATACTTTCACTGACAACTGGACTGATGGCTCGCATTATGACAACACAGGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp TGCCTTCTTAGTAATGGTGTCCGGAGGTACATCCCGCCTCCCAAGTaGATAAGGATTCCATTGGCCACTAGGAGATACATCTTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: CLLSNGVRRYIPPPK*IRIPLATRRYIFLS
Trigger: GGACAAGAAGATGTATCTCCTAGTGGCCAATGGAATCCTTATCCACTTGGGAGGCGGGATGTACCTCCGGACACCATTACTAAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGACGCTGTGGTATATaGCCTGGGGGAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYGRCGI*PGGTAS
Trigger: GGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTCTCATCATCCAGCATaGGGACTGACTGGCTTCGAG +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLSHHPA*GLTGFE
Trigger: CTCGAAGCCAGTCAGTCCCAATGCTGGATGATGAGA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCACTGTAACGCTGCTTaGGCGATCCAGCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYHCNAA*AIQPSP
Trigger: AGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTGCCAACAGACTTGTaGCCATGGGAACCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELPTDL*PWEPVQ
Trigger: CTGCACTGGTTCCCATGGCAACAAGTCTGTTGGCAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp CTCCACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTaGGCAAGGGGCACACTCTGGATCTTCAGATGTTTGGTAGAGTTT +
Preference number: 5 (lower is better)
Translates to: LHILCCRCHCIVSGD*ARGTLWIFRCLVEF
Trigger: AAACTCTACCAAACATCTGAAGATCCAGAGTGTGCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGTACTCGGGATTGTGTaGAAAAGGGGGTGGTATCCT +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKVLGIV*KRGWYP
Trigger: AGGATACCACCCCCTTTTCAACACAATCCCGAGTAC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCCTGGCCCCTTGGCTaGCGAACTGGGCATTCACCA +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPWPLG*RTGHSP
Trigger: TGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGCCCGCCCTGGCCCCTaGGCTTGCGAACTGGGCATT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPARPGP*ACELGI
Trigger: AATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTGCCGTACCTATCAGTaGGGGGCAGCTCATGAGGCT +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKCRTYQ*GAAHEA
Trigger: AGCCTCATGAGCTGCCCCCAACTGATAGGTACGGCA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGCGATGCTGAAGGCTTaGGGACCCCATCAACGTCTG +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKAMLKA*GPHQRL
Trigger: CAGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTGGTTGGGGGAGCCCTaGGGCAGTTATAAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEWLGEP*GSYKVE
Trigger: TTCCACTTTATAACTGCCCAAGGGCTCCCCCAACCA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLCPNWY*KVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGAAAAACATGGGGAGTaGGAGGGACGGATCTATAGC +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKEKHGE*EGRIYS
Trigger: GCTATAGATCCGTCCCTCCAACTCCCCATGTTTTTC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACCCCAAGCCAGAGAATaGCCAAGGCTGGGATTTAAA +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLPQARE*PRLGFK
Trigger: TTTAAATCCCAGCCTTGGCAATTCTCTGGCTTGGGG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGGTCTTCCCTCTACCTTaGCTCCGGGTTGGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLVFPLP*LRVGRK
Trigger: TTTTCTTCCAACCCGGAGCAAAGGTAGAGGGAAGAC...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAGCTGAGGTGGATCACTaGAGCCCAGGTGGTCAAGGC +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAAEVDH*SPGGQG
Trigger: GCCTTGACCACCTGGGCTCAAGTGATCCACCTCAGC...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp CTGGGCATTCACCACAGCATCCTCATTCACAGATGGCTGAGAAAATaGAAACATTTGCTCCATCGGTGGGTATCCTCTGTAAGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: LGIHHSILIHRWLRK*KHLLHRWVSSVSSR
Trigger: CCTAGAGCTTACAGAGGATACCCACCGATGGAGCAAATGTTTTCATTTTCTCAGCCATCTGTGAATGAGGATGCTGTGGTGAATGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGGACTTCTCTGGTATaGCGGGGGATTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYRTSLV*RGIPSP
Trigger: AGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGGGAAGAGTGGTGGATaGTGCTGCAACTGGCAATGG +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKGKSGG*CCNWQW
Trigger: CCATTGCCAGTTGCAGCACAATCCACCACTCTTCCC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAGGACGCTGTGGTATATaGCCTGGGGGAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIGRCGI*PGGTAS
Trigger: GGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCC...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGGAGCTCTGGTTACTaGGCCTTAAGATGTCACTGT +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKRSSGY*ALRCHC
Trigger: ACAGTGACATCTTAAGGCCAAGTAACCAGAGCTCCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAGTTGTCCCAGTGCCTGAACCAGATGCCTTTTCCACATTCAAGCCAAATAAGTGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RVVPVPEPDAFSTFKPNKCPNWY*KVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA...CTTATTTGGCTTGAATGTGGAAAAGGCATCTGGTTCAGGCACTGGGACAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQECPNWY*KVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTGGTAGATCATACCTaGGACAAACGAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELVDHT*DKRAPP
Trigger: TGGAGGAGCTCGTTTGTCCAAGGTATGATCTACCAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAATGGGTCATTCTAACATaGGACAGCATGGATTCCCAC +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKWVILT*DSMDSH
Trigger: GTGGGAATCCATGCTGTCCAATGTTAGAATGACCCA...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS GCA 90 bp TGGGAAAGATGGTGCAATCCTGTTACCCCACAAAGAATTATGTACTaGATCTTTAGCTGTTGTCTGCAAGGACCCCACTTTAACCCGGGT +
Preference number: 5 (lower is better)
Translates to: WERWCNPVTPQRIMY*IFSCCLQGPHFNPG
Trigger: ACCCGGGTTAAAGTGGGGTCCTTGCAGACAACAGCTAAAGATGCAGTACATAATTCTTTGTGGGGTAACAGGATTGCACCATCTTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS GCA 90 bp GGAACACCAACAATCCTGTCTTGCCTGATCAAAGGCCTGCGTCCATaGGAAGATGTGCTTCTAGATTTCGAACTTAAGAGAGGATTACTG +
Preference number: 5 (lower is better)
Translates to: GTPTILSCLIKGLRP*EDVLLDFELKRGLL
Trigger: CAGTAATCCTCTCTTAAGTTCGAAATCTAGAAGCACATCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp TTAGGTTTATTTCAACCTGTCTGCCACTTAGAGAGGGAAGAGTGGTaGATTGTGCTGCAACTGGCAATGGAGTACACATGCTCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LGLFQPVCHLEREEW*IVLQLAMEYTCSFP
Trigger: AGGAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTCTAAGTGGCAGACAGGTTGAAATAAACCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGGGCCAGTTTGTGCATaGACTTTGGTAGAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKGPVCA*TLVEFS
Trigger: TGAAAACTCTACCAAAGTCAATGCACAAACTGGCCC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCTTTCCCAGGGGGCTaGGCAGGAGAGATCCTTAAC +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPFPGG*AGEILN
Trigger: GTTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGCGATGCTGAAGGCTTaGGGACCCCATCAACGTCTG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTAMLKA*GPHQRL
Trigger: CAGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGGAATTCATAAAGAGCTaGTGTGTGCTTCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEEFIKS*CVLPCS
Trigger: GGAGCACGGAAGCACACACAAGCTCTTTATGAATTC...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCTGGATCTTCAGATGTTaGGTAGAGTTTTCAAGTGAT +
Preference number: 5 (lower is better)
Translates to: HILCCRCHCIVSGDWARGWIFRC*VEFSSD
Trigger: ATCACTTGAAAACTCTACCAAACATCTGAAGATCCA...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCATTTCATATTTTGACTaGTGCCATCTGGGAACTTTG +
Preference number: 5 (lower is better)
Translates to: HILCCRCHCIVSGDWARGISYFD*CHLGTL
Trigger: CAAAGTTCCCAGATGGCACAAGTCAAAATATGAAAT...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp CACATCCTCTGTTGTAGGTGTCACTGTATAGTCTCAGGCGATTGGGCAAGGGGCAAATGCTATAAGCCATaGAACTGCATGAAAAGCCAA +
Preference number: 5 (lower is better)
Translates to: HILCCRCHCIVSGDWARGKCYKP*NCMKSQ
Trigger: TTGGCTTTTCATGCAGTTCAATGGCTTATAGCATTT...GCCCCTTGCCCAATCGCCTGAGACTATACAGTGACACCTACAACAGAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGGTGACTCCAATTTTTaGCTCCTCTGTGCCTGTTTA +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLGDSNF*LLCACL
Trigger: TAAACAGGCACAGAGGAGCAAAAAATTGGAGTCACC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAGGCAGGAAAATCGTTaGAACCCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKRQENR*NPGGGG
Trigger: ACCTCCACCTCCTGGGTTCAAACGATTTTCCTGCCT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp GTTTTAGGTTTATTTCAACCTGTCTGCCACTTAGAGAGGGAAGAGTaGTGGATTGTGCTGCAACTGGCAATGGAGTACACATGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VLGLFQPVCHLEREE*WIVLQLAMEYTCSF
Trigger: AAAGGAGCATGTGTACTCCATTGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTCTAAGTGGCAGACAGGTTGAAATAAACCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAACAGTCATGCGTTGTaGTCTCTGCTCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYNSHAL*SLLFPQ
Trigger: CTGTGGGAAGAGCAGAGACAACAACGCATGACTGTT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAACAGTCATGCGTTGTaGTCTCTGCTCTTCCCACAG +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKNSHAL*SLLFPQ
Trigger: CTGTGGGAAGAGCAGAGACAACAACGCATGACTGTT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGGCAACAGTCATGCGTaGTTGTCTCTGCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYGNSHA*LSLLFP
Trigger: TGGGAAGAGCAGAGACAACAACGCATGACTGTTGCC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCCTTTCCCAGGGGGCTaGGCAGGAGAGATCCTTAAC +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKPFPGG*AGEILN
Trigger: GTTAAGGATCTCTCCTGCCAAGCCCCCTGGGAAAGG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGGGGACGGGCATATCTaGGATCTGCTGATCACACCT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTGDGHI*DLLITP
Trigger: AGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCACGCACTCCATGGCTaGGCTTACCCACCAAATTTT +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYHALHG*AYPPNF
Trigger: AAAATTTGGTGGGTAAGCCAAGCCATGGAGTGCGTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGCATAGAAGCTTTTTGTaGTTGTGGCCCCTTACTACT +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLHRSFL*LWPLTT
Trigger: AGTAGTAAGGGGCCACAACAACAAAAAGCTTCTATG...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGCCGTACCTATCAGTaGGGGGCAGCTCATGAGGCT +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLCRTYQ*GAAHEA
