RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC58 (Homo sapiens)

Ensembl gene IDs: ENSG00000163428

Ensembl transcript IDs: ENST00000295628.4

Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCCAAGTTCAAGTGATTCTCTTGTCTTAGCCTCCGGAGTTAGCTaGGACTATGGGTGTGCGTCACAACGCCCGGCTAATTTTTGTATT +
Preference number: 1 (lower is better)
Translates to: LPSSSDSLVLASGVS*DYGCASQRPANFCI
Trigger: AATACAAAAATTAGCCGGGCGTTGTGACGCACACCCATAGTCCCAGCTAACTCCGGAGGCTAAGACAAGAGAATCACTTGAACTTGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CCA 90 bp AGCCTGAGGACCATAGCCAGCTGGTCCTTAATGTCAGCCAATCCCTaGCACCCTGGAATCAATGTATCATATTCACTAATCTTCCTATTG +
Preference number: 1 (lower is better)
Translates to: SLRTIASWSLMSANP*HPGINVSYSLIFLL
Trigger: CAATAGGAAGATTAGTGAATATGATACATTGATTCCAGGGTGCCAGGGATTGGCTGACATTAAGGACCAGCTGGCTATGGTCCTCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 90 bp CAGCCTAAGTCATCTTTACCTTTCATAACTGTACAGTCTGCAGCTTaGTGTGGCCCACATGGAGAAGTAAGCAAAGACTTTATACCTCTA +
Preference number: 1 (lower is better)
Translates to: QPKSSLPFITVQSAA*CGPHGEVSKDFIPL
Trigger: TAGAGGTATAAAGTCTTTGCTTACTTCTCCATGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATGAAAGGTAAAGATGACTTAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR TCA 90 bp GGTGTGTGCCACCGTGCCAAGTCTTTACTTTTAAATGTGGTAACTTaGAGCTCTAAATATCAAGAATTTTTGAACAAGAGACACTTCAGC +
Preference number: 1 (lower is better)
Translates to: GVCHRAKSLLLNVVT*SSKYQEFLNKRHFS
Trigger: GCTGAAGTGTCTCTTGTTCAAAAATTCTTGATATTTAGAGCTTCAAGTTACCACATTTAAAAGTAAAGACTTGGCACGGTGGCACACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR TCA 90 bp ATTTCTCACTTTCTCCATCTCAATGTCCAAAAGTTATACTACTCATaGCTTATTGCAGAACTGCTCTTCAAAAGGTACCATTCTGCTTTG +
Preference number: 1 (lower is better)
Translates to: ISHFLHLNVQKLYYS*LIAELLFKRYHSAL
Trigger: CAAAGCAGAATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTTTTGGACATTGAGATGGAGAAAGTGAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 90 bp CTTTCTCCATCTCAATGTCCAAAAGTTATACTACTCATGACTTATTaGAGAACTGCTCTTCAAAAGGTACCATTCTGCTTTGTGATTCAT +
Preference number: 1 (lower is better)
Translates to: LSPSQCPKVILLMTY*RTALQKVPFCFVIH
Trigger: ATGAATCACAAAGCAGAATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTTTTGGACATTGAGATGGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR TCA 90 bp TGGCCCACATGGAGAAGTAAGCAAAGACTTTATACCTCTATTTTATaGTATAATCACCTATGTATTACTCTTCTAGGCAGTAGGAACATA +
Preference number: 1 (lower is better)
Translates to: WPTWRSKQRLYTSIL*YNHLCITLLGSRNI
Trigger: TATGTTCCTACTGCCTAGAAGAGTAATACATAGGTGATTATATCATAAAATAGAGGTATAAAGTCTTTGCTTACTTCTCCATGTGGGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATTCACGCCATTCTCTTaGCTCAGCCTCCCGAGTAGC +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKFTPFS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAAGAGAATGGCGTGAA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACCATGTTGGCCAGGCTaGTCTCAAATTCCTGACTGC +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKPCWPG*SQIPDC
Trigger: GCAGTCAGGAATTTGAGACCAGCCTGGCCAACATGG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATTCCTGACTGCATATaGTCCATCCACTTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKIPDCI*SIHFGL
Trigger: GAGGCCGAAGTGGATGGATCATATGCAGTCAGGAAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACATAACTGTACAGTCTaGAGCTTGCTGTGGCCCACA +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKHNCTV*SLLWPT
Trigger: TGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATGTCAGCCAATCCCTaGCACCCTGGAATCAATGTA +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKMSANP*HPGINV
Trigger: TACATTGATTCCAGGGTGCCAGGGATTGGCTGACAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACTGGTCTCAAATTCCTaGCTGCATATGATCCATCCA +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKLVSNS*LHMIHP
Trigger: TGGATGGATCATATGCAGTCAGGAATTTGAGACCAG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGTACAGTCTGCAGCTTaGTGTGGCCCACATGGAGAA +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFVQSAA*CGPHGE
Trigger: TTCTCCATGTGGGCCACAGCAAGCTGCAGACTGTAC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGCCAGAAACTGTCTCTaGTTGGACCTATTTACATCT +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKARNCL*LDLFTS
Trigger: AGATGTAAATAGGTCCAACCAGAGACAGTTTCTGGC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGGTGATAAAGGTTTTTaGATGGTAGTCAGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKGDKGF*MVVSRP
Trigger: TGGCCTACTGACTACCATCCAAAAACCTTTATCACC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CAA 90 bp CCCTGGCACCCTGGAATCAATGTATCATATTCACTAATCTTCCTATaGCCCAGAATCTTAGCACTATTTCACCAATTCAGTTTGGTGATG +
Preference number: 2 (lower is better)
Translates to: PWHPGINVSYSLIFL*PRILALFHQFSLVM
Trigger: CATCACCAAACTGAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGATACATTGATTCCAGGGTGCCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACCATGTAACCATCTGTaGGCTTCTTTGAATAGTTCT +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKPCNHL*ASLNSS
Trigger: AGAACTATTCAAAGAAGCTCACAGATGGTTACATGG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAGTCAAGCTGGTAATTaGTTAGGAAGTAGGCATAAG +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKSQAGN*LGSRHK
Trigger: CTTATGCCTACTTCCTAATCAATTACCAGCTTGACT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATCTGCTTTTAAGAAATaGTGTGCCATGAATGCCAGA +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKSAFKK*CAMNAR
Trigger: TCTGGCATTCATGGCACACCATTTCTTAAAAGCAGA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGACTTATTGCAGAACTaGTCTTCAAAAGGTACCATT +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKDLLQN*SSKGTI
Trigger: AATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATGGGAGCTGATTATCTaGTTTCTAGATTATGAAGTC +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKWELII*FLDYEV
