RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC56 (Homo sapiens)

Ensembl gene IDs: ENSG00000161328

Ensembl transcript IDs: ENST00000270115.8, ENST00000611111.2

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTaGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGG +
Preference number: 1 (lower is better)
Translates to: YRSAGTLQIPRRREA*TAPPAASGEQLGPW
Trigger: CCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR CCA 90 bp CAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTaGAAATGTTGGTTTGGGTTCCGGGGCGTCCTGCGCCAAGAGGAG +
Preference number: 1 (lower is better)
Translates to: QRGLQSKPHFCTPES*KCWFGFRGVLRQEE
Trigger: CTCCTCTTGGCGCAGGACGCCCCGGAACCCAAACCAACATTTCCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCCTGCCCCTCGGCCATaGCCAATTCTAGCAGGAGAG +
Preference number: 2 (lower is better)
Translates to: QIPRRREAWTAPPAASGEPAPRP*PILAGE
Trigger: CTCTCCTGCTAGAATTGGGCATGGCCGAGGGGCAGG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGCCCTAAGGAAGGGCTaGGGAGCCGGACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: RAALSQCGNPTDPPETGGALRKG*GAGPSL
Trigger: GAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGGCCAAACCCAGTTaGGGGCCTAAACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: QIPRRREAWTAPPAASGEQAKPS*GPKLGS
Trigger: GGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR CCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACGCCCTAAGGAAGGGCTaGGGAGCCGGACCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHALRKG*GAGPSL
Trigger: GAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGC...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR CCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCAGGCCAAACCCAGTTaGGGGCCTAAACTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHQAKPS*GPKLGS
Trigger: GGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTG...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR TCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGTATTCTGTGCTCTGTaGCCACATATGTGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: PRESLALRKGWGAGPSLPVFCAL*PHMWAS
Trigger: ACTTGCCCACATATGTGGTCACAGAGCACAGAATAC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR TCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGTATTCTGTGCTCTGTaGCCACATATGTGGGCAAGT +
Preference number: 2 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTVFCAL*PHMWAS
Trigger: ACTTGCCCACATATGTGGTCACAGAGCACAGAATAC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCGCCCAGGTATTCTGTaGTCTGTGACCACATATGTG +
Preference number: 2 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPRPGIL*SVTTYV
Trigger: CACATATGTGGTCACAGAGCACAGAATACCTGGGCG...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR GCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACGCCCAGGTATTCTGTaGTCTGTGACCACATATGTG +
Preference number: 2 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGRPGIL*SVTTYV
Trigger: CACATATGTGGTCACAGAGCACAGAATACCTGGGCG...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGCGCAGCTCCAGCCCCTaGCCCTCGGCCATGCCCAAT +
Preference number: 2 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWRSSSP*PSAMPN
Trigger: ATTGGGCATGGCCGAGGGGCAGGGGCTGGAGCTGCG...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGGCCGCCCTATCGCAGTaGGGGAACCCTACAGATCCC +
Preference number: 2 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWAALSQ*GNPTDP
Trigger: GGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGC...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR CCA 72 bp GCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTaGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTG +
Preference number: 3 (lower is better)
Translates to: AGTLQIPRRREA*TAPPAASGEQL
Trigger: CAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR CCA 72 bp GGGAGCCGGACCCTCCCTCCCCAGGCCAAACCCAGTTaGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTC +
Preference number: 3 (lower is better)
Translates to: GSRTLPPQAKPS*GPKLGSSLCCL
Trigger: GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGGAGGGAGGGTCCGGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR CCA 72 bp AAACCGCATTTCTGTACACCTGAGAGCTGGAAATGTTaGTTTGGGTTCCGGGGCGTCCTGCGCCAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: KPHFCTPESWKC*FGFRGVLRQEE
Trigger: CTCCTCTTGGCGCAGGACGCCCCGGAACCCAAACCAACATTTCCAGCTCTCAGGTGTACAGAAATGCGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
3UTR CCA 72 bp CTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTaGAAATGTTGGTTTGGGTTCCGGGGCGTCCTGCGC +