Trigger: AGCCTCATGAGCTGCCCCCAACTGATAGGTACGGCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCCATTGTCTAAAATGTaGCTTTGCTGGGACGGGGTC +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYPLSKM*LCWDGV
Trigger: GACCCCGTCCCAGCAAAGCAACATTTTAGACAATGG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACAAAACTGTGTCCATTaGCCTGAAGGATCTTATCAC +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLQNCVH*PEGSYH
Trigger: GTGATAAGATCCTTCAGGCAAATGGACACAGTTTTG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGAAGCAGCTTTCAAGGTaGTTATGGTCTCATACTGCA +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLKQLSR*LWSHTA
Trigger: TGCAGTATGAGACCATAACAACCTTGAAAGCTGCTT...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGAAAGTTCCTCCCAAATaGGGAGCTGTAACCATCTGT +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEKVPPK*GAVTIC
Trigger: ACAGATGGTTACAGCTCCCAATTTGGGAGGAACTTT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAGCCCTAGTCTGTTCTaGTTCCTTACTCACTCATTA +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKSPSLF*FLTHSL
Trigger: TAATGAGTGAGTAAGGAACAAGAACAGACTAGGGCT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATATGTAATCCCCGTACTTaGGGAGTCCGAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKICNPRT*GVRGRW
Trigger: CCACCTGCCTCGGACTCCCAAAGTACGGGGATTACA...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATCTTCTTCCCTCAGATaGATCCCTTTAAGTGGAACA +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLSSSLR*IPLSGT
Trigger: TGTTCCACTTAAAGGGATCAATCTGAGGGAAGAAGA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS GCA 90 bp TTTGGGGCTACCGGCCACTTGTGTTCATATTTTTCTTTCACAGTTTaGTCCGTGTTAGCAGTTGGATTTGAATTCTCAACACGCACTCCA +
Preference number: 5 (lower is better)
Translates to: FGATGHLCSYFSFTV*SVLAVGFEFSTRTP
Trigger: TGGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAATATGAACACAAGTGGCCGGTAGCCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp GTCCTAGGGGGCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: VLGGFQPGSPVICPN*YLKVRSPLIKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGCCCCCTAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608470.5
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAGGACTTCTCTGGTATaGCGGGGGATTCCTTCCCCT +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLRTSLV*RGIPSP
Trigger: AGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGGGACGGGCATATCTaGGATCTGCTGATCACACCT +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGDGHI*DLLITP
Trigger: AGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATGGGGCTACCGGCCACTaGTGTTCATATTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYGATGH*CSYFSF
Trigger: GAAAGAAAAATATGAACACAAGTGGCCGGTAGCCCC...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTCAGTTGATTCTTTTTaGTCCTTCCCTAGCAGAACA +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLSVDSF*SFPSRT
Trigger: TGTTCTGCTAGGGAAGGACAAAAAAGAATCAACTGA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAACCAACAATCCTGTCTaGCCTGATCAAAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTTNNPV*PDQRPA
Trigger: CGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCTCATCATCCAGCATaGGGACTGACTGGCTTCGAG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSHHPA*GLTGFE
Trigger: CTCGAAGCCAGTCAGTCCCAATGCTGGATGATGAGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATCCTTGGCGATGTTTTaGCTGGCCTGTTGCACGTAC +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTSLAMF*LACCTY
Trigger: GTACGTGCAACAGGCCAGCAAAAACATCGCCAAGGA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACTGATGAGGTTAAGCTaGCAGCCCAATGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLLMRLS*QPNVKI
Trigger: AATTTTAACATTGGGCTGCAAGCTTAACCTCATCAG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGTAAAGGCCTCTGTCTaGATTAATGATGATCATCCT +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKVKASV*INDDHP
Trigger: AGGATGATCATCATTAATCAAGACAGAGGCCTTTAC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAATTTCAGATGTTTCATaGCCACCAAACTACAGCCAT +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLISDVS*PPNYSH
Trigger: ATGGCTGTAGTTTGGTGGCAATGAAACATCTGAAAT...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGAGACATCCACTGCCTTaGGAAAAACATGGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKRHPLP*EKHGEL
Trigger: CAACTCCCCATGTTTTTCCAAAGGCAGTGGATGTCT...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTAGCACACAGGCTTTGTTaGTTGTTGTCAGTAACATTA +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLAHRLC*LLSVTL
Trigger: TAATGTTACTGACAACAACAAACAAAGCCTGTGTGC...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATAGTTTTATAAAGGCATaGCCACCCCCACCATTGCAC +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYSFIKA*PPPPLH
Trigger: GTGCAATGGTGGGGGTGGCAATGCCTTTATAAAACT...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATGGAGAGCAGAATTCATAAAGAGCTTGTGTGTGCTTCCGTGCTCCGAAATTATCAGTGCTGGACCAAGTaGAGGAACACCTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: MESRIHKELVCASVLRNYQCWTK*RNTFLH
Trigger: ATGAAGAAAGGTGTTCCTCAACTTGGTCCAGCACTG...ATAATTTCGGAGCACGGAAGCACACACAAGCTCTTTATGAATTCTGCTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTACATTTATTAGACTTTTaGTGTGTCTCCCCACTAGAC +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLHLLDF*CVSPLD
Trigger: GTCTAGTGGGGAGACACACAAAAAGTCTAATAAATG...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATGGAACAGTAAGCCTTaGTTATCAAGCCTTAAGATG +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLWNSKP*LSSLKM
Trigger: CATCTTAAGGCTTGATAACAAAGGCTTACTGTTCCA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCGATGATTTTCCGTTaGGTGGTCATCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPMIFR*VVISRH
Trigger: GTGCCTGGAGATGACCACCAAACGGAAAATCATCGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCCTCAAATTTTGTATTaGATCCAGAACTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQEPQILY*IQNFRQ
Trigger: CTGCCTGAAGTTCTGGATCAAATACAAAATTTGAGG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAAATTGTTGCAACATATaGGATGACAATAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKNCCNI*DDNKRS
Trigger: GGACCTCTTATTGTCATCCAATATGTTGCAACAATT...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGCAACAGTCATGCGTaGTTGTCTCTGCTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGNSHA*LSLLFP
Trigger: TGGGAAGAGCAGAGACAACAACGCATGACTGTTGCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGACAGTCTGGCAGGTaGGAGAGTAATCCCACGCTG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRQSGR*ESNPTL
Trigger: CAGCGTGGGATTACTCTCCAACCTGCCAGACTGTCT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAGACAGTCTGGCAGGTaGGAGAGTAATCCCACGCTG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLRQSGR*ESNPTL
Trigger: CAGCGTGGGATTACTCTCCAACCTGCCAGACTGTCT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGGAAGAGTGGTGGATaGTGCTGCAACTGGCAATGG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGKSGG*CCNWQW
Trigger: CCATTGCCAGTTGCAGCACAATCCACCACTCTTCCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGGGGCTACCGGCCACTaGTGTTCATATTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYGATGH*CSYFSF
Trigger: GAAAGAAAAATATGAACACAAGTGGCCGGTAGCCCC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAACCAACAATCCTGTCTaGCCTGATCAAAGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITTNNPV*PDQRPA
Trigger: CGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGTACTCGGGATTGTGTaGAAAAGGGGGTGGTATCCT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTVLGIV*KRGWYP
Trigger: AGGATACCACCCCCTTTTCAACACAATCCCGAGTAC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGGTTTTTGCTGGCCTGTaGCACGTACTCGGGATTGTG +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWEVFAGL*HVLGIV
Trigger: CACAATCCCGAGTACGTGCAACAGGCCAGCAAAAAC...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATCCTTGGCGATGTTTTaGCTGGCCTGTTGCACGTAC +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITSLAMF*LACCTY
Trigger: GTACGTGCAACAGGCCAGCAAAAACATCGCCAAGGA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTCTCTCATCTTTCCTCTGGACTGTGAGATTCTGTGCTGAGGGGACCACATTATGCTGGATGGTCACTTaGTTTATATTTCCTTCATAC +
Preference number: 5 (lower is better)
Translates to: LLSSFLWTVRFCAEGTTLCWMVT*FIFPSY
Trigger: GTATGAAGGAAATATAAACAAAGTGACCATCCAGCA...TAATGTGGTCCCCTCAGCACAGAATCTCACAGTCCAGAGGAAAGATGAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATCCTGAGAGTTTCATCTaGCTTTTCCTATGGACCGTC +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYPESFI*LFLWTV
Trigger: GACGGTCCATAGGAAAAGCAAGATGAAACTCTCAGG...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACTTATATATAGCTGGTaGGGGGAGCCCTTGGGCAGT +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLLIYSW*GEPLGS
Trigger: ACTGCCCAAGGGCTCCCCCAACCAGCTATATATAAG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGTTCACATTTTCTAAGTaGATGCGCAATGACACTAAG +
Preference number: 5 (lower is better)
Translates to: PGSPVICPNWYLKVRSPLFTFSK*MRNDTK
Trigger: CTTAGTGTCATTGCGCATCAACTTAGAAAATGTGAA...CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTCPNWY*KVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AAACCAAGAAGAGCTGAACGATTACTCCTCTCTCCTGAGGCTCTTCTGTCTAGATGGGAAAGATACACATaGCCTTGTACTGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: KPRRAERLLLSPEALLSRWERYT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCA...TCTAGACAGAAGAGCCTCAGGAGAGAGGAGTAATCGTTCAGCTCTTCTTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608815.5
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATCCCAGGTCAAGCGATaGATTCTCATGCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLSQVKR*ILMPQP
Trigger: AGGCTGAGGCATGAGAATCAATCGCTTGACCTGGGA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATGGACAAAATGACTTACCAGTAGCTGGTCCTAGGGGGCTGAGGTGTGGAAAAGGTTATGTTGTATTCTaGCCTCTTGATGAGAATGTA +
Preference number: 5 (lower is better)
Translates to: NGQNDLPVAGPRGLRCGKGYVVF*PLDENV
Trigger: TACATTCTCATCAAGAGGCAAGAATACAACATAACC...TTTTCCACACCTCAGCCCCCTAGGACCAGCTACTGGTAAGTCATTTTGTCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATATAGCGCACATCTATTaGTCCACAGCCCACATTCTG +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYIAHIY*STAHIL
Trigger: CAGAATGTGGGCTGTGGACAAATAGATGTGCGCTAT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACTCACCTGTGGAAATTaGACCCAGACCTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKALTCGN*TQTLSL
Trigger: CAAAGACAAGGTCTGGGTCAAATTTCCACAGGTGAG...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAGGCAGGTGGATCTTTaGAGGCCAGGTGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFRQVDL*RPGVRD
Trigger: GTCTCGAACACCTGGCCTCAAAAGATCCACCTGCCT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGCATAGGAGGGACTTTTaGGGGCCGCTGAACCTAGAA +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWEHRRDF*GPLNLE
Trigger: TTCTAGGTTCAGCGGCCCCAAAAAGTCCCTCCTATG...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATAACTAGACTGTGTTTCTaGAGGGGTAGGACCATGGCT +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEITRLCF*RGRTMA
Trigger: AGCCATGGTCCTACCCCTCAAGAAACACAGTCTAGT...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp GACATTACTAAGACTCCTGTTGGGATTGGAATCATGATACTCCCATaGTACGCCTGGAGAAAAAGGACTAGGTATTTCAGTAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: DITKTPVGIGIMILP*YAWRKRTRYFSRFL
Trigger: AAGGAATCTACTGAAATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAGTATCATGATTCCAATCCCAACAGGAGTCTTAGTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp CCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTaGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTGCCTGGGAACATG +
Preference number: 5 (lower is better)
Translates to: PDFPSCFIWTYLYDF*VFLWKRVVPVPGNM
Trigger: CATGTTCCCAGGCACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441830.1
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTCACCGAATTCATTATaGCCTAGGTCAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKSPNSL*PRSSLS
Trigger: GGAAAGACTTGACCTAGGCAATAATGAATTCGGTGA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAAGAGAGGATTACTGTaGGCATTCTCGGCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTKRGLL*AFSAVV
Trigger: AACCACAGCCGAGAATGCCAACAGTAATCCTCTCTT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACAATTCTGCCAAGGATaGGAAGGAGGCACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTQFCQG*EGGTSV
Trigger: AACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGGGGTTGTCTCTAATTaGGAAGGAAAAGCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLGVVSN*EGKAVL
Trigger: CAGGACCGCTTTTCCTTCCAAATTAGAGACAACCCC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGGGGTTGTCTCTAATTaGGAAGGAAAAGCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKGVVSN*EGKAVL
Trigger: CAGGACCGCTTTTCCTTCCAAATTAGAGACAACCCC...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGTTTTTGCTGGCCTGTaGCACGTACTCGGGATTGTG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPVFAGL*HVLGIV
Trigger: CACAATCCCGAGTACGTGCAACAGGCCAGCAAAAAC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGACACTAAGTTTCACATaGCCTTGTACTGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQETLSFT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGT...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
CDS-3UTR CAA 90 bp CTTTCTCTGCCAACAGACTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: LSLPTDFQPGSPVICPNWKVRSP*IKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTT...CCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGTCTGTTGGCAGAGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATGGAGACTTGTGGGCTaGGTTTTTGCAGTAGGAAGC +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITWRLVG*VFAVGS
Trigger: GCTTCCTACTGCAAAAACCAAGCCCACAAGTCTCCA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATGGCTCAGGACAATGTaGTCACATCAGGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLWLRTM*SHQEWQ
Trigger: CTGCCACTCCTGATGTGACAACATTGTCCTGAGCCA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGGCTATAATGTATTCTTaGGGTATGGTGTTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKAIMYS*GMVLVG
Trigger: ACCCACCAACACCATACCCAAAGAATACATTATAGC...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCATTGCACACAGGCTTaGTTTGTTGTTGTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKHCTQA*FVVVSN
Trigger: GTTACTGACAACAACAAACAAAGCCTGTGTGCAATG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCAACAACCTTCCACCTTTaGAGGTGCTGCCATAACAAA +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKATTFHL*RCCHNK
Trigger: TTTGTTATGGCAGCACCTCAAAAGGTGGAAGGTTGT...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTTGTTCAAAGAGACATaGGCATTCTTTTACCCATGT +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELFKET*AFFYPC
Trigger: ACATGGGTAAAAGAATGCCAATGTCTCTTTGAACAA...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAATGGTGCACTAAAATaGGCAGGCTTGAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYNGALK*AGLRSE
Trigger: TTCTGACCTCAAGCCTGCCAATTTTAGTGCACCATT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGCTTTTTATATTATACTaGCCTGAGGATCACCAGAAG +
Preference number: 5 (lower is better)
Translates to: LSTWISSNMPKLVLEGQELFILY*PEDHQK
Trigger: CTTCTGGTGATCCTCAGGCAAGTATAATATAAAAAG...CTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACTGAATGAAGCTCCCTaGCTCATTTGCAGCCACCAG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLLNEAP*LICSHQ
Trigger: CTGGTGGCTGCAAATGAGCAAGGGAGCTTCATTCAG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGTCTGCATGAAGCTATaGTCTCATTTGCAGGCTCCC +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITVCMKL*SHLQAP
Trigger: GGGAGCCTGCAAATGAGACAATAGCTTCATGCAGAC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp TTCATATTTTTCTTTCACAGTTTGCTCCGTGTTAGCAGTTGGATTTaGATTCTCAACACGCACTCCATGGCTTGGCTTACCCACCAAATT +
Preference number: 5 (lower is better)
Translates to: FIFFFHSLLRVSSWI*ILNTHSMAWLTHQI
Trigger: AATTTGGTGGGTAAGCCAAGCCATGGAGTGCGTGTTGAGAATTCAAATCCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAATATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 90 bp AAGACTCCTGTTGGGATTGGAATCATGATACTCCCATGGTACGCCTaGAGAAAAAGGACTAGGTATTTCAGTAGATTCCTTTATATGTTC +
Preference number: 5 (lower is better)
Translates to: KTPVGIGIMILPWYA*RKRTRYFSRFLYMF
Trigger: GAACATATAAAGGAATCTACTGAAATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAGTATCATGATTCCAATCCCAACAGGAGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTCTCCAGGCACTGCATaGCTAGTTATTCCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLSPGTA*LVIPVS
Trigger: AGAGACAGGAATAACTAGCAATGCAGTGCCTGGAGA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATCAATACTCTTTGCTTaGTTTCTGGATGGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKASILFA*FLDGLL
Trigger: CAGAAGCCCATCCAGAAACAAAGCAAAGAGTATTGA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGCACGCACTCCATGGCTaGGCTTACCCACCAAATTTT +
Preference number: 5 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQHALHG*AYPPNF
Trigger: AAAATTTGGTGGGTAAGCCAAGCCATGGAGTGCGTG...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTGAGCCATCAGTCCAGTaGTCAGTGAAAGTATCACTC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLEPSVQ*SVKVSL
Trigger: GAGTGATACTTTCACTGACAACTGGACTGATGGCTC...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGAGCCATCAGTCCAGTaGTCAGTGAAAGTATCACTC +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITEPSVQ*SVKVSL
Trigger: GAGTGATACTTTCACTGACAACTGGACTGATGGCTC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACCCTTGTCAGAAGGTTaGAATGGATTTCCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTPLSEG*NGFPCP
Trigger: TGGACAAGGAAATCCATTCAAACCTTCTGACAAGGG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTG +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFCPNWY*KVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp ACATTCAAGCCAAATAAGAGTCCTCTGAGTGGAAAGACTTTCAACCTGGATCTCTGGGAAAGATACACATaGCCTTGTACTGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: TFKPNKSPLSGKTFNLDLWERYT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGTATCTTTCCCA...GAGATCCAGGTTGAAAGTCTTTCCACTCAGAGGACTCTTATTTGGCTTGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608815.5
ENST00000609498.5
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATCTATCACTTGCTGTTaGATAGTACATGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEISITCC*IVHAGP
Trigger: GGGTCCTGCATGTACTATCAAACAGCAAGTGATAGA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAACATGGCAGTACTATaGACAGTGAGGTGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKNMAVL*TVRCFG
Trigger: GCCAAAGCACCTCACTGTCAATAGTACTGCCATGTT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATCAAATTAACATTGGCTaGTCAGTCTCTCCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYQINIG*SVSPQS
Trigger: GCTTTGAGGAGAGACTGACAAGCCAATGTTAATTTG...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAAGTGTGCCAATAAACTaGCTGTTTGGTCGGCATATC +
Preference number: 5 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPSVPIN*LFGRHI
Trigger: GATATGCCGACCAAACAGCAAGTTTATTGGCACACT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATGAAAGGAAAGGGGTGTaGTTAGCAATTGTATCAGCA +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYERKGV*LAIVSA
Trigger: TGCTGATACAATTGCTAACAACACCCCTTTCCTTTC...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACAGGGGCTGTTCAAGTaGCATTTCTTACTGAACTCT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTQGLFK*HFLLNS
Trigger: AGAGTTCAGTAAGAAATGCAACTTGAACAGCCCCTG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACTAGGGCAGCTGAAATaGTCAACATTGGAGAACTCT +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEILGQLK*STLENS
Trigger: AGAGTTCTCCAATGTTGACAATTTCAGCTGCCCTAG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATGGGCTACACCTCAGTaGCGAACTGAGGAAAGTTGT +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLWATPQ*RTEESC
Trigger: ACAACTTTCCTCAGTTCGCAACTGAGGTGTAGCCCA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 90 bp CCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATTTTTaGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTGCGCAAATATAGC +
Preference number: 5 (lower is better)
Translates to: PDFPSCFIWTYLYDF*VFLWKRVVPVRKYS
Trigger: GCTATATTTGCGCACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607936.5
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCCAACTGGGCCAGTTaGTGCATTGACTTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSNWAS*CIDFGR
Trigger: TCTACCAAAGTCAATGCACAAACTGGCCCAGTTGGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTCCAACTGGGCCAGTTaGTGCATTGACTTTGGTAGA +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSNWAS*CIDFGR