Trigger: GACTTCATAATCTAGAAACCAGATAATCAGCTCCCA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACATGTTAAGAGGGCCATaGGATCGGATATTAGATACA +
Preference number: 2 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYMLRGP*DRILDT
Trigger: TGTATCTAATATCCGATCTCATGGCCCTCTTAACAT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACTGGTAGAACTGGTGTaGAGTATTACAAAACATTAT +
Preference number: 2 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKLVELV*SITKHY
Trigger: ATAATGTTTTGTAATACTGCACACCAGTTCTACCAG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CAA 90 bp ATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCAGTTaGGTGATGCTGAGAGAATTGATTCTAGGGATAAAGACTACTAAG +
Preference number: 2 (lower is better)
Translates to: IFLLPRILALFHQFS*VMLRELILGIKTTK
Trigger: CTTAGTAGTCTTTATCCCTAGAATCAATTCTCTCAGCATCACCAAACTGAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCATGCAAAACTTGAGTaGAAACTGCAAACCATCAGC +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFHAKLE*KLQTIS
Trigger: GCTGATGGTTTGCAGTTTTCACTCAAGTTTTGCATG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACAACTTGAGTGAAAACTaGAAACCATCAGCCAAATGT +
Preference number: 2 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYNLSEN*KPSAKC
Trigger: ACATTTGGCTGATGGTTTGCAGTTTTCACTCAAGTT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTACTCATGACTTATTaGAGAACTGCTCTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLLMTY*RTALQK
Trigger: CTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACGGTTATAGGTTGCTCTaGCATTACTTCTTGAATACA +
Preference number: 2 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYGYRLL*HYFLNT
Trigger: TGTATTCAAGAAGTAATGCCAGAGCAACCTATAACC...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CAA 90 bp ACTTTCTCCATCTCAATGTCCAAAAGTTATACTACTCATGACTTATaGCAGAACTGCTCTTCAAAAGGTACCATTCTGCTTTGTGATTCA +
Preference number: 2 (lower is better)
Translates to: TFSISMSKSYTTHDL*QNCSSKGTILLCDS
Trigger: TGAATCACAAAGCAGAATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTTTTGGACATTGAGATGGAGAAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCAAAAGGTACCATTCTaGTTTGTGATTCATGCAAAA +
Preference number: 2 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYQKVPF*FVIHAK
Trigger: TTTTGCATGAATCACAAAGCAGAATGGTACCTTTTG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGATTCATGCAAAACTTaGGTGAAAACTGCAAACCAT +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFDSCKT*VKTANH
Trigger: ATGGTTTGCAGTTTTCACTCAAGTTTTGCATGAATC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTACCATTCTGCTTTGTaGTTCATGCAAAACTTGAGT +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFYHSAL*FMQNLS
Trigger: ACTCAAGTTTTGCATGAATCACAAAGCAGAATGGTA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCAAGTTATACTACTCATaGCTTATTGCAGAACTGCTC +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFKLYYS*LIAELL
Trigger: GAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCACCTTTCTAGGAAGCTaGAAAGGGTATGTAAGATTA +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFTFLGS*KGYVRL
Trigger: TAATCTTACATACCCTTTCCAGCTTCCTAGAAAGGT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCTCATTCTTGCTGAATaGGTAGATGAAACACAAAAT +
Preference number: 2 (lower is better)
Translates to: SYSLIFLLPRILALFHQFLILAE*VDETQN
Trigger: ATTTTGTGTTTCATCTACCCATTCAGCAAGAATGAG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CCA 72 bp AATACTGAGGACCGTAGCCTGAGGACCATAGCCAGCTaGTCCTTAATGTCAGCCAATCCCTGGCACCCTGGA +
Preference number: 3 (lower is better)
Translates to: NTEDRSLRTIAS*SLMSANPWHPG
Trigger: TCCAGGGTGCCAGGGATTGGCTGACATTAAGGACCAGCTGGCTATGGTCCTCAGGCTACGGTCCTCAGTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CCA 72 bp TCAAGTGATTCTCTTGTCTTAGCCTCCGGAGTTAGCTaGGACTATGGGTGTGCGTCACAACGCCCGGCTAAT +
Preference number: 3 (lower is better)
Translates to: SSDSLVLASGVS*DYGCASQRPAN
Trigger: ATTAGCCGGGCGTTGTGACGCACACCCATAGTCCCAGCTAACTCCGGAGGCTAAGACAAGAGAATCACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CCA 72 bp ACCATAGCCAGCTGGTCCTTAATGTCAGCCAATCCCTaGCACCCTGGAATCAATGTATCATATTCACTAATC +
Preference number: 3 (lower is better)
Translates to: TIASWSLMSANP*HPGINVSYSLI
Trigger: GATTAGTGAATATGATACATTGATTCCAGGGTGCCAGGGATTGGCTGACATTAAGGACCAGCTGGCTATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 72 bp TCATCTTTACCTTTCATAACTGTACAGTCTGCAGCTTaGTGTGGCCCACATGGAGAAGTAAGCAAAGACTTT +
Preference number: 3 (lower is better)
Translates to: SSLPFITVQSAA*CGPHGEVSKDF
Trigger: AAAGTCTTTGCTTACTTCTCCATGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATGAAAGGTAAAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CCA 72 bp TTTACCTTTCATAACTGTACAGTCTGCAGCTTGCTGTaGCCCACATGGAGAAGTAAGCAAAGACTTTATACC +
Preference number: 3 (lower is better)
Translates to: FTFHNCTVCSLL*PTWRSKQRLYT
Trigger: GGTATAAAGTCTTTGCTTACTTCTCCATGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATGAAAGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGTTTGTCAGAAAGGTTaGTCCCATGTAACCATCTGT +
Preference number: 3 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKVCQKG*SHVTIC
Trigger: ACAGATGGTTACATGGGACAAACCTTTCTGACAAAC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATTTCACCAATTCAGTTaGGTGATGCTGAGAGAATTG +
Preference number: 3 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKFHQFS*VMLREL
Trigger: CAATTCTCTCAGCATCACCAAACTGAATTGGTGAAA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAACTACTCATGACTTATaGCAGAACTGCTCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKTTHDL*QNCSSK
Trigger: TTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACATGTCAGGTTATAGGTaGCTCTGGCATTACTTCTTG +
Preference number: 3 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYMSGYR*LWHYFL