Preference number: 3 (lower is better)
Translates to: LQSKPHFCTPES*KCWFGFRGVLR
Trigger: GCGCAGGACGCCCCGGAACCCAAACCAACATTTCCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGCTGGCAGCTCGGCCCTaGGCGCCCTCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGLAARP*APSTSR
Trigger: CCTGGAGGTGGAGGGCGCCCAGGGCCGAGCTGCCAG...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCTGGCAGCTCGGCCCTaGGCGCCCTCCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGLAARP*APSTSR
Trigger: CCTGGAGGTGGAGGGCGCCCAGGGCCGAGCTGCCAG...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCTGGCCTGGCACTGGTaGCTACGCTCCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGELAWHW*LRSRRP
Trigger: GGGCCTGCGGGAGCGTAGGCACCAGTGCCAGGCCAG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGCTGGCCTGGCACTGGTaGCTACGCTCCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLLAWHW*LRSRRP
Trigger: GGGCCTGCGGGAGCGTAGGCACCAGTGCCAGGCCAG...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGGGTGAAGGGACCAGGTaGTGGCTCGAGGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGGEGTR*WLEVPE
Trigger: CTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACC...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCGACGCCCCCTGGACTaGAGGTCTGTCGACCACCGC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGERRPLD*RSVDHR
Trigger: GCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTCG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGGCCAGGCCCCCAGCTaGCCAGGACTCGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPGQAPS*PGLGAD
Trigger: GTCGGCTCCGAGTCCTGGGCAGCTGGGGGCCTGGCC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCTCGCCCCAGAGCTGTaGGCTGCACGTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGELAPEL*AARGLH
Trigger: GTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGAG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTCCCTGGCCTGGCACTaGTGCCTACGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGESLAWH*CLRSRR
Trigger: CCTGCGGGAGCGTAGGCACCAGTGCCAGGCCAGGGA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGGGGGCTCCCTGGCCTaGCACTGGTGCCTACGCTCC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLGGSLA*HWCLRS
Trigger: GGAGCGTAGGCACCAGTGCCAGGCCAGGGAGCCCCC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGGCGGCCGGATCTCCTaGCCTGTGTTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEGGRIS*PVLGQL
Trigger: CAGCTGCCCCAACACAGGCCAGGAGATCCGGCCGCC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCGGCGGCCGGATCTCCTaGCCTGTGTTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGGGRIS*PVLGQL
Trigger: CAGCTGCCCCAACACAGGCCAGGAGATCCGGCCGCC...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCTGGGGTGGAAGTGCTaGCGGCCGGATCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGLGWKC*RPDLLA
Trigger: GGCCAGGAGATCCGGCCGCCAGCACTTCCACCCCAG...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCGGAGCCGACGCCCCCTaGACTGCAGGTCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGGADAP*TAGLST
Trigger: GGTCGACAGACCTGCAGTCCAGGGGGCGTCGGCTCC...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCGGGTTGTGCAGGCCTTaGCAGCTCAGCTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGGLCRP*QLSSRT
Trigger: GGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCC...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGGTGGCCCAGAGACGTaGCCAAGTCCCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEGGPET*PSPSGS
Trigger: GCTCCCTGAGGGACTTGGGCACGTCTCTGGGCCACC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCGCGGGGAGCTGCTaGCAGAATCTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGTAGSC*QNLVAL
Trigger: CAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGT...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGCGCAGCTCCAGCCCCTaGCCCTCGGCCATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLRSSSP*PSAMPN
Trigger: ATTGGGCATGGCCGAGGGGCAGGGGCTGGAGCTGCG...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTAGGTGTCCGGCCCTaGCAGCTCGGCCCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGLGVRP*QLGPGR
Trigger: GCGCCCAGGGCCGAGCTGCCAGGGCCGGACACCTAG...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGCTCGCCCCAGAGCTGTaGGCTGCACGTGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLLAPEL*AARGLH
Trigger: GTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGAG...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTGGGCACCTTGTTGGTaGGGCCAGGGGCCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEWAPCW*GQGPAV
Trigger: TACAGCCGGCCCCTGGCCCCACCAACAAGGTGCCCA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTGTGGGCAGGGGTTGTaGAGGCCTTGCCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGECGQGL*RPCQLS
Trigger: GCTGAGCTGGCAAGGCCTGCACAACCCCTGCCCACA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGACTGCCAGGGCCCTTaGTCTGTGGGCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEDCQGP*SVGRGC
Trigger: ACAACCCCTGCCCACAGAGCAAGGGCCCTGGCAGTC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGCTCTGGGGTGGAAGTaGTGGCGGCCGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLALGWK*WRPDLL
Trigger: CAGGAGATCCGGCCGCCAGCACTTCCACCCCAGAGC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGACCACCGCGGGGAGCTaGTGCCAGAATCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLTTAGS*CQNLVA
Trigger: GGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGT...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGAGCATGGCCAGGCGTaGGCACAGCTGCAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEEHGQA*AQLQVA
Trigger: CGCTACTTGCAGCTGTGCCCACGCCTGGCCATGCTC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCCTGGGGTGGAAGTGCTaGCGGCCGGATCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPLGWKC*RPDLLA
Trigger: GGCCAGGAGATCCGGCCGCCAGCACTTCCACCCCAG...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCCTAGAGCTGCCCCTGTaGCAGGCGAGTTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPLELPL*QASWPA
Trigger: AGCCGGCCAACTCGCCTGGCACAGGGGCAGCTCTAG...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGGCCTGCACGTGGCCTaGGTGCTCCTCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPGLHVA*VLLCCP
Trigger: TGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGTTGGGCTCTGCCTGGTaGACTTGCTCTTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGLGSAW*TCSSGT
Trigger: GGTCCCTGAAGAGCAAGTGCACCAGGCAGAGCCCAA...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGGCCAGGCCCCCAGCTaGCCAGGACTCGGAGCCGAC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPGQAPS*PGLGAD
Trigger: GTCGGCTCCGAGTCCTGGGCAGCTGGGGGCCTGGCC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCCTAGGTGTCCGGCCCTaGCAGCTCGGCCCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTLGVRP*QLGPGR
Trigger: GCGCCCAGGGCCGAGCTGCCAGGGCCGGACACCTAG...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCCCAAGTCTGTCCCTCTaGCTGCCAGGGCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPPSLSL*LPGPLL
Trigger: GAGCAAGGGCCCTGGCAGTCAGAGGGACAGACTTGG...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGCCAGCCACAGCACCTaGAGGTGGCCCAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGASHST*RWPRDV
Trigger: CACGTCTCTGGGCCACCTGCAGGTGCTGTGGCTGGC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACTTCGTCCAGGACCTaGAGCTGGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGTSSRT*SWGMSF
Trigger: GAAGCTCATTCCCCAGCTGCAGGTCCTGGACGAAGT...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCGGTGGGCCTGTGTGTaGGGCCGGCACTTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTRWACV*GRHFVQ
Trigger: CTGGACGAAGTGCCGGCCGCACACACAGGCCCACCG...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCTGGGCACCTTGTTGGTaGGGCCAGGGGCCGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGWAPCW*GQGPAV
Trigger: TACAGCCGGCCCCTGGCCCCACCAACAAGGTGCCCA...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCCCTGGGCACCTTGTTaGTGGGGCCAGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGPWAPC*WGQGPA
Trigger: AGCCGGCCCCTGGCCCCACCAACAAGGTGCCCAGGG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCCCTGGGCACCTTGTTaGTGGGGCCAGGGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPPWAPC*WGQGPA
Trigger: AGCCGGCCCCTGGCCCCACCAACAAGGTGCCCAGGG...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTGTAGTTGTAGCCCCTaGGCACCTTGTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGECSCSP*APCWWG
Trigger: GCCCCACCAACAAGGTGCCCAGGGGCTACAACTACA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACTTGGCCAGCACCATaGGTGAGGCTGCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGTWPAP*VRLLVL
Trigger: TAACACCAGCAGCCTCACCCATGGTGCTGGCCAAGT...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCTTCCCACAGAGGACTTaGCCAGCACCATGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGFPQRT*PAPWVR
Trigger: CCTCACCCATGGTGCTGGCCAAGTCCTCTGTGGGAA...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCCCCGCAGGCCCTTGGTaGGGTTCCCACAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPPAGPW*GSHRGL
Trigger: AAGTCCTCTGTGGGAACCCCACCAAGGGCCTGCGGG...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGGGGGCTCCCTGGCCTaGCACTGGTGCCTACGCTCC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPGGSLA*HWCLRS
Trigger: GGAGCGTAGGCACCAGTGCCAGGCCAGGGAGCCCCC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGGCTGGAGGGAGTCTTaGGCTCTGCCTGGTGCACTT +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLGWRES*ALPGAL
Trigger: AAGTGCACCAGGCAGAGCCCAAGACTCCCTCCAGCC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGAAGGGACCAGGTGCTaGCTCGAGGTCCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTEGTRC*LEVPEG
Trigger: GCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGTGGCCTTGGGTGCTTaGGAGGTGAAGGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLVALGA*EVKGPG
Trigger: ACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCAC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGGAGCCGACGCCCCCTaGACTGCAGGTCTGTCGACC +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTGADAP*TAGLST
Trigger: GGTCGACAGACCTGCAGTCCAGGGGGCGTCGGCTCC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGTTGGGGGCCTAAACTaGGTTCCAGCCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLVGGLN*VPASAA
Trigger: GGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAAC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGACTGCCAGGGCCCTTaGTCTGTGGGCAGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGDCQGP*SVGRGC
Trigger: ACAACCCCTGCCCACAGAGCAAGGGCCCTGGCAGTC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGGGAGCCCAGGTGGCTaGCGTTCAGCTTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPGSPGG*RSASVG
Trigger: ACCAACTGAAGCTGAACGGCAGCCACCTGGGCTCCC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGCCAGCCACAGCACCTaGAGGTGGCCCAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTASHST*RWPRDV
Trigger: CACGTCTCTGGGCCACCTGCAGGTGCTGTGGCTGGC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCCGGTGGGCCTGTGTGTaGGGCCGGCACTTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTRWACV*GRHFVQ
Trigger: CTGGACGAAGTGCCGGCCGCACACACAGGCCCACCG...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGTCTGCCTGGTGCACTTaGTCTTCAGGGACCCTCCGT +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLSAWCT*SSGTLR
Trigger: ACGGAGGGTCCCTGAAGAGCAAGTGCACCAGGCAGA...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGTTGGGCTCTGCCTGGTaGACTTGCTCTTCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLLGSAW*TCSSGT
Trigger: GGTCCCTGAAGAGCAAGTGCACCAGGCAGAGCCCAA...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGGGAGTCTTGGGCTCTaGCTGGTGCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLGSLGL*LVHLLF
Trigger: GAAGAGCAAGTGCACCAGGCAGAGCCCAAGACTCCC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCGACGCCCCCTGGACTaGAGGTCTGTCGACCACCGC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPRRPLD*RSVDHR
Trigger: GCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTCG...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGCAGCTCCAGCCCCTaGCCCTCGGCCATGCCCAAT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHRSSSP*PSAMPN
Trigger: ATTGGGCATGGCCGAGGGGCAGGGGCTGGAGCTGCG...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCAAAGATGCAGACGTCTaGCGGGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPKDADV*RGAVAH
Trigger: GTGAGCCACTGCGCCCCGCCAGACGTCTGCATCTTT...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTCAGTTGGTCCAGGTTaGGCAGGTGCACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGESVGPG*AGAPQS
Trigger: ACTTTGGGGTGCACCTGCCCAACCTGGACCAACTGA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCACAGCACCTGCAGGTaGCCCAGAGACGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGHSTCR*PRDVPK
Trigger: CTTGGGCACGTCTCTGGGCCACCTGCAGGTGCTGTG...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCACTTGGCCAGCACCATaGGTGAGGCTGCTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGTWPAP*VRLLVL
Trigger: TAACACCAGCAGCCTCACCCATGGTGCTGGCCAAGT...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGTCCCTGGCCTGGCACTaGTGCCTACGCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGSLAWH*CLRSRR
Trigger: CCTGCGGGAGCGTAGGCACCAGTGCCAGGCCAGGGA...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGAAGGGACCAGGTGCTaGCTCGAGGTCCCGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTEGTRC*LEVPEG
Trigger: GCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTC...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGCCCTAAGGAAGGGCTaGGGAGCCGGACCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGALRKG*GAGPSL
Trigger: GAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGAGAGCTGGAAATGTTaGTTTGGGTTCCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEESWKC*FGFRGV
Trigger: GACGCCCCGGAACCCAAACCAACATTTCCAGCTCTC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGACCACGTGTGGACACTaGAGATGCATCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGETTCGH*RCILSI
Trigger: GATGGAGAGGATGCATCTTCAGTGTCCACACGTGGT...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCTAGAGCTGCCCCTGTaGCAGGCGAGTTGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHLELPL*QASWPA
Trigger: AGCCGGCCAACTCGCCTGGCACAGGGGCAGCTCTAG...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGGGCCTGCACGTGGCCTaGGTGCTCCTCTGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGGLHVA*VLLCCP
Trigger: TGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCC...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGGGTTGTGCAGGCCTTaGCAGCTCAGCTCCCGCACC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPGLCRP*QLSSRT
Trigger: GGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGCTCTGGGGTGGAAGTaGTGGCGGCCGGATCTCCTG +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPALGWK*WRPDLL
Trigger: CAGGAGATCCGGCCGCCAGCACTTCCACCCCAGAGC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGGTGAAGGGACCAGGTaGTGGCTCGAGGTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGGEGTR*WLEVPE
Trigger: CTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGTGAGAGAGTTCAGCTaGCCTGGGAGGTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPVREFS*PGRSSC
Trigger: GCAGCTAGACCTCCCAGGGCAGCTGAACTCTCTCAC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGCCGCCCTATCGCAGTaGGGGAACCCTACAGATCCC +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTAALSQ*GNPTDP
Trigger: GGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGAGGGCCCTTGCTCTGTaGGCAGGGGTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGRALAL*AGVVQA
Trigger: GGCCTGCACAACCCCTGCCCACAGAGCAAGGGCCCT...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGAGGGCCCTTGCTCTGTaGGCAGGGGTTGTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPRALAL*AGVVQA
Trigger: GGCCTGCACAACCCCTGCCCACAGAGCAAGGGCCCT...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGAGCATGGCCAGGCGTaGGCACAGCTGCAAGTAGCG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTEHGQA*AQLQVA
Trigger: CGCTACTTGCAGCTGTGCCCACGCCTGGCCATGCTC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGCAGGCCCTTGGTaGGGTTCCCACAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTPAGPW*GSHRGL
Trigger: AAGTCCTCTGTGGGAACCCCACCAAGGGCCTGCGGG...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGGGTCAGGCTCTGGGGTaGAAGTGCTGGCGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGGQALG*KCWRPD
Trigger: ATCCGGCCGCCAGCACTTCCACCCCAGAGCCTGACC...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGGTCAGGCTCTGGGGTaGAAGTGCTGGCGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGGQALG*KCWRPD
Trigger: ATCCGGCCGCCAGCACTTCCACCCCAGAGCCTGACC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACTGCAGGGTCAGGCTCTaGGGTGGAAGTGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHCRVRL*GGSAGG
Trigger: GCCGCCAGCACTTCCACCCCAGAGCCTGACCCTGCA...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCGGCGAGTTGGCCGGCTaGGGGCTCAGCCTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLGELAG*GLSLGV
Trigger: GACACCTAGGCTGAGCCCTCAGCCGGCCAACTCGCC...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCCAAGTCTGTCCCTCTaGCTGCCAGGGCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGPSLSL*LPGPLL
Trigger: GAGCAAGGGCCCTGGCAGTCAGAGGGACAGACTTGG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACGGTCCTCCACGCTGTTaGCCTCCAGGTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHGPPRC*PPGPAP
Trigger: AGGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACC...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGGGAGTCTTGGGCTCTaGCTGGTGCACTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGGSLGL*LVHLLF
Trigger: GAAGAGCAAGTGCACCAGGCAGAGCCCAAGACTCCC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCACCGCGGGGAGCTGCTaGCAGAATCTCGTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTTAGSC*QNLVAL
Trigger: CAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGT...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACGCCGCCCTATCGCAGTaGGGGAACCCTACAGATCCC +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHAALSQ*GNPTDP
Trigger: GGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGC...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCCTGTGCCAGGCGAGTTaGCCGGCTGAGGGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLLCQAS*PAEGSA
Trigger: GGCTGAGCCCTCAGCCGGCCAACTCGCCTGGCACAG...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGTCAAGTCTCCGGATaGGGGCTCCACGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTGQVSG*GLHGDS
Trigger: ACTGTCCCCGTGGAGCCCCCATCCGGAGACTTGACC...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCAGAAGGGCCAGGGCCTaGAGGCCCGGGACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLRRARA*RPGTAS
Trigger: AGACGCAGTCCCGGGCCTCCAGGCCCTGGCCCTTCT...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGGCTGGAGGGAGTCTTaGGCTCTGCCTGGTGCACTT +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTGWRES*ALPGAL
Trigger: AAGTGCACCAGGCAGAGCCCAAGACTCCCTCCAGCC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGCTGCCAGAATCTCGTaGCCTTGGGTGCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTAARIS*PWVLGR
Trigger: CCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCAGGCCAAACCCAGTTaGGGGCCTAAACTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGQAKPS*GPKLGS
Trigger: GGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTG...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAAATGTTGGTTTaGGTTCCGGGGCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGLEMLV*VPGRPA
Trigger: CGCAGGACGCCCCGGAACCCAAACCAACATTTCCAG...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGGCCAGCACCATGGGTaGGGCTGCTGGTGTTATCTT +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTGQHHG*GCWCYL
Trigger: AAGATAACACCAGCAGCCTCACCCATGGTGCTGGCC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGGCATTTCTGTACACCTaGGAGCTGGAAATGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGAFLYT*ELEMLV
Trigger: AACCAACATTTCCAGCTCTCAGGTGTACAGAAATGC...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCACTTCGTCCAGGACCTaGAGCTGGGGAATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGTSSRT*SWGMSF
Trigger: GAAGCTCATTCCCCAGCTGCAGGTCCTGGACGAAGT...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGAAGTCAGAGCTGTCTaGAGGGTCAGGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTEVRAV*RVRLWG
Trigger: ACCCCAGAGCCTGACCCTGCAGACAGCTCTGACTTC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGTCTCGTGGCCTTGGGTaGTTGGGAGGTGAAGGGACC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPSRGLG*LGGEGT
Trigger: GGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGA...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCACCACCGCGGGGAGCTaGTGCCAGAATCTCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLTTAGS*CQNLVA
Trigger: GGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGT...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCCCTGCCCCTCGGCCATaGCCAATTCTAGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTPAPRP*PILAGE
Trigger: CTCTCCTGCTAGAATTGGGCATGGCCGAGGGGCAGG...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCGGGACCTTGGGCCACTaGGGCCTAGGAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLGTLGH*GLGGGS
Trigger: AGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCC...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACAAAGATGCAGACGTCTaGCGGGGCGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHKDADV*RGAVAH
Trigger: GTGAGCCACTGCGCCCCGCCAGACGTCTGCATCTTT...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGCATTCACATGTCACCTaGTGTTGCCCCTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGHSHVT*CCPLKM
Trigger: CATCTTTAAGGGGCAACACCAGGTGACATGTGAATG...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCTCAGGGAGCCCAGGTaGCTGCCGTTCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHLREPR*LPFSFS
Trigger: ACTGAAGCTGAACGGCAGCCACCTGGGCTCCCTGAG...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACTCAGGGAGCCCAGGTaGCTGCCGTTCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGLREPR*LPFSFS
Trigger: ACTGAAGCTGAACGGCAGCCACCTGGGCTCCCTGAG...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCTTCCAGCAGGCACAGTaGGCTCAGGTCCGAGATGTT +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGFQQAQ*AQVRDV
Trigger: AACATCTCGGACCTGAGCCCACTGTGCCTGCTGGAA...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCTTCCCACAGAGGACTTaGCCAGCACCATGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTFPQRT*PAPWVR
Trigger: CCTCACCCATGGTGCTGGCCAAGTCCTCTGTGGGAA...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGTGGCCTTGGGTGCTTaGGAGGTGAAGGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPVALGA*EVKGPG
Trigger: ACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCAC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGCTGCCAGAATCTCGTaGCCTTGGGTGCTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPAARIS*PWVLGR
Trigger: CCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGAAGTGGGGACGGGGCTaGGGTGAGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGKWGRG*GERVQL
Trigger: CAGCTGAACTCTCTCACCCCAGCCCCGTCCCCACTT...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGGTTGGGGGCCTAAACTaGGTTCCAGCCTCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGVGGLN*VPASAA
Trigger: GGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAAC...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGTGTACACCTGAGAGCTaGAAATGTTGGTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGCTPES*KCWFGF
Trigger: GAACCCAAACCAACATTTCCAGCTCTCAGGTGTACA...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCGCTGCATCATTTATTaGACCAACGTGGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGRCIIY*TNVAYK
Trigger: TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCG...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCAAAGTTCCCCAGGCTaGCCTCACGAGTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGQSSPG*PHECPH
Trigger: GTGTGGACACTCGTGAGGGCAGCCTGGGGAACTTTG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCAAAGTTCCCCAGGCTaGCCTCACGAGTGTCCACAC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPQSSPG*PHECPH
Trigger: GTGTGGACACTCGTGAGGGCAGCCTGGGGAACTTTG...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGTAGAGTTCCTTAAGTaGTGGCAAAGAGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: PRESLALRKGWGAGPSLPVEFLK*WQRGDA
Trigger: GGCATCGCCTCTTTGCCAGCACTTAAGGAACTCTAC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGAAGTCAGAGCTGTCTaGAGGGTCAGGCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGEVRAV*RVRLWG
Trigger: ACCCCAGAGCCTGACCCTGCAGACAGCTCTGACTTC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGTGAGAGAGTTCAGCTaGCCTGGGAGGTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTVREFS*PGRSSC
Trigger: GCAGCTAGACCTCCCAGGGCAGCTGAACTCTCTCAC...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGTCTGTTGACCACGTGTaGACACTGAAGATGCATCCT +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLSVDHV*TLKMHP
Trigger: AGGATGCATCTTCAGTGTCCACACGTGGTCAACAGA...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGTGTAGTTGTAGCCCCTaGGCACCTTGTTGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGCSCSP*APCWWG
Trigger: GCCCCACCAACAAGGTGCCCAGGGGCTACAACTACA...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGTCCAGGACCTGCAGCTaGGGAATGAGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPSRTCS*GMSFLT
Trigger: GGTGAGGAAGCTCATTCCCCAGCTGCAGGTCCTGGA...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGATCCAGGACCTGCAGCTaGGGAATGAGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGSRTCS*GMSFLT
Trigger: GGTGAGGAAGCTCATTCCCCAGCTGCAGGTCCTGGA...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACTGCAGGGTCAGGCTCTaGGGTGGAAGTGCTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDCRVRL*GGSAGG
Trigger: GCCGCCAGCACTTCCACCCCAGAGCCTGACCCTGCA...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCTGGAAATGTTGGTTTaGGTTCCGGGGCGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGLEMLV*VPGRPA
Trigger: CGCAGGACGCCCCGGAACCCAAACCAACATTTCCAG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGATGGCTTTTATCTGTTaGCCACGTGTGGACACTGAA +
Preference number: 4 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLMAFIC*PRVDTE
Trigger: TTCAGTGTCCACACGTGGTCAACAGATAAAAGCCAT...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCGGGAGCCCAGGTGGCTaGCGTTCAGCTTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLGSPGG*RSASVG
Trigger: ACCAACTGAAGCTGAACGGCAGCCACCTGGGCTCCC...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGTAGAGTTCCTTAAGTaGTGGCAAAGAGGCGATGCC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGVEFLK*WQRGDA
Trigger: GGCATCGCCTCTTTGCCAGCACTTAAGGAACTCTAC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACGGTCCTCCACGCTGTTaGCCTCCAGGTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDGPPRC*PPGPAP
Trigger: AGGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACC...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCCACTTAGAACGTTCTaGCCATGGCTTTTATCTGTT +
Preference number: 4 (lower is better)
Translates to: QIPRRREAWTAPPAASGEPLRTF*PWLLSV
Trigger: AACAGATAAAAGCCATGGCCAGAACGTTCTAAGTGG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGATCAGTTGGTCCAGGTTaGGCAGGTGCACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGSVGPG*AGAPQS
Trigger: ACTTTGGGGTGCACCTGCCCAACCTGGACCAACTGA...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACCACAGCACCTGCAGGTaGCCCAGAGACGTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDHSTCR*PRDVPK
Trigger: CTTGGGCACGTCTCTGGGCCACCTGCAGGTGCTGTG...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCGAGTTCCTTAAGTGCTaGCAAAGAGGCGATGCCATC +
Preference number: 4 (lower is better)
Translates to: RAALSQCGNPTDPPETGGEFLKC*QRGDAI
Trigger: GATGGCATCGCCTCTTTGCCAGCACTTAAGGAACTC...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACCCTGCCCCTCGGCCATaGCCAATTCTAGCAGGAGAG +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDPAPRP*PILAGE
Trigger: CTCTCCTGCTAGAATTGGGCATGGCCGAGGGGCAGG...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGCTGGTGTTATCTTCTaGGGCCAGGTCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPAGVIF*GQVLRK
Trigger: CTTTCTGAGGACCTGGCCCCAGAAGATAACACCAGC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACAAGTGGGGACGGGGCTaGGGTGAGAGAGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDKWGRG*GERVQL
Trigger: CAGCTGAACTCTCTCACCCCAGCCCCGTCCCCACTT...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCTGTCGAAGGAATCCGTaGACAGGCAGATGCACATGT +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTCRRNP*TGRCTC
Trigger: ACATGTGCATCTGCCTGTTCACGGATTCCTTCGACA...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACTGTCGAAGGAATCCGTaGACAGGCAGATGCACATGT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHCRRNP*TGRCTC
Trigger: ACATGTGCATCTGCCTGTTCACGGATTCCTTCGACA...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACTCCTGGCTAACACGGTaGAACCCTGTCTCTATACGT +
Preference number: 4 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHSWLTR*NPVSIR
Trigger: ACGTATAGAGACAGGGTTTCACCGTGTTAGCCAGGA...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCATGTCACCTGGTGTTaGCCCTTAAAGATGCAGACG +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGHVTWC*PLKMQT
Trigger: CGTCTGCATCTTTAAGGGGCAACACCAGGTGACATG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACTCTGCCTGGTGCACTTaGTCTTCAGGGACCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDSAWCT*SSGTLR
Trigger: ACGGAGGGTCCCTGAAGAGCAAGTGCACCAGGCAGA...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGAGTTCCTTAAGTGCTaGCAAAGAGGCGATGCCATC +
Preference number: 4 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTEFLKC*QRGDAI
Trigger: GATGGCATCGCCTCTTTGCCAGCACTTAAGGAACTC...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCTTCCAGCAGGCACAGTaGGCTCAGGTCCGAGATGTT +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLFQQAQ*AQVRDV
Trigger: AACATCTCGGACCTGAGCCCACTGTGCCTGCTGGAA...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCGAGAGCTGGAAATGTTaGTTTGGGTTCCGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLESWKC*FGFRGV
Trigger: GACGCCCCGGAACCCAAACCAACATTTCCAGCTCTC...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGGTATTCTGTGCTCTGTaGCCACATATGTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPVFCAL*PHMWAS
Trigger: ACTTGCCCACATATGTGGTCACAGAGCACAGAATAC...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGTATTCTGTGCTCTGTaGCCACATATGTGGGCAAGT +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGVFCAL*PHMWAS
Trigger: ACTTGCCCACATATGTGGTCACAGAGCACAGAATAC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGTCTGTTGACCACGTGTaGACACTGAAGATGCATCCT +
Preference number: 4 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGSVDHV*TLKMHP
Trigger: AGGATGCATCTTCAGTGTCCACACGTGGTCAACAGA...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCATTCACATGTCACCTaGTGTTGCCCCTTAAAGATG +
Preference number: 4 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTHSHVT*CCPLKM
Trigger: CATCTTTAAGGGGCAACACCAGGTGACATGTGAATG...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACACCACGTGTGGACACTaGAGATGCATCCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDTTCGH*RCILSI
Trigger: GATGGAGAGGATGCATCTTCAGTGTCCACACGTGGT...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCGCTGCATCATTTATTaGACCAACGTGGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: PIAVREPYRSPGDGRPGPRCIIY*TNVAYK
Trigger: TTTGTAGGCCACGTTGGTTCAATAAATGATGCAGCG...CGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGATGTACACCTGAGAGCTaGAAATGTTGGTTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGCTPES*KCWFGF
Trigger: GAACCCAAACCAACATTTCCAGCTCTCAGGTGTACA...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp CCCCAGGCCAAACCCAGTