RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC66 (Homo sapiens)

Ensembl gene IDs: ENSG00000188993

Ensembl transcript IDs: ENST00000343457.3, ENST00000682860.1

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTaGATCAGTGTCCACTTGGTTGGAATTCATGTTGTCTCCTTCAGG +
Preference number: 1 (lower is better)
Translates to: PSRIIALKWAHKTLI*ISVHLVGIHVVSFR
Trigger: CCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CCA 90 bp CCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTaGTTGGAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGC +
Preference number: 1 (lower is better)
Translates to: PSSGPTKPSFASVST*LEFMLSPSGSCCEG
Trigger: GCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CCA 90 bp CAAGTGTGTTTAGCTTATAACCCTTCTAGAATCATCGCCCTCAAGTaGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGA +
Preference number: 1 (lower is better)
Translates to: QVCLAYNPSRIIALK*AHKTLICISVHLVG
Trigger: TCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTATAAGCTAAACACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CCA 90 bp CAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTaGAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTA +
Preference number: 1 (lower is better)
Translates to: QVGPQNPHLHQCPLG*NSCCLLQDLVVKAL
Trigger: TAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR TCA 90 bp CTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTTaGGAAGGAAAGTTAGAACCACTTCGTCTAACTGCAACAGATTCT +
Preference number: 1 (lower is better)
Translates to: LFREPNPIRLLQVCI*EGKLEPLRLTATDS
Trigger: AGAATCTGTTGCAGTTAGACGAAGTGGTTCTAACTTTCCTTCTCAAATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR TCA 90 bp GAATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTaGACTGGTTTTGTTTGGAGCTCTTGTAATAATGGTGCATGGTTC +
Preference number: 1 (lower is better)
Translates to: EYLPQPIDEVLLCSQ*TGFVWSSCNNGAWF
Trigger: GAACCATGCACCATTATTACAAGAGCTCCAAACAAAACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR GCA 90 bp CCAGGTCTGTATTTGAGAAGGAAAGTTAGAACCACTTCGTCTAACTaGAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAA +
Preference number: 1 (lower is better)
Translates to: PGLYLRRKVRTTSSN*NRFSSEYLPQPIDE
Trigger: TTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGTGGTTCTAACTTTCCTTCTCAAATACAGACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CCA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAATCATCGCCCTCAAGTaGGCCCACAAAACCCTCATT +
Preference number: 2 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLIIALK*AHKTLI
Trigger: AATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGAT...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTaGGAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: SSGPTKPSFASVSTW*EFMLSPSGSCCEGF
Trigger: AAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 90 bp CCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTTaGTTTGGAGCTCTTGTAATAATGGTGCATGGTTCTTGGAATGAT +
Preference number: 2 (lower is better)
Translates to: PNLLMKCSCVLSELV*FGALVIMVHGSWND
Trigger: ATCATTCCAAGAACCATGCACCATTATTACAAGAGCTCCAAACAAAACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 90 bp TCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTaGAGAAGGAAAGTTAGAACCACTTCGTCTAACTGCAACAGATTC +
Preference number: 2 (lower is better)
Translates to: SFQRAKSHQIAPGLY*RRKVRTTSSNCNRF
Trigger: GAATCTGTTGCAGTTAGACGAAGTGGTTCTAACTTTCCTTCTCAAATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTCAGTGTCCACTTGGTTaGAATTCATGTTGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVQCPLG*NSCCLL
Trigger: AAGGAGACAACATGAATTCCAACCAAGTGGACACTG...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCGCATCAGTGTCCACTTaGTTGGAATTCATGTTGTCT +
Preference number: 2 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLASVST*LEFMLS
Trigger: AGACAACATGAATTCCAACCAAGTGGACACTGATGC...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR GCA 72 bp ATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTaGATCAGTGTCCACTTGGTTGGAATTCATGTTGTC +
Preference number: 3 (lower is better)
Translates to: IIALKWAHKTLI*ISVHLVGIHVV
Trigger: GACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CCA 72 bp CCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTaGAATTCATGTTGTCTCCTTCAGGATCTTGTTGTG +
Preference number: 3 (lower is better)
Translates to: PQNPHLHQCPLG*NSCCLLQDLVV
Trigger: CACAACAAGATCCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CAA 90 bp GTCTTTGTCATCCTAAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCAGTGTCCACTTGGTaGGAATTCATGTTGTCTCCT +
Preference number: 3 (lower is better)
Translates to: VFVILKLFFSESQIPSDCSVSTW*EFMLSP
Trigger: AGGAGACAACATGAATTCCAACCAAGTGGACACTGA...GCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTTAGGATGACAAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR GCA 72 bp TCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTaGTCCTGTGTTCTCAGTGAACTGGTTTTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: SLLNIYPNLLMK*SCVLSELVLFG
Trigger: TCCAAACAAAACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CAA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGGTTGGAATTCATGTaGTCTCCTTCAGGATCTTGT +
Preference number: 3 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLWLEFM*SPSGSC
Trigger: ACAAGATCCTGAAGGAGACAACATGAATTCCAACCA...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR-3UTR CAA 90 bp ACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTATTTACCCCAACCTATaGATGAAGTGCTCCTGTGTT +
Preference number: 3 (lower is better)
Translates to: TISLQKVVLVCVQNSLKSIYPNL*MKCSCV
Trigger: AACACAGGAGCACTTCATCAATAGGTTGGGGTAAAT...AGATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR GCA 72 bp TATTTGAGAAGGAAAGTTAGAACCACTTCGTCTAACTaGAACAGATTCTCTTCTGAATATTTACCCCAACCT +
Preference number: 3 (lower is better)
Translates to: YLRRKVRTTSSN*NRFSSEYLPQP
Trigger: AGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGTGGTTCTAACTTTCCTTCTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CCA 72 bp TTGTTTGGAGCTCTTGTAATAATGGTGCATGGTTCTTaGAATGATCTCAAAATATTCCCCTCTTTCTCTTTC +
Preference number: 3 (lower is better)
Translates to: LFGALVIMVHGS*NDLKIFPSFSF
Trigger: GAAAGAGAAAGAGGGGAATATTTTGAGATCATTCCAAGAACCATGCACCATTATTACAAGAGCTCCAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTCCTGCTCTGGGGAGTaGCCCCGTTGGCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCSCSGE*PRWPPH
Trigger: GTGAGGAGGCCAACGGGGGCACTCCCCAGAGCAGGA...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCCCTGAGCTCTCGTCCTaGAGGGACTCCTCATCAGGC +
Preference number: 4 (lower is better)
Translates to: LESSPSSGPTKPSFASVSPELSS*RDSSSG
Trigger: GCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGG...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCGAGCCAGAGACAGCGTaGGACGTGCCAGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: LESSPSSGPTKPSFASVSEPETA*DVPATE
Trigger: TTCTGTAGCTGGCACGTCTCACGCTGTCTCTGGCTC...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCCCACTGAATGTGCACTaGGAGGCTCTTCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICIPLNVH*EALPGP
Trigger: TGGCCCAGGAAGAGCCTCTCAGTGCACATTCAGTGG...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCTTTCCCTGGAAATCCTaGTCTGGGGAGTGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFFPWKS*SGECPR
Trigger: ACGGGGGCACTCCCCAGAGCAGGATTTCCAGGGAAA...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCCTCCTCATCAGGCACTaGCTCTTCAGTCTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LESSPSSGPTKPSFASVSLLIRH*LFSLAP
Trigger: AGGAGCAAGACTGAAGAGGCAGTGCCTGATGAGGAG...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTGAATGTGATGAACACTaGCAGGCACACCGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCECDEH*QAHRQS
Trigger: GCTCTGGCGGTGTGCCTGTCAGTGTTCATCACATTC...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCTCTTGGAGGAAAGACTaGTGGGCCTGTGTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICISWRKD*WACVSW
Trigger: CCAAGAGACACAGGCCCATCAGTCTTTCCTCCAAGA...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAACAAGTGTGTTTGTCCTTGCTTGCCCCTaGGCTCTCGTCCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFHTEEQVHPHRMLTSVFVLACP*ALVLQG
Trigger: TCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGAC...AAACACACTTGTTAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTTCATGCGATGCAGATaGATGGGAGGAAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCFMRCR*MGGRRV
Trigger: AACCCGCCTTCCTCCCATTCATCTGCATCGCATGAA...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTCTTTGTCATCCTAAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCCTCGCTGTAGTGGGCTaGAAGCGCTTCCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VFVILKLFFSESQIPSDCLAVVG*KRFLSP
Trigger: AGGGCTGAGGAAGCGCTTTCAGCCCACTACAGCGAG...GCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTTAGGATGACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCGCTCCTTGCACTCTCTaGACTTATGGAGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICIAPCTL*TYGAQS
Trigger: ACTCTGAGCTCCATAAGTTCAGAGAGTGCAAGGAGC...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCCCGGACAGCCTTGGCTaGTGTATGCTCAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFPDSLG*CMLSKS
Trigger: TGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGG...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp CTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAACAAGTGTGTTTATGGGTCTCTGGGTGTaGTGTGTGCCCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LFHTEEQVHPHRMLTSVFMGLWV*CVPRSF
Trigger: GAAGCTGCGGGGCACACACCACACCCAGAGACCCAT...AAACACACTTGTTAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCAAATACTTGGCGCAGATaGGTCTCTGGGTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ITLLESSPSSGPTKPSFANTWRR*VSGCGV
Trigger: CACACCACACCCAGAGACCCATCTGCGCCAAGTATT...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp GTCTTTGTCATCCTAAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTATTCCCTGGTGACCTaGGCCAGGGTGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFVILKLFFSESQIPSDCYSLVT*ARVTGP
Trigger: AGGGCCTGTCACCCTGGCCCAGGTCACCAGGGAATA...GCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTTAGGATGACAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCATCATCGCCCTCAAGTaGGCCCACAAAACCCTCATT +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICIIIALK*AHKTLI
Trigger: AATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGAT...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTGTCTCTGCTTCTTCCTaGGACCAGAGCCGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KAVLFREPNPIRLLQVCIVSASS*DQSRPL
Trigger: CAAAGGCCGGCTCTGGTCTCAGGAAGAAGCAGAGAC...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTGGAATCATAACGGCTTaGGCCAGAGACAGCGTGAGA +
Preference number: 4 (lower is better)
Translates to: GPQNPHLHQCPLGWNSCCGIITA*ARDSVR
Trigger: TCTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCC...ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTCGCTTCCTCAGCCCTTaGCCCGGACAGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TISLQKVVLVCVQNSLKSRFLSP*PGQPWL
Trigger: CAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCG...AGATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCTCTCTAAGTGAGCAATaGCATTCTGCTGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LESSPSSGPTKPSFASVSSLSEQ*HSAALD
Trigger: ATCCAAGGCAGCAGAATGGCATTGCTCACTTAGAGA...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCCTGGAAATCCTGCTCTaGGGAGTGCCCCCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLLEILL*GVPPLA
Trigger: GGCCAACGGGGGCACTCCCCAGAGCAGGATTTCCAG...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGCGCAGATGGGTCTCTaGGTGTGGTGTGTGCCCCGC +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDAQMGL*VWCVPR
Trigger: GCGGGGCACACACCACACCCAGAGACCCATCTGCGC...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCACGGTTACCGGCATGTaGATGTCTCTGGAGAATGGA +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFTVTGM*MSLENG
Trigger: TCCATTCTCCAGAGACATCCACATGCCGGTAACCGT...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTATCTTGGGTCACCGTATaGAACCTCGCTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLSWVTV*NLAVVG
Trigger: GCCCACTACAGCGAGGTTCCATACGGTGACCCAAGA...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCCTGCTTTGCTCCTTATaGGGCTTTTCATGCGATGCA +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFLLCSL*GFSCDA
Trigger: TGCATCGCATGAAAAGCCTCATAAGGAGCAAAGCAG...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTCTTTGTCATCCTAAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCGTAGAAGCCCTCGTTTaGATACGCGTTGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VFVILKLFFSESQIPSDCVEALV*IRVVQA
Trigger: GGCCTGGACAACGCGTATTCAAACGAGGGCTTCTAC...GCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTTAGGATGACAAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTCTTTCTCTTTCACACTaGAGAGCAGGTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCLSLSH*RAGSSP
Trigger: TGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAG...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCGTAGAAATGCCCGTGTaGCTTCCTCCCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: HDQPPKSCASVCSEFIKIVEMPV*LPPWGL
Trigger: GAGGCCCCAGGGAGGAAGGCACACGGGCATTTCTAC...GATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTCTTGGCAGCCGTCTCTaGTTCTTCCTGAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: KAVLFREPNPIRLLQVCILGSRL*FFLRPE
Trigger: CTCTGGTCTCAGGAAGAAGCAGAGACGGCTGCCAAG...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTCTGGGCTCTGCGAACTaGCAGGATCCTTTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVLGSAN*QDPFCS
Trigger: GGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAG...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTATATCAGGAATTACGGTaGCGTGTGGGTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLYQELR*RVGVAV
Trigger: CACAGCCACACCCACACGCCACCGTAATTCCTGATA...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTTGGGCCTGTGTCTCTTaGGTCACCGTATGGAACCTC +
Preference number: 4 (lower is better)
Translates to: KAVLFREPNPIRLLQVCIWACVS*VTVWNL
Trigger: GAGGTTCCATACGGTGACCCAAGAGACACAGGCCCA...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTATGGAAACCTGTTTCTaGAGCTGCTTCTGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: GPQNPHLHQCPLGWNSCCMETCF*SCFCGV
Trigger: AACGCCACAGAAGCAGCTTCAGAAACAGGTTTCCAT...ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTATCCAAACTCTGCAATaGCTTCAGTTTCCACAGTCC +
Preference number: 4 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCIQTLQ*LQFPQS
Trigger: GGACTGTGGAAACTGAAGTCATTGCAGAGTTTGGAT...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTAATTACGGTGGCGTGTaGGTGTGGCTGTGTCACCCA +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVNYGGV*VWLCHP
Trigger: TGGGTGACACAGCCACACCCACACGCCACCGTAATT...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 72 bp AATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTaGCATCAGTGTCCACTTGGTTGGAATTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: NHRPQVGPQNPH*HQCPLGWNSCC
Trigger: ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCCTGAGTTTATTTCTTTaGAGAATGAGCACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICILSLFL*RMSTFS
Trigger: GCTGAAGGTGCTCATTCTTCAAAGAAATAAACTCAG...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCAGTCTGGAGCAGAAATaGGAGGTTTTTCAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFSLEQK*EVFQRD
Trigger: ATCCCTTTGAAAAACCTCTCATTTCTGCTCCAGACT...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCGCATGGTTCTTGGAATaGTCTCAAAATATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFAWFLE*SQNIPL
Trigger: GAGGGGAATATTTTGAGATCATTCCAAGAACCATGC...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTCCCTGGGGCCTCTCTaGTTTGCTCCTTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: HDQPPKSCASVCSEFIKISLGPL*FAPYEA
Trigger: AGCCTCATAAGGAGCAAAGCAGAGAGGCCCCAGGGA...GATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCATCATTTCCACTTCCTaGCCCGGTGTTGTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLIISTS*PGVVPA
Trigger: TGCGGGGACAACACCGGGGCAGGAAGTGGAAATGAT...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTACTATGGATGTGGTCCTaGGCTGCTGACATTAGTTCA +
Preference number: 4 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLLWMWS*AADISS
Trigger: TGAACTAATGTCAGCAGCGCAGGACCACATCCATAG...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCAAAAGTGACTGTTCAGTaGCCCCTCTTTCCTTACTAT +
Preference number: 4 (lower is better)
Translates to: ITLLESSPSSGPTKPSFAKVTVQ*PLFPYY
Trigger: ATAGTAAGGAAAGAGGGGGCACTGAACAGTCACTTT...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCTTAGAAAATTCCATCTaGGAGTCCCAAAGTGACTGT +
Preference number: 4 (lower is better)
Translates to: NPSRIIALKWAHKTLICILENSI*ESQSDC
Trigger: ACAGTCACTTTGGGACTCGCAGATGGAATTTTCTAA...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGCTGCCTCTTCAGTCTTaGTCCTTGCACTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLLPLQS*SLHSLN
Trigger: GTTCAGAGAGTGCAAGGAGCAAGACTGAAGAGGCAG...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTCTGAAGCTGCTTCTGTaGCGTTTCACCCATGAGGAC +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVLKLLL*RFTHED
Trigger: GTCCTCATGGGTGAAACGCCACAGAAGCAGCTTCAG...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGGCGGGTTTCCCTaGAAATCCTGCTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDEGGFP*KSCSGE
Trigger: CTCCCCAGAGCAGGATTTCCAGGGAAACCCGCCTTC...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGGTGGCGTGTGGGTGTaGCTGTGTCACCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFGGVWV*LCHPER
Trigger: CCTTTCTGGGTGACACAGCCACACCCACACGCCACC...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp GGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTAGAATATCATTCCTATaGATGTGGTCCTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPQNPHLHQCPLGWNSCCRISFL*MWSCAA
Trigger: AGCAGCGCAGGACCACATCCATAGGAATGATATTCT...ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAACAAGTGTGTTTAGTGGCTGCTGTCTGTaGTATGTCCACAGGTATATC +
Preference number: 4 (lower is better)
Translates to: LFHTEEQVHPHRMLTSVFSGCCL*YVHRYI
Trigger: GATATACCTGTGGACATATCACAGACAGCAGCCACT...AAACACACTTGTTAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCACAATATCCCATTGAATaGCAGATCCAAACTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ITLLESSPSSGPTKPSFAQYPIE*QIQTLQ
Trigger: TTGCAGAGTTTGGATCTGTCATTCAATGGGATATTG...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp ACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTAGAAGAGACGCCCACTaGATGTGCACTGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TISLQKVVLVCVQNSLKSRRDAH*MCTERL
Trigger: GAGCCTCTCAGTGCACATTCAGTGGGCGTCTCTTCT...AGATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTGCGAGTCCCAAAGTaGCTGTTCAGTGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVLRVPK*LFSAPS
Trigger: AGAGGGGGCACTGAACAGTCACTTTGGGACTCGCAG...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATTTTTTGCCGGCAGCCTaGACATCGCGGGTGCTTCTA +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDFLPAA*TSRVLL
Trigger: TAGAAGCACCCGCGATGTGCAGGCTGCCGGCAAAAA...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATAGACAGCGTGAGACGTaGCAGCTACAGAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDRQRET*QLQKRR
Trigger: GCGTCTCTTCTGTAGCTGGCACGTCTCACGCTGTCT...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTCCGTCACATTGTCCTTaGTTGCCCCTGAGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLPSHCP*LPLSSR
Trigger: ACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGG...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCAACCTATTGATGAAGTaGTCCTGTGTTCTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFNLLMK*SCVLSE
Trigger: TTCACTGAGAACACAGGAGCACTTCATCAATAGGTT...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTTCCAATGAGAGGGAGTaGATGGCATTGTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVSNERE*MALLLR
Trigger: CCTCAGCAACAATGCCATCCACTCCCTCTCATTGGA...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTTGCGATGCAGATGAATaGGAGGAAGGCGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: TISLQKVVLVCVQNSLKSCDADE*EEGGFP
Trigger: GGGAAACCCGCCTTCCTCCCATTCATCTGCATCGCA...AGATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATGCTCAGCAAATCAATaGATGAACTCACTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ITLLESSPSSGPTKPSFACSANQ*MNSLAF
Trigger: AAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCA...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTTGCCCCGGACAGCCTTaGCTGCTGTATGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFCPGQP*LLYAQQ
Trigger: TTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCA...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 72 bp CCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTaGGAATTCATGTTGTCTCCTTCAGGATCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTKPSFASVSTW*EFMLSPSGSCC
Trigger: ACAACAAGATCCTGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 72 bp AGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTaGAGAAGGAAAGTTAGAACCACTTCGTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: RAKSHQIAPGLY*RRKVRTTSSNC
Trigger: GCAGTTAGACGAAGTGGTTCTAACTTTCCTTCTCAAATACAGACCTGGAGCAATCTGATGGGATTTGGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCACTTGTGGGGGAATTTTaGATATCTTGTTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QVGPQNPHLHQCPLGWNSLVGEF*ISCCSL
Trigger: TAAAGAGCAACAAGATATTCAAAATTCCCCCACAAG...TGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTGAGGCATTTTCCAGATaGGTCTTGTACATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVEAFSR*VLYMPE
Trigger: CTCTGGCATGTACAAGACTCATCTGGAAAATGCCTC...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp GGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTGTCCTTGAAGGCTTGTaGGGGAATTTTGAATATCTT +
Preference number: 4 (lower is better)
Translates to: GPQNPHLHQCPLGWNSCCVLEGL*GNFEYL
Trigger: AAGATATTCAAAATTCCCCCACAAGCCTTCAAGGAC...ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGAAGTGTCAGAAGGAGTaGATTTCTGCACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLKCQKE*ISALVP
Trigger: AGGAACCAGTGCAGAAATCCACTCCTTCTGACACTT...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTAGTTGCAGGCAGTTGTaGAAATCAGACCACCCTATT +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVSCRQL*KSDHPI
Trigger: AATAGGGTGGTCTGATTTTCACAACTGCCTGCAACT...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAACAAGTGTGTTTCAGCAAATCAATGGATaGACTCACTTGCCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFHTEEQVHPHRMLTSVFQQING*THLPFL
Trigger: AAGGAAAGGCAAGTGAGTTCATCCATTGATTTGCTG...AAACACACTTGTTAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCCTCCTGTGTTCTCAGTaGACTGGTTTTGTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HDQPPKSCASVCSEFIKILLCSQ*TGFVWS
Trigger: GCTCCAAACAAAACCAGTTCACTGAGAACACAGGAG...GATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCGCAATGCCATTCTGCTaGCTTGGATTGAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLAMPFC*LGLKSC
Trigger: ACAGCTCTTCAATCCAAGGCAGCAGAATGGCATTGC...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAGAACATGGTGGTGTTTaGTGTAAAACGTCCACATTT +
Preference number: 4 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLEHGGV*CKTSTF
Trigger: AAATGTGGACGTTTTACAGCAAACACCACCATGTTC...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCTCATTCCTATGGATGTaGTCCTGCGCTGCTGACATT +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLSFLWM*SCAADI
Trigger: AATGTCAGCAGCGCAGGACCACATCCATAGGAATGA...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCGCCATTCTGCTGCCTTaGATTGAAGAGCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLAILLP*IEELCH
Trigger: ATGACACAGCTCTTCAATCCAAGGCAGCAGAATGGC...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp GTCTTTGTCATCCTAAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCCAGTGTCCACTTGGTTaGAATTCATGTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VFVILKLFFSESQIPSDCQCPLG*NSCCLL
Trigger: AAGGAGACAACATGAATTCCAACCAAGTGGACACTG...GCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTTAGGATGACAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTCTCCTTCAGCATCAGTGTCCACTTaGTTGGAATTCATGTTGTCT +
Preference number: 4 (lower is better)
Translates to: KPSFASVSTWLEFMLSPSASVST*LEFMLS
Trigger: AGACAACATGAATTCCAACCAAGTGGACACTGATGC...TGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp TCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGGTGCATGGTTCTTaGAATGATCTCAAAATATTC +
Preference number: 4 (lower is better)
Translates to: SSGPTKPSFASVSTWLEFMVHGS*NDLKIF
Trigger: GAATATTTTGAGATCATTCCAAGAACCATGCACCAT...GAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
3UTR CAA 72 bp TTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTTaGTTTGGAGCTCTTGTAATAATGGTGCATGGTTCT +
Preference number: 4 (lower is better)
Translates to: LMKCSCVLSELV*FGALVIMVHGS
Trigger: AGAACCATGCACCATTATTACAAGAGCTCCAAACAAAACCAGTTCACTGAGAACACAGGAGCACTTCATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGCCTTGGGAGTGTCACTaGGTTTATTTCTTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLPWECH*VYFFEE
Trigger: TTCTTCAAAGAAATAAACTCAGTGACACTCCCAAGG...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGTCAGACCACCCTATTTaGAATATCCCATTGAATGAC +
Preference number: 4 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLSDHPI*NIPLND
Trigger: GTCATTCAATGGGATATTGCAAATAGGGTGGTCTGA...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AATATTTACCCCAACCTATTGATGAAGTGCTCCTGTGTTCTCAGTGAACTGGTTGAGAATGGAATAGACTaGACCATCATTTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: NIYPNLLMKCSCVLSELVENGID*TIISTS
Trigger: GGAAGTGGAAATGATGGTGCAGTCTATTCCATTCTC...AACCAGTTCACTGAGAACACAGGAGCACTTCATCAATAGGTTGGGGTAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTGAACTTTTCCAATTTTaGAGTTTCACGATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KAVLFREPNPIRLLQVCIELFQF*SFTISL
Trigger: GAGGCTGATCGTGAAACTGCAAAATTGGAAAAGTTC...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTGGATGGCATTGTTGCTaGGGTTTAACACTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLGWHCC*GLTLPK
Trigger: CTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCC...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTAGCCTTATCAGGATCTaGGGGAACTTCAGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFSLIRI*GNFSRT
Trigger: TGTTCTGCTGAAGTTCCCTCAGATCCTGATAAGGCT...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCCAAATCCCATCAGATTaGTCCAGGTCTGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: HDQPPKSCASVCSEFIKIQIPSD*SRSVFE
Trigger: CTCAAATACAGACCTGGAGCAATCTGATGGGATTTG...GATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTGAGCACCTTCAGCAATaGAAACCTGTTTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLEHLQQ*KPVSEA
Trigger: AGCTTCAGAAACAGGTTTCCATTGCTGAAGGTGCTC...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGAAGGAGTGGATTTCTaGACTGGTTCCTTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFEGVDF*TGSLLA
Trigger: TGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTC...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTCACAAAACCCTCATTTaGATCAGTGTCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLHKTLI*ISVHLV
Trigger: AACCAAGTGGACACTGATGCAAATGAGGGTTTTGTG...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCAAGTCAACCACTAGATaGGGAAATTCTAGAGCTATG +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLKSTTR*GNSRAM
Trigger: CATAGCTCTAGAATTTCCCCATCTAGTGGTTGACTT...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCTATTTCTTTGAAGAATaGGCACCTTCAGCAATGGAA +
Preference number: 4 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLYFFEE*APSAME
Trigger: TTCCATTGCTGAAGGTGCTCATTCTTCAAAGAAATA...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGTCATAATCATAAGTaGACATGCCCGGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLCHNHK*TCPETH
Trigger: ATGAGTTTCCGGGCATGTTCACTTATGATTATGACA...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGACAGATCCAAACTCTaGAATGACTTCAGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFDRSKL*NDFSFH
Trigger: GTGGAAACTGAAGTCATTGCAGAGTTTGGATCTGTC...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCTACCACTTCGTCTAACTaGAACAGATTCTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TISLQKVVLVCVQNSLKSTTSSN*NRFSSE
Trigger: TTCAGAAGAGAATCTGTTGCAGTTAGACGAAGTGGT...AGATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CCA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTAAGGGTCTAATTCATTaGAATCATAACGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLKGLIH*NHNGLS
Trigger: GCTCAAGCCGTTATGATTCCAATGAATTAGACCCTT...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATTTTGCAATATCCCATTaGATGACAGATCCAAACTCT +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDFAISH*MTDPNS
Trigger: AGAGTTTGGATCTGTCATTCAATGGGATATTGCAAA...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR TCA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTGAAATTCTAGAGCTATaGTCATCATTGGTAGGATGG +
Preference number: 4 (lower is better)
Translates to: SLMIKLNILVFVILKLFFEILEL*SSLVGW
Trigger: CCATCCTACCAATGATGATCATAGCTCTAGAATTTC...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATATGGATGAACTCACTTaGCTTTCCTTAGAAAATTCC +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDMDELT*LSLENS
Trigger: GGAATTTTCTAAGGAAAGGCAAGTGAGTTCATCCAT...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGATCTTCTTGATTCTTaGATTTCCCTGGAATTGTTT +
Preference number: 4 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDDLLDS*ISLELF
Trigger: AAACAATTCCAGGGAAATGCAAGAATCAAGAAGATC...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR GCA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTAAAATTTTGAAAGACTaGCACACTATCATCACACTG +
Preference number: 4 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVKILKD*HTIITL
Trigger: CAGTGTGATGATAGTGTGGCAGTCTTTCAAAATTTT...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp GCCTGTGTCTCTTGGGTCACCGTATGGAACCTCGCTGTAGTGGGCTaGAAGCGCTTCCTCAGCCCTTGCCCCGGACAGCCTTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ACVSWVTVWNLAVVG*KRFLSPCPGQPWLL
Trigger: CAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCTTTCAGCCCACTACAGCGAGGTTCCATACGGTGACCCAAGAGACACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp CCTTGGCAGCCGTCTCTGCTTCTTCCTGAGACCAGAGCCGGCCTTTaGCTTCTTCCCCAGAGTAGAAATGCCCGTGTGCCTTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: PWQPSLLLPETRAGL*LLPQSRNARVPSSL
Trigger: CAGGGAGGAAGGCACACGGGCATTTCTACTCTGGGGAAGAAGGCAAAGGCCGGCTCTGGTCTCAGGAAGAAGCAGAGACGGCTGCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp GCCTGCACATCGCGGGTGCTTCTAACACTCCTTGGCAGCCGTCTCTaGTTCTTCCTGAGACCAGAGCCGGCCTTTGCCTTCTTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: ACTSRVLLTLLGSRL*FFLRPEPAFAFFPR
Trigger: TCTGGGGAAGAAGGCAAAGGCCGGCTCTGGTCTCAGGAAGAAGCAGAGACGGCTGCCAAGGAGTGTTAGAAGCACCCGCGATGTGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp CCAGAGCCGGCCTTTGCCTTCTTCCCCAGAGTAGAAATGCCCGTGTaGCTTCCTCCCTGGGGCCTCTCTGCTTTGCTCCTTATGAGGCTT +
Preference number: 5 (lower is better)
Translates to: PEPAFAFFPRVEMPV*LPPWGLSALLLMRL
Trigger: AAGCCTCATAAGGAGCAAAGCAGAGAGGCCCCAGGGAGGAAGGCACACGGGCATTTCTACTCTGGGGAAGAAGGCAAAGGCCGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp ACCATCATTTCCACTTCCTGCCCCGGTGTTGTCCCCGCACTGTCCTaGGCTCTGCGAACTGCCAGGATCCTTTCTGCTCCTTCCCAGAGT +
Preference number: 5 (lower is better)
Translates to: TIISTSCPGVVPALS*ALRTARILSAPSQS
Trigger: ACTCTGGGAAGGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAATGATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp TTTCCACTTCCTGCCCCGGTGTTGTCCCCGCACTGTCCTGGGCTCTaGGAACTGCCAGGATCCTTTCTGCTCCTTCCCAGAGTTCTATCA +
Preference number: 5 (lower is better)
Translates to: FPLPAPVLSPHCPGL*ELPGSFLLLPRVLS
Trigger: TGATAGAACTCTGGGAAGGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCCTTCCTGCCCCGGTGTaGTCCCCGCACTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: NPSRIIALKWAHKTLICILPAPV*SPHCPG
Trigger: CCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAG...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp TTCCTCAAGACTGTCTACAGCCGTCACATTGTCCTTGCTTGCCCCTaGGCTCTCGTCCTGCAGGGACTCCTCATCAGGCACTGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FLKTVYSRHIVLACP*ALVLQGLLIRHCLF
Trigger: GAAGAGGCAGTGCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp ATGTCTCTGGAGAATGGAATAGACTGCACCATCATTTCCACTTCCTaGCCCGGTGTTGTCCCCGCACTGTCCTGGGCTCTGCGAACTGCC +
Preference number: 5 (lower is better)
Translates to: MSLENGIDCTIISTS*PGVVPALSWALRTA
Trigger: GGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAATGATGGTGCAGTCTATTCCATTCTCCAGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp TCTACAGCCGTCACATTGTCCTTGCTTGCCCCTGAGCTCTCGTCCTaGAGGGACTCCTCATCAGGCACTGCCTCTTCAGTCTTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: STAVTLSLLAPELSS*RDSSSGTASSVLLL
Trigger: AAGGAGCAAGACTGAAGAGGCAGTGCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp ACATGCCCGGAAACTCATCCCCTAAGGGACTATTCCCTGGTGACCTaGGCCAGGGTGACAGGCCCTCAGATCTATCAGTGTCAGAGGCAT +
Preference number: 5 (lower is better)
Translates to: TCPETHPLRDYSLVT*ARVTGPQIYQCQRH
Trigger: ATGCCTCTGACACTGATAGATCTGAGGGCCTGTCACCCTGGCCCAGGTCACCAGGGAATAGTCCCTTAGGGGATGAGTTTCCGGGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 90 bp GCCAGAGACAGCGTGAGACGTGCCAGCTACAGAAGAGACGCCCACTaGATGTGCACTGAGAGGCTCTTCCTGGGCCACAGTTTCATAAGT +
Preference number: 5 (lower is better)
Translates to: ARDSVRRASYRRDAH*MCTERLFLGHSFIS
Trigger: ACTTATGAAACTGTGGCCCAGGAAGAGCCTCTCAGTGCACATTCAGTGGGCGTCTCTTCTGTAGCTGGCACGTCTCACGCTGTCTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 90 bp AGCAGGAGTGACATCCAGGCCACTGTCCCATCTTGGAGGAAAGACTaGTGGGCCTGTGTCTCTTGGGTCACCGTATGGAACCTCGCTGTA +
Preference number: 5 (lower is better)
Translates to: SRSDIQATVPSWRKD*WACVSWVTVWNLAV
Trigger: TACAGCGAGGTTCCATACGGTGACCCAAGAGACACAGGCCCATCAGTCTTTCCTCCAAGATGGGACAGTGGCCTGGATGTCACTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp TGGGCTGAAAGCGCTTCCTCAGCCCTTGCCCCGGACAGCCTTGGCTaGTGTATGCTCAGCAAATCAATGGATGAACTCACTTGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: WAESASSALAPDSLG*CMLSKSMDELTCLS
Trigger: GGAAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCTTTCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 90 bp TGGTGTGTGCCCCGCAGCTTCCATGTCATCGTAGAAGCCCTCGTTTaGATACGCGTTGTCCAGGCCAGGGCTTTTGCTCTGGCACTTTTT +
Preference number: 5 (lower is better)
Translates to: WCVPRSFHVIVEALV*IRVVQARAFALALF
Trigger: AAAAAGTGCCAGAGCAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGAGGGCTTCTACGATGACATGGAAGCTGCGGGGCACACACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 90 bp CGTGAGACGTGCCAGCTACAGAAGAGACGCCCACTGAATGTGCACTaGGAGGCTCTTCCTGGGCCACAGTTTCATAAGTCCATTCTCCGA +
Preference number: 5 (lower is better)
Translates to: RETCQLQKRRPLNVH*EALPGPQFHKSILR
Trigger: TCGGAGAATGGACTTATGAAACTGTGGCCCAGGAAGAGCCTCTCAGTGCACATTCAGTGGGCGTCTCTTCTGTAGCTGGCACGTCTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp TTCACGGTTACCGGCATGTGGATGTCTCTGGAGAATGGAATAGACTaGACCATCATTTCCACTTCCTGCCCCGGTGTTGTCCCCGCACTG +
Preference number: 5 (lower is better)
Translates to: FTVTGMWMSLENGID*TIISTSCPGVVPAL
Trigger: CAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAATGATGGTGCAGTCTATTCCATTCTCCAGAGACATCCACATGCCGGTAACCGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp TTTGCCTTCTTCCCCAGAGTAGAAATGCCCGTGTGCCTTCCTCCCTaGGGCCTCTCTGCTTTGCTCCTTATGAGGCTTTTCATGCGATGC +
Preference number: 5 (lower is better)
Translates to: FAFFPRVEMPVCLPP*GLSALLLMRLFMRC
Trigger: GCATCGCATGAAAAGCCTCATAAGGAGCAAAGCAGAGAGGCCCCAGGGAGGAAGGCACACGGGCATTTCTACTCTGGGGAAGAAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp CTTTCTGCTCCTTCCCAGAGTTCTATCAGGAATTACGGTGGCGTGTaGGTGTGGCTGTGTCACCCAGAAAGGGGTCTGGTTCTCGTAGAG +
Preference number: 5 (lower is better)
Translates to: LSAPSQSSIRNYGGV*VWLCHPERGLVLVE
Trigger: CTCTACGAGAACCAGACCCCTTTCTGGGTGACACAGCCACACCCACACGCCACCGTAATTCCTGATAGAACTCTGGGAAGGAGCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp CAGGATCCTTTCTGCTCCTTCCCAGAGTTCTATCAGGAATTACGGTaGCGTGTGGGTGTGGCTGTGTCACCCAGAAAGGGGTCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QDPFCSFPEFYQELR*RVGVAVSPRKGSGS
Trigger: AGAACCAGACCCCTTTCTGGGTGACACAGCCACACCCACACGCCACCGTAATTCCTGATAGAACTCTGGGAAGGAGCAGAAAGGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCAGGAGCGTCCTCTTTTTaGCCGGCAGCCTGCACATCG +
Preference number: 5 (lower is better)
Translates to: ITLLESSPSSGPTKPSFAGASSF*PAACTS
Trigger: CGATGTGCAGGCTGCCGGCAAAAAAGAGGACGCTCC...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp CTCCTCATCAGGCACTGCCTCTTCAGTCTTGCTCCTTGCACTCTCTaGACTTATGGAGCTCAGAGTGAACAGAGACCCCTCATCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LLIRHCLFSLAPCTL*TYGAQSEQRPLIRV
Trigger: GACTCTGATGAGGGGTCTCTGTTCACTCTGAGCTCCATAAGTTCAGAGAGTGCAAGGAGCAAGACTGAAGAGGCAGTGCCTGATGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp CAGTCACTCTCCAACTCACAGCAAGTGTCAGAAGGAGTGGATTTCTaGACTGGTTCCTTGTTAGCAGGAGTGACATCCAGGCCACTGTCC +
Preference number: 5 (lower is better)
Translates to: QSLSNSQQVSEGVDF*TGSLLAGVTSRPLS
Trigger: GGACAGTGGCCTGGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTCTGACACTTGCTGTGAGTTGGAGAGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp AGAGGGAAGCTGTTATTTCTCCGGAGAGGGAAGGGTCTAATTCATTaGAATCATAACGGCTTGAGCCAGAGACAGCGTGAGACGTGCCAG +
Preference number: 5 (lower is better)
Translates to: RGKLLFLRRGKGLIH*NHNGLSQRQRETCQ
Trigger: CTGGCACGTCTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCAATGAATTAGACCCTTCCCTCTCCGGAGAAATAACAGCTTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 90 bp ACTCTCCAACTCACAGCAAGTGTCAGAAGGAGTGGATTTCTGCACTaGTTCCTTGTTAGCAGGAGTGACATCCAGGCCACTGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: TLQLTASVRRSGFLH*FLVSRSDIQATVPS
Trigger: AGATGGGACAGTGGCCTGGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTCTGACACTTGCTGTGAGTTGGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTATGGGCCTGTGTCTCTaGGGTCACCGTATGGAACCT +
Preference number: 5 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCMGLCL*GHRMEP
Trigger: AGGTTCCATACGGTGACCCAAGAGACACAGGCCCAT...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp TGCCCCGGACAGCCTTGGCTGCTGTATGCTCAGCAAATCAATGGATaGACTCACTTGCCTTTCCTTAGAAAATTCCATCTGCGAGTCCCA +
Preference number: 5 (lower is better)
Translates to: CPGQPWLLYAQQING*THLPFLRKFHLRVP
Trigger: TGGGACTCGCAGATGGAATTTTCTAAGGAAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 90 bp CTTCAGTCTTGCTCCTTGCACTCTCTGAACTTATGGAGCTCAGAGTaGACAGAGACCCCTCATCAGAGTCACAGTCACTCTCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: LQSCSLHSLNLWSSE*TETPHQSHSHSPTH
Trigger: GTGAGTTGGAGAGTGACTGTGACTCTGATGAGGGGTCTCTGTTCACTCTGAGCTCCATAAGTTCAGAGAGTGCAAGGAGCAAGACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGGAATCATAACGGCTaGAGCCAGAGACAGCGTGAG +
Preference number: 5 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCWNHNG*SQRQRE
Trigger: CTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCA...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp GCCATTCTGCTGCCTTGGATTGAAGAGCTGTGTCATAATCATAAGTaGACATGCCCGGAAACTCATCCCCTAAGGGACTATTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: AILLPWIEELCHNHK*TCPETHPLRDYSLV
Trigger: CACCAGGGAATAGTCCCTTAGGGGATGAGTTTCCGGGCATGTTCACTTATGATTATGACACAGCTCTTCAATCCAAGGCAGCAGAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCGAGTGGATGGCATTGTaGCTGAGGTTTAACACTTCC +
Preference number: 5 (lower is better)
Translates to: NPSRIIALKWAHKTLICIEWMAL*LRFNTS
Trigger: GGAAGTGTTAAACCTCAGCAACAATGCCATCCACTC...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTGGCCACTGTCCCATCTaGGAGGAAAGACTGATGGGC +
Preference number: 5 (lower is better)
Translates to: KAVLFREPNPIRLLQVCIGHCPI*EERLMG
Trigger: GCCCATCAGTCTTTCCTCCAAGATGGGACAGTGGCC...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCTTCTGCTGCCTTGGATaGAAGAGCTGTGTCATAATC +
Preference number: 5 (lower is better)
Translates to: LESSPSSGPTKPSFASVSFCCLG*KSCVII
Trigger: GATTATGACACAGCTCTTCAATCCAAGGCAGCAGAA...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp ACTCACTTGCCTTTCCTTAGAAAATTCCATCTGCGAGTCCCAAAGTaGCTGTTCAGTGCCCCCTCTTTCCTTACTATCTCCAGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: THLPFLRKFHLRVPK*LFSAPSFLTISSPL
Trigger: CAGAGGACTGGAGATAGTAAGGAAAGAGGGGGCACTGAACAGTCACTTTGGGACTCGCAGATGGAATTTTCTAAGGAAAGGCAAGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTATCGTTTGAATACGCGTaGTCCAGGCCAGGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLSFEYA*SRPGLL
Trigger: CAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGA...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCTGGTTGGAATTCATGTaGTCTCCTTCAGGATCTTGT +
Preference number: 5 (lower is better)
Translates to: LESSPSSGPTKPSFASVSWLEFM*SPSGSC
Trigger: ACAAGATCCTGAAGGAGACAACATGAATTCCAACCA...GGACACTGATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GTGGGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTGAGGTCCTTGAAGGCTaGTGGGGGAATTTTGAATAT +
Preference number: 5 (lower is better)
Translates to: VGPQNPHLHQCPLGWNSCEVLEG*WGNFEY
Trigger: ATATTCAAAATTCCCCCACAAGCCTTCAAGGACCTC...ACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTTGGGGAGTGCCCCCGTaGGCCTCCTCACTCCCTATA +
Preference number: 5 (lower is better)
Translates to: SLMIKLNILVFVILKLFFWGVPP*ASSLPI
Trigger: TATAGGGAGTGAGGAGGCCAACGGGGGCACTCCCCA...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATTTGCCCCGGACAGCCTaGGCTGCTGTATGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDLPRTA*AAVCSA
Trigger: TGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAA...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS GCA 90 bp GACCACCCTATTTGCAATATCCCATTGAATGACAGATCCAAACTCTaGAATGACTTCAGTTTCCACAGTCCCTTGGGAGTGTCACTGAGT +
Preference number: 5 (lower is better)
Translates to: DHPICNIPLNDRSKL*NDFSFHSPLGVSLS
Trigger: ACTCAGTGACACTCCCAAGGGACTGTGGAAACTGAAGTCATTGCAGAGTTTGGATCTGTCATTCAATGGGATATTGCAAATAGGGTGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 90 bp AGCCTTGGCTGCTGTATGCTCAGCAAATCAATGGATGAACTCACTTaGCTTTCCTTAGAAAATTCCATCTGCGAGTCCCAAAGTGACTGT +
Preference number: 5 (lower is better)
Translates to: SLGCCMLSKSMDELT*LSLENSICESQSDC
Trigger: ACAGTCACTTTGGGACTCGCAGATGGAATTTTCTAAGGAAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCAGTAATCAGAGCATTGTaGCTAAGGTCTATGACCTGT +
Preference number: 5 (lower is better)
Translates to: ITLLESSPSSGPTKPSFAVIRAL*LRSMTC
Trigger: ACAGGTCATAGACCTTAGCAACAATGCTCTGATTAC...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTACTTCAGTCTTGCTCCTaGCACTCTCTGAACTTATGG +
Preference number: 5 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLLQSCS*HSLNLW
Trigger: CCATAAGTTCAGAGAGTGCAAGGAGCAAGACTGAAG...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGACTGCCTCTTCAGTCTaGCTCCTTGCACTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLTASSV*LLALSE
Trigger: TTCAGAGAGTGCAAGGAGCAAGACTGAAGAGGCAGT...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GGCCCACAAAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTTGCATCAGTGTCCACTaGGTTGGAATTCATGTTGTC +
Preference number: 5 (lower is better)
Translates to: GPQNPHLHQCPLGWNSCCCISVH*VGIHVV
Trigger: GACAACATGAATTCCAACCAAGTGGACACTGATGCA...ACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTTTGTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp AACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCAGAACTTTTCCAATTTaGCAGTTTCACGATCAGCCT +
Preference number: 5 (lower is better)
Translates to: NPSRIIALKWAHKTLICIRTFPI*QFHDQP
Trigger: AGGCTGATCGTGAAACTGCAAAATTGGAAAAGTTCT...GATGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGAGGGAGTGGATGGCATaGTTGCTGAGGTTTAACACT +
Preference number: 5 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLREWMA*LLRFNT
Trigger: AGTGTTAAACCTCAGCAACAATGCCATCCACTCCCT...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGAGTTTCCACAGTCCCTaGGGAGTGTCACTGAGTTTA +
Preference number: 5 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLSFHSP*GVSLSL
Trigger: TAAACTCAGTGACACTCCCAAGGGACTGTGGAAACT...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTCTACAGCCGTCACATaGTCCTTGCTTGCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLSTAVT*SLLAPE
Trigger: CTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGA...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCGTAGAAGCCCTCGTTaGAATACGCGTTGTCCAGGC +
Preference number: 5 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVRRSPR*NTRCPG
Trigger: GCCTGGACAACGCGTATTCAAACGAGGGCTTCTACG...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTTCACATTGTCCTTGCTaGCCCCTGAGCTCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVSHCPC*PLSSRP
Trigger: AGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGA...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTGCTCCAGGTCTGTATTaGAGAAGGAAAGTTAGAACC +
Preference number: 5 (lower is better)
Translates to: KAVLFREPNPIRLLQVCIAPGLY*RRKVRT
Trigger: GGTTCTAACTTTCCTTCTCAAATACAGACCTGGAGC...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATAACCCTTCTAGAATCATCGCCCTCAAGTGGGCCCACAAAACCCTCATTTGCATCTTTGATGATCAAGTaGAACATCCTTGTCTTTGTC +
Preference number: 5 (lower is better)
Translates to: ITLLESSPSSGPTKPSFASLMIK*NILVFV
Trigger: GACAAAGACAAGGATGTTCAACTTGATCATCAAAGA...TGCAAATGAGGGTTTTGTGGGCCCACTTGAGGGCGATGATTCTAGAAGGGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS GCA 90 bp GCCTTATCAGGATCTGAGGGAACTTCAGCAGAACATGGTGGTGTTTaGTGTAAAACGTCCACATTTGAAAATTCTAAGTCTCTAAGTGAG +
Preference number: 5 (lower is better)
Translates to: ALSGSEGTSAEHGGV*CKTSTFENSKSLSE
Trigger: CTCACTTAGAGACTTAGAATTTTCAAATGTGGACGTTTTACAGCAAACACCACCATGTTCTGCTGAAGTTCCCTCAGATCCTGATAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp AAACCCTCATTTGCATCAGTGTCCACTTGGTTGGAATTCATGTTGTCTCCTTCACTCCCTATAGACCTGTaGCAAATGACATTCCACTTT +
Preference number: 5 (lower is better)
Translates to: KPSFASVSTWLEFMLSPSLPIDL*QMTFHF
Trigger: AAAGTGGAATGTCATTTGCAACAGGTCTATAGGGAG...TGAAGGAGACAACATGAATTCCAACCAAGTGGACACTGATGCAAATGAGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS CCA 90 bp CTATCATCACACTGCCAGTTATTATCAGCCAAGTCAACCACTAGATaGGGAAATTCTAGAGCTATGATCATCATTGGTAGGATGGTAATC +
Preference number: 5 (lower is better)
Translates to: LSSHCQLLSAKSTTR*GNSRAMIIIGRMVI
Trigger: GATTACCATCCTACCAATGATGATCATAGCTCTAGAATTTCCCCATCTAGTGGTTGACTTGGCTGATAATAACTGGCAGTGTGATGATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp ATTCCCCTCTTTCTCTTTCACACTGAAGAGCAGGTTCATCCCCATAGGATGTTAATTTGCAATATCCCATaGAATGACAGATCCAAACTC +
Preference number: 5 (lower is better)
Translates to: IPLFLFHTEEQVHPHRMLICNIP*NDRSKL
Trigger: GAGTTTGGATCTGTCATTCAATGGGATATTGCAAAT...TAACATCCTATGGGGATGAACCTGCTCTTCAGTGTGAAAGAGAAAGAGGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CACGATCAGCCTCCAAAAAGTTGTGCTAGTGTGTGTTCAGAATTCATTAAAATCACAGAGATTCTCCAGTaGCAGGCAGTTGTGAAAATC +
Preference number: 5 (lower is better)
Translates to: HDQPPKSCASVCSEFIKITEILQ*QAVVKI
Trigger: GATTTTCACAACTGCCTGCAACTGGAGAATCTCTGT...GATTTTAATGAATTCTGAACACACACTAGCACAACTTTTTGGAGGCTGATCGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTTTCTGCACTGGTTCCTaGTTAGCAGGAGTGACATCC +
Preference number: 5 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVFCTGS*LAGVTS
Trigger: GGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAA...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp AAAGCTGTTCTTTTCAGAGAGCCAAATCCCATCAGATTGCTCCAGGTCTGTATTCTCAGTGAACTGGTTTaGTTTGGAGCTCTTGTAATA +
Preference number: 5 (lower is better)
Translates to: KAVLFREPNPIRLLQVCILSELV*FGALVI
Trigger: TATTACAAGAGCTCCAAACAAAACCAGTTCACTGAG...AATACAGACCTGGAGCAATCTGATGGGATTTGGCTCTCTGAAAAGAACAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp GAATTCATGTTGTCTCCTTCAGGATCTTGTTGTGAAGGCTTTAGTTTTCCCCTGACTGAGTTTATTTCTTaGAAGAATGAGCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: EFMLSPSGSCCEGFSFPLTEFIS*KNEHLQ
Trigger: CTGAAGGTGCTCATTCTTCAAAGAAATAAACTCAGT...CAGGGGAAAACTAAAGCCTTCACAACAAGATCCTGAAGGAGACAACATGAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTCAGTGTCCACTTGGTaGGAATTCATGTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLSVSTW*EFMLSP
Trigger: AGGAGACAACATGAATTCCAACCAAGTGGACACTGA...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS CCA 90 bp AATGAGAGGTTTTTCAAAGGGATCTTCTTGATTCTTGCATTTCCCTaGAATTGTTTGGAAGGTAACATTTTCCTCAAGACTGTCTACAGC +
Preference number: 5 (lower is better)
Translates to: NERFFKGIFLILAFP*NCLEGNIFLKTVYS
Trigger: GCTGTAGACAGTCTTGAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAAAAACCTCTCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp AACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATGAAGTGCTCGCTTGTGGGGGAATTTaGAATATCTTGTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: NCNRFSSEYLPQPIDEVLACGGI*NILLLF
Trigger: AAAGAGCAACAAGATATTCAAAATTCCCCCACAAGC...GAGCACTTCATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS TCA 90 bp AACTCTAAAGAAATTGAAACTTACATCCACAGTGGCTGCTGTCTGTaGTATGTCCACAGGTATATCACACTTTCCGGTAAAAGAACAATT +
Preference number: 5 (lower is better)
Translates to: NSKEIETYIHSGCCL*YVHRYITLSGKRTI
Trigger: AATTGTTCTTTTACCGGAAAGTGTGATATACCTGTGGACATATCACAGACAGCAGCCACTGTGGATGTAAGTTTCAATTTCTTTAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS-3UTR CAA 90 bp ACTTCGTCTAACTGCAACAGATTCTCTTCTGAATATTTACCCCAACCTATTGATATGACCTGTAATTTTTaGAGGTCCTTGAAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: TSSNCNRFSSEYLPQPIDMTCNF*RSLKAC
Trigger: ACAAGCCTTCAAGGACCTCAAAAAATTACAGGTCAT...ATCAATAGGTTGGGGTAAATATTCAGAAGAGAATCTGTTGCAGTTAGACGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTATGGTAATCAGAGCATaGTTGCTAAGGTCTATGACC +
Preference number: 5 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVMVIRA*LLRSMT
Trigger: GGTCATAGACCTTAGCAACAATGCTCTGATTACCAT...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp CTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTTTCCCTGGAATTGTTaGGAAGGTAACATTTTCCTC +
Preference number: 5 (lower is better)
Translates to: LFDDQVEHPCLCHPKAVLFPWNC*EGNIFL
Trigger: GAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAA...AAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp ATTCTCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTTTCAAAGGGATCTTCTaGATTCTTGCATTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: ILFDDQVEHPCLCHPKAVFKGIF*ILAFPW
Trigger: CCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAA...AACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS-3UTR CAA 90 bp TCTTTGATGATCAAGTTGAACATCCTTGTCTTTGTCATCCTAAAGCTGTTCTTTATTTACCCCAACCTATaGATGAAGTGCTCCTGTGTT +
Preference number: 5 (lower is better)
Translates to: SLMIKLNILVFVILKLFFIYPNL*MKCSCV
Trigger: AACACAGGAGCACTTCATCAATAGGTTGGGGTAAAT...AAAGAACAGCTTTAGGATGACAAAGACAAGGATGTTCAACTTGATCATCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343457.3
CDS CAA 90 bp GACAGGCACACCGCCAGAGCCAGGTCCTGGGGAGCGTCCTCTTTTTaGCCGGCAGCCTGCACATCGCGGGTGCTTCTAACACTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: DRHTARARSWGASSF*PAACTSRVLLTLLG
Trigger: GCCAAGGAGTGTTAGAAGCACCCGCGATGTGCAGGCTGCCGGCAAAAAAGAGGACGCTCCCCAGGACCTGGCTCTGGCGGTGTGCCTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp GATGAATGGGAGGAAGGCGGGTTTCCCTGGAAATCCTaGTCTGGGGAGTGCCCCCGTTGGCCTCCTCACTCC +
Preference number: 6 (lower is better)
Translates to: DEWEEGGFPWKS*SGECPRWPPHS
Trigger: GGAGTGAGGAGGCCAACGGGGGCACTCCCCAGAGCAGGATTTCCAGGGAAACCCGCCTTCCTCCCATTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp TCCACTTCCTGCCCCGGTGTTGTCCCCGCACTGTCCTaGGCTCTGCGAACTGCCAGGATCCTTTCTGCTCCT +
Preference number: 6 (lower is better)
Translates to: STSCPGVVPALS*ALRTARILSAP
Trigger: AGGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp ACCGCCAGAGCCAGGTCCTGGGGAGCGTCCTCTTTTTaGCCGGCAGCCTGCACATCGCGGGTGCTTCTAACA +
Preference number: 6 (lower is better)
Translates to: TARARSWGASSF*PAACTSRVLLT
Trigger: TGTTAGAAGCACCCGCGATGTGCAGGCTGCCGGCAAAAAAGAGGACGCTCCCCAGGACCTGGCTCTGGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp TCGCGGGTGCTTCTAACACTCCTTGGCAGCCGTCTCTaGTTCTTCCTGAGACCAGAGCCGGCCTTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SRVLLTLLGSRL*FFLRPEPAFAF
Trigger: GAAGGCAAAGGCCGGCTCTGGTCTCAGGAAGAAGCAGAGACGGCTGCCAAGGAGTGTTAGAAGCACCCGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp CGTATGGAACCTCGCTGTAGTGGGCTGAAAGCGCTTCCTCAGCCCTaGCCCCGGACAGCCTTGGCTGCTGTATGCTCAGCAAATCAATGG +
Preference number: 6 (lower is better)
Translates to: RMEPRCSGLKALPQP*PRTALAAVCSANQW
Trigger: CCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCTTTCAGCCCACTACAGCGAGGTTCCATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp ACTGTCTACAGCCGTCACATTGTCCTTGCTTGCCCCTaGGCTCTCGTCCTGCAGGGACTCCTCATCAGGCAC +
Preference number: 6 (lower is better)
Translates to: TVYSRHIVLACP*ALVLQGLLIRH
Trigger: GTGCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp CGGTGTTGTCCCCGCACTGTCCTGGGCTCTGCGAACTaGCAGGATCCTTTCTGCTCCTTCCCAGAGTTCTAT +
Preference number: 6 (lower is better)
Translates to: RCCPRTVLGSAN*QDPFCSFPEFY
Trigger: ATAGAACTCTGGGAAGGAGCAGAAAGGATCCTGGCAGTTCGCAGAGCCCAGGACAGTGCGGGGACAACACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp GTCACATTGTCCTTGCTTGCCCCTGAGCTCTCGTCCTaGAGGGACTCCTCATCAGGCACTGCCTCTTCAGTC +
Preference number: 6 (lower is better)
Translates to: VTLSLLAPELSS*RDSSSGTASSV
Trigger: GACTGAAGAGGCAGTGCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GGCCACTGTCCCATCTTGGAGGAAAGACTGATGGGCCTGTGTCTCTaGGGTCACCGTATGGAACCTCGCTGTAGTGGGCTGAAAGCGCTT +
Preference number: 6 (lower is better)
Translates to: GHCPILEERLMGLCL*GHRMEPRCSGLKAL
Trigger: AAGCGCTTTCAGCCCACTACAGCGAGGTTCCATACGGTGACCCAAGAGACACAGGCCCATCAGTCTTTCCTCCAAGATGGGACAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp CCCCGCAGCTTCCATGTCATCGTAGAAGCCCTCGTTTaGATACGCGTTGTCCAGGCCAGGGCTTTTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PRSFHVIVEALV*IRVVQARAFAL
Trigger: CAGAGCAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGAGGGCTTCTACGATGACATGGAAGCTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp GAGAATGGAATAGACTGCACCATCATTTCCACTTCCTaGCCCGGTGTTGTCCCCGCACTGTCCTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: ENGIDCTIISTS*PGVVPALSWAL
Trigger: CAGAGCCCAGGACAGTGCGGGGACAACACCGGGGCAGGAAGTGGAAATGATGGTGCAGTCTATTCCATTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp GCCCCGCAGCTTCCATGTCATCGTAGAAGCCCTCGTTaGAATACGCGTTGTCCAGGCCAGGGCTTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: APQLPCHRRSPR*NTRCPGQGFCS
Trigger: AGAGCAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGAGGGCTTCTACGATGACATGGAAGCTGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp CCTCAAGACTGTCTACAGCCGTCACATTGTCCTTGCTaGCCCCTGAGCTCTCGTCCTGCAGGGACTCCTCAT +
Preference number: 6 (lower is better)
Translates to: PQDCLQPSHCPC*PLSSRPAGTPH
Trigger: ATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GTGGTGTGTGCCCCGCAGCTTCCATGTCATCGTAGAAGCCCTCGTTaGAATACGCGTTGTCCAGGCCAGGGCTTTTGCTCTGGCACTTTT +
Preference number: 6 (lower is better)
Translates to: VVCAPQLPCHRRSPR*NTRCPGQGFCSGTF
Trigger: AAAAGTGCCAGAGCAAAAGCCCTGGCCTGGACAACGCGTATTCAAACGAGGGCTTCTACGATGACATGGAAGCTGCGGGGCACACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp TGTAGTGGGCTGAAAGCGCTTCCTCAGCCCTTGCCCCGGACAGCCTaGGCTGCTGTATGCTCAGCAAATCAATGGATGAACTCACTTGCC +
Preference number: 6 (lower is better)
Translates to: CSGLKALPQPLPRTA*AAVCSANQWMNSLA
Trigger: GGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCTTTCAGCCCACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp GACATCCAGGCCACTGTCCCATCTTGGAGGAAAGACTaGTGGGCCTGTGTCTCTTGGGTCACCGTATGGAAC +
Preference number: 6 (lower is better)
Translates to: DIQATVPSWRKD*WACVSWVTVWN
Trigger: GTTCCATACGGTGACCCAAGAGACACAGGCCCATCAGTCTTTCCTCCAAGATGGGACAGTGGCCTGGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp AGAAATGCCCGTGTGCCTTCCTCCCTGGGGCCTCTCTaGTTTGCTCCTTATGAGGCTTTTCATGCGATGCAG +
Preference number: 6 (lower is better)
Translates to: RNARVPSSLGPL*FAPYEAFHAMQ
Trigger: CTGCATCGCATGAAAAGCCTCATAAGGAGCAAAGCAGAGAGGCCCCAGGGAGGAAGGCACACGGGCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp AGCGCTTCCTCAGCCCTTGCCCCGGACAGCCTTGGCTaGTGTATGCTCAGCAAATCAATGGATGAACTCACT +
Preference number: 6 (lower is better)
Translates to: SASSALAPDSLG*CMLSKSMDELT
Trigger: AGTGAGTTCATCCATTGATTTGCTGAGCATACAGCAGCCAAGGCTGTCCGGGGCAAGGGCTGAGGAAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp TTTCCTCAAGACTGTCTACAGCCGTCACATTGTCCTTaGTTGCCCCTGAGCTCTCGTCCTGCAGGGACTCCT +
Preference number: 6 (lower is better)
Translates to: FPQDCLQPSHCP*LPLSSRPAGTP
Trigger: AGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp TTCTGCTCCTTCCCAGAGTTCTATCAGGAATTACGGTaGCGTGTGGGTGTGGCTGTGTCACCCAGAAAGGGG +
Preference number: 6 (lower is better)
Translates to: FCSFPEFYQELR*RVGVAVSPRKG
Trigger: CCCCTTTCTGGGTGACACAGCCACACCCACACGCCACCGTAATTCCTGATAGAACTCTGGGAAGGAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp GAAACTCATCCCCTAAGGGACTATTCCCTGGTGACCTaGGCCAGGGTGACAGGCCCTCAGATCTATCAGTGT +
Preference number: 6 (lower is better)
Translates to: ETHPLRDYSLVT*ARVTGPQIYQC
Trigger: ACACTGATAGATCTGAGGGCCTGTCACCCTGGCCCAGGTCACCAGGGAATAGTCCCTTAGGGGATGAGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp TTTTCCTCAAGACTGTCTACAGCCGTCACATTGTCCTaGCTTGCCCCTGAGCTCTCGTCCTGCAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: FSSRLSTAVTLS*LAPELSSCRDS
Trigger: GGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp TGCCAGCTACAGAAGAGACGCCCACTGAATGTGCACTaGGAGGCTCTTCCTGGGCCACAGTTTCATAAGTCC +
Preference number: 6 (lower is better)
Translates to: CQLQKRRPLNVH*EALPGPQFHKS
Trigger: GGACTTATGAAACTGTGGCCCAGGAAGAGCCTCTCAGTGCACATTCAGTGGGCGTCTCTTCTGTAGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp AATCATAACGGCTTGAGCCAGAGACAGCGTGAGACGTaGCAGCTACAGAAGAGACGCCCACTGAATGTGCAC +
Preference number: 6 (lower is better)
Translates to: NHNGLSQRQRET*QLQKRRPLNVH
Trigger: GTGCACATTCAGTGGGCGTCTCTTCTGTAGCTGGCACGTCTCACGCTGTCTCTGGCTCAAGCCGTTATGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp CAGAGTTCTATCAGGAATTACGGTGGCGTGTGGGTGTaGCTGTGTCACCCAGAAAGGGGTCTGGTTCTCGTA +
Preference number: 6 (lower is better)
Translates to: QSSIRNYGGVWV*LCHPERGLVLV
Trigger: TACGAGAACCAGACCCCTTTCTGGGTGACACAGCCACACCCACACGCCACCGTAATTCCTGATAGAACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp CTCTCGTCCTGCAGGGACTCCTCATCAGGCACTGCCTCTTCAGTCTaGCTCCTTGCACTCTCTGAACTTATGGAGCTCAGAGTGAACAGA +
Preference number: 6 (lower is better)
Translates to: LSSCRDSSSGTASSV*LLALSELMELRVNR
Trigger: TCTGTTCACTCTGAGCTCCATAAGTTCAGAGAGTGCAAGGAGCAAGACTGAAGAGGCAGTGCCTGATGAGGAGTCCCTGCAGGACGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp AAGGTAACATTTTCCTCAAGACTGTCTACAGCCGTCACATTGTCCTaGCTTGCCCCTGAGCTCTCGTCCTGCAGGGACTCCTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: KVTFSSRLSTAVTLS*LAPELSSCRDSSSG
Trigger: GCCTGATGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAAATGTTACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp GTAACATTTTCCTCAAGACTGTCTACAGCCGTCACATaGTCCTTGCTTGCCCCTGAGCTCTCGTCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: VTFSSRLSTAVT*SLLAPELSSCR
Trigger: CCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAAATGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp TTTCTCCGGAGAGGGAAGGGTCTAATTCATTGGAATCATAACGGCTaGAGCCAGAGACAGCGTGAGACGTGCCAGCTACAGAAGAGACGC +
Preference number: 6 (lower is better)
Translates to: FLRRGKGLIHWNHNG*SQRQRETCQLQKRR
Trigger: GCGTCTCTTCTGTAGCTGGCACGTCTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCAATGAATTAGACCCTTCCCTCTCCGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GTTTGGAAGGTAACATTTTCCTCAAGACTGTCTACAGCCGTCACATaGTCCTTGCTTGCCCCTGAGCTCTCGTCCTGCAGGGACTCCTCA +
Preference number: 6 (lower is better)
Translates to: VWKVTFSSRLSTAVT*SLLAPELSSCRDSS
Trigger: TGAGGAGTCCCTGCAGGACGAGAGCTCAGGGGCAAGCAAGGACAATGTGACGGCTGTAGACAGTCTTGAGGAAAATGTTACCTTCCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp AACTCACAGCAAGTGTCAGAAGGAGTGGATTTCTGCACTGGTTCCTaGTTAGCAGGAGTGACATCCAGGCCACTGTCCCATCTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: NSQQVSEGVDFCTGS*LAGVTSRPLSHLGG
Trigger: TCCTCCAAGATGGGACAGTGGCCTGGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTCTGACACTTGCTGTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp AGAGGGAAGGGTCTAATTCATTGGAATCATAACGGCTaGAGCCAGAGACAGCGTGAGACGTGCCAGCTACAG +
Preference number: 6 (lower is better)
Translates to: RGKGLIHWNHNG*SQRQRETCQLQ
Trigger: CTGTAGCTGGCACGTCTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCAATGAATTAGACCCTTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp CAAGTGTCAGAAGGAGTGGATTTCTGCACTGGTTCCTaGTTAGCAGGAGTGACATCCAGGCCACTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: QVSEGVDFCTGS*LAGVTSRPLSH
Trigger: ATGGGACAGTGGCCTGGATGTCACTCCTGCTAACAAGGAACCAGTGCAGAAATCCACTCCTTCTGACACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp CATTCTCCGAGAATATCATTCCTATGGATGTGGTCCTaGGCTGCTGACATTAGTTCACGGTTACCGGCATGT +
Preference number: 6 (lower is better)
Translates to: HSPRISFLWMWS*AADISSRLPAC
Trigger: ACATGCCGGTAACCGTGAACTAATGTCAGCAGCGCAGGACCACATCCATAGGAATGATATTCTCGGAGAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp AAAATTCCATCTGCGAGTCCCAAAGTGACTGTTCAGTaGCCCCTCTTTCCTTACTATCTCCAGTCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: KIPSASPKVTVQ*PLFPYYLQSSV
Trigger: CACAGAGGACTGGAGATAGTAAGGAAAGAGGGGGCACTGAACAGTCACTTTGGGACTCGCAGATGGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp CTGTTATTTCTCCGGAGAGGGAAGGGTCTAATTCATTaGAATCATAACGGCTTGAGCCAGAGACAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: LLFLRRGKGLIH*NHNGLSQRQRE
Trigger: CTCACGCTGTCTCTGGCTCAAGCCGTTATGATTCCAATGAATTAGACCCTTCCCTCTCCGGAGAAATAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp CCTTTCCTTAGAAAATTCCATCTGCGAGTCCCAAAGTaGCTGTTCAGTGCCCCCTCTTTCCTTACTATCTCC +
Preference number: 6 (lower is better)
Translates to: PFLRKFHLRVPK*LFSAPSFLTIS
Trigger: GGAGATAGTAAGGAAAGAGGGGGCACTGAACAGTCACTTTGGGACTCGCAGATGGAATTTTCTAAGGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp CTGCCTTGGATTGAAGAGCTGTGTCATAATCATAAGTaGACATGCCCGGAAACTCATCCCCTAAGGGACTAT +
Preference number: 6 (lower is better)
Translates to: LPWIEELCHNHK*TCPETHPLRDY
Trigger: ATAGTCCCTTAGGGGATGAGTTTCCGGGCATGTTCACTTATGATTATGACACAGCTCTTCAATCCAAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp GGACTGAGTAGATCCAATGAGAGGGAGTGGATGGCATaGTTGCTGAGGTTTAACACTTCCAAAGCATGTAAA +
Preference number: 6 (lower is better)
Translates to: GLSRSNEREWMA*LLRFNTSKACK
Trigger: TTTACATGCTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCCACTCCCTCTCATTGGATCTACTCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GACTTAGGACTGAGTAGATCCAATGAGAGGGAGTGGATGGCATTGTaGCTGAGGTTTAACACTTCCAAAGCATGTAAATATGCAAAAGGG +
Preference number: 6 (lower is better)
Translates to: DLGLSRSNEREWMAL*LRFNTSKACKYAKG
Trigger: CCCTTTTGCATATTTACATGCTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCCACTCCCTCTCATTGGATCTACTCAGTCCTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp ATTTGCAATATCCCATTGAATGACAGATCCAAACTCTaGAATGACTTCAGTTTCCACAGTCCCTTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: ICNIPLNDRSKL*NDFSFHSPLGV
Trigger: CACTCCCAAGGGACTGTGGAAACTGAAGTCATTGCAGAGTTTGGATCTGTCATTCAATGGGATATTGCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp TGCTGTATGCTCAGCAAATCAATGGATGAACTCACTTaGCTTTCCTTAGAAAATTCCATCTGCGAGTCCCAA +
Preference number: 6 (lower is better)
Translates to: CCMLSKSMDELT*LSLENSICESQ
Trigger: TTGGGACTCGCAGATGGAATTTTCTAAGGAAAGGCAAGTGAGTTCATCCATTGATTTGCTGAGCATACAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp TCCTTGAAGGCTTGTGGGGGAATTTTGAATATCTTGTaGCTCTTTAAACAGAGATTCTCCAGTTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLKACGGILNIL*LFKQRFSSCRQ
Trigger: CTGCCTGCAACTGGAGAATCTCTGTTTAAAGAGCAACAAGATATTCAAAATTCCCCCACAAGCCTTCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GAGGACTTAGGACTGAGTAGATCCAATGAGAGGGAGTGGATGGCATaGTTGCTGAGGTTTAACACTTCCAAAGCATGTAAATATGCAAAA +
Preference number: 6 (lower is better)
Translates to: EDLGLSRSNEREWMA*LLRFNTSKACKYAK
Trigger: TTTTGCATATTTACATGCTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCCACTCCCTCTCATTGGATCTACTCAGTCCTAAGTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp GAAATTGAAACTTACATCCACAGTGGCTGCTGTCTGTaGTATGTCCACAGGTATATCACACTTTCCGGTAAA +
Preference number: 6 (lower is better)
Translates to: EIETYIHSGCCL*YVHRYITLSGK
Trigger: TTTACCGGAAAGTGTGATATACCTGTGGACATATCACAGACAGCAGCCACTGTGGATGTAAGTTTCAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS TCA 72 bp GTAGATCCAATGAGAGGGAGTGGATGGCATTGTTGCTaGGGTTTAACACTTCCAAAGCATGTAAATATGCAA +
Preference number: 6 (lower is better)
Translates to: VDPMRGSGWHCC*GLTLPKHVNMQ
Trigger: TTGCATATTTACATGCTTTGGAAGTGTTAAACCTCAGCAACAATGCCATCCACTCCCTCTCATTGGATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS GCA 72 bp GGATCTGAGGGAACTTCAGCAGAACATGGTGGTGTTTaGTGTAAAACGTCCACATTTGAAAATTCTAAGTCT +
Preference number: 6 (lower is better)
Translates to: GSEGTSAEHGGV*CKTSTFENSKS
Trigger: AGACTTAGAATTTTCAAATGTGGACGTTTTACAGCAAACACCACCATGTTCTGCTGAAGTTCCCTCAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp GGGATCTTCTTGATTCTTGCATTTCCCTGGAATTGTTaGGAAGGTAACATTTTCCTCAAGACTGTCTACAGC +
Preference number: 6 (lower is better)
Translates to: GIFLILAFPWNC*EGNIFLKTVYS
Trigger: GCTGTAGACAGTCTTGAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GCCAGAGTCTGGAGCAGAAATGAGAGGTTTTTCAAAGGGATCTTCTaGATTCTTGCATTTCCCTGGAATTGTTTGGAAGGTAACATTTTC +
Preference number: 6 (lower is better)
Translates to: ARVWSRNERFFKGIF*ILAFPWNCLEGNIF
Trigger: GAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAAAAACCTCTCATTTCTGCTCCAGACTCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp TTTTTCAAAGGGATCTTCTTGATTCTTGCATTTCCCTGGAATTGTTaGGAAGGTAACATTTTCCTCAAGACTGTCTACAGCCGTCACATT +
Preference number: 6 (lower is better)
Translates to: FFKGIFLILAFPWNC*EGNIFLKTVYSRHI
Trigger: AATGTGACGGCTGTAGACAGTCTTGAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 90 bp GCAAATGACATTCCACTTTTTCCTCCAGGATTCAGAAATAAAATTTaGAAAGACTGCCACACTATCATCACACTGCCAGTTATTATCAGC +
Preference number: 6 (lower is better)
Translates to: ANDIPLFPPGFRNKI*KDCHTIITLPVIIS
Trigger: GCTGATAATAACTGGCAGTGTGATGATAGTGTGGCAGTCTTTCAAAATTTTATTTCTGAATCCTGGAGGAAAAAGTGGAATGTCATTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CAA 72 bp ATTCCACTTTTTCCTCCAGGATTCAGAAATAAAATTTaGAAAGACTGCCACACTATCATCACACTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: IPLFPPGFRNKI*KDCHTIITLPV
Trigger: AACTGGCAGTGTGATGATAGTGTGGCAGTCTTTCAAAATTTTATTTCTGAATCCTGGAGGAAAAAGTGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1
CDS CCA 72 bp TTTTTCAAAGGGATCTTCTTGATTCTTGCATTTCCCTaGAATTGTTTGGAAGGTAACATTTTCCTCAAGACT +
Preference number: 6 (lower is better)
Translates to: FFKGIFLILAFP*NCLEGNIFLKT
Trigger: AGTCTTGAGGAAAATGTTACCTTCCAAACAATTCCAGGGAAATGCAAGAATCAAGAAGATCCCTTTGAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000343457.3
ENST00000682860.1