RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000129295

Ensembl transcript IDs: ENST00000250173.5, ENST00000518101.1, ENST00000518642.5, ENST00000519595.5, ENST00000520446.5, ENST00000522584.5, ENST00000522789.5, ENST00000523503.1, ENST00000618342.1, ENST00000620350.5

Found 381 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGTGTCCATCCCATCTTTCTTACCGCAGGCCTGCTGACGAAGGCTaGCTCCAAGCCCACCCACCAGGATCTTGGCCACGGACCAGAAGG +
Preference number: 1 (lower is better)
Translates to: VCPSHLSYRRPADEG*LQAHPPGSWPRTRR
Trigger: CCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGATGGACACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR TCA 90 bp AGTCGCAGTGATGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTaGTCCTTGATCTCCACCACTGTGTGTCCATCCCATCTTTCTTAC +
Preference number: 1 (lower is better)
Translates to: SRSDGQMQRDPACCS*SLISTTVCPSHLSY
Trigger: GTAAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGGG +
Preference number: 1 (lower is better)
Translates to: WSLHQPKLDLVGLSQ*QRSQMFQISGGTSG
Trigger: CCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR TCA 90 bp ACCATGAAGAAAGGTGTTATACTCAGTCATTGCCATCAGTCGCAGTaGTGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTGATCCTT +
Preference number: 1 (lower is better)
Translates to: TMKKGVILSHCHQSQ*WTDAEGPSLLQLIL
Trigger: AAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTTCTTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR TCA 90 bp CCCAATCACAGTCCTACTTCAGCTTCTCAGATTCTGTGCAAGTTCTaGATTGTCTACCTGTACCAGTGCTTCTTCTTCCAATTCTCTACC +
Preference number: 1 (lower is better)
Translates to: PNHSPTSASQILCKF*IVYLYQCFFFQFST
Trigger: GGTAGAGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR GCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATaGATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTC +
Preference number: 1 (lower is better)
Translates to: AAILTNNSVFIPGII*IWSLHQPKLDLVGL
Trigger: GAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
3UTR CCA 90 bp ATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATaGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAA +
Preference number: 1 (lower is better)
Translates to: ILTNNSVFIPGIICI*SLHQPKLDLVGLSQ
Trigger: TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
3UTR TCA 90 bp AATACAGTCCTGACAAATGTACATGATTTCCAAGTTGGTAGAGGTTaGGTTCTGTTGGATTATGATATGTCAAGTTGGCTAAGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: NTVLTNVHDFQVGRG*VLLDYDMSSWLRLG
Trigger: TCCCAGCCTTAGCCAACTTGACATATCATAATCCAACAGAACTCAACCTCTACCAACTTGGAAATCATGTACATTTGTCAGGACTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR TCA 90 bp CTAAGGCTCAGAGAATTAAAGGACTTGCTGAAGGTCTTTACAAAGTaGTTGAGCTGGAATCCAAATATAGAGTGTCTGGTTTCAAAACTC +
Preference number: 1 (lower is better)
Translates to: LRLRELKDLLKVFTK*LSWNPNIECLVSKL
Trigger: GAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCTGAGCCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR GCA 90 bp TATAGAGTGTCTGGTTTCAAAACTCATATTCTTGCCATTATACCATaGCACCAGAGAAAGCAGACACATCATGGGAAGGAAAATGGAAAT +
Preference number: 1 (lower is better)
Translates to: YRVSGFKTHILAIIP*HQRKQTHHGKENGN
Trigger: ATTTCCATTTTCCTTCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR CCA 90 bp ACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGACGGACGCCCATCACTaGTCTTACCCACGACCTGAC +
Preference number: 2 (lower is better)
Translates to: TWWVSANGNAARCFKSAETDAHH*SYPRPD
Trigger: GTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGT...CTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR TCA 90 bp GCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTGTCTTACCCACGACCTaGCTGTCAGAAACATCACCT +
Preference number: 2 (lower is better)
Translates to: ANGNAARCFKSAEALQGCVLPTT*LSETSP
Trigger: AGGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGAC...ACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR TCA 90 bp GCACATGGGTTCCCCATGAGAAAGAGCTCCTTCAGATGGATATTGTGCTGCAAGCCTGCCTGGAATTCATaGCACAGGTGGAGATGGAGA +
Preference number: 2 (lower is better)
Translates to: AHGFPMRKSSFRWILCCKPAWNS*HRWRWR
Trigger: TCTCCATCTCCACCTGTGTCATGAATTCCAGGCAGG...CTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
3UTR-3UTR CCA 90 bp GACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGATGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: DLVGLSQWQRSQMFQISGWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...TCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CCA 90 bp ACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 2 (lower is better)
Translates to: TWWVSANGNAARCFKSAEVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...CTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR TCA 90 bp CGTGGTTCCTGGGTAGAGTTGACCATGAAGAAAGGTGTTATACTCAGTCATTGCAGCACCCATCACCCTTaGTTCCCTCACTCTGACTCT +
Preference number: 2 (lower is better)
Translates to: RGSWVELTMKKGVILSHCSTHHP*FPHSDS
Trigger: AGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCT...GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR TCA 90 bp GCACATGGGTTCCCCATGAGAAAGAGCTCCTTCAGATGGATATTGTGCTGCAAGTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 2 (lower is better)
Translates to: AHGFPMRKSSFRWILCCKCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...CTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
3UTR-3UTR GCA 90 bp GTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 2 (lower is better)
Translates to: VSNQRRHFRVVFKGWVFLTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...GAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR TCA 90 bp AGCTCCCAATCACAGTCCTACTTCAGCTTCTCAGATTCTGTGCAAGTTCTGAATTCTCCTTCACAGCTCTaGACACCACCTGACATAGTC +
Preference number: 2 (lower is better)
Translates to: SSQSQSYFSFSDSVQVLNSPSQL*TPPDIV
Trigger: GACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGA...ATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR GCA 90 bp ATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 2 (lower is better)
Translates to: MFQISGGTSGLSSKVGSSTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...GGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CCA 90 bp TCCCACATTTGTGCCCAATTGCATTCCTATAACCAGTCCCTCATTCTCATCATAAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGC +
Preference number: 2 (lower is better)
Translates to: SHICAQLHSYNQSLILIINQNWT*WVSANG
Trigger: GCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTT...TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR TCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTGGAGCAGCGATATTaGCAAATAACTCTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQLEQRY*QITLCL
Trigger: TAAACACAGAGTTATTTGTCAATATCGCTGCTCCAG...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
3UTR-3UTR TCA 90 bp TCCCACATTTGTGCCCAATTGCATTCCTATAACCAGTCCCTCATTCTCATCATATTGATTCCCTCACTCTaGCTCTCCTTCACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: SHICAQLHSYNQSLILIILIPSL*LSFTAL
Trigger: CAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAA...TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR GCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTAGTTTCTCCATGTaGTTGCTTCTTTGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGSSFSM*LLLCFP
Trigger: GGGAAAGCAAAGAAGCAAGCACATGGAGAAACTAGA...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR GCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACGTTTCTCCATGTGCTTaGTTCTTTGCTTTCCCCGCC +
Preference number: 2 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDVSPCA*FFAFPA
Trigger: GGCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAAC...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAACGGACGCCCATCACTaGTCTTACCCACGACCTGAC +
Preference number: 2 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQTDAHH*SYPRPD
Trigger: GTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 2 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CCA 90 bp TCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGAGACCAGCTTGCAGATaGTGTGAGAGAACAAAATCT +
Preference number: 2 (lower is better)
Translates to: SNEIHSQVKFCQLFTSCLRPACR*CERTKS
Trigger: AGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCT...CAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
3UTR-3UTR CCA 90 bp TTGAGCTGGAATCCAAATATAGAGTGTCTGGTTTCAAAACTCATATTCTTGCCACAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 2 (lower is better)
Translates to: LSWNPNIECLVSKLIFLPQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...TGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR TCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAAGTCTTACCCACGACCTaGCTGTCAGAAACATCACCT +
Preference number: 2 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKVLPTT*LSETSP
Trigger: AGGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGAC...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR CAA 90 bp AGCTGGAATCCAAATATAGAGTGTCTGGTTTCAAAACTCATATTCTaGCCATTATACCATGCCACCAGAGAAAGCAGACACATCATGGGA +
Preference number: 2 (lower is better)
Translates to: SWNPNIECLVSKLIF*PLYHATRESRHIMG
Trigger: TCCCATGATGTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR TCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGAGCAGCGATATTaGCAAATAACTCTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDLEQRY*QITLCL
Trigger: TAAACACAGAGTTATTTGTCAATATCGCTGCTCCAG...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
3UTR CCA 72 bp TCCCATCTTTCTTACCGCAGGCCTGCTGACGAAGGCTaGCTCCAAGCCCACCCACCAGGATCTTGGCCACGG +
Preference number: 3 (lower is better)
Translates to: SHLSYRRPADEG*LQAHPPGSWPR
Trigger: CCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGGCCTGCGGTAAGAAAGATGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR CAA 90 bp CCATCAGTCGCAGTGATGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTGATCCACCCACCAGGATCTaGGCCACGGACCAGAAGGGT +
Preference number: 3 (lower is better)
Translates to: PSVAVMDRCRGTQPAAADPPTRI*ATDQKG
Trigger: ACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGG...ATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR TCA 72 bp GATGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTaGTCCTTGATCTCCACCACTGTGTGTCCATCCCAT +
Preference number: 3 (lower is better)