Trigger: TCTACCAAAGTCAATGCACAAACTGGCCCAGTTGGA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGTTAGTCAATACTCTTaGCTTTGTTTCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTVSQYS*LCFWMG
Trigger: GCCCATCCAGAAACAAAGCAAAGAGTATTGACTAAC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACCTCTGGGTAAGGAGTaGGATATCGTTTTAGGTTTA +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIPLGKE*DIVLGL
Trigger: TAAACCTAAAACGATATCCAACTCCTTACCCAGAGG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAAGAGAGGATTACTGTaGGCATTCTCGGCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFKRGLL*AFSAVV
Trigger: AACCACAGCCGAGAATGCCAACAGTAATCCTCTCTT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACAATTCTGCCAAGGATaGGAAGGAGGCACTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPQFCQG*EGGTSV
Trigger: AACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACGGGCGGCAGTGGATTaGAGAAAAGACATTACTAAG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRAAVD*RKDITK
Trigger: CTTAGTAATGTCTTTTCTCAAATCCACTGCCGCCCG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCGGGCGGCAGTGGATTaGAGAAAAGACATTACTAAG +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFRAAVD*RKDITK
Trigger: CTTAGTAATGTCTTTTCTCAAATCCACTGCCGCCCG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAGAAGCTTTTTGTTGTaGTGGCCCCTTACTACTTCC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLRSFLL*WPLTTS
Trigger: GGAAGTAGTAAGGGGCCACAACAACAAAAAGCTTCT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAGAAGCTTTTTGTTGTaGTGGCCCCTTACTACTTCC +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLRSFLL*WPLTTS
Trigger: GGAAGTAGTAAGGGGCCACAACAACAAAAAGCTTCT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTTGAGGATTGAAGCTTaGGTCAAACTGATAGACTTT +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKLRIEA*VKLIDF
Trigger: AAAGTCTATCAGTTTGACCAAAGCTTCAATCCTCAA...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGACTAATCAAATCCTaGGCGATGTTTTTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGLIKS*AMFLLA
Trigger: GGCCAGCAAAAACATCGCCAAGGATTTGATTAGTCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGGACTAATCAAATCCTaGGCGATGTTTTTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLGLIKS*AMFLLA
Trigger: GGCCAGCAAAAACATCGCCAAGGATTTGATTAGTCC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGGATAAGGATTCCATaGGCCACTAGGAGATACATC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLWIRIP*ATRRYI
Trigger: GATGTATCTCCTAGTGGCCAATGGAATCCTTATCCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGCCCTTGTCAGAAGGTTaGAATGGATTTCCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKPLSEG*NGFPCP
Trigger: TGGACAAGGAAATCCATTCAAACCTTCTGACAAGGG...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACACAAAACTGTGTCCATTaGCCTGAAGGATCTTATCAC +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTQNCVH*PEGSYH
Trigger: GTGATAAGATCCTTCAGGCAAATGGACACAGTTTTG...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp GCAGAATTAGTCCCTGATTTCCCATCATGCTTCATTTGGACTTATTTGTACGATCAAAACTGTGTCCATTaGCCTGAAGGATCTTATCAC +
Preference number: 5 (lower is better)
Translates to: AELVPDFPSCFIWTYLYDQNCVH*PEGSYH
Trigger: GTGATAAGATCCTTCAGGCAAATGGACACAGTTTTG...ATCGTACAAATAAGTCCAAATGAAGCATGATGGGAAATCAGGGACTAATTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACCATTGGTCCAGCAATaGGCAAAATTTGTTTCTATG +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAPLVQQ*AKFVSM
Trigger: CATAGAAACAAATTTTGCCAATTGCTGGACCAATGG...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGAATTCATAAAGAGCTaGTGTGTGCTTCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPEFIKS*CVLPCS
Trigger: GGAGCACGGAAGCACACACAAGCTCTTTATGAATTC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTGACTTGTGCCATCTGGGAACTTTGCAAAATAAGTCCACAATGGAACATCATTGCCATCTGGGAACTTaGCAAAATAAGTCCACAATG +
Preference number: 5 (lower is better)
Translates to: FDLCHLGTLQNKSTMEHHCHLGT*QNKSTM
Trigger: CATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCA...ATGATGTTCCATTGTGGACTTATTTTGCAAAGTTCCCAGATGGCACAAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATTCTGCCTGCATGCATaGCTGAAATACCTCCATAGG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLFCLHA*LKYLHR
Trigger: CCTATGGAGGTATTTCAGCAATGCATGCAGGCAGAA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTACCATTGTCTAAAATGTaGCTTTGCTGGGACGGGGTT +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLPLSKM*LCWDGV
Trigger: AACCCCGTCCCAGCAAAGCAACATTTTAGACAATGG...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATACCTATGACTTCAGCTTaGGCCTATTTTGAAATGCAG +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIPMTSA*AYFEMQ
Trigger: CTGCATTTCAAAATAGGCCAAAGCTGAAGTCATAGG...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTCCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGCAGAAGGTGGTTGTATaGCTAAGGAAAAATGTTCAT +
Preference number: 5 (lower is better)
Translates to: SPVICPNWYLKVRSPLIKQKVVV*LRKNVH
Trigger: ATGAACATTTTTCCTTAGCAATACAACCACCTTCTG...CTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATCTTTGGGTATGGTGTaGGTGGGTGATGGGAAATAT +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITSLGMV*VGDGKY
Trigger: ATATTTCCCATCACCCACCAACACCATACCCAAAGA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATGCATCTACCTTAGTTaGTACAAGTGGTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTCIYLS*YKWCIL
Trigger: CAAGATGCACCACTTGTACAAACTAAGGTAGATGCA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAGCTGTAACCATCTGTaGATACTCAAGGCTCTCCGA +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLSCNHL*ILKALR
Trigger: TCGGAGAGCCTTGAGTATCAACAGATGGTTACAGCT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCTCTTGCAGGCAGTGTaGAAAGTAAGGAAGATTGGA +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLLQAV*KVRKIG
Trigger: TCCAATCTTCCTTACTTTCAACACTGCCTGCAAGAG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATTCCAAACCATTCTCTaGCAGGCAGTGTTGAAAGTA +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTFQTIL*QAVLKV
Trigger: TACTTTCAACACTGCCTGCAAGAGAATGGTTTGGAA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAATTTGACCCAGACCTaGTCTTTGGGTAGGACTACA +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITNLTQT*SLGRTT
Trigger: TGTAGTCCTACCCAAAGACAAGGTCTGGGTCAAATT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGCAAGGCATTCACACTaGCCACGTTTAGCCTATCAA +
Preference number: 5 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQARHSH*PRLAYQ
Trigger: TTGATAGGCTAAACGTGGCAAGTGTGAATGCCTTGC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATGCTTTCTTTCTACTTaGAGATCAACAGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKACFLST*RSTGQI
Trigger: AATCTGGCCTGTTGATCTCAAAGTAGAAAGAAAGCA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAGCTGGATTCCATTTTTaGTCCCTTCAGGGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLAGFHF*SLQGKD
Trigger: ATCCTTCCCCTGAAGGGACAAAAAATGGAATCCAGC...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATCTATTCCCACATACTaGGAATGGGCATACCTGAAG +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLSIPTY*EWAYLK
Trigger: CTTCAGGTATGCCCATTCCAAGTATGTGGGAATAGA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAAAGAACCAAAATAGCTaGAGGACACATGTCACCAAG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTKNQNS*RTHVTK
Trigger: CTTGGTGACATGTGTCCTCAAGCTATTTTGGTTCTT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCACTAAAATTGGCAGGCTaGAGGTCAGAAAGAACTTAC +
Preference number: 5 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPLKLAG*RSERTY
Trigger: GTAAGTTCTTTCTGACCTCAAGCCTGCCAATTTTAG...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATGGATAGGAGGGCCTTaGAATACTTGTATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAWIGGP*NTCISK
Trigger: TTTACTGATACAAGTATTCAAAGGCCCTCCTATCCA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTAGCTCCCTTGCTCATTaGCAGCCACCAGTTAACAAT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSSLAH*QPPVNN
Trigger: ATTGTTAACTGGTGGCTGCAAATGAGCAAGGGAGCT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGGCCAGTTTGTGCATaGACTTTGGTAGAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGPVCA*TLVEFS
Trigger: TGAAAACTCTACCAAAGTCAATGCACAAACTGGCCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGTTAGTCAATACTCTTaGCTTTGTTTCTGGATGGGC +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIVSQYS*LCFWMG
Trigger: GCCCATCCAGAAACAAAGCAAAGAGTATTGACTAAC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTTTTCTTTCACAGTTaGCTCCGTGTTAGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLFFFHS*LRVSSW
Trigger: CCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATTTTTCTTTCACAGTTaGCTCCGTGTTAGCAGTTGG +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLFFFHS*LRVSSW
Trigger: CCAACTGCTAACACGGAGCAAACTGTGAAAGAAAAA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTGTCATAGAAGCTTTTaGTTGTTGTGGCCCCTTACT +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKCHRSF*LLWPLT
Trigger: AGTAAGGGGCCACAACAACAAAAAGCTTCTATGACA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATGGATAAGGATTCCATaGGCCACTAGGAGATACATC +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLWIRIP*ATRRYI
Trigger: GATGTATCTCCTAGTGGCCAATGGAATCCTTATCCA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACATTTGAATGGATTTCCTaGTCCACTAATTCCACCACT +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTFEWIS*STNSTT
Trigger: AGTGGTGGAATTAGTGGACAAGGAAATCCATTCAAA...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAGTAACAAAGATACCCTaGTCAGAAGGTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTVTKIP*SEGLNG
Trigger: TCCATTCAAACCTTCTGACAAGGGTATCTTTGTTAC...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp AATTATGCATTTATGTCAGTTAAGTCACTGACACTTAGGGAGAAGGGAAAGCCAACAAACAGTTCCTGCTaGTTTCTAGATATTGAGGAC +
Preference number: 5 (lower is better)
Translates to: NYAFMSVKSLTLREKGKPTNSSC*FLDIED
Trigger: GTCCTCAATATCTAGAAACAAGCAGGAACTGTTTGT...TGGCTTTCCCTTCTCCCTAAGTGTCAGTGACTTAACTGACATAAATGCATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACTTAAGATGTCACTGTaGTGCTGCACATATGGTAGT +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITLKMSL*CCTYGS
Trigger: ACTACCATATGTGCAGCACAACAGTGACATCTTAAG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCATTCACATTTTCTAAGTaGATGCGCAATGACACTAAG +
Preference number: 5 (lower is better)
Translates to: CPNWYLKVRSPLIKYLKAFTFSK*MRNDTK
Trigger: CTTAGTGTCATTGCGCATCAACTTAGAAAATGTGAA...TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYKVRSP*IKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTACAGAAGGATTTTGTCTaGTGCAGAAGGCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLQKDFV*CRRLKA
Trigger: TGCTTTTAGCCTTCTGCACAAGACAAAATCCTTCTG...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608744.5
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCAGAAGGATTTTGTCTaGTGCAGAAGGCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLQKDFV*CRRLKA
Trigger: TGCTTTTAGCCTTCTGCACAAGACAAAATCCTTCTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTATTTAGGATTGGAGACTaGTGGGCTTGGTTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLFRIGD*WAWFLQ
Trigger: CTGCAAAAACCAAGCCCACAAGTCTCCAATCCTAAA...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATACAGCTTTGGCCTATTTaGAAATGCAGTTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIQLWPI*KCSCSK
Trigger: CTTAGAGCAACTGCATTTCAAAATAGGCCAAAGCTG...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCGGAAGTGCCACACATaGATTTGGGGGTATAAACTT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFRKCHT*IWGYKL
Trigger: AAGTTTATACCCCCAAATCAATGTGTGGCACTTCCG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608744.5
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTAAGAGCAAATTAACATaGGCTTGTCAGTCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLKSKLT*ACQSLL
Trigger: GAGGAGAGACTGACAAGCCAATGTTAATTTGCTCTT...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAATTCATCAGACATATTaGATCGGTGTGCTAATGAGG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTIHQTY*IGVLMR
Trigger: CCTCATTAGCACACCGATCAAATATGTCTGATGAAT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGGGCCCATTTCTTACATaGCTTAGTGCTCAGTGTGTT +
Preference number: 5 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQGPFLT*LSAQCV
Trigger: AACACACTGAGCACTAAGCAATGTAAGAAATGGGCC...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGAGGTAATAAAGGGATaGTGGTTAGGAGCTTACCAA +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIEVIKG*WLGAYQ
Trigger: TTGGTAAGCTCCTAACCACAATCCCTTTATTACCTC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAAGTGCAAGATACCCGTaGCTTAGTCAAACGATTCTA +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKISARYP*LSQTIL
Trigger: TAGAATCGTTTGACTAAGCAACGGGTATCTTGCACT...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCAAAAGGGTTACTCCTaGGAAAGACAGAGTCAAGAA +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLQKGYS*ERQSQE
Trigger: TTCTTGACTCTGTCTTTCCAAGGAGTAACCCTTTTG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACACCAGTGGTGGAGTGTTaGCTAACAGTAAAGACTAAT +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITPVVEC*LTVKTN
Trigger: ATTAGTCTTTACTGTTAGCAAACACTCCACCACTGG...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CCAGTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATAACTCTGGGATTTTGTaGGAAATAAAGCCATATGGA +
Preference number: 5 (lower is better)
Translates to: PVICPNWYLKVRSPLIKYNSGIL*EIKPYG
Trigger: TCCATATGGCTTTATTTCCAACAAAATCCCAGAGTT...ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTACCTGAACCCTGAATaGTCCCAACTGAATGAAGCT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFYLNPE*SQLNEA
Trigger: AGCTTCATTCAGTTGGGACAATTCAGGGTTCAGGTA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCACCGAATTCATTATaGCCTAGGTCAAGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSPNSL*PRSSLS
Trigger: GGAAAGACTTGACCTAGGCAATAATGAATTCGGTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCTCAAATTTTGTATTaGATCCAGAACTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPQILY*IQNFRQ
Trigger: CTGCCTGAAGTTCTGGATCAAATACAAAATTTGAGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCAATACTCTTTGCTTaGTTTCTGGATGGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSILFA*FLDGLL
Trigger: CAGAAGCCCATCCAGAAACAAAGCAAAGAGTATTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACCTCTGGGTAAGGAGTaGGATATCGTTTTAGGTTTA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPPLGKE*DIVLGL
Trigger: TAAACCTAAAACGATATCCAACTCCTTACCCAGAGG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACATAGAAGCTTTTTGTaGTTGTGGCCCCTTACTACT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPHRSFL*LWPLTT
Trigger: AGTAGTAAGGGGCCACAACAACAAAAAGCTTCTATG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATGTCATAGAAGCTTTTaGTTGTTGTGGCCCCTTACT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPCHRSF*LLWPLT
Trigger: AGTAAGGGGCCACAACAACAAAAAGCTTCTATGACA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGTAACAAAGATACCCTaGTCAGAAGGTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITVTKIP*SEGLNG
Trigger: TCCATTCAAACCTTCTGACAAGGGTATCTTTGTTAC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTCCATTGGTCCAGCAATaGGCAAAATTTGTTTCTATG +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLPLVQQ*AKFVSM
Trigger: CATAGAAACAAATTTTGCCAATTGCTGGACCAATGG...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACATTTTTGGGTCTTTCTTaGGAAAAGAGTTGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITFLGLS*EKSCPS
Trigger: ACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAA...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CAA 90 bp ATGACACTAAGTTTCACATTGCCTTGTACTGTCTTTGATGTGGAACTTCTCTCACCCATCATGCTTCATTaGGACTTATTTGTACGATTT +
Preference number: 5 (lower is better)
Translates to: MTLSFTLPCTVFDVELLSPIMLH*DLFVRF
Trigger: AAATCGTACAAATAAGTCCAAATGAAGCATGATGGG...TGAGAGAAGTTCCACATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588515.5
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGAATAGCGACCCAAAGTaGTATCACTGCTTAGGAATT +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWENSDPK*YHCLGI
Trigger: AATTCCTAAGCAGTGATACAACTTTGGGTCGCTATT...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCATTAGAGGAAAATCTGCTTGAGTGTTCCATTGCCTTATTAGTCACTGATTTAAAGATTAAGCCTCTTTaGCTATACTGCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SLEENLLECSIALLVTDLKIKPL*LYCCGL
Trigger: CAAGCCACAGCAGTATAGCAAAAGAGGCTTAATCTT...TAAATCAGTGACTAATAAGGCAATGGAACACTCAAGCAGATTTTCCTCTAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp CATAGGAAAAACAAACACCAAATAGCTATGATCTCAGGCAGAATGGGAAAGATAGCAATTTGTTTTGAATaGGCTAGAGTACACCCAAGT +
Preference number: 5 (lower is better)
Translates to: HRKNKHQIAMISGRMGKIAICFE*ARVHPS
Trigger: ACTTGGGTGTACTCTAGCCAATTCAAAACAAATTGC...TATCTTTCCCATTCTGCCTGAGATCATAGCTATTTGGTGTTTGTTTTTCCTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATTCACATTTTCTAAGTaGATGCGCAATGACACTAAG +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEIFTFSK*MRNDTK
Trigger: CTTAGTGTCATTGCGCATCAACTTAGAAAATGTGAA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTACCCTAAACAGAGGTTaGAATACTGAGATACTGCTG +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFTLNRG*NTEILL
Trigger: CAGCAGTATCTCAGTATTCAAACCTCTGTTTAGGGT...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTGCTGTTTGATAGTACATGCAGGACCCTAAACAGAGGTTTGAATACTGAGATATCATTACTGAAGCCTTaGACAATCTCAATGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LLFDSTCRTLNRGLNTEISLLKP*TISMSS
Trigger: AGAACTCATTGAGATTGTCAAAGGCTTCAGTAATGA...TATCTCAGTATTCAAACCTCTGTTTAGGGTCCTGCATGTACTATCAAACAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp AGAAACAAAACTGCACCAATGCACAGCCAGAGGCTGACAATTAAAACTAATACAACCTTTAACAAGGATTaGGAGTTTCAGCATAATCTG +
Preference number: 5 (lower is better)
Translates to: RNKTAPMHSQRLTIKTNTTFNKD*EFQHNL
Trigger: CAGATTATGCTGAAACTCCAAATCCTTGTTAAAGGT...TGTATTAGTTTTAATTGTCAGCCTCTGGCTGTGCATTGGTGCAGTTTTGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAAACTTAGAGTAGACTaGCCCCCTCGGTTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPKLRVD*PPRFFK
Trigger: TTTGAAAAACCGAGGGGGCAAGTCTACTCTAAGTTT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTCAATTTGTGGAAGTATaGACAGAGCTGCAGAGGTAT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFQFVEV*TELQRY
Trigger: ATACCTCTGCAGCTCTGTCAATACTTCCACAAATTG...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTATGTATCAGTCCTCTATaGCCCTTCTTTTGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLCISPL*PFFCLS
Trigger: AGAAAGACAAAAGAAGGGCAATAGAGGACTGATACA...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGGAGATGAAACACAATTaGTTGCTTTATAAGGGTGGG +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWEEMKHN*LLYKGG
Trigger: CCCACCCTTATAAAGCAACAAATTGTGTTTCATCTC...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTGCTCCCAGTGGTCCTaGTCATTAATTATGCATTTA +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWECSQWS*SLIMHL
Trigger: TAAATGCATAATTAATGACAAGGACCACTGGGAGCA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 90 bp CAATCTCTTCAGGAAGAAATTCTAATTTGTTGGAGCGTAGAGACATaGCTGTTACATTCTTACAACTTCCAATTTCTCTGGGTAATTCTG +
Preference number: 5 (lower is better)
Translates to: QSLQEEILICWSVET*LLHSYNFQFLWVIL
Trigger: CAGAATTACCCAGAGAAATTGGAAGTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATTTCTTCCTGAAGAGATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAGTTTGTGCATTGACTTaGGTAGAGTTTTCAAGTGAT +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITVCALT*VEFSSD
Trigger: ATCACTTGAAAACTCTACCAAAGTCAATGCACAAAC...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGGAAGAAATTCTAATTaGTTGGAGCGTAGAGACATG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPGRNSN*LERRDM
Trigger: CATGTCTCTACGCTCCAACAAATTAGAATTTCTTCC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATCAGTTGATTCTTTTTaGTCCTTCCCTAGCAGAACA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPSVDSF*SFPSRT
Trigger: TGTTCTGCTAGGGAAGGACAAAAAAGAATCAACTGA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTTGAGGATTGAAGCTTaGGTCAAACTGATAGACTTT +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLLRIEA*VKLIDF
Trigger: AAAGTCTATCAGTTTGACCAAAGCTTCAATCCTCAA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TGTGTGTGCTTCCGTGCTCCGAAATTATATGAAATCCATTTTGAGAAGAAACTTTGCTGGATGGTCACTTaGTTTATATTTCCTTCATAC +
Preference number: 5 (lower is better)
Translates to: CVCFRAPKLYEIHFEKKLCWMVT*FIFPSY
Trigger: GTATGAAGGAAATATAAACAAAGTGACCATCCAGCA...AAGTTTCTTCTCAAAATGGATTTCATATAATTTCGGAGCACGGAAGCACACACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTTTGAATGGATTTCCTaGTCCACTAATTCCACCACT +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFFEWIS*STNSTT
Trigger: AGTGGTGGAATTAGTGGACAAGGAAATCCATTCAAA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTATCAGCATTTCATATTTaGACTTGTGCCATCTGGGAA +
Preference number: 5 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLSAFHI*TCAIWE
Trigger: TTCCCAGATGGCACAAGTCAAAATATGAAATGCTGA...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp ATCAGGGAGTATGACAGAAAAACGAGCAATTATATTCGGTCTCTGAAGAATTTAAGCAAGATGGTGACCTaGTATGTTGAATTTCAAGCT +
Preference number: 5 (lower is better)
Translates to: IREYDRKTSNYIRSLKNLSKMVT*YVEFQA
Trigger: AGCTTGAAATTCAACATACAAGGTCACCATCTTGCT...TAAATTCTTCAGAGACCGAATATAATTGCTCGTTTTTCTGTCATACTCCCTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAGTAAGCAATTTGTTTaGAATTGGCTAGAGTACACC +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLSKQFV*NWLEYT
Trigger: GGTGTACTCTAGCCAATTCAAAACAAATTGCTTACT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp GTAATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAACACTAAGTTTCACATaGCCTTGTACTGTCTTTGAT +
Preference number: 5 (lower is better)
Translates to: VICPNWYLKVRSPLIKYLTLSFT*PCTVFD
Trigger: ATCAAAGACAGTACAAGGCAATGTGAAACTTAGTGT...TAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000588515.5
ENST00000608744.5
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGTTCACATTTTCTAAGTaGATGCGCAATGACACTAAG +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKFTFSK*MRNDTK
Trigger: CTTAGTGTCATTGCGCATCAACTTAGAAAATGTGAA...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITKVRSP*IKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAAGGTCAGGAGTCCTTaGATTAAGTATTTAAAGGCA +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKKVRSP*IKYLKA
Trigger: TGCCTTTAAATACTTAATCAAAGGACTCCTGACCTT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000588515.5
ENST00000608744.5
ENST00000608815.5
ENST00000609498.5
ENST00000651989.2
CDS-3UTR CAA 90 bp TACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCTCCATTTTCTTTAGCTCACCAGTaGAAAGATATGTCAGTCCTA +
Preference number: 5 (lower is better)
Translates to: YLKVRSPLIKYLKAQSPFSLAHQ*KDMSVL
Trigger: TAGGACTGACATATCTTTCAACTGGTGAGCTAAAGA...AAATGGAGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAAGATACTTGGCTATTaGTTAGGCTGCTTATTCAAC +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITKILGY*LGCLFN
Trigger: GTTGAATAAGCAGCCTAACAAATAGCCAAGTATCTT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCATGGTTGCTATTTATCTaGTCTAGCAAGGCATTCACA +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPWLLFI*SSKAFT
Trigger: TGTGAATGCCTTGCTAGACAAGATAAATAGCAACCA...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ATATGCCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGAGTGGCTTGATAATTTaGGCTGAACTATATGACATC +
Preference number: 5 (lower is better)
Translates to: ICPNWYLKVRSPLIKYLKSGLII*AELYDI
Trigger: GATGTCATATAGTTCAGCCAAAATTATCAAGCCACT...CTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TTTAAAGGCACAATCTCCATTTTCAAATGTAAGCATGCTGCACAATCCATCACAAGCTTTTACAGTGGCTaGATAATTTTGGCTGAACTA +
Preference number: 5 (lower is better)
Translates to: FKGTISIFKCKHAAQSITSFYSG*IILAEL
Trigger: TAGTTCAGCCAAAATTATCAAGCCACTGTAAAAGCT...TGTGATGGATTGTGCAGCATGCTTACATTTGAAAATGGAGATTGTGCCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCTTTCTACTTTGAGATCAACAGGCCAGATTCTATCTCTATAAAAGTTTGGGAGTATCTCTATAAAAGTTaGGGAGGGGTAACATGGTTT +
Preference number: 5 (lower is better)
Translates to: SFYFEINRPDSISIKVWEYLYKS*GGVTWF
Trigger: AAACCATGTTACCCCTCCCAAACTTTTATAGAGATA...CTCCCAAACTTTTATAGAGATAGAATCTGGCCTGTTGATCTCAAAGTAGAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAGTTTGTGCATTGACTTaGGTAGAGTTTTCAAGTGAT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPVCALT*VEFSSD
Trigger: ATCACTTGAAAACTCTACCAAAGTCAATGCACAAAC...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAATTGTTGCAACATATaGGATGACAATAAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPNCCNI*DDNKRS
Trigger: GGACCTCTTATTGTCATCCAATATGTTGCAACAATT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCAAGAAATTCTAATTTGTaGGAGCGTAGAGACATGACT +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPRNSNL*ERRDMT
Trigger: AGTCATGTCTCTACGCTCCAACAAATTAGAATTTCT...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGCGAGCAGCTATGCCTTaGAATTTAACATATGATAGA +
Preference number: 5 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQRAAMP*NLTYDR
Trigger: TCTATCATATGTTAAATTCAAAGGCATAGCTGCTCG...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp ACCTATAGAATTAGTGAGGTTTATACCCCTCAAGTGTTTAGTGATTCTATTCAGTTCAAGAGATTCTGGTaGCTATTTATCTTGTCTAGC +
Preference number: 5 (lower is better)
Translates to: TYRISEVYTPQVFSDSIQFKRFW*LFILSS
Trigger: GCTAGACAAGATAAATAGCAACCAGAATCTCTTGAA...CTGAATAGAATCACTAAACACTTGAGGGGTATAAACCTCACTAATTCTATAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS-3UTR CAA 90 bp TCAGTGCTAACATATAGTATTATACATTTGGCACTAATGTTTGCCATTGGTCCACATATAAGTAGGGCTTaGATGGAATTAGCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: SVLTYSIIHLALMFAIGPHISRA*MELAKK
Trigger: CTTCTTTGCTAATTCCATCAAAGCCCTACTTATATG...TGGACCAATGGCAAACATTAGTGCCAAATGTATAATACTATATGTTAGCACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS TCA 72 bp CCAGGGGCCAGGGCGCAGCGGGCGTCTCGGAGGGGCTaGGCGCTCCGCAACTGCAGGAGGCGGTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: PGARAQRASRRG*ALRNCRRRWRW
Trigger: CCACCGCCACCGCCTCCTGCAGTTGCGGAGCGCTCAGCCCCTCCGAGACGCCCGCTGCGCCCTGGCCCCTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS GCA 72 bp AGTGGGCGGCTGCAGGTCCCGCCGGCGAGAACCCGCTaGACTGGGGCTGGGTGTCCGTGGCTTCAAGCCCGG +
Preference number: 6 (lower is better)
Translates to: SGRLQVPPARTR*TGAGCPWLQAR
Trigger: CCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTGCAGCCGCCCACT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 72 bp GCAGGTCCCGCCGGCGAGAACCCGCTGCACTGGGGCTaGGTGTCCGTGGCTTCAAGCCCGGTGTTCACCCGG +
Preference number: 6 (lower is better)
Translates to: AGPAGENPLHWG*VSVASSPVFTR
Trigger: CCGGGTGAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 72 bp GCGGCTGCAGGTCCCGCCGGCGAGAACCCGCTGCACTaGGGCTGGGTGTCCGTGGCTTCAAGCCCGGTGTTC +
Preference number: 6 (lower is better)
Translates to: AAAGPAGENPLH*GWVSVASSPVF
Trigger: GAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGGCGGGACCTGCAGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CCA 72 bp CCGGCGAGAACCCGCTGCACTGGGGCTGGGTGTCCGTaGCTTCAAGCCCGGTGTTCACCCGGAGTAGGGTCC +
Preference number: 6 (lower is better)
Translates to: PARTRCTGAGCP*LQARCSPGVGS
Trigger: GGACCCTACTCCGGGTGAACACCGGGCTTGAAGCCACGGACACCCAGCCCCAGTGCAGCGGGTTCTCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS GCA 72 bp AAAGGCGAATCCTGCACCCAACTCCGTAACAACCCCTaGCCGTTGCCGCGCCTGTGCAGGGCGAGGATCCCC +
Preference number: 6 (lower is better)
Translates to: KGESCTQLRNNP*PLPRLCRARIP
Trigger: GGGGATCCTCGCCCTGCACAGGCGCGGCAACGGGCAGGGGTTGTTACGGAGTTGGGTGCAGGATTCGCCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CAA 72 bp GGAGTCGGCCCTTCTCAGGAAGCCCGCCCTGGCCCCTaGGCTTGCGAACTGGGCATTCACCACAGCATCCTC +
Preference number: 6 (lower is better)
Translates to: GVGPSQEARPGP*ACELGIHHSIL
Trigger: GAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGAGAAGGGCCGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp TTAGACCATGATGCCAGTGCCCTTCAGGTGGACGGCTaGAGAGGTTCCCGCGGGAAGCGGCTGAGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: LDHDASALQVDG*RGSRGKRLRGS
Trigger: GCTTCCCCTCAGCCGCTTCCCGCGGGAACCTCTCCAGCCGTCCACCTGAAGGGCACTGGCATCATGGTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651989.2
CDS CAA 90 bp CCAGGGAGTCGGCCCTTCTCAGGAAGCCCGCCCTGGCCCCTTGGCTaGCGAACTGGGCATTCACCACAGCATCCTCATTCACAGATGGCT +
Preference number: 6 (lower is better)
Translates to: PGSRPFSGSPPWPLG*RTGHSPQHPHSQMA
Trigger: AGCCATCTGTGAATGAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGAGAAGGGCCGACTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp GCTCACCAGGGAGTCGGCCCTTCTCAGGAAGCCCGCCCTGGCCCCTaGGCTTGCGAACTGGGCATTCACCACAGCATCCTCATTCACAGA +
Preference number: 6 (lower is better)
Translates to: AHQGVGPSQEARPGP*ACELGIHHSILIHR
Trigger: TCTGTGAATGAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGAGAAGGGCCGACTCCCTGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp CGGCCCTTCTCAGGAAGCCCGCCCTGGCCCCTTGGCTaGCGAACTGGGCATTCACCACAGCATCCTCATTCA +
Preference number: 6 (lower is better)
Translates to: RPFSGSPPWPLG*RTGHSPQHPHS
Trigger: TGAATGAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGAGAAGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp ATACGGCTGCTGCTCCCGGCTGCGATGCTGAAGGCTTaGGGACCCCATCAACGTCTGGATGTGGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: IRLLLPAAMLKA*GPHQRLDVAAC
Trigger: GCAGGCAGCCACATCCAGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGCCGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp CTCAGGAAGCCCGCCCTGGCCCCTTGGCTTGCGAACTaGGCATTCACCACAGCATCCTCATTCACAGATGGC +
Preference number: 6 (lower is better)
Translates to: LRKPALAPWLAN*AFTTASSFTDG
Trigger: GCCATCTGTGAATGAGGATGCTGTGGTGAATGCCCAGTTCGCAAGCCAAGGGGCCAGGGCGGGCTTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp AGGTTCTCCATCATCGCCGGCGGGAGAAACTGCCCATaGGGTTTCGGAGAGCGTAGTCGTGCAGCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: RFSIIAGGRNCP*GFGERSRAAAK
Trigger: CTTGGCAGCTGCACGACTACGCTCTCCGAAACCTCATGGGCAGTTTCTCCCGCCGGCGATGATGGAGAACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000651989.2
CDS CCA 72 bp GGGGGACGGGCATATCTTGGATCTGCTGATCACACCTaGCCCATGGTGTGCAGCAATCGCCAGACAGTCTGG +
Preference number: 6 (lower is better)
Translates to: GGRAYLGSADHT*PMVCSNRQTVW
Trigger: CCAGACTGTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp GAAAGTATCACTCATGGGCAGCCGGTCAGGACGCTGTaGTATATTGCCTGGGGGAACAGCCTCCCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: ESITHGQPVRTL*YIAWGNSLPLA
Trigger: AGCCAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCCTGACCGGCTGCCCATGAGTGATACTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp TCACTCATGGGCAGCCGGTCAGGACGCTGTGGTATATaGCCTGGGGGAACAGCCTCCCGCTGGCTGAGTAAT +
Preference number: 6 (lower is better)
Translates to: SLMGSRSGRCGI*PGGTASRWLSN
Trigger: ATTACTCAGCCAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCCTGACCGGCTGCCCATGAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp ATAGAGGGGAATCCAGGAAGGTGCCACGTTAGACCATaGTGCCAGTGCCCTTCAGGTGGACGGCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: IEGNPGRCHVRP*CQCPSGGRLER
Trigger: CCTCTCCAGCCGTCCACCTGAAGGGCACTGGCATCATGGTCTAACGTGGCACCTTCCTGGATTCCCCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310961.9
ENST00000651989.2
CDS TCA 72 bp GGGTCATTCTGGGGGACGGGCATATCTTGGATCTGCTaGTCACACCTGGCCCATGGTGTGCAGCAATCGCCA +
Preference number: 6 (lower is better)
Translates to: GSFWGTGISWIC*SHLAHGVQQSP
Trigger: TGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCCGTCCCCCAGAATGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp TTCAGGAACTGGGACTCAGTCACTGTAACGCTGCTTTaGCGATCCAGCCCTCCCCTATATGGGGGTCTGCCG +
Preference number: 6 (lower is better)
Translates to: FRNWDSVTVTLL*RSSPPLYGGLP
Trigger: CGGCAGACCCCCATATAGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGTGACTGAGTCCCAGTTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp CACCTCGGAAACATCGGCATGGCACCAGACGGCCGATaGTTTTCCGTTTGGTGGTCATCTCCAGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: HLGNIGMAPDGR*FSVWWSSPGTA
Trigger: TGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp GGGCATATCTTGGATCTGCTGATCACACCTGGCCCATaGTGTGCAGCAATCGCCAGACAGTCTGGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GHILDLLITPGP*CAAIARQSGRL
Trigger: CAACCTGCCAGACTGTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp CTGCTGGAGGCCACTTATACAACCCCATGCCAGCTGTaGGTCATTCTGGGGGACGGGCATATCTTGGATCTG +
Preference number: 6 (lower is better)
Translates to: LLEATYTTPCQL*VILGDGHILDL
Trigger: CAGATCCAAGATATGCCCGTCCCCCAGAATGACCCACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp TTTCAGGAACTGGGACTCAGTCACTGTAACGCTGCTTaGGCGATCCAGCCCTCCCCTATATGGGGGTCTGCC +
Preference number: 6 (lower is better)
Translates to: FQELGLSHCNAA*AIQPSPIWGSA
Trigger: GGCAGACCCCCATATAGGGGAGGGCTGGATCGCCAAAGCAGCGTTACAGTGACTGAGTCCCAGTTCCTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp GTGAAAGTATCACTCATGGGCAGCCGGTCAGGACGCTGTGGTATATaGCCTGGGGGAACAGCCTCCCGCTGGCTGAGTAATGGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: VKVSLMGSRSGRCGI*PGGTASRWLSNGFE
Trigger: TTCAAAGCCATTACTCAGCCAGCGGGAGGCTGTTCCCCCAGGCAATATACCACAGCGTCCTGACCGGCTGCCCATGAGTGATACTTTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp TATCTTGGATCTGCTGATCACACCTGGCCCATGGTGTaGAGCAATCGCCAGACAGTCTGGCAGGTTGGAGAG +
Preference number: 6 (lower is better)
Translates to: YLGSADHTWPMV*SNRQTVWQVGE
Trigger: CTCTCCAACCTGCCAGACTGTCTGGCGATTGCTGCACACCATGGGCCAGGTGTGATCAGCAGATCCAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp GGGACTGACTGGCTTCGAGACATACTGGACATACCATaGTCTGGTCCCAGCATCTTATCCGGTCGTTCGTGG +
Preference number: 6 (lower is better)
Translates to: GTDWLRDILDIP*SGPSILSGRSW
Trigger: CCACGAACGACCGGATAAGATGCTGGGACCAGAGCATGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp CATCGGCATGGCACCAGACGGCCGATGATTTTCCGTTaGGTGGTCATCTCCAGGCACTGCAACTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: HRHGTRRPMIFR*VVISRHCNSSS
Trigger: TGAAGAGGAGTTGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370958.5
ENST00000651989.2
CDS CAA 72 bp CATCGGCATGGCACCAGACGGCCGATGATTTTCCGTTaGGTGGTCATCTCCAGGCACTGCACTAGAGAAACG +
Preference number: 6 (lower is better)
Translates to: HRHGTRRPMIFR*VVISRHCTRET
Trigger: CGTTTCTCTAGTGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651217.1
CDS TCA 72 bp CGAGTTCCAGGGGAACACCAACAATCCTGTCTTGCCTaGTCAAAGGCCTGCGTCCATGCGAAGATGTGCTTC +
Preference number: 6 (lower is better)
Translates to: RVPGEHQQSCLA*SKACVHAKMCF
Trigger: GAAGCACATCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGTGTTCCCCTGGAACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp GGGGGTCTGCCGTACCTATCAGTTGGGGGCAGCTCATaGGGCTCATTGACCCTTCTAAACATGGCCATTTCT +
Preference number: 6 (lower is better)
Translates to: GGLPYLSVGGSS*GSLTLLNMAIS
Trigger: AGAAATGGCCATGTTTAGAAGGGTCAATGAGCCTCATGAGCTGCCCCCAACTGATAGGTACGGCAGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp GCGGGCTCACTCCTCTTCAGGCCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGGACTTCTCTGGTATTG +
Preference number: 6 (lower is better)
Translates to: AGSLLFRPLPKC*TNLFTRTSLVL
Trigger: CAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCTGAAGAGGAGTGAGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS GCA 72 bp GTAGCGGGCTCACTCCTCTTCAGGCCTCTTCCGAAGTaGTGCACGAACCTCTTTACAAGGACTTCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: VAGSLLFRPLPK*CTNLFTRTSLV
Trigger: TACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCTGAAGAGGAGTGAGCCCGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS GCA 72 bp GCTGCAACTGGCAATGGAGTACACATGCTCCTTTCCTaGTGGAGGCCACTTATACAACCCCATGCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: AATGNGVHMLLS*WRPLIQPHASC
Trigger: ACAGCTGGCATGGGGTTGTATAAGTGGCCTCCAGCAGGAAAGGAGCATGTGTACTCCATTGCCAGTTGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp CTGCTCGAGTTCCAGGGGAACACCAACAATCCTGTCTaGCCTGATCAAAGGCCTGCGTCCATGCGAAGATGT +
Preference number: 6 (lower is better)
Translates to: LLEFQGNTNNPV*PDQRPASMRRC
Trigger: ACATCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGTGTTCCCCTGGAACTCGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp CCTCGGAAACATCGGCATGGCACCAGACGGCCGATGATTTTCCGTTaGGTGGTCATCTCCAGGCACTGCATTGCTAGTTATTCCTGTCTC +
Preference number: 6 (lower is better)
Translates to: PRKHRHGTRRPMIFR*VVISRHCIASYSCL
Trigger: GAGACAGGAATAACTAGCAATGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATGTTTCCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS GCA 72 bp TGTTTATATTTCCTTCATACGGCTGCTGCTCCCGGCTaGGATGCTGAAGGCTTTGGGACCCCATCAACGTCT +
Preference number: 6 (lower is better)
Translates to: CLYFLHTAAAPG*DAEGFGTPSTS
Trigger: AGACGTTGATGGGGTCCCAAAGCCTTCAGCATCGCAGCCGGGAGCAGCAGCCGTATGAAGGAAATATAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp CAGGCACTGCAACTCCTCTTCAGGCCTCTTCCGAAGTaGTGCACGAACCTCTTTACAAGGACTTCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: QALQLLFRPLPK*CTNLFTRTSLV
Trigger: TACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCTGAAGAGGAGTTGCAGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370958.5
ENST00000651989.2
CDS CAA 72 bp CATCGGCATGGCACCAGACGGCCGATGATTTTCCGTTaGGTGGTCATCTCCAGGCACTGCATTGCTAGTTAT +
Preference number: 6 (lower is better)
Translates to: HRHGTRRPMIFR*VVISRHCIASY
Trigger: ATAACTAGCAATGCAGTGCCTGGAGATGACCACCAAACGGAAAATCATCGGCCGTCTGGTGCCATGCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS CAA 90 bp GTGTGTAGACTGCTCGAGTTCCAGGGGAACACCAACAATCCTGTCTaGCCTGATCAAAGGCCTGCGTCCATGCGAAGATGTGCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: VCRLLEFQGNTNNPV*PDQRPASMRRCASR
Trigger: TCTAGAAGCACATCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGTTGGTGTTCCCCTGGAACTCGAGCAGTCTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp TGTTGTCATAATGCGAGCCATCAGTCCAGTTGTCAGTaGAAGTATCACTCATGGGCAGCCGGTCAGGACGCT +
Preference number: 6 (lower is better)
Translates to: CCHNASHQSSCQ*KYHSWAAGQDA
Trigger: AGCGTCCTGACCGGCTGCCCATGAGTGATACTTTCACTGACAACTGGACTGATGGCTCGCATTATGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp TCCGTAGGTGAGCATCTCATCATCCAGCATTGGGACTaGCTGGCTTCGAGACATACTGGACATACCATGCTC +
Preference number: 6 (lower is better)
Translates to: SVGEHLIIQHWD*LASRHTGHTML
Trigger: GAGCATGGTATGTCCAGTATGTCTCGAAGCCAGTCAGTCCCAATGCTGGATGATGAGATGCTCACCTACGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp GCACTGCAACTCCTCTTCAGGCCTCTTCCGAAGTGCTaGACGAACCTCTTTACAAGGACTTCTCTGGTATTG +
Preference number: 6 (lower is better)
Translates to: ALQLLFRPLPKC*TNLFTRTSLVL
Trigger: CAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCGGAAGAGGCCTGAAGAGGAGTTGCAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370958.5
ENST00000651989.2
CDS CCA 72 bp AGTAATGGTGTCCGGAGGTACATCCCGCCTCCCAAGTaGATAAGGATTCCATTGGCCACTAGGAGATACATC +
Preference number: 6 (lower is better)
Translates to: SNGVRRYIPPPK*IRIPLATRRYI
Trigger: GATGTATCTCCTAGTGGCCAATGGAATCCTTATCCACTTGGGAGGCGGGATGTACCTCCGGACACCATTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp CTGTCTTCAAACGGACTAGGGGTTCTGGTCCAATTCTGCCAAGGATaGGAAGGAGGCACTTCTGTTTCTGGTGTGTGTCTGTGTGTAGAC +
Preference number: 6 (lower is better)
Translates to: LSSNGLGVLVQFCQG*EGGTSVSGVCLCVD
Trigger: GTCTACACACAGACACACACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAACCCCTAGTCCGTTTGAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp CTGTCTTCAAACGGACTAGGGGTTCTGGTCCAATTCTaGCAAGGATTGGAAGGAGGCACTTCTGTTTCTGGT +
Preference number: 6 (lower is better)
Translates to: LSSNGLGVLVQF*QGLEGGTSVSG
Trigger: ACCAGAAACAGAAGTGCCTCCTTCCAATCCTTGGCAGAATTGGACCAGAACCCCTAGTCCGTTTGAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp GTCCTAGGGGGCTTTCAACCTGGATCTCCAGTAATATaGCCAAACTGGTACTTGAAGGTCAGGAGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: VLGGFQPGSPVI*PNWYLKVRSPL
Trigger: CAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGCCCCCTAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608470.5
CDS CCA 72 bp CGAAGTGCTGCACGAACCTCTTTACAAGGACTTCTCTaGTATTGCGGGGGATTCCTTCCCCTTATTAGGTTC +
Preference number: 6 (lower is better)
Translates to: RSAARTSLQGLL*YCGGFLPLIRF
Trigger: GAACCTAATAAGGGGAAGGAATCCCCCGCAATACCAGAGAAGTCCTTGTAAAGAGGTTCGTGCAGCACTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000651989.2
CDS CCA 72 bp TTTCAACCTGTCTGCCACTTAGAGAGGGAAGAGTGGTaGATTGTGCTGCAACTGGCAATGGAGTACACATGC +
Preference number: 6 (lower is better)
Translates to: FQPVCHLEREEW*IVLQLAMEYTC
Trigger: GCATGTGTACTCCATTGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTCTAAGTGGCAGACAGGTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp TCAGGCAATGGGCTGGTAGTGGGGGTTGTCTCTAATTaGGAAGGAAAAGCGGTCCTGTCTTCAAACGGACTA +
Preference number: 6 (lower is better)
Translates to: SGNGLVVGVVSN*EGKAVLSSNGL
Trigger: TAGTCCGTTTGAAGACAGGACCGCTTTTCCTTCCAAATTAGAGACAACCCCCACTACCAGCCCATTGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp ACCGTAACTCTCTGTACTGTAGCTTCTCGCAGACAATGGCCTCCTTaGGGTAAGGTTTTTAACCGGAAAACTTCCCGCCTGAGCTTTCAC +
Preference number: 6 (lower is better)
Translates to: TVTLCTVASRRQWPP*GKVFNRKTSRLSFH
Trigger: GTGAAAGCTCAGGCGGGAAGTTTTCCGGTTAAAAACCTTACCCAAAGGAGGCCATTGTCTGCGAGAAGCTACAGTACAGAGAGTTACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp AGCTTCTATATGTCTAAGCAGCTGTTGTCTCCAGTCTaGAGGCATTTTACCACAGCTCTCCTCTCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: SFYMSKQLLSPV*RHFTTALLSLH
Trigger: GTGAAGGGAGAGGAGAGCTGTGGTAAAATGCCTGCAGACTGGAGACAACAGCTGCTTAGACATATAGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp AGGTACATCCCGCCTCCCAAGTGGATAAGGATTCCATaGGCCACTAGGAGATACATCTTCTTGTCCATTGTC +
Preference number: 6 (lower is better)
Translates to: RYIPPPKWIRIP*ATRRYIFLSIV
Trigger: GACAATGGACAAGAAGATGTATCTCCTAGTGGCCAATGGAATCCTTATCCACTTGGGAGGCGGGATGTACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp GATCCAGAACTTCAGGCAGCTCACCGAATTCATTATTaGCTAGGTCAAGTCTTTCCAACTGGGCCAGTTTGT +
Preference number: 6 (lower is better)
Translates to: DPELQAAHRIHY*LGQVFPTGPVC
Trigger: ACAAACTGGCCCAGTTGGAAAGACTTGACCTAGGCAATAATGAATTCGGTGAGCTGCCTGAAGTTCTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp TTATTTCAACCTGTCTGCCACTTAGAGAGGGAAGAGTaGTGGATTGTGCTGCAACTGGCAATGGAGTACACA +
Preference number: 6 (lower is better)
Translates to: LFQPVCHLEREE*WIVLQLAMEYT
Trigger: TGTGTACTCCATTGCCAGTTGCAGCACAATCCACCACTCTTCCCTCTCTAAGTGGCAGACAGGTTGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp TGCGAAGATGTGCTTCTAGATTTCGAACTTAAGAGAGGATTACTGTaGGCATTCTCGGCTGTGGTTTCCTCAGCAACAAACCCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: CEDVLLDFELKRGLL*AFSAVVSSATNPVL
Trigger: CAACACAGGGTTTGTTGCTGAGGAAACCACAGCCGAGAATGCCAACAGTAATCCTCTCTTAAGTTCGAAATCTAGAAGCACATCTTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp GCTGAAGACTGCAGTGGGAGTAATCTAAAACTGAGATaGTTTCTTCTTCACCTCGGAAACATCGGCATGGCA +
Preference number: 6 (lower is better)
Translates to: AEDCSGSNLKLR*FLLHLGNIGMA
Trigger: TGCCATGCCGATGTTTCCGAGGTGAAGAAGAAATCATCTCAGTTTTAGATTACTCCCACTGCAGTCTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310961.9
ENST00000370958.5
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp AGGGGGTGGTATCCTCTTTTCGGCTTTCACTTCCACTaGTCCTTGAGGATTGAAGCTTTGGTCAAACTGATA +
Preference number: 6 (lower is better)
Translates to: RGWYPLFGFHFH*SLRIEALVKLI
Trigger: TATCAGTTTGACCAAAGCTTCAATCCTCAAGGATCAGTGGAAGTGAAAGCCGAAAAGAGGATACCACCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp ATCTCCAGGCACTGCATTGCTAGTTATTCCTGTCTCTaGAGACTTCTAGGTTGTGACCACTTTGACTTGCAT +
Preference number: 6 (lower is better)
Translates to: ISRHCIASYSCL*RLLGCDHFDLH
Trigger: ATGCAAGTCAAAGTGGTCACAACCTAGAAGTCTGCAGAGACAGGAATAACTAGCAATGCAGTGCCTGGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310961.9
CDS GCA 72 bp TCAAATTCAAAGGCAACAGTCATGCGTTGTTGTCTCTaGTCTTCCCACAGTGTAGGGTTAAAGCTGTCACTG +
Preference number: 6 (lower is better)
Translates to: SNSKATVMRCCL*SSHSVGLKLSL
Trigger: CAGTGACAGCTTTAACCCTACACTGTGGGAAGAGCAGAGACAACAACGCATGACTGTTGCCTTTGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp ACAATCCTGTCTTGCCTGATCAAAGGCCTGCGTCCATaGGAAGATGTGCTTCTAGATTTCGAACTTAAGAGA +
Preference number: 6 (lower is better)
Translates to: TILSCLIKGLRP*EDVLLDFELKR
Trigger: TCTCTTAAGTTCGAAATCTAGAAGCACATCTTCGCATGGACGCAGGCCTTTGATCAGGCAAGACAGGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp ACCGTAACTCTCTGTACTGTAGCTTCTCGCAGACAATaGCCTCCTTTGGGTAAGGTTTTTAACCGGAAAACT +
Preference number: 6 (lower is better)
Translates to: TVTLCTVASRRQ*PPLGKVFNRKT
Trigger: AGTTTTCCGGTTAAAAACCTTACCCAAAGGAGGCCATTGTCTGCGAGAAGCTACAGTACAGAGAGTTACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp TGTATAGTCTCAGGCGATTGGGCAAGGGGCACACTCTaGATCTTCAGATGTTTGGTAGAGTTTTCAAGTGAT +
Preference number: 6 (lower is better)
Translates to: CIVSGDWARGTL*IFRCLVEFSSD
Trigger: ATCACTTGAAAACTCTACCAAACATCTGAAGATCCAGAGTGTGCCCCTTGCCCAATCGCCTGAGACTATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS GCA 72 bp TGGTGCAATCCTGTTACCCCACAAAGAATTATGTACTaGATCTTTAGCTGTTGTCTGCAAGGACCCCACTTT +
Preference number: 6 (lower is better)
Translates to: WCNPVTPQRIMY*IFSCCLQGPHF
Trigger: AAAGTGGGGTCCTTGCAGACAACAGCTAAAGATGCAGTACATAATTCTTTGTGGGGTAACAGGATTGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp AAGACTCCTGTTGGGATTGGAATCATGATACTCCCATaGTACGCCTGGAGAAAAAGGACTAGGTATTTCAGT +
Preference number: 6 (lower is better)
Translates to: KTPVGIGIMILP*YAWRKRTRYFS
Trigger: ACTGAAATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAGTATCATGATTCCAATCCCAACAGGAGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp GGGGGCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTGGTACTaGAAGGTCAGGAGTCCTTTGATTAAGTATTTAAAGGCACAATCT +
Preference number: 6 (lower is better)
Translates to: GGFQPGSPVICPNWY*KVRSPLIKYLKAQS
Trigger: AGATTGTGCCTTTAAATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGCCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000608470.5
CDS TCA 72 bp AAGACATTACTAAGACTCCTGTTGGGATTGGAATCATaGTACTCCCATGGTACGCCTGGAGAAAAAGGACTA +
Preference number: 6 (lower is better)
Translates to: KTLLRLLLGLES*YSHGTPGEKGL
Trigger: TAGTCCTTTTTCTCCAGGCGTACCATGGGAGTATCATGATTCCAATCCCAACAGGAGTCTTAGTAATGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp CCGAATTCATTATTGCCTAGGTCAAGTCTTTCCAACTaGGCCAGTTTGTGCATTGACTTTGGTAGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: PNSLLPRSSLSN*ASLCIDFGRVF
Trigger: GAAAACTCTACCAAAGTCAATGCACAAACTGGCCCAGTTGGAAAGACTTGACCTAGGCAATAATGAATTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp GTTGGGATTGGAATCATGATACTCCCATGGTACGCCTaGAGAAAAAGGACTAGGTATTTCAGTAGATTCCTT +
Preference number: 6 (lower is better)
Translates to: VGIGIMILPWYA*RKRTRYFSRFL
Trigger: AAGGAATCTACTGAAATACCTAGTCCTTTTTCTCCAGGCGTACCATGGGAGTATCATGATTCCAATCCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CCA 72 bp GGCTTTCAACCTGGATCTCCAGTAATATGCCCAAACTaGTACTTGAAGGTCAGGAGTCCTTTGATTAAGTAT +
Preference number: 6 (lower is better)
Translates to: GFQPGSPVICPN*YLKVRSPLIKY
Trigger: ATACTTAATCAAAGGACTCCTGACCTTCAAGTACCAGTTTGGGCATATTACTGGAGATCCAGGTTGAAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000608470.5
CDS CCA 72 bp TGGATGAACAAAAGAATCCTCCACTGTAATCTCCTTTaGGGCTACCGGCCACTTGTGTTCATATTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: WMNKRILHCNLL*GYRPLVFIFFF
Trigger: AAAGAAAAATATGAACACAAGTGGCCGGTAGCCCCAAAGGAGATTACAGTGGAGGATTCTTTTGTTCATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp CAGTTGGATTTGAATTCTCAACACGCACTCCATGGCTaGGCTTACCCACCAAATTTTGAACAGATTTTACCA +
Preference number: 6 (lower is better)
Translates to: QLDLNSQHALHG*AYPPNFEQILP
Trigger: TGGTAAAATCTGTTCAAAATTTGGTGGGTAAGCCAAGCCATGGAGTGCGTGTTGAGAATTCAAATCCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310961.9
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp AATAACACCTTTAGAAGATTCCGGGCGGCAGTGGATTaGAGAAAAGACATTACTAAGACTCCTGTTGGGATT +
Preference number: 6 (lower is better)
Translates to: NNTFRRFRAAVD*RKDITKTPVGI
Trigger: AATCCCAACAGGAGTCTTAGTAATGTCTTTTCTCAAATCCACTGCCGCCCGGAATCTTCTAAAGGTGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp ATTTTTGGGTCTTTCTTTGGAAAAGAGTTGTCCCAGTaGGCAAATATAGCACCCATGAATAATGAGGATCAA +
Preference number: 6 (lower is better)
Translates to: IFGSFFGKELSQ*ANIAPMNNEDQ
Trigger: TTGATCCTCATTATTCATGGGTGCTATATTTGCGCACTGGGACAACTCTTTTCCAAAGAAAGACCCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607936.5
CDS CAA 72 bp AAAAGTCCTATAGAATCAGGCAATTGTTGCAACATATaGGATGACAATAAGAGGTCCTCAAGGGCTTCACAT +
Preference number: 6 (lower is better)
Translates to: KSPIESGNCCNI*DDNKRSSRASH
Trigger: ATGTGAAGCCCTTGAGGACCTCTTATTGTCATCCAATATGTTGCAACAATTGCCTGATTCTATAGGACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp AAAGATACCCTTGTCAGAAGGTTTGAATGGATTTCCTaGTCCACTAATTCCACCACTGATACTAAATCCAAG +
Preference number: 6 (lower is better)
Translates to: KDTLVRRFEWIS*STNSTTDTKSK
Trigger: CTTGGATTTAGTATCAGTGGTGGAATTAGTGGACAAGGAAATCCATTCAAACCTTCTGACAAGGGTATCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 90 bp CTTAGTTTCTGCATCTGTCCAATCTCTTCAGGAAGAAATTCTAATTaGTTGGAGCGTAGAGACATGACTGTTACATTCTTACAACTTCCA +
Preference number: 6 (lower is better)
Translates to: LSFCICPISSGRNSN*LERRDMTVTFLQLP
Trigger: TGGAAGTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATTTCTTCCTGAAGAGATTGGACAGATGCAGAAACTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp CAGGAAGAAATTCTAATTTGTTGGAGCGTAGAGACATaGCTGTTACATTCTTACAACTTCCAATTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: QEEILICWSVET*LLHSYNFQFLW
Trigger: CCAGAGAAATTGGAAGTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATTTCTTCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS TCA 72 bp ACTCTGGATCTTCAGATGTTTGGTAGAGTTTTCAAGTaGTTTTCTCTTAACTCCAAGATCCGCAATTTGACA +
Preference number: 6 (lower is better)
Translates to: TLDLQMFGRVFK*FSLNSKIRNLT
Trigger: TGTCAAATTGCGGATCTTGGAGTTAAGAGAAAATCACTTGAAAACTCTACCAAACATCTGAAGATCCAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370958.5
CDS CAA 90 bp AGTTTCTGCATCTGTCCAATCTCTTCAGGAAGAAATTCTAATTTGTaGGAGCGTAGAGACATGACTGTTACATTCTTACAACTTCCAATT +
Preference number: 6 (lower is better)
Translates to: SFCICPISSGRNSNL*ERRDMTVTFLQLPI
Trigger: AATTGGAAGTTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATTTCTTCCTGAAGAGATTGGACAGATGCAGAAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp ATCTGTCCAATCTCTTCAGGAAGAAATTCTAATTTGTaGGAGCGTAGAGACATGACTGTTACATTCTTACAA +
Preference number: 6 (lower is better)
Translates to: ICPISSGRNSNL*ERRDMTVTFLQ
Trigger: TTGTAAGAATGTAACAGTCATGTCTCTACGCTCCAACAAATTAGAATTTCTTCCTGAAGAGATTGGACAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS CAA 72 bp TTGTCAGAAAGCCACAAAGCTGCAAGCTCTTTAAGTTaGGTAAATGAGAATGGTAAATTCTTCAATCTGTTG +
Preference number: 6 (lower is better)
Translates to: LSESHKAASSLS*VNENGKFFNLL
Trigger: CAACAGATTGAAGAATTTACCATTCTCATTTACCAAACTTAAAGAGCTTGCAGCTTTGTGGCTTTCTGACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2
CDS GCA 72 bp AATCTGTTGTCACTCAAATTTAGGACTCTTAGTTTCTaGATCTGTCCAATCTCTTCAGGAAGAAATTCTAAT +
Preference number: 6 (lower is better)
Translates to: NLLSLKFRTLSF*ICPISSGRNSN
Trigger: ATTAGAATTTCTTCCTGAAGAGATTGGACAGATGCAGAAACTAAGAGTCCTAAATTTGAGTGACAACAGATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310961.9
ENST00000415775.2
ENST00000651217.1
ENST00000651989.2