Trigger: CAAGAAGTAATGCCAGAGCAACCTATAACCTGACAT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR TCA 72 bp AAAGGTACCATTCTGCTTTGTGATTCATGCAAAACTTaGGTGAAAACTGCAAACCATCAGCCAAATGTGAAA +
Preference number: 3 (lower is better)
Translates to: KGTILLCDSCKT*VKTANHQPNVK
Trigger: TTTCACATTTGGCTGATGGTTTGCAGTTTTCACTCAAGTTTTGCATGAATCACAAAGCAGAATGGTACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR TCA 72 bp TGTGCCATGAATGCCAGAAATCAGAAAAGGTACACCTaGTGTTCTAATGCCTATCTGATCTGTATAACATTT +
Preference number: 3 (lower is better)
Translates to: CAMNARNQKRYT*CSNAYLICITF
Trigger: AAATGTTATACAGATCAGATAGGCATTAGAACATCAGGTGTACCTTTTCTGATTTCTGGCATTCATGGCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCAGAAACTGTCTCTGGTaGGACCTATTTACATCTGTA +
Preference number: 3 (lower is better)
Translates to: SYSLIFLLPRILALFHQFRNCLW*DLFTSV
Trigger: TACAGATGTAAATAGGTCCAACCAGAGACAGTTTCT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 72 bp TCCAAAAGTTATACTACTCATGACTTATTGCAGAACTaGTCTTCAAAAGGTACCATTCTGCTTTGTGATTCA +
Preference number: 3 (lower is better)
Translates to: SKSYTTHDLLQN*SSKGTILLCDS
Trigger: TGAATCACAAAGCAGAATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTTTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 72 bp TCTCAATGTCCAAAAGTTATACTACTCATGACTTATTaGAGAACTGCTCTTCAAAAGGTACCATTCTGCTTT +
Preference number: 3 (lower is better)
Translates to: SQCPKVILLMTY*RTALQKVPFCF
Trigger: AAAGCAGAATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTTTTGGACATTGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR GCA 72 bp TTACCTAGTTCTGTTAAAGAATATTTTACAATGTTCTaGATGGTATGTCAGGTTATAGGTTGCTCTGGCATT +
Preference number: 3 (lower is better)
Translates to: LPSSVKEYFTMF*MVCQVIGCSGI
Trigger: AATGCCAGAGCAACCTATAACCTGACATACCATGCAGAACATTGTAAAATATTCTTTAACAGAACTAGGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAACTGGGCCAGGCCCTTaGGCAGCGCACTGGGCCCGC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKTGPGP*AAHWAR
Trigger: GCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACCTTGGGCAGCGCACTaGGCCCGCCGAGCCGGTTGT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKPWAAH*ARRAGC
Trigger: ACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCCACCGCACGGCGCGTaGCGCCGGATTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYPPHGA*RRIPQS
Trigger: GCTCTGGGGAATCCGGCGCCACGCGCCGTGCGGTGG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGCGCGGTCAACGCGTTaGCGCTCACGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKARSTR*RSRPAA
Trigger: AGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACGAGCCGGTTGTTCTTaGCCAGCAGCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKRAGCS*PAACAG
Trigger: GCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACAGAGGCCGGGAGCTCTaGGGCGCCCCGGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYRGREL*GAPEPE
Trigger: TTCAGGTTCCGGGGCGCCGCAGAGCTCCCGGCCTCT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTCTTGGCCAGCAGCGTaGGCAGGCCGCGCAGAGCGA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYSWPAA*AGRAER
Trigger: TCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCGGCAGAGCGGCGACTaGGCCAGGCCCTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFRQSGD*ARPLGS
Trigger: GCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGGGATGCTCTGCAGTTaGTTGCCGCCCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKGMLCS*LPPRLR
Trigger: CCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACGACACCAGACGGTTGTaGGGCAGCAGCAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYDTRRL*GSSSRS
Trigger: GCTGCGGCTGCTGCTGCCTCACAACCGTCTGGTGTC...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATGCTCTGCAGTTGGTTaGCGCCCAGGCTCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKCSAVG*RPGSGS
Trigger: AGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTGAGGTTGAGCACCTaGAGGCTGCGGCAGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLRLST*RLRQSG
Trigger: GCCGCTCTGCCGCAGCCTCCAGGTGCTCAACCTCAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGAGGCAGGCACCTCCTaGAAACAGTTGCCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKEAGTS*KQLPLR
Trigger: CCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATGGGAAGTGGAGCTGTaGGAGGCAGAACTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKWEVEL*EAELQG
Trigger: CCCTTGCAGTTCTGCCTCTCACAGCTCCACTTCCCA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGGCCGTGACCACCGCTaGTCCGGCCTCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFGRDHR*SGLLHP
Trigger: AGGATGGAGGAGGCCGGAGCAGCGGTGGTCACGGCC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACTCTGCCTCCCAAAGTaGCAGGATTACTGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKLCLPK*QDYWRE
Trigger: CTCACGCCAGTAATCCTGGCACTTTGGGAGGCAGAG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCTCACGTCCAGCAGCTaGAGGTGCGGGAAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFLTSSS*RCGKPL
Trigger: CAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTCAGCCGGGATGCTCTaGAGTTGGTTGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFSAGML*SWLPPR
Trigger: CCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGACTCCTCCACACTTTaGGTTTGGGCAATTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKDSSTL*VWAIAG
Trigger: GCCAGCAATTGCCCAAACCCAAAGTGTGGAGGAGTC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGTCTGCAGCTTGCTGTaGCCCACATGGAGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKVCSLL*PTWRSK
Trigger: CTTACTTCTCCATGTGGGCCACAGCAAGCTGCAGAC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTCTCGGTGGACACGCTaGGGCGGGACCAGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFSRWTR*GGTSSV
Trigger: AACTGAACTGGTCCCGCCTCAGCGTGTCCACCGAGA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCGATCTCAGCCGGGATaGTCTGCAGTTGGTTGCCGC +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFRSQPG*SAVGCR
Trigger: GCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTCTCCCAGGCTGGAGTaGAATGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYSPRLE*NGMISA
Trigger: AGCCGAGATCATGCCATTGCACTCCAGCCTGGGAGA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATGGGCAATTGCTGGCTaGACCCAAGTATCTAAGAAG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKWAIAG*TQVSKK
Trigger: CTTCTTAGATACTTGGGTTCAGCCAGCAATTGCCCA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCTGATCTCGAACCCCTaGCCTCAGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFLISNP*PQVICL
Trigger: CAGGCAGATCACCTGAGGTCAGGGGTTCGAGATCAG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCCATGTTGGCCAGGCTaGTCTCAAATTCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYPCWPG*SQIPDC
Trigger: GCAGTCAGGAATTTGAGACCAGCCTGGCCAACATGG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CAA 72 bp GTCATCTTTACCTTTCATAACTGTACAGTCTGCAGCTaGCTGTGGCCCACATGGAGAAGTAAGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: VIFTFHNCTVCS*LWPTWRSKQRL
Trigger: AAGTCTTTGCTTACTTCTCCATGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATGAAAGGTAAAGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAATCTCCCAAGTTCAAGTaGTTCTCTTGTCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKSPKFK*FSCLSL
Trigger: GAGGCTAAGACAAGAGAATCACTTGAACTTGGGAGA...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACCAAGAAGAACTTTCTaGATTCTGCGTGCAGCAACA +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKPRRTF*ILRAAT
Trigger: TGTTGCTGCACGCAGAATGCAGAAAGTTCTTCTTGG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCATAACTGTACAGTCTaGAGCTTGCTGTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYHNCTV*SLLWPT
Trigger: TGTGGGCCACAGCAAGCTGCAGACTGTACAGTTATG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGTGATCTCAGATTACTaGAACCTCTGTCTCCCAAGT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKVISDY*NLCLPS
Trigger: ACTTGGGAGACAGAGGTTGCAGTAATCTGAGATCAC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGATCGTATTACTTGCTaGCCCTTAATTACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKDRITC*PLITEG
Trigger: TCCCTCCGTAATTAAGGGCCAGCAAGTAATACGATC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATTACTTTCTCCCTTTaGGAAGAGCAAGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKITFSL*EEQGWL
Trigger: CAGCCAACCTTGCTCTTCCCAAAGGGAGAAAGTAAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGTCAGCAAGTTATTGTaGAGACTTAGGGAACGAAGT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKVSKLL*RLRERS
Trigger: ACTTCGTTCCCTAAGTCTTCACAATAACTTGCTGAC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAAACACTCTAAACTCTaGAAGTTCTCGATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKKHSKL*KFSISA
Trigger: GGCTGAGATCGAGAACTTGCAGAGTTTAGAGTGTTT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAAGATTATAGGTGTGTaGCACCGTGCCAAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKKIIGV*HRAKSL
Trigger: TAAAGACTTGGCACGGTGGCACACACCTATAATCTT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTCACTCAGGCTGGAGTaGAGCGGAGTGATCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFSLRLE*SGVISD
Trigger: ATCTGAGATCACTCCGCTGCACTCCAGCCTGAGTGA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGAAGATCGTATTACTTaGTGGCCCTTAATTACGGAG +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKEDRIT*WPLITE
Trigger: CTCCGTAATTAAGGGCCAGCAAGTAATACGATCTTC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACATGTCAGCCAATCCCTaGCACCCTGGAATCAATGTA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYMSANP*HPGINV
Trigger: TACATTGATTCCAGGGTGCCAGGGATTGGCTGACAT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACAGGACCATAGCCAGCTaGTCCTTAATGTCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYRTIAS*SLMSAN
Trigger: ATTGGCTGACATTAAGGACCAGCTGGCTATGGTCCT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACGGAAGAACATTCTGGTaGACACAAGTAGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYGRTFW*TQVVHQ
Trigger: CTGATGCACTACTTGTGTTCACCAGAATGTTCTTCC...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATGTTAAGAGGGCCATaGGATCGGATATTAGATACA +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKMLRGP*DRILDT
Trigger: TGTATCTAATATCCGATCTCATGGCCCTCTTAACAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTTTCTGCATTCTGCGTaGAGCAACACTAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYFLHSA*SNTSFI
Trigger: GATGAAGCTAGTGTTGCTGCACGCAGAATGCAGAAA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATGGTGTGCCATGAATaGCAGAAATCAGAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKMVCHE*QKSEKV
Trigger: TACCTTTTCTGATTTCTGGCATTCATGGCACACCAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAAGTTATACTACTCATaGCTTATTGCAGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKKLYYS*LIAELL
Trigger: GAGCAGTTCTGCAATAAGTCATGAGTAGTATAACTT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAACTTGAGTGAAAACTaGAAACCATCAGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKNLSEN*KPSAKC
Trigger: ACATTTGGCTGATGGTTTGCAGTTTTCACTCAAGTT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACATAACCAGTCGCCTTTaGATTTACCTCCACTACTCA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYITSRL*IYLHYS
Trigger: TGAGTAGTGGAGGTAAATCCAAAGGCGACTGGTTAT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTGTAACTGTGAAAGTTaGGGAGGTATGCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYCNCES*GGMLWI
Trigger: AATCCAAAGCATACCTCCTCAACTTTCACAGTTACA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTCAACTCTTCCAAATaGATAAGGTTGAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLNSSK*IRLRIS
Trigger: AGAGATCCTCAACCTTATTCATTTGGAAGAGTTGAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCACTAGCTTCATCTTCTaGGTCAGATTCACTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFTSFIF*VRFTLG
Trigger: TCCCAGAGTGAATCTGACTCAGAAGATGAAGCTAGT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACAGTCAAGCTGGTAATTaGTTAGGAAGTAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYSQAGN*LGSRHK
Trigger: CTTATGCCTACTTCCTAATCAATTACCAGCTTGACT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTATTTCACAACACTGTaGACTCCTGTTCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYYFTTL*TPVQPR
Trigger: TCTTGGTTGAACAGGAGTGCACAGTGTTGTGAAATA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTTGCTGTGGCCCACATaGAGAAGTAAGCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFLLWPT*RSKQRL
Trigger: AAGTCTTTGCTTACTTCTCCATGTGGGCCACAGCAA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
3UTR CAA 72 bp TTGCCCAGAATCTTAGCACTATTTCACCAATTCAGTTaGGTGATGCTGAGAGAATTGATTCTAGGGATAAAG +
Preference number: 4 (lower is better)
Translates to: LPRILALFHQFS*VMLRELILGIK
Trigger: CTTTATCCCTAGAATCAATTCTCTCAGCATCACCAAACTGAATTGGTGAAATAGTGCTAAGATTCTGGGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTTCCTGACCACAACTaGAATCATGATACCTTTAAA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLPDHN*NHDTFK
Trigger: TTTAAAGGTATCATGATTTCAGTTGTGGTCAGGAAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACACCTTTCTAGGAAGCTaGAAAGGGTATGTAAGATTA +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYTFLGS*KGYVRL
Trigger: TAATCTTACATACCCTTTCCAGCTTCCTAGAAAGGT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGCCAGAAACTGTCTCTaGTTGGACCTATTTACATCT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFARNCL*LDLFTS
Trigger: AGATGTAAATAGGTCCAACCAGAGACAGTTTCTGGC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTGGGAGCTGATTATCTaGTTTCTAGATTATGAAGTC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYWELII*FLDYEV
Trigger: GACTTCATAATCTAGAAACCAGATAATCAGCTCCCA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTATTGTTAAGTACCTaGCACAACTTAAAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLLLST*HNLKAH
Trigger: GTGAGCTTTTAAGTTGTGCCAGGTACTTAACAATAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCCATGTAACCATCTGTaGGCTTCTTTGAATAGTTCT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFPCNHL*ASLNSS
Trigger: AGAACTATTCAAAGAAGCTCACAGATGGTTACATGG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCAGAAATGGTGTGCCATaGATGCCAGAAATCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFRNGVP*MPEIRK
Trigger: TTTTCTGATTTCTGGCATTCATGGCACACCATTTCT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTGGTAGAACTGGTGTaGAGTATTACAAAACATTAT +
Preference number: 4 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLVELV*SITKHY
Trigger: ATAATGTTTTGTAATACTGCACACCAGTTCTACCAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTCTGCTTTTAAGAAATaGTGTGCCATGAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFSAFKK*CAMNAR
Trigger: TCTGGCATTCATGGCACACCATTTCTTAAAAGCAGA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGTTAGCTACATGACTTaGGAGCTGATTATCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFVSYMT*ELIIWF
Trigger: AAACCAGATAATCAGCTCCCAAGTCATGTAGCTAAC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR TCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCCCAATAGCAAACACTaGACAAATTTGGTGATAAAG +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFPNSKH*TNLVIK
Trigger: CTTTATCACCAAATTTGTTCAGTGTTTGCTATTGGG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR GCA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGACTTATTGCAGAACTaGTCTTCAAAAGGTACCATT +
Preference number: 4 (lower is better)
Translates to: SYSLIFLLPRILALFHQFDLLQN*SSKGTI
Trigger: AATGGTACCTTTTGAAGAGCAGTTCTGCAATAAGTC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp CCACCGCTGCTCCGGCCTCCTCCATCCTGGCCACCGCACGGCGCGTaGCGCCGGATTCCCCAGAGCGCCGCGCGCGGTCCAGAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PPLLRPPPSWPPHGA*RRIPQSAARGPEAG
Trigger: CCCGGCCTCTGGACCGCGCGCGGCGCTCTGGGGAATCCGGCGCCACGCGCCGTGCGGTGGCCAGGATGGAGGAGGCCGGAGCAGCGGTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp GAGGCGGGACCAGTTCAGTTCGGCCTCCCCGGCCGTGACCACCGCTaGTCCGGCCTCCTCCATCCTGGCCACCGCACGGCGCGTGGCGCC +
Preference number: 5 (lower is better)
Translates to: EAGPVQFGLPGRDHR*SGLLHPGHRTARGA
Trigger: GGCGCCACGCGCCGTGCGGTGGCCAGGATGGAGGAGGCCGGAGCAGCGGTGGTCACGGCCGGGGAGGCCGAACTGAACTGGTCCCGCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp GCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTTGGCCAGCAGCGTaGGCAGGCCGCGCAGAGCGAGCAGCTCCGGCCCGAGCGCGGTCA +
Preference number: 5 (lower is better)
Translates to: AAHWARRAGCSWPAA*AGRAERAAPARARS
Trigger: TGACCGCGCTCGGGCCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp CCAGGCCCTTGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTTaGCCAGCAGCGTGCGCAGGCCGCGCAGAGCGAGCAGCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: PGPWAAHWARRAGCS*PAACAGRAERAAPA
Trigger: GGCCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp GGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTTGGGCAGCGCACTaGGCCCGCCGAGCCGGTTGTTCTTGGCCAGCAGCGTGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: GCGRAATGPGPWAAH*ARRAGCSWPAACAG
Trigger: GCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp GGCCGCGCAGAGCGAGCAGCTCCGGCCCGAGCGCGGTCAACGCGTTaGCGCTCACGTCCAGCAGCTGGAGGTGCGGGAAGCCGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: GRAERAAPARARSTR*RSRPAAGGAGSRCP
Trigger: TGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGGCCGGAGCTGCTCGCTCTGCGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp TCCGGCCCGAGCGCGGTCAACGCGTTGCCGCTCACGTCCAGCAGCTaGAGGTGCGGGAAGCCGCTGCCCAGCGCCCGTGGCAGCGACACC +
Preference number: 5 (lower is better)
Translates to: SGPSAVNALPLTSSS*RCGKPLPSARGSDT
Trigger: GGTGTCGCTGCCACGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGGCCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp CCGAGCGCGGTCAACGCGTTGCCGCTCACGTCCAGCAGCTGGAGGTaGGGGAAGCCGCTGCCCAGCGCCCGTGGCAGCGACACCAGACGG +
Preference number: 5 (lower is better)
Translates to: PSAVNALPLTSSSWR*GKPLPSARGSDTRR
Trigger: CCGTCTGGTGTCGCTGCCACGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp ACGCGTTGCCGCTCACGTCCAGCAGCTGGAGGTGCGGGAAGCCGCTaGCCAGCGCCCGTGGCAGCGACACCAGACGGTTGTGAGGCAGCA +
Preference number: 5 (lower is better)
Translates to: TRCRSRPAAGGAGSR*PAPVAATPDGCEAA
Trigger: TGCTGCCTCACAACCGTCTGGTGTCGCTGCCACGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp TCAGCCGGGATGCTCTGCAGTTGGTTGCCGCCCAGGCTCAGGGTCTaGAGCGCGCGCAGCTCTAAGAGCGAGGCAGGCACCTCCTGGAAA +
Preference number: 5 (lower is better)
Translates to: SAGMLCSWLPPRLRV*SARSSKSEAGTSWK
Trigger: TTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp AGGGTCTGCAGCGCGCGCAGCTCTAAGAGCGAGGCAGGCACCTCCTaGAAACAGTTGCCGCTGAGGTTGAGCACCTGGAGGCTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RVCSARSSKSEAGTS*KQLPLRLSTWRLRQ
Trigger: CTGCCGCAGCCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCTGCGCGCGCTGCAGACCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp AACTCTGCAAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTGGTTaGCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGCTCTAAGAGCG +
Preference number: 5 (lower is better)
Translates to: NSASSRSQPGCSAVG*RPGSGSAARAALRA
Trigger: CGCTCTTAGAGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp AAACACTCTAAACTCTGCAAGTTCTCGATCTCAGCCGGGATGCTCTaGAGTTGGTTGCCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGC +
Preference number: 5 (lower is better)
Translates to: KHSKLCKFSISAGML*SWLPPRLRVCSARS
Trigger: GCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTTAGAGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 90 bp TCTAAACTCTGCAAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTaGTTGCCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: SKLCKFSISAGMLCS*LPPRLRVCSARSSK
Trigger: CTTAGAGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 90 bp GATATAAACACTCTAAACTCTGCAAGTTCTCGATCTCAGCCGGGATaGTCTGCAGTTGGTTGCCGCCCAGGCTCAGGGTCTGCAGCGCGC +
Preference number: 5 (lower is better)
Translates to: DINTLNSASSRSQPG*SAVGCRPGSGSAAR
Trigger: GCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTTAGAGTGTTTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGGCCCGCCGAGCCGGTaGTTCTTGGCCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKGPPSR*FLASSV
Trigger: CACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAGCGCGGTCAACGCGTaGCCGCTCACGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKSAVNA*PLTSSS
Trigger: GCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCGACTGGGCCAGGCCCTaGGGCAGCGCACTGGGCCCG +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFDWARP*GSALGP
Trigger: CGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTC...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAACGGGATGCTCTGCAGTaGGTTGCCGCCCAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKRDALQ*VAAQAQ
Trigger: CTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCG...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 90 bp AGTGGAGCTGTGAGAGGCAGAACTGCAAGGGGAAGAACATTCTGGTaGACACAAGTAGTGCATCAGTGGGAGGCGATACTTCCCACAGAA +
Preference number: 5 (lower is better)
Translates to: SGAVRGRTARGRTFW*TQVVHQWEAILPTE
Trigger: TTCTGTGGGAAGTATCGCCTCCCACTGATGCACTACTTGTGTTCACCAGAATGTTCTTCCCCTTGCAGTTCTGCCTCTCACAGCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCCGAGCCGGTTGTTCTaGGCCAGCAGCGTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYPSRLF*ASSVRR
Trigger: CCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAATGCTCTGCAGTTGGTaGCCGCCCAGGCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKMLCSW*PPRLRV
Trigger: GACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCAT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCCAGTTGCCGCTGAGGTaGAGCACCTGGAGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFQLPLR*STWRLR
Trigger: CCGCAGCCTCCAGGTGCTCAACCTCAGCGGCAACTG...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 90 bp GTCAAAGTAGACTCCTCCACACTTTGGGTTTGGGCAATTGCTGGCTaGACCCAAGTATCTAAGAAGATTTCCAGGAAGATCATAGGGAGT +
Preference number: 5 (lower is better)
Translates to: VKVDSSTLWVWAIAG*TQVSKKISRKIIGS
Trigger: ACTCCCTATGATCTTCCTGGAAATCTTCTTAGATACTTGGGTTCAGCCAGCAATTGCCCAAACCCAAAGTGTGGAGGAGTCTACTTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTGTACAGTCTGCAGCTaGCTGTGGCCCACATGGAGA +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYCTVCS*LWPTWR
Trigger: TCTCCATGTGGGCCACAGCAAGCTGCAGACTGTACA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCACCTCCTGGAAACAGTaGCCGCTGAGGTTGAGCACC +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFTSWKQ*PLRLST
Trigger: GGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGT...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACCTCCACACTTTGGGTTaGGGCAATTGCTGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYLHTLG*GNCWLN
Trigger: GTTCAGCCAGCAATTGCCCAAACCCAAAGTGTGGAG...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACACTGTCCCTAGGTGTTaGGTGACTTCTCTTCTAGCC +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYTVPRC*VTSLLA
Trigger: GGCTAGAAGAGAAGTCACCAAACACCTAGGGACAGT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAAGAAGATCGTATTACTaGCTGGCCCTTAATTACGGA +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKRRSYY*LALNYG
Trigger: TCCGTAATTAAGGGCCAGCAAGTAATACGATCTTCT...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTATAACCAGTCGCCTTaGGATTTACCTCCACTACTC +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYYNQSP*DLPPLL
Trigger: GAGTAGTGGAGGTAAATCCAAAGGCGACTGGTTATA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTGTGATTTTGCCATGTaGGCCAGGCTGATCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFCDFAM*ARLISN
Trigger: GTTCGAGATCAGCCTGGCCAACATGGCAAAATCACA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 90 bp AAACGAACAACCAATGGATTTCCTCGTAAACTCAACTCTTCCAAATaGATAAGGTTGAGGATCTCTCGAGGCAGATATGTCAGCAAGTTA +
Preference number: 5 (lower is better)
Translates to: KRTTNGFPRKLNSSK*IRLRISRGRYVSKL
Trigger: TAACTTGCTGACATATCTGCCTCGAGAGATCCTCAACCTTATTCATTTGGAAGAGTTGAGTTTACGAGGAAATCCATTGGTTGTTCGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTTTGGGTTTGGGCAATaGCTGGCTGAACCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFFGFGQ*LAEPKY
Trigger: ATACTTGGGTTCAGCCAGCAATTGCCCAAACCCAAA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp ATTACTTGCTGGCCCTTAATTACGGAGGGATATGGACAATCTCCCAATAGCAAAGTCCACAAATTTAATTaGTCTGACACAGCAGTCAAA +
Preference number: 5 (lower is better)
Translates to: ITCWPLITEGYGQSPNSKVHKFN*SDTAVK
Trigger: TTTGACTGCTGTGTCAGACAAATTAAATTTGTGGAC...TTTGCTATTGGGAGATTGTCCATATCCCTCCGTAATTAAGGGCCAGCAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACAGAAACTGTCTCTGGTaGGACCTATTTACATCTGTA +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYRNCLW*DLFTSV
Trigger: TACAGATGTAAATAGGTCCAACCAGAGACAGTTTCT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACTTTCACCAATTCAGTTaGGTGATGCTGAGAGAATTG +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYFHQFS*VMLREL
Trigger: CAATTCTCTCAGCATCACCAAACTGAATTGGTGAAA...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp CAATCTGCTTTTAAGAAATGGTGTGCCATGAATGCCAGAAATCAGAAAAGGTACACTACTCATGACTTATaGCAGAACTGCTCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: QSAFKKWCAMNARNQKRYTTHDL*QNCSSK
Trigger: TTTTGAAGAGCAGTTCTGCAATAAGTCATGAGTAGT...GTACCTTTTCTGATTTCTGGCATTCATGGCACACCATTTCTTAAAAGCAGATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS-3UTR CAA 90 bp TCATATTCACTAATCTTCCTATTGCCCAGAATCTTAGCACTATTTCACCAATTCTCACTAATCTTCCTATaGCCCAGAATCTTAGCACTA +
Preference number: 5 (lower is better)
Translates to: SYSLIFLLPRILALFHQFSLIFL*PRILAL
Trigger: TAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGA...GAATTGGTGAAATAGTGCTAAGATTCTGGGCAATAGGAAGATTAGTGAATATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp CTCCGGCCTCCTCCATCCTGGCCACCGCACGGCGCGTaGCGCCGGATTCCCCAGAGCGCCGCGCGCGGTCCA +
Preference number: 6 (lower is better)
Translates to: LRPPPSWPPHGA*RRIPQSAARGP
Trigger: TGGACCGCGCGCGGCGCTCTGGGGAATCCGGCGCCACGCGCCGTGCGGTGGCCAGGATGGAGGAGGCCGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp GCCAGGCCCTTGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTaGGCCAGCAGCGTGCGCAGGCCGCGCAGAGCGAGCAGCTCCGGC +
Preference number: 6 (lower is better)
Translates to: ARPLGSALGPPSRLF*ASSVRRPRRASSSG
Trigger: GCCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp CCAGAGCGCCGCGCGCGGTCCAGAGGCCGGGAGCTCTaGGGCGCCCCGGAACCTGAACCGAGGGCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: PERRARSRGREL*GAPEPEPRAES
Trigger: CGACTCAGCCCTCGGTTCAGGTTCCGGGGCGCCGCAGAGCTCCCGGCCTCTGGACCGCGCGCGGCGCTCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp TGGGCCCGCCGAGCCGGTTGTTCTTGGCCAGCAGCGTaGGCAGGCCGCGCAGAGCGAGCAGCTCCGGCCCGA +
Preference number: 6 (lower is better)
Translates to: WARRAGCSWPAA*AGRAERAAPAR
Trigger: TCGGGCCGGAGCTGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp GGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTTaGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: GGCGRAATGPGP*AAHWARRAGCS
Trigger: AGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp TGGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTaGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTC +
Preference number: 6 (lower is better)
Translates to: WRLRQSGDWARP*GSALGPPSRLF
Trigger: GAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp AGGCCGCGCAGAGCGAGCAGCTCCGGCCCGAGCGCGGTCAACGCGTaGCCGCTCACGTCCAGCAGCTGGAGGTGCGGGAAGCCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RPRRASSSGPSAVNA*PLTSSSWRCGKPLP
Trigger: GGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGGCCGGAGCTGCTCGCTCTGCGCGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp CCAGTTCAGTTCGGCCTCCCCGGCCGTGACCACCGCTaGTCCGGCCTCCTCCATCCTGGCCACCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: PVQFGLPGRDHR*SGLLHPGHRTA
Trigger: CGCCGTGCGGTGGCCAGGATGGAGGAGGCCGGAGCAGCGGTGGTCACGGCCGGGGAGGCCGAACTGAACTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp AGCGCGGTCAACGCGTTGCCGCTCACGTCCAGCAGCTaGAGGTGCGGGAAGCCGCTGCCCAGCGCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: SAVNALPLTSSS*RCGKPLPSARG
Trigger: GCCACGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp TGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTTaGCCAGCAGCGTGCGCAGGCCGCGCAGAGCGAGCA +
Preference number: 6 (lower is better)
Translates to: WAAHWARRAGCS*PAACAGRAERA
Trigger: TGCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp AGAGCGGCGACTGGGCCAGGCCCTTGGGCAGCGCACTaGGCCCGCCGAGCCGGTTGTTCTTGGCCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: RAATGPGPWAAH*ARRAGCSWPAA
Trigger: CGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp TTGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTaGGCCAGCAGCGTGCGCAGGCCGCGCAGAGCGAGC +
Preference number: 6 (lower is better)
Translates to: LGSALGPPSRLF*ASSVRRPRRAS
Trigger: GCTCGCTCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp AGGCCCTTGGGCAGCGCACTGGGCCCGCCGAGCCGGTaGTTCTTGGCCAGCAGCGTGCGCAGGCCGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RPLGSALGPPSR*FLASSVRRPRR
Trigger: TCTGCGCGGCCTGCGCACGCTGCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp TTGAGCACCTGGAGGCTGCGGCAGAGCGGCGACTGGGCCAGGCCCTaGGGCAGCGCACTGGGCCCGCCGAGCCGGTTGTTCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LSTWRLRQSGDWARP*GSALGPPSRLFLAS
Trigger: GCTGGCCAAGAACAACCGGCTCGGCGGGCCCAGTGCGCTGCCCAAGGGCCTGGCCCAGTCGCCGCTCTGCCGCAGCCTCCAGGTGCTCAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp GTCAACGCGTTGCCGCTCACGTCCAGCAGCTGGAGGTaGGGGAAGCCGCTGCCCAGCGCCCGTGGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: VNALPLTSSSWR*GKPLPSARGSD
Trigger: GTCGCTGCCACGGGCGCTGGGCAGCGGCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp GAGCGAGCAGCTCCGGCCCGAGCGCGGTCAACGCGTTaGCGCTCACGTCCAGCAGCTGGAGGTGCGGGAAGC +
Preference number: 6 (lower is better)
Translates to: ERAAPARARSTR*RSRPAAGGAGS
Trigger: GCTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGGCCGGAGCTGCTCGCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp AGAGCGAGCAGCTCCGGCCCGAGCGCGGTCAACGCGTaGCCGCTCACGTCCAGCAGCTGGAGGTGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: RASSSGPSAVNA*PLTSSSWRCGK
Trigger: CTTCCCGCACCTCCAGCTGCTGGACGTGAGCGGCAACGCGTTGACCGCGCTCGGGCCGGAGCTGCTCGCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 72 bp CCTCCAGCTCAGACTCCAGCGTCTCGGTGGACACGCTaGGGCGGGACCAGTTCAGTTCGGCCTCCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: PPAQTPASRWTR*GGTSSVRPPRP
Trigger: CGGCCGGGGAGGCCGAACTGAACTGGTCCCGCCTCAGCGTGTCCACCGAGACGCTGGAGTCTGAGCTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp AGCGCGCGCAGCTCTAAGAGCGAGGCAGGCACCTCCTGGAAACAGTaGCCGCTGAGGTTGAGCACCTGGAGGCTGCGGCAGAGCGGCGAC +
Preference number: 6 (lower is better)
Translates to: SARSSKSEAGTSWKQ*PLRLSTWRLRQSGD
Trigger: GTCGCCGCTCTGCCGCAGCCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCTGCGCGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp GAGGCAGGCACCTCCTGGAAACAGTTGCCGCTGAGGTaGAGCACCTGGAGGCTGCGGCAGAGCGGCGACTGG +
Preference number: 6 (lower is better)
Translates to: EAGTSWKQLPLR*STWRLRQSGDW
Trigger: CCAGTCGCCGCTCTGCCGCAGCCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp AGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTGGTTaGCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: SSRSQPGCSAVG*RPGSGSAARAA
Trigger: AGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp TGCAAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTaGTTGCCGCCCAGGCTCAGGGTCTGCAGCGCGCGC +
Preference number: 6 (lower is better)
Translates to: CKFSISAGMLCS*LPPRLRVCSAR
Trigger: GCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp AAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTGGTaGCCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: KFSISAGMLCSW*PPRLRVCSARS
Trigger: GCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp CTGCAAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTaGGTTGCCGCCCAGGCTCAGGGTCTGCAGCGCGCG +
Preference number: 6 (lower is better)
Translates to: LQVLDLSRDALQ*VAAQAQGLQRA
Trigger: CGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CCA 72 bp AGCGCGCGCAGCTCTAAGAGCGAGGCAGGCACCTCCTaGAAACAGTTGCCGCTGAGGTTGAGCACCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SARSSKSEAGTS*KQLPLRLSTWR
Trigger: CCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCTGCGCGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 72 bp AGCTCTAAGAGCGAGGCAGGCACCTCCTGGAAACAGTaGCCGCTGAGGTTGAGCACCTGGAGGCTGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SSKSEAGTSWKQ*PLRLSTWRLRQ
Trigger: CTGCCGCAGCCTCCAGGTGCTCAACCTCAGCGGCAACTGTTTCCAGGAGGTGCCTGCCTCGCTCTTAGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp AAACTCTGCAAGTTCTCGATCTCAGCCGGGATGCTCTGCAGTTGGTaGCCGCCCAGGCTCAGGGTCTGCAGCGCGCGCAGCTCTAAGAGC +
Preference number: 6 (lower is better)
Translates to: KLCKFSISAGMLCSW*PPRLRVCSARSSKS
Trigger: GCTCTTAGAGCTGCGCGCGCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp AAACTCTGCAAGTTCTCGATCTCAGCCGGGATGCTCTaGAGTTGGTTGCCGCCCAGGCTCAGGGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: KLCKFSISAGML*SWLPPRLRVCS
Trigger: GCTGCAGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS GCA 72 bp ACTCTAAACTCTGCAAGTTCTCGATCTCAGCCGGGATaGTCTGCAGTTGGTTGCCGCCCAGGCTCAGGGTCT +
Preference number: 6 (lower is better)
Translates to: TLNSASSRSQPG*SAVGCRPGSGS
Trigger: AGACCCTGAGCCTGGGCGGCAACCAACTGCAGAGCATCCCGGCTGAGATCGAGAACTTGCAGAGTTTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 72 bp GTGAGAGGCAGAACTGCAAGGGGAAGAACATTCTGGTaGACACAAGTAGTGCATCAGTGGGAGGCGATACTT +
Preference number: 6 (lower is better)
Translates to: VRGRTARGRTFW*TQVVHQWEAIL
Trigger: AAGTATCGCCTCCCACTGATGCACTACTTGTGTTCACCAGAATGTTCTTCCCCTTGCAGTTCTGCCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 72 bp TCTTCTGAGTCAGATTCACTCTGGGAAGTGGAGCTGTaGGAGGCAGAACTGCAAGGGGAAGAACATTCTGGT +
Preference number: 6 (lower is better)
Translates to: SSESDSLWEVEL*EAELQGEEHSG
Trigger: ACCAGAATGTTCTTCCCCTTGCAGTTCTGCCTCTCACAGCTCCACTTCCCAGAGTGAATCTGACTCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS CAA 90 bp CATCAGTGGGAGGCGATACTTCCCACAGAAGTCCACAAATTTAATTaGTCTGACACAGCAGTCAAAGTAGACTCCTCCACACTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: HQWEAILPTEVHKFN*SDTAVKVDSSTLWV
Trigger: AACCCAAAGTGTGGAGGAGTCTACTTTGACTGCTGTGTCAGACAAATTAAATTTGTGGACTTCTGTGGGAAGTATCGCCTCCCACTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4
CDS TCA 72 bp ACCAATGGATTTCCTCGTAAACTCAACTCTTCCAAATaGATAAGGTTGAGGATCTCTCGAGGCAGATATGTC +
Preference number: 6 (lower is better)
Translates to: TNGFPRKLNSSK*IRLRISRGRYV
Trigger: GACATATCTGCCTCGAGAGATCCTCAACCTTATTCATTTGGAAGAGTTGAGTTTACGAGGAAATCCATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295628.4