Translates to: DGQMQRDPACCS*SLISTTVCPSH
Trigger: ATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CCA 72 bp CACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: HQPKLDLVGLSQ*QRSQMFQISGG
Trigger: GCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR TCA 72 bp AGATGCAGAGGGACCCAGCCTGCTGCAGCTGATCCTTaGTCTCCACCACTGTGTGTCCATCCCATCTTTCTT +
Preference number: 3 (lower is better)
Translates to: RCRGTQPAAADP*SPPLCVHPIFL
Trigger: AAGAAAGATGGGATGGACACACAGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR CAA 90 bp GACGAAGGCTGGCTCCAAGCCCACCCACCAGGATCTTGGCCACGGACCAGAAGGCTAAGCTTGACCACTTaGCTGAAGTACCAATTTAAT +
Preference number: 3 (lower is better)
Translates to: DEGWLQAHPPGSWPRTRRLSLTT*LKYQFN
Trigger: ATTAAATTGGTACTTCAGCAAAGTGGTCAAGCTTAG...CCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR TCA 72 bp AAAGGTGTTATACTCAGTCATTGCCATCAGTCGCAGTaGTGGACAGATGCAGAGGGACCCAGCCTGCTGCAG +
Preference number: 3 (lower is better)
Translates to: KGVILSHCHQSQ*WTDAEGPSLLQ
Trigger: CTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGGCAATGACTGAGTATAACACCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CCA 72 bp TTAATGTCAGAGGCCTCTAGGACGGACGCCCATCACTaGTCTTACCCACGACCTGACTGTCAGAAACATCAC +
Preference number: 3 (lower is better)
Translates to: LMSEASRTDAHH*SYPRPDCQKHH
Trigger: GTGATGTTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGACATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR CCA 72 bp TATGCATATGGTCTCTACACCAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGT +
Preference number: 3 (lower is better)
Translates to: YAYGLYTNQNWT*WVSANGNAARC
Trigger: ACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
3UTR-3UTR CAA 90 bp CAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 3 (lower is better)
Translates to: QRRHFRVVFKGWVFLTWYSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR CCA 72 bp GGCTGGGAGCTGTTTTCCAGAATTTCCTTCCCTACGTaGTTCCTGGGTAGAGTTGACCATGAAGAAAGGTGT +
Preference number: 3 (lower is better)
Translates to: GWELFSRISFPT*FLGRVDHEERC
Trigger: ACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR CAA 90 bp ATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCAGTTTCTCCATGTGCTaGCTTCTTTGCTTTCCCCGC +
Preference number: 3 (lower is better)
Translates to: MFQISGGTSGLSSKVGSSSFSMC*LLCFPR
Trigger: GCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAACT...GGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CAA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGAGTTTCTCCATGTGCTaGCTTCTTTGCTTTCCCCGC +
Preference number: 3 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGSFSMC*LLCFPR
Trigger: GCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAACT...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CAA 90 bp TCAAGTTGGCTAAGGCTGGGAGCTGTTTTCCAGAATTTCCTTCCCTACGTGGTTCAGCTCTTCCCACATTaGTGCCCAATTGCATTCCTA +
Preference number: 3 (lower is better)
Translates to: SSWLRLGAVFQNFLPYVVQLFPH*CPIAFL
Trigger: TAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTG...AACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR-3UTR CAA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 3 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIISGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR CCA 72 bp AATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGG +
Preference number: 3 (lower is better)
Translates to: NQRRHFRVVFKG*VFLTWYNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CAA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR-3UTR CAA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 3 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR GCA 72 bp CTTCACTACCCAGCTCTTCCCACATTTGTGCCCAATTaGATTCCTATAACCAGTCCCTCATTCTCATCATAT +
Preference number: 3 (lower is better)
Translates to: LHYPALPTFVPN*IPITSPSFSSY
Trigger: ATATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CCA 72 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATaGTCTCTACACCAACCAAAACTGGACCTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: NNSVFIPGIICI*SLHQPKLDLVG
Trigger: ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
3UTR-3UTR CAA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGTCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 3 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
3UTR GCA 72 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATaGATATGGTCTCTACACCAACCAAAACTGGACCTG +
Preference number: 3 (lower is better)
Translates to: LTNNSVFIPGII*IWSLHQPKLDL
Trigger: CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
3UTR TCA 72 bp AGAGAATTAAAGGACTTGCTGAAGGTCTTTACAAAGTaGTTGAGCTGGAATCCAAATATAGAGTGTCTGGTT +
Preference number: 3 (lower is better)
Translates to: RELKDLLKVFTK*LSWNPNIECLV
Trigger: AACCAGACACTCTATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAATTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp GTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCGCCTCTCCAGTTCGCTaGCCCCGCAAGCCGGACCCG +
Preference number: 4 (lower is better)
Translates to: VSNQRRHFRVVFKGWVFLASPVR*PRKPDP
Trigger: CGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGC...GAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTGCCTCTCCAGTTCGCTaGCCCCGCAAGCCGGACCCG +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIIASPVR*PRKPDP
Trigger: CGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGC...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTGCCTCTCCAGTTCGCTaGCCCCGCAAGCCGGACCCG +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGASPVR*PRKPDP
Trigger: CGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGC...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000620350.5
CDS-3UTR TCA 90 bp GACGAAGGCTGGCTCCAAGCCCACCCACCAGGATCTTGGCCACGGACCAGAAGGCTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DEGWLQAHPPGSWPRTRRLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...CCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGTCACATCAGGGAATaGGTGCTTGCTAGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVSHIRE*VLARVY
Trigger: GTAGACCCTAGCAAGCACTCATTCCCTGATGTGACT...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCACGGACGCCCATCACTaGTCTTACCCACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRTDAHH*SYPRPD
Trigger: GTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGT...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: SEASRTDAHHWSYPRPDCQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...ACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp CTCAGCTCTCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATGCCTCTCCAGTTCGCTaGCCCCGCAAGCCGGACCCG +
Preference number: 4 (lower is better)
Translates to: LSSPMKFTVRSSFASSSHASPVR*PRKPDP
Trigger: CGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGC...ATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp GCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACTCGCTGACCACCTGTaGTTACTTCTCCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: ASRTDAHHWSYPRPDCQKLADHL*LLLLPW
Trigger: CCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAG...TTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp TCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTGTTTCTCCATGTGCTTaGTTCTTTGCTTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SEASRTDAHHWSYPRPDCVSPCA*FFAFPA
Trigger: GGCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAAC...ACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCTCTGGTGCCTGTAGGTaGTCTTTGCTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVSGACR*SLLSKE
Trigger: CTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGA...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp GGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAACGGACGCCCATCACTaGTCTTACCCACGACCTGAC +
Preference number: 4 (lower is better)
Translates to: GLSQWQRSQMFQISGGTSTDAHH*SYPRPD
Trigger: GTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGT...TGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp GCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ASRTDAHHWSYPRPDCQKHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...TTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp TCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SEASRTDAHHWSYPRPDCLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...ACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCCTCGCTGACCACCTGTaGTTACTTCTCCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRLADHL*LLLLPW
Trigger: CCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAG...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCGATTTGAATGCTCGCTaGCCACCTGTGATTACTTCT +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVDLNAR*PPVITS
Trigger: AGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATC...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACATCACCCTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: GRTPITGLTHDLTVRNITLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...GGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp TTAATGTCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGTCTTACCCACGACCTaGCTGTCAGAAACATCACCT +
Preference number: 4 (lower is better)
Translates to: LMSEASRTDAHHWSYPRPVLPTT*LSETSP
Trigger: AGGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGAC...AGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGACATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp GGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACATCACCATCGGGTTTCACTTCTaGAGGAAGGACAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: GRTPITGLTHDLTVRNITIGFHF*RKDKLS
Trigger: GGAAAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...GGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp GACGAAGGCTGGCTCCAAGCCCACCCACCAGGATCTTGGCCACGGACCAGAAGGCAAAACTCATATTCTTaGCATTATACCATGCCACCA +
Preference number: 4 (lower is better)
Translates to: DEGWLQAHPPGSWPRTRRQNSYS*HYTMPP
Trigger: TGGTGGCATGGTATAATGGCAAGAATATGAGTTTTG...CCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGGGCTTGGAGCCAGCCTTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGCCTCTCCAGTTCGCTaGCCCCGCAAGCCGGACCCG +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLASPVR*PRKPDP
Trigger: CGGGTCCGGCTTGCGGGGTCAGCGAACTGGAGAGGC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000620350.5
CDS-3UTR TCA 90 bp GCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAAGGACAAGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: ASRTDAHHWSYPRPDCQKGQAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCTTGTCC...TTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAGACCCGGACCTCGAATaGCGCTTTTCACCCTTCACC +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPDPDLE*RFSPFT
Trigger: GGTGAAGGGTGAAAAGCGTCATTCGAGGTCCGGGTC...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519595.5
CDS-3UTR TCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCGCAGGAAGGACAAGCTaGAATGGCTTTCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRAGRTS*NGFPLI
Trigger: GATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGC...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCATCAGTCGCAGTGATGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTGATCTTGAGACAAACCTGTaGGGCAAGTGTTATTATTCC +
Preference number: 4 (lower is better)
Translates to: PSVAVMDRCRGTQPAAADLETNL*GKCYYS
Trigger: GGAATAATAACACTTGCCTCACAGGTTTGTCTCAAG...ATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp TTAATGTCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LMSEASRTDAHHWSYPRPVKGST*VPHEKE
Trigger: CTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGAC...AGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGACATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTTACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: SEASRTDAHHWSYPRPDCYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...ACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTAATGTCAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTCAGCAAGGTCCAGGATaGTCTGCTTTTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: LMSEASRTDAHHWSYPRPQQGPG*SAFRYL
Trigger: AAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG...AGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTGACATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp GACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGACAGCAAGGTCCAGGATaGTCTGCTTTTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: DLVGLSQWQRSQMFQISGQQGPG*SAFRYL
Trigger: AAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG...TCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGGTCCAGGATGATCTaGTTTTCGTTATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVRSRMI*FSLSFK
Trigger: TTTGAAAGATAACGAAAAGCAGATCATCCTGGACCT...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TCCCACATTTGTGCCCAATTGCATTCCTATAACCAGTCCCTCATTCTCATCATACCTGCTGACGAAGGCTaGCTCCAAGCCCACCCACCA +
Preference number: 4 (lower is better)
Translates to: SHICAQLHSYNQSLILIIPADEG*LQAHPP
Trigger: TGGTGGGTGGGCTTGGAGCCAGCCTTCGTCAGCAGG...TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp GCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: ANGNAARCFKSAEALQGCCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...ACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGCTCGCTGACCACCTGTaGTTACTTCTCCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGLADHL*LLLLPW
Trigger: CCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAG...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTACGTCCATCAAAGCCTaGGTTACTTCTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: ANGNAARCFKSAEALQGCTSIKA*VTSLVF
Trigger: GAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGT...ACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQNQNWT*WVSANG
Trigger: GCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTT...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGGACAAGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNGQAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCTTGTCC...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp GATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCGTCTTACCCACGACCTaGCTGTCAGAAACATCACCT +
Preference number: 4 (lower is better)
Translates to: DVSNQRRHFRVVFKGWVFVLPTT*LSETSP
Trigger: AGGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGAC...GAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAGCAGGAAGGACAAGCTaGAATGGCTTTCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQAGRTS*NGFPLI
Trigger: GATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGC...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CAGCTCTCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCCCTGCCTGGAATTCATaGCACAGGTGGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: QLSNEIHSQVKFCQLFTSPAWNS*HRWRWR
Trigger: TCTCCATCTCCACCTGTGTCATGAATTCCAGGCAGG...GGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATCTCCTTCACAGCTCTaGACACCACCTGACATAGTC +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQSPSQL*TPPDIV
Trigger: GACTATGTCAGGTGGTGTTCAGAGCTGTGAAGGAGA...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp TCCACAAGCTCCCAATCACAGTCCTACTTCAGCTTCTCAGATTCTGTGCAAGTTAGCACCCATCACCCTTaGTTCCCTCACTCTGACTCT +
Preference number: 4 (lower is better)
Translates to: STSSQSQSYFSFSDSVQVSTHHP*FPHSDS
Trigger: AGAGTCAGAGTGAGGGAATCAAGGGTGATGGGTGCT...AACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCTTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNSQVKF*QLFTSF
Trigger: GAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TWWVSANGNAARCFKSAEFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...CTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp GACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAAAGAGCTCCTTCAGATaGATATTGTGCTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: DLVGLSQWQRSQMFQISGKSSFR*ILCCKF
Trigger: AAACTTGCAGCACAATATCCATCTGAAGGAGCTCTT...TCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSNQNWT*WVSANG
Trigger: GCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTT...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GCACATGGGTTCCCCATGAGAAAGAGCTCCTTCAGATGGATATTGTGCTGCAAGCTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AHGFPMRKSSFRWILCCKLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...CTTGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp TTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FKSAEALQGCLQRLGLPHCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...GTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp ATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGGAATTCATGCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IHSQVKFCQLFTSCLEFMHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...CATGAATTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp GGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCATGCCTTAATCCTTTCTaGAGGCTCTATTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: GLSQWQRSQMFQISGGTSCLNPF*RLYFFT
Trigger: GGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCA...TGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp AGCTCCCAATCACAGTCCTACTTCAGCTTCTCAGATTCTGTGCAAGTTCTGAATCTCGCTGACCACCTGTaGTTACTTCTCCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: SSQSQSYFSFSDSVQVLNLADHL*LLLLPW
Trigger: CCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAG...ATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAGGACTGTGATTGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTAGTCACATCAGGGAATaGGTGCTTGCTAGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGSHIRE*VLARVY
Trigger: GTAGACCCTAGCAAGCACTCATTCCCTGATGTGACT...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAGCAGGAAGGACAAGCTaGAATGGCTTTCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQAGRTS*NGFPLI
Trigger: GATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGC...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCAGGTCCAGGATGATCTaGTTTTCGTTATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRRSRMI*FSLSFK
Trigger: TTTGAAAGATAACGAAAAGCAGATCATCCTGGACCT...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTCTAGTTTCTCCATGTaGTTGCTTCTTTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNSSFSM*LLLCFP
Trigger: GGGAAAGCAAAGAAGCAAGCACATGGAGAAACTAGA...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGGAATTCATGACAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: SQSGQVLPALHILPGIHDSQVKF*QLFTSC
Trigger: GCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...GTCATGAATTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CCA 90 bp ACCTGGTGGGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGAAGAGAAGTCAATTTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: TWWVSANGNAARCFKSAEKRSQF*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT...CTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACCCACCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGCAGCAAGGTCCAGGATaGTCTGCTTTTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGQQGPG*SAFRYL
Trigger: AAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGGATTTGAATGCTCGCTaGCCACCTGTGATTACTTCT +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGDLNAR*PPVITS
Trigger: AGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATC...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGAGTCACATCAGGGAATaGGTGCTTGCTAGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVSHIRE*VLARVY
Trigger: GTAGACCCTAGCAAGCACTCATTCCCTGATGTGACT...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGCTGCAGCTGATCCTTaGTCTCCACCACTGTGTGTC +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLAAADP*SPPLCV
Trigger: GACACACAGTGGTGGAGATCAAGGATCAGCTGCAGC...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGACGTCCATCAAAGCCTaGGTTACTTCTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGTSIKA*VTSLVF
Trigger: GAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGT...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCACCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPPVGGL*SLKRKE
Trigger: CTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGG...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGATGTGCTTGCTTCTTTaGTTTCCCCGCCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGMCLLL*FPRLNV
Trigger: GACATTAAGGCGGGGAAAGCAAAGAAGCAAGCACAT...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp AGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGGTTTCTCCATGTGCTTaGTTCTTTGCTTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: RVVFKGWVFLTWYNFGFRVSPCA*FFAFPA
Trigger: GGCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAAC...CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAATTCACCCTTCACCCCTaGTCCTCAGCGCGTCCCCGT +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQFTLHP*SSARPR
Trigger: ACGGGGACGCGCTGAGGAGCAGGGGTGAAGGGTGAA...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519595.5
CDS-3UTR GCA 90 bp TCAAGTTGGCTAAGGCTGGGAGCTGTTTTCCAGAATTTCCTTCCCTACGTGGTTATCGGGTTTCACTTCTaGAGGAAGGACAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSWLRLGAVFQNFLPYVVIGFHF*RKDKLK
Trigger: TTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...AACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIIVKGST*VPHEKE
Trigger: CTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGAC...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp GGTCTCAGCCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGATCAAAGTCCTGGGTaGTTTCACTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLSQWQRSQMFQISGGTSDQSPG*FHFLLF
Trigger: AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATC...TGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGGCTGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAATGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: YPRNNMHMVSTPTKTGPGQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...ACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCGGAATAATATGCATATaGTCTCTACACCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRGIICI*SLHQPK
Trigger: TTTTGGTTGGTGTAGAGACCATATGCATATTATTCC...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp CAGGTGGAGATGGAGAGACCAGCTTGCAGATGGTGTGAGAGAACAAAATCTGCAAGACCAGCTTGCAGATaGTGTGAGAGAACAAAATCT +
Preference number: 4 (lower is better)
Translates to: QVEMERPACRWCERTKSARPACR*CERTKS
Trigger: AGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCT...TGCAGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCTCTCCATCTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SNEIHSQVKFCQLFTSCLCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...CAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR TCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAATTGTGGTTCAATTACTaGATAGTCCTGCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQLWFNY*IVLQCL
Trigger: AAGGCATTGCAGGACTATTCAGTAATTGAACCACAA...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACCTTTTTCCTGCTCTCTaGTTTGTGGTTCAATTACTG +
Preference number: 4 (lower is better)
Translates to: FKSAEALQGCLQRLGLPHLFPAL*FVVQLL
Trigger: CAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG...GTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTTTTTCCTGCTCTCTaGTTTGTGGTTCAATTACTG +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQLFPAL*FVVQLL
Trigger: CAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ACTAAGTGCTTTCTGCAGTTTATCTTGAGACAAACCTGTGAGGCAAGTGTTATTTGCCATCAGTCGCAGTaGTGGACAGATGCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TKCFLQFILRQTCEASVICHQSQ*WTDAEG
Trigger: TCCCTCTGCATCTGTCCATCACTGCGACTGATGGCA...AATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIISQVKF*QLFTSF
Trigger: GAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AGCTCTCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTCAGCTCTTCACATCCTaGCTGGAATTCATGACACAG +
Preference number: 4 (lower is better)
Translates to: SSPMKFTVRSSFASSSHPQLFTS*LEFMTQ
Trigger: CTGTGTCATGAATTCCAGGCAGGATGTGAAGAGCTG...AGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CCA 90 bp AGAGGCAACAATTTCAGCAGCATGATAATTTCCATAGACCTCTCCACAAGCTCCTCTGGTGCCTGTAGGTaGTCTTTGCTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: RGNNFSSMIISIDLSTSSSGACR*SLLSKE
Trigger: CTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGA...GGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCATGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGCAAAACTGGACCTGGTaGGTCTCAGCCAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLQNWTW*VSANGN
Trigger: GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTG...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGAAGGACAAGCTGAAATaGCTTTCCTTTGATCATTAC +
Preference number: 4 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWKDKLK*LSFDHY
Trigger: GTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTT...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
3UTR CAA 72 bp GCTTCACTACCCAGCTCTTCCCACATTTGTGCCCAATaGCATTCCTATAACCAGTCCCTCATTCTCATCATA +
Preference number: 4 (lower is better)
Translates to: ASLPSSSHICAQ*HSYNQSLILII
Trigger: TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CAA 72 bp CCAGAATTTCCTTCCCTACGTGGTTCCTGGGTAGAGTaGACCATGAAGAAAGGTGTTATACTCAGTCATTGC +
Preference number: 4 (lower is better)
Translates to: PEFPSLRGSWVE*TMKKGVILSHC
Trigger: GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACGTAGGGAAGGAAATTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTGCCTTAATCCTTTCTaGAGGCTCTATTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGCLNPF*RLYFFT
Trigger: GGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCA...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CTTCTCAGATTCTGTGCAAGTTCTGAATTGTCTACCTGTACCAGTGCTTCTTCTCTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LLRFCASSELSTCTSASSLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...AGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGCAGCAAGGTCCAGGATaGTCTGCTTTTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVQQGPG*SAFRYL
Trigger: AAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGCTCGCTGACCACCTGTaGTTACTTCTCCTACCTTGG +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLLADHL*LLLLPW
Trigger: CCAAGGTAGGAGAAGTAATCACAGGTGGTCAGCGAG...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAACTGGAGCAGCGATATTaGCAAATAACTCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQLEQRY*QITLCL
Trigger: TAAACACAGAGTTATTTGTCAATATCGCTGCTCCAG...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGCTGGAGCAGCGATATTaGCAAATAACTCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGLEQRY*QITLCL
Trigger: TAAACACAGAGTTATTTGTCAATATCGCTGCTCCAG...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATTAAAGGACTTGCTGAAGGTCTTTACAAAGTGATTGAGCTGGAATCCAAATATCCAGCCTGCTGCAGCTaGTCCTTGATCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: IKGLAEGLYKVIELESKYPACCS*SLISTT
Trigger: AGTGGTGGAGATCAAGGATCAGCTGCAGCAGGCTGG...ATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp AGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: RVVFKGWVFLTWYNFGFRSQVKF*QLFTSF
Trigger: GAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp AGAGGCAACAATTTCAGCAGCATGATAATTTCCATAGACCTCTCCACAAGCTCCACGTCCATCAAAGCCTaGGTTACTTCTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: RGNNFSSMIISIDLSTSSTSIKA*VTSLVF
Trigger: GAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGT...GGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp GTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTCGCCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VVFKGWVFLTWYNFGFRSPVGGL*SLKRKE
Trigger: CTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGG...CGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGATGTGCTTGCTTCTTTaGTTTCCCCGCCTTAATGTC +
Preference number: 4 (lower is better)
Translates to: RVVFKGWVFLTWYNFGFRMCLLL*FPRLNV
Trigger: GACATTAAGGCGGGGAAAGCAAAGAAGCAAGCACAT...CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTCTAGTTTCTCCATGTaGTTGCTTCTTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNSSFSM*LLLVFV
Trigger: AACAAATACAAGAAGCAAGCACATGGAGAAACTAGA...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ATTAAAGGACTTGCTGAAGGTCTTTACAAAGTGATTGAGCTGGAATCCAAATATGCAGTGATGGACAGATaGAGAGGGACCCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: IKGLAEGLYKVIELESKYAVMDR*RGTQPA
Trigger: AGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGC...ATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAAGGTATCCATATACTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQRYPYT*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAGTATATGGATACCT...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522789.5
CDS-3UTR TCA 90 bp CTTCTCAGATTCTGTGCAAGTTCTGAATTGTCTACCTGTACCAGTGCTTCTTCTTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLRFCASSELSTCTSASSCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...AGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTTGCCTTAATCCTTTCTaGAGGCTCTATTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGCLNPF*RLYFFT
Trigger: GGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCA...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTTGTGGTTCAATTACTaGATAGTCCTGCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSLWFNY*IVLQCL
Trigger: AAGGCATTGCAGGACTATTCAGTAATTGAACCACAA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCTTTTTCCTGCTCTCTaGTTTGTGGTTCAATTACTG +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSLFPAL*FVVQLL
Trigger: CAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGAGTCACATCAGGGAATaGGTGCTTGCTAGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLSHIRE*VLARVY
Trigger: GTAGACCCTAGCAAGCACTCATTCCCTGATGTGACT...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCTGGAGCAGCGATATTaGCAAATAACTCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSLEQRY*QITLCL
Trigger: TAAACACAGAGTTATTTGTCAATATCGCTGCTCCAG...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: FKSAEALQGCLQRLGLPHFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...GTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTAAGAGCTCCTTCAGATaGATATTGTGCTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGKSSFR*ILCCKF
Trigger: AAACTTGCAGCACAATATCCATCTGAAGGAGCTCTT...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAGTGGGTCTCAGCCAATaGCAACGCAGCCAGATGTTT +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPVGLSQ*QRSQMF
Trigger: AAACATCTGGCTGCGTTGCCATTGGCTGAGACCCAC...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAAAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKNQNWT*WVSANG
Trigger: GCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTT...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATAAACCAAAACTGGACCTaGTGGGTCTCAGCCAATGGC +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIINQNWT*WVSANG
Trigger: GCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTT...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAAGGACAAGCTGAAATaGCTTTCCTTTGATCATTAC +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPKDKLK*LSFDHY
Trigger: GTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTT...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWHMGSP*ERAPSD
Trigger: ATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTG...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTTGCCTTAATCCTTTCTaGAGGCTCTATTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: GLSSKVGSSSLGIILGSGCLNPF*RLYFFT
Trigger: GGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCA...ACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp GGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTTTGTGGTTCAATTACTaGATAGTCCTGCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: GLSSKVGSSSLGIILGSGLWFNY*IVLQCL
Trigger: AAGGCATTGCAGGACTATTCAGTAATTGAACCACAA...ACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGCAGCAAGGTCCAGGATaGTCTGCTTTTCGTTATCTT +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLQQGPG*SAFRYL
Trigger: AAGATAACGAAAAGCAGATCATCCTGGACCTTGCTG...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACGATTTGAATGCTCGCTaGCCACCTGTGATTACTTCT +
Preference number: 4 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDDLNAR*PPVITS
Trigger: AGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATC...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp ACTAAGTGCTTTCTGCAGTTTATCTTGAGACAAACCTGTGAGGCAAGTGTTATTGCAGGAAGGACAAGCTaGAATGGCTTTCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: TKCFLQFILRQTCEASVIAGRTS*NGFPLI
Trigger: GATCAAAGGAAAGCCATTTCAGCTTGTCCTTCCTGC...AATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp ACTAAGTGCTTTCTGCAGTTTATCTTGAGACAAACCTGTGAGGCAAGTGTTATTGCTCTGAACACCACCTaGCATAGTCTGTGTGTATGT +
Preference number: 4 (lower is better)
Translates to: TKCFLQFILRQTCEASVIALNTT*HSLCVC
Trigger: ACATACACACAGACTATGTCAGGTGGTGTTCAGAGC...AATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATTGATTCCCTCACTCTaGCTCTCCTTCACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIILIPSL*LSFTAL
Trigger: CAGAGCTGTGAAGGAGAGTCAGAGTGAGGGAATCAA...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp CGTGGTTCCTGGGTAGAGTTGACCATGAAGAAAGGTGTTATACTCAGTCATTGCAGTTCTGTTGGATTATaGTATGTCAAGTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RGSWVELTMKKGVILSHCSSVGL*YVKLAK
Trigger: CTTAGCCAACTTGACATATCATAATCCAACAGAACT...GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCATTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGGAATTCATGACTTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: SQSGQVLPALHILPGIHDFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...GTCATGAATTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR GCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACACGTCCATCAAAGCCTaGGTTACTTCTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDTSIKA*VTSLVF
Trigger: GAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGT...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGATCGGGTTTCACTTCTaGAGGAAGGACAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLIGFHF*RKDKLK
Trigger: TTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGGTTTCTCCATGTGCTTaGTTCTTGTATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGVSPCA*FLYLFV
Trigger: AACAAACAAATACAAGAAGCAAGCACATGGAGAAAC...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATCTAGTTTCTCCATGTaGTTGCTTCTTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQSSFSM*LLLVFV
Trigger: AACAAATACAAGAAGCAAGCACATGGAGAAACTAGA...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TCCCTTCTAGAGCTTCACTACCCAGCTCTTCCCACATTTGTGCCCAATTGCATTTCTAGTTTCTCCATGTaGTTGCTTCTTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: SLLELHYPALPTFVPNCISSFSM*LLLVFV
Trigger: AACAAATACAAGAAGCAAGCACATGGAGAAACTAGA...AATGCAATTGGGCACAAATGTGGGAAGAGCTGGGTAGTGAAGCTCTAGAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp AATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTGCCTGGAAAAGAGCTCCTTCAGATaGATATTGTGCTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: NEIHSQVKFCQLFTSCLEKSSFR*ILCCKF
Trigger: AAACTTGCAGCACAATATCCATCTGAAGGAGCTCTT...TTCCAGGCAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CCA 90 bp CGTGGTTCCTGGGTAGAGTTGACCATGAAGAAAGGTGTTATACTCAGTCATTGCGATCAAAGTCCTGGGTaGTTTCACTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RGSWVELTMKKGVILSHCDQSPG*FHFLLF
Trigger: AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATC...GCAATGACTGAGTATAACACCTTTCTTCATGGTCAACTCTACCCAGGAACCACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTAAGAGAAGTCAATTTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIIKRSQF*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTTGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: YPRNNMHMVSTPTKTGPGWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...ACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTTACACCAACCAAAACTaGACCTGGTGGGTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSYTNQN*TWWVSA
Trigger: GGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTA...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAGGAATAATATGCATATaGTCTCTACACCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQGIICI*SLHQPK
Trigger: TTTTGGTTGGTGTAGAGACCATATGCATATTATTCC...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTGCTTTCTCTCTATGTaGAAATTAAATACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGCFLSM*KLNTVL
Trigger: CAGGACTGTATTTAATTTCCACATAGAGAGAAAGCA...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CAA 72 bp CTACTTCAGCTTCTCAGATTCTGTGCAAGTTCTGAATaGTCTACCTGTACCAGTGCTTCTTCTTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LLQLLRFCASSE*STCTSASSSNS
Trigger: AGAATTGGAAGAAGAAGCACTGGTACAGGTAGACAATTCAGAACTTGCACAGAATCTGAGAAGCTGAAGTAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGCTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTTTCCCATCTTCAGTaGTCAAAGTCCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKLSHLQ*SKSWVV
Trigger: AACCACCCAGGACTTTGATCACTGAAGATGGGAAAG...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTAGTCACATCAGGGAATaGGTGCTTGCTAGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSSHIRE*VLARVY
Trigger: GTAGACCCTAGCAAGCACTCATTCCCTGATGTGACT...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGAAATGGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLEMAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTC...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: GGTSGLSSKVGSSSLGIIFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...AATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAAATCGGGTTTCACTTCTaGAGGAAGGACAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKIGFHF*RKDKLS
Trigger: GGAAAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp TATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: YPRNNMHMVSTPTKTGPGFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...ACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: RVVFKGWVFLTWYNFGFRIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR GCA 90 bp AGAGGCAACAATTTCAGCAGCATGATAATTTCCATAGACCTCTCCACAAGCTCCATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: RGNNFSSMIISIDLSTSSIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...GGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCGTTTCTCCATGTGCTTaGTTCTTGTATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSVSPCA*FLYLFV
Trigger: AACAAACAAATACAAGAAGCAAGCACATGGAGAAAC...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTAAGAGCTCCTTCAGATaGATATTGTGCTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: YPRNNMHMVSTPTKTGPGKSSFR*ILCCKF
Trigger: AAACTTGCAGCACAATATCCATCTGAAGGAGCTCTT...ACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATAGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIIVKGST*VPHEKE
Trigger: CTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGAC...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPVKGST*VPHEKE
Trigger: CTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGAC...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATCTGGTGCCTGTAGGTaGTCTTTGCTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIISGACR*SLLSKE
Trigger: CTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGA...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTCGGATCAAAGTCCTGGGTaGTTTCACTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VVFKGWVFLTWYNFGFRSDQSPG*FHFLLF
Trigger: AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATC...CGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGTACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGTGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGCTTTCTATTTCTTGCTaGTGCAACGAGAGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWLSISC*CNESSS
Trigger: GGAGGAACTCTCGTTGCATCAGCAAGAAATAGAAAG...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTGCTCAGCTCTCCAATaGAATTCACAGTCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWCSALQ*NSQSGQ
Trigger: TTGACCTGACTGTGAATTTCATTGGAGAGCTGAGCA...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGTTGTGGTTCAATTACTaGATAGTCCTGCAATGCCTT +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLLWFNY*IVLQCL
Trigger: AAGGCATTGCAGGACTATTCAGTAATTGAACCACAA...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGCTTTTTCCTGCTCTCTaGTTTGTGGTTCAATTACTG +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLLFPAL*FVVQLL
Trigger: CAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATAGATTTGAATGCTCGCTaGCCACCTGTGATTACTTCT +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIIDLNAR*PPVITS
Trigger: AGAAGTAATCACAGGTGGTCAGCGAGCATTCAAATC...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGAAATGGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLEMAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWSQVKF*QLFTSF
Trigger: GAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGTTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGACGTCCATCAAAGCCTaGGTTACTTCTCTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWTSIKA*VTSLVF
Trigger: GAAGACAAGAGAAGTAACGCAGGCTTTGATGGACGT...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCACCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPPVGGL*SLKRKE
Trigger: CTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGG...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATACCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NTGAAILTNNSVFIPGIIPVGGL*SLKRKE
Trigger: CTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGG...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGCCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWPVGGL*SLKRKE
Trigger: CTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGG...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAAACATCAGGGAATGAGTaGTTGCTAGGGTCTACTTCT +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKTSGNE*LLGSTS
Trigger: AGAAGTAGACCCTAGCAAGCACTCATTCCCTGATGT...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAATCTGGTGCCTGTAGGTaGTCTTTGCTCTCTAAAGAG +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQSGACR*SLLSKE
Trigger: CTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGA...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ACTAAGTGCTTTCTGCAGTTTATCTTGAGACAAACCTGTGAGGCAAGTGTTATTTACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: TKCFLQFILRQTCEASVIYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...AATAACACTTGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAAGCACTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp GTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTCGGGAATAATATGCATATaGTCTCTACACCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: VVFKGWVFLTWYNFGFRSGIICI*SLHQPK
Trigger: TTTTGGTTGGTGTAGAGACCATATGCATATTATTCC...CGACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CCA 90 bp AGAGGCAACAATTTCAGCAGCATGATAATTTCCATAGACCTCTCCACAAGCTCCGAGGTTGAGTTCTGTTaGATTATGATATGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: RGNNFSSMIISIDLSTSSEVEFC*IMICQV
Trigger: AACTTGACATATCATAATCCAACAGAACTCAACCTC...GGAGCTTGTGGAGAGGTCTATGGAAATTATCATGCTGCTGAAATTGTTGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
3UTR CAA 72 bp CCAAATATAGAGTGTCTGGTTTCAAAACTCATATTCTaGCCATTATACCATGCCACCAGAGAAAGCAGACAC +
Preference number: 4 (lower is better)
Translates to: PNIECLVSKLIF*PLYHATRESRH
Trigger: GTGTCTGCTTTCTCTGGTGGCATGGTATAATGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAAGAAATGGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKEMAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTC...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAGAAATGGCTTTCCTTTaGTCATTACTCGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPEMAFL*SLLARK
Trigger: CTTACGTGCGAGTAATGATCAAAGGAAAGCCATTTC...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACAGTCAGGTCAAGTTTTaGCAGCTCTTCACATCCTTC +
Preference number: 4 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHSQVKF*QLFTSF
Trigger: GAAGGATGTGAAGAGCTGGCAAAACTTGACCTGACT...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TCCCACATTTGTGCCCAATTGCATTCCTATAACCAGTCCCTCATTCTCATCATATTCAGATGGATATTGTaGTGCAAGTTTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: SHICAQLHSYNQSLILIIFRWIL*CKFLML
Trigger: CAGCATTAAAAACTTGCAGCACAATATCCATCTGAA...TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGAGGTCCAGGATGATCTaGTTTTCGTTATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLRSRMI*FSLSFK
Trigger: TTTGAAAGATAACGAAAAGCAGATCATCCTGGACCT...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTATCGGGTTTCACTTCTaGAGGAAGGACAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSIGFHF*RKDKLK
Trigger: TTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAATCGGGTTTCACTTCTaGAGGAAGGACAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQIGFHF*RKDKLK
Trigger: TTTCAGCTTGTCCTTCCTGCAGAAGTGAAACCCGAT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAACATTTGTGCCCAATTaGATTCCTATAACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPTFVPN*IPITSP
Trigger: GGGACTGGTTATAGGAATGCAATTGGGCACAAATGT...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCATACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAATACTCGCACGTAAGTTaGTTGCACATCAACATCGAT +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKYSHVS*LHINID
Trigger: ATCGATGTTGATGTGCAACCAACTTACGTGCGAGTA...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAATGGGTCTTCCTCACTTaGTATAATTTTGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKWVFLT*YNFGFR
Trigger: CCTGAACCCAAAATTATACCAAGTGAGGAAGACCCA...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TGTGTGTATGTATTTGTCTGCTTTGTTACTACTAAATCCCTGATGAACAGAGAGGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: CVYVFVCFVTTKSLMNREVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...CTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CCA 90 bp TCCCACATTTGTGCCCAATTGCATTCCTATAACCAGTCCCTCATTCTCATCATAGGAATAATATGCATATaGTCTCTACACCAACCAAAA +
Preference number: 4 (lower is better)
Translates to: SHICAQLHSYNQSLILIIGIICI*SLHQPK
Trigger: TTTTGGTTGGTGTAGAGACCATATGCATATTATTCC...TATGATGAGAATGAGGGACTGGTTATAGGAATGCAATTGGGCACAAATGTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR TCA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCATGCCTTAATCCTTTCTaGAGGCTCTATTTCTTTACC +
Preference number: 4 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPCLNPF*RLYFFT
Trigger: GGTAAAGAAATAGAGCCTTCAGAAAGGATTAAGGCA...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR TCA 90 bp TGTGTGTATGTATTTGTCTGCTTTGTTACTACTAAATCCCTGATGAACAGAGAGCTTTTTCCTGCTCTCTaGTTTGTGGTTCAATTACTG +
Preference number: 4 (lower is better)
Translates to: CVYVFVCFVTTKSLMNRELFPAL*FVVQLL
Trigger: CAGTAATTGAACCACAAATCAGAGAGCAGGAAAAAG...CTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR GCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGAGGTCCAGGATGATCTaGTTTTCGTTATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLRSRMI*FSLSFK
Trigger: TTTGAAAGATAACGAAAAGCAGATCATCCTGGACCT...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGAAGAGCTCCTTCAGATaGATATTGTGCTGCAAGTTT +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWKSSFR*ILCCKF
Trigger: AAACTTGCAGCACAATATCCATCTGAAGGAGCTCTT...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGATCAAAGTCCTGGGTaGTTTCACTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLDQSPG*FHFLLF
Trigger: AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGAAGAGAAGTCAATTTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLKRSQF*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAGTTGTCTTCAAAGGTTaGGTCTTCCTCACTTGGTAT +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQVVFKG*VFLTWY
Trigger: ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAAC...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTTTTCATAGATTTGAATaGTCGCTGACCACCTGTGAT +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSFHRFE*SLTTCD
Trigger: ATCACAGGTGGTCAGCGAGCATTCAAATCTATGAAA...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAAGGTCCAGGATGATCTaGTTTTCGTTATCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQRSRMI*FSLSFK
Trigger: TTTGAAAGATAACGAAAAGCAGATCATCCTGGACCT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAATCCCAGGAATAATATaGATATGGTCTCTACACCAA +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQIPGII*IWSLHQ
Trigger: TTGGTGTAGAGACCATATGCATATTATTCCTGGGAT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTAGTTTCTCCATGTaGTTGCTTCTTGTATTTGTT +
Preference number: 4 (lower is better)
Translates to: AAILTNNSVFIPGIICIWSSFSM*LLLVFV
Trigger: AACAAATACAAGAAGCAAGCACATGGAGAAACTAGA...CCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACGATCAAAGTCCTGGGTaGTTTCACTTTCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHDQSPG*FHFLLF
Trigger: AAAAAGAAGAAAGTGAAACCACCCAGGACTTTGATC...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTAAGAGAAGTCAATTTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSKRSQF*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACAAGAGAAGTCAATTTTaGGCTCATTCACATTTAGGG +
Preference number: 4 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHKRSQF*AHSHLG
Trigger: CCCTAAATGTGAATGAGCCCAAAATTGACTTCTCTT...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CCA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAAAGGACAAGCTGAAATaGCTTTCCTTTGATCATTAC +
Preference number: 4 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQKDKLK*LSFDHY
Trigger: GTAATGATCAAAGGAAAGCCATTTCAGCTTGTCCTT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACGTTTCTCCATGTGCTTaGTTCTTGTATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHVSPCA*FLYLFV
Trigger: AACAAACAAATACAAGAAGCAAGCACATGGAGAAAC...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR GCA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTGTTTCTCCATGTGCTTaGTTCTTGTATTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: AILTNNSVFIPGIICIWSVSPCA*FLYLFV
Trigger: AACAAACAAATACAAGAAGCAAGCACATGGAGAAAC...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp CAGAGGCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCGCCTGTAGGTGGTCTTaGCTCTCTAAAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: QRPLGRTPITGLTHDLTVACRWS*LSKEER
Trigger: TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGC...GACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp CCATCAGTCGCAGTGATGGACAGATGCAGAGGGACCCAGCCTGCTGCAGCTGATTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: PSVAVMDRCRGTQPAAADSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...ATCAGCTGCAGCAGGCTGGGTCCCTCTGCATCTGTCCATCACTGCGACTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp GGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACATCACCGCCTGTAGGTGGTCTTaGCTCTCTAAAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: GRTPITGLTHDLTVRNITACRWS*LSKEER
Trigger: TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGC...GGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp GGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAACATCACCTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: GRTPITGLTHDLTVRNITSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...GGTGATGTTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp ATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: ISGGTSGLSSKVGSSSLGGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...ACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp GCCTCTAGGACGGACGCCCATCACTGGTCTTACCCACGACCTGACTGTCAGAAAAAAATGACACAGTCGTaGTGTTCAGCATTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: ASRTDAHHWSYPRPDCQKKMTQS*CSAFRL
Trigger: TAGACGGAATGCTGAACACAACGACTGTGTCATTTT...TTTCTGACAGTCAGGTCGTGGGTAAGACCAGTGATGGGCGTCCGTCCTAGAGGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp GTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VSNQRRHFRVVFKGWVFLGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...GAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCGCTTCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRASCIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGAAGC...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCAAAATGACACAGTCGTaGTGTTCAGCATTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRKMTQS*CSAFRL
Trigger: TAGACGGAATGCTGAACACAACGACTGTGTCATTTT...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCTCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACGCCCATGTGCTTGCTTCTaGTATTTGTTTGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: WSLHQPKLDLVGLSQWQRPCACF*YLFVLC
Trigger: GCAGAGAACAAACAAATACAAGAAGCAAGCACATGG...GCGTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTTTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: ISGGTSGLSSKVGSSSLGLLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...ACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGGAGATGGAGAGACCAGCTTGCAGATGGTGTGAGAGAACAAAATCTGCATCGTCAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTG +
Preference number: 5 (lower is better)
Translates to: WRWRDQLADGVREQNLHRQSGQV*PALHIL
Trigger: CAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...ACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCTCTCCATCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS CCA 90 bp AAGAGTTGCTACCACGAACTCCCTATAGTGGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAGCTCCTTCAGATGGATATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: KSCYHELPIVVKGST*VPHEKELLQMDIVL
Trigger: CAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CCA 90 bp CTGGAATTCATGACACAGGTGGAGATGGAGAGACCAGCTTGCAGATaGTGTGAGAGAACAAAATCTGCATCGTCCACATCAGGAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LEFMTQVEMERPACR*CERTKSASSTSGSQ
Trigger: TTGACTTCCTGATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCTCTCCATCTCCACCTGTGTCATGAATTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CAA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCACAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPQSGQV*PALHIL
Trigger: AAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAGCCTGTAGGTGGTCTTaGCTCTCTAAAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPACRWS*LSKEER
Trigger: TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGC...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAATTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQLLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGTCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: CIWSLHQPKLDLVGLSQWSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...CCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAGCTTCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQASCIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGAAGC...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAACTTTCTGCAGTTTATCTaGAGACAAACCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: YGLYTNQNWTWWVSANGNFLQFI*RQTCEA
Trigger: TGCCTCACAGGTTTGTCTCAAGATAAACTGCAGAAA...GTTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAATGTGCAAGTTCTGAATaGTCTACCTGTACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQCASSE*STCTSA
Trigger: AGCACTGGTACAGGTAGACAATTCAGAACTTGCACA...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGAGCTGGAATCCAAATATAGAGTGTCTGGTTTCAAAACTCATATTCTTGCCACCACCCACCAGGATCTaGGCCACGGACCAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: LSWNPNIECLVSKLIFLPPPTRI*ATDQKG
Trigger: ACCCTTCTGGTCCGTGGCCAAGATCCTGGTGGGTGG...TGGCAAGAATATGAGTTTTGAAACCAGACACTCTATATTTGGATTCCAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAAGGTTCCTGGGTAGAGTaGACCATGAAGAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQGSWVE*TMKKGV
Trigger: AACACCTTTCTTCATGGTCAACTCTACCCAGGAACC...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSQSGQV*PALHIL
Trigger: AAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp CCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: PGIICIWSLHQPKLDLVGQSGQV*PALHIL
Trigger: AAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...ACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp CAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATTTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: QRRHFRVVFKGWVFLTWYFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...ATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp CCAATGGCAACGCAGCCAGATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCAAAGAGAAGTCAATTTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: PMATQPDVSNQRRHFRVVKEKSI*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT...GACAACCCTGAAGTGCCTCCGCTGATTTGAAACATCTGGCTGCGTTGCCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp ATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: ICIWSLHQPKLDLVGLSQLLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...TTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS TCA 90 bp ATTCATGACACAGGTGGAGATGGAGAGACCAGCTTGCAGATGGTGTaGGAGAACAAAATCTGCATCGTCCACATCAGGAAGTCAATAGAT +
Preference number: 5 (lower is better)
Translates to: IHDTGGDGETSLQMV*ENKICIVHIRKSID
Trigger: ATCTATTGACTTCCTGATGTGGACGATGCAGATTTTGTTCTCTCACACCATCTGCAAGCTGGTCTCTCCATCTCCACCTGTGTCATGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CAA 90 bp GGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTATAATTTTGGGTTCAGGTCAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: GLSSKVGSSSLGIILGSGQSGQV*PALHIL
Trigger: AAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...ACCTGAACCCAAAATTATACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp GATGTTTCAAATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCTTAATTGTGGAAGAGTaGCTACCACGAACTCCCTAT +
Preference number: 5 (lower is better)
Translates to: DVSNQRRHFRVVFKGWVFLIVEE*LPRTPY
Trigger: ATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAA...GAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGATTTGAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp ATCAGCGGAGGCACTTCAGGGTTGTCTTCAAAGGTTGGGTCTTCCTCACTTGGTAAAGAGAAGTCAATTTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: ISGGTSGLSSKVGSSSLGKEKSI*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT...ACCAAGTGAGGAAGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCCGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGTCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCACCATGTGCTTGCTTCTaGTATTTGTTTGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPPCACF*YLFVLC
Trigger: GCAGAGAACAAACAAATACAAGAAGCAAGCACATGG...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCAAAATGACACAGTCGTaGTGTTCAGCATTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSKMTQS*CSAFRL
Trigger: TAGACGGAATGCTGAACACAACGACTGTGTCATTTT...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCATTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: NMHMVSTPTKTGPGGSQPFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...TGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCTCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCCAATGGCAAAGTTTCTCCATGTGCTaGCTTCTTGTATTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: IWSLHQPKLDLVGLSQWQSFSMC*LLVFVC
Trigger: ACAAACAAATACAAGAAGCAAGCACATGGAGAAACT...TTGCCATTGGCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AGCTCTCCAATGAAATTCACAGTCAGGTCAAGTTTTGCCAGCTCTTCACATCCTAAAATGACACAGTCGTaGTGTTCAGCATTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: SSPMKFTVRSSFASSSHPKMTQS*CSAFRL
Trigger: TAGACGGAATGCTGAACACAACGACTGTGTCATTTT...AGGATGTGAAGAGCTGGCAAAACTTGACCTGACTGTGAATTTCATTGGAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522584.5
CDS-3UTR CAA 90 bp CCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGAAAGAGAAGTCAATTTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: PRNNMHMVSTPTKTGPGGKEKSI*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT...CCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TCAAGTTGGCTAAGGCTGGGAGCTGTTTTCCAGAATTTCCTTCCCTACGTGGTTAAAGAGAAGTCAATTTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: SSWLRLGAVFQNFLPYVVKEKSI*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT...AACCACGTAGGGAAGGAAATTCTGGAAAACAGCTCCCAGCCTTAGCCAACTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACTTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDLLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAGTTTCTCCATGTGCTaGCTTCTTTGCTTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPSFSMC*LLCFPR
Trigger: GCGGGGAAAGCAAAGAAGCAAGCACATGGAGAAACT...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp TATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTTCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: YPRNNMHMVSTPTKTGPGSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...ACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATTAAAGGACTTGCTGAAGGTCTTTACAAAGTGATTGAGCTGGAATCCAAATATGGAGGCACTTCAGGGTaGTCTTCAAAGGTTGGGTCT +
Preference number: 5 (lower is better)
Translates to: IKGLAEGLYKVIELESKYGGTSG*SSKVGS
Trigger: AGACCCAACCTTTGAAGACAACCCTGAAGTGCCTCC...ATATTTGGATTCCAGCTCAATCACTTTGTAAAGACCTTCAGCAAGTCCTTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp ATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGGGTCTCAGCAGTTTCTCCATGTGCTaGCTTCTTGTATTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: IICIWSLHQPKLDLVGLSSFSMC*LLVFVC
Trigger: ACAAACAAATACAAGAAGCAAGCACATGGAGAAACT...GCTGAGACCCACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGGTGAAAGAGAAGTCAATTTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: IPGIICIWSLHQPKLDLVKEKSI*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAAATTGACTTCTCTTT...CACCAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACATAGCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDIACIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGCTAT...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCATCAGGGAATGAGTGCTaGCTAGGGTCTACTTCTAGT +
Preference number: 5 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPSGNEC*LGSTSS
Trigger: ACTAGAAGTAGACCCTAGCAAGCACTCATTCCCTGA...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGCCATGTGCTTGCTTCTaGTATTTGTTTGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLPCACF*YLFVLC
Trigger: GCAGAGAACAAACAAATACAAGAAGCAAGCACATGG...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCACAGCTCTTCCCACATTaGTGCCCAATTGCATTCCTA +
Preference number: 5 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPQLFPH*CPIAFL
Trigger: TAGGAATGCAATTGGGCACAAATGTGGGAAGAGCTG...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS CCA 90 bp TATCCTCTCCCAACACAGTTAATTCAAAAGACCAGTCCCCGTAAATaGGTCCGTATGCCATATTTCATTATGATATCCTGTCAATGTCAT +
Preference number: 5 (lower is better)
Translates to: YPLPTQLIQKTSPRK*VRMPYFIMISCQCH
Trigger: ATGACATTGACAGGATATCATAATGAAATATGGCATACGGACCCATTTACGGGGACTGGTCTTTTGAATTAACTGTGTTGGGAGAGGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518101.1
CDS-3UTR CAA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGAAAATGACACAGTCGTaGTGTTCAGCATTCCGTCTA +
Preference number: 5 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLKMTQS*CSAFRL
Trigger: TAGACGGAATGCTGAACACAACGACTGTGTCATTTT...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAGTCAGGTCAAGTTTaGCCAGCTCTTCACATCCTT +
Preference number: 5 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHQSGQV*PALHIL
Trigger: AAGGATGTGAAGAGCTGGCAAAACTTGACCTGACTG...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGTTAATTGTGGAAGAGTaGCTACCACGAACTCCCTAT +
Preference number: 5 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLLIVEE*LPRTPY
Trigger: ATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAA...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTGCCTGTAGGTGGTCTTaGCTCTCTAAAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: AILTNNSVFIPGIICIWSACRWS*LSKEER
Trigger: TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGC...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACGCCTGTAGGTGGTCTTaGCTCTCTAAAGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHACRWS*LSKEER
Trigger: TCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGC...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACTTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: VFIPGIICIWSLHQPKLDFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...GTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAATTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: NSVFIPGIICIWSLHQPKLLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...TTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATTACTCGCACGTAAGTaGGTTGCACATCAACATCGA +
Preference number: 5 (lower is better)
Translates to: NTGAAILTNNSVFIPGIILLARK*VAHQHR
Trigger: TCGATGTTGATGTGCAACCAACTTACGTGCGAGTAA...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGAGGTATCCATATACTaGGGCTCATTCACATTTAGG +
Preference number: 5 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLEVSIY*GSFTFR
Trigger: CCTAAATGTGAATGAGCCCAAGTATATGGATACCTC...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522789.5
CDS-3UTR CAA 90 bp TCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGTTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: SVFIPGIICIWSLHQPKLFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...CAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCATCACTTGGTATAATTTaGGGTTCAGGTCGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPSLGII*GSGRLL
Trigger: CAGAAGACGACCTGAACCCAAAATTATACCAAGTGA...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTGCTTCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: AILTNNSVFIPGIICIWSASCIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGAAGC...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAGCTTCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQASCIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGAAGC...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCACCATGTGCTTGCTTCTaGTATTTGTTTGTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: NNSVFIPGIICIWSLHQPPCACF*YLFVLC
Trigger: GCAGAGAACAAACAAATACAAGAAGCAAGCACATGG...TGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp TTTATCCCAGGAATAATATGCATATGGTCTCTACACCAACCAAAACTGGACCTGAGTTTCTCCATGTGCTaGCTTCTTGTATTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: FIPGIICIWSLHQPKLDLSFSMC*LLVFVC
Trigger: ACAAACAAATACAAGAAGCAAGCACATGGAGAAACT...CAGGTCCAGTTTTGGTTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAATTAATTGTGGAAGAGTaGCTACCACGAACTCCCTAT +
Preference number: 5 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQLIVEE*LPRTPY
Trigger: ATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAA...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTTTAATTGTGGAAGAGTaGCTACCACGAACTCCCTAT +
Preference number: 5 (lower is better)
Translates to: AILTNNSVFIPGIICIWSLIVEE*LPRTPY
Trigger: ATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAA...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp AACACTGGAGCAGCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: NTGAAILTNNSVFIPGIIFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...TATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGCTGCTCCAGTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp ACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACCAAATAGCTTGTATTTGTTaGTTCTCTGCTCCTGTCCGA +
Preference number: 5 (lower is better)
Translates to: TNNSVFIPGIICIWSLHQIACIC*FSAPVR
Trigger: TCGGACAGGAGCAGAGAACAAACAAATACAAGCTAT...TTGGTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250173.5
ENST00000518642.5
CDS-3UTR CAA 90 bp TGTGTGTATGTATTTGTCTGCTTTGTTACTACTAAATCCCTGATGAACAGAGAGTACATGATTTCCAAGTaGGTAGAGGTTGAGTTCTGT +
Preference number: 5 (lower is better)
Translates to: CVYVFVCFVTTKSLMNREYMISK*VEVEFC
Trigger: ACAGAACTCAACCTCTACCAACTTGGAAATCATGTA...CTCTCTGTTCATCAGGGATTTAGTAGTAACAAAGCAGACAAATACATACACACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACTTCCTGTTTCTTCCGTaGTTTTTCCATGTGTCTAAG +
Preference number: 5 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHFLFLP*FFHVSK
Trigger: CTTAGACACATGGAAAAACAACGGAAGAAACAGGAA...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000518642.5
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS-3UTR CAA 90 bp GCGATATTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTTCAAAACTCATATTCTaGCCATTATACCATGCCACC +
Preference number: 5 (lower is better)
Translates to: AILTNNSVFIPGIICIWSSKLIF*PLYHAT
Trigger: GGTGGCATGGTATAATGGCAAGAATATGAGTTTTGA...AGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAATATCGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620350.5
CDS-3UTR CAA 90 bp TTGACAAATAACTCTGTGTTTATCCCAGGAATAATATGCATATGGTCTCTACACAGTTTCTCCATGTGCTaGCTTCTTGTATTTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LTNNSVFIPGIICIWSLHSFSMC*LLVFVC
Trigger: ACAAACAAATACAAGAAGCAAGCACATGGAGAAACT...GTGTAGAGACCATATGCATATTATTCCTGGGATAAACACAGAGTTATTTGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000519595.5
ENST00000522789.5
ENST00000618342.1
ENST00000620350.5
CDS TCA 72 bp CCCTATAGTGGTCAAAGGAAGCACATGGGTTCCCCATaGGAAAGAGCTCCTTCAGATGGATATTGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: PYSGQRKHMGSP*ERAPSDGYCAA
Trigger: TGCAGCACAATATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CCA 72 bp TACCACGAACTCCCTATAGTGGTCAAAGGAAGCACATaGGTTCCCCATGAGAAAGAGCTCCTTCAGATGGAT +
Preference number: 6 (lower is better)
Translates to: YHELPIVVKGST*VPHEKELLQMD
Trigger: ATCCATCTGAAGGAGCTCTTTCTCATGGGGAACCCATGTGCTTCCTTTGACCACTATAGGGAGTTCGTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CCA 72 bp TTTGTGTTGTGTTCCTCTGTGTCTGGTGCCTGTAGGTaGTCTTTGCTCTCTAAAGAGGAAAGAGTAGCATTG +
Preference number: 6 (lower is better)
Translates to: FVLCSSVSGACR*SLLSKEERVAL
Trigger: CAATGCTACTCTTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS GCA 72 bp TGTGTTCCTCTGTGTCTGGTGCCTGTAGGTGGTCTTTaGTCTCTAAAGAGGAACTTTAATTGTGGAAGAGTT +
Preference number: 6 (lower is better)
Translates to: CVPLCLVPVGGL*SLKRNFNCGRV
Trigger: AACTCTTCCACAATTAAAGTTCCTCTTTAGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000520446.5
ENST00000523503.1
CDS CAA 90 bp TTCCAGAATTCCAAGTCATCTTCACTGTTGTCTAATTTCTTTGTGTaGTGTTCCTCTGTGTCTGGTGCCTGTAGGTGGTCTTTGCTCTCT +
Preference number: 6 (lower is better)
Translates to: FQNSKSSSLLSNFFV*CSSVSGACRWSLLS
Trigger: AGAGAGCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CAA 90 bp GCTTATTCCAGAATTCCAAGTCATCTTCACTGTTGTCTAATTTCTTaGTGTTGTGTTCCTCTGTGTCTGGTGCCTGTAGGTGGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: AYSRIPSHLHCCLIS*CCVPLCLVPVGGLC
Trigger: GCAAAGACCACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCTGGAATAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CAA 72 bp TTTCTTTACCATCCAACCACTTTAATTGTGGAAGAGTaGCTACCACGAACTCCCTATAGTGGTCAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: FLYHPTTLIVEE*LPRTPYSGQRK
Trigger: CTTCCTTTGACCACTATAGGGAGTTCGTGGTAGCAACTCTTCCACAATTAAAGTGGTTGGATGGTAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000618342.1
ENST00000620350.5
CDS CAA 72 bp AGAATTCCAAGTCATCTTCACTGTTGTCTAATTTCTTaGTGTTGTGTTCCTCTGTGTCTGGTGCCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: RIPSHLHCCLIS*CCVPLCLVPVG
Trigger: ACCTACAGGCACCAGACACAGAGGAACACAACACAAAGAAATTAGACAACAGTGAAGATGACTTGGAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000250173.5
ENST00000518642.5
ENST00000519595.5
ENST00000520446.5
ENST00000523503.1
ENST00000618342.1
ENST00000620350.5
CDS CCA 72 bp CCAACACAGTTAATTCAAAAGACCAGTCCCCGTAAATaGGTCCGTATGCCATATTTCATTATGATATCCTGT +
Preference number: 6 (lower is better)
Translates to: PTQLIQKTSPRK*VRMPYFIMISC
Trigger: ACAGGATATCATAATGAAATATGGCATACGGACCCATTTACGGGGACTGGTCTTTTGAATTAACTGTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518101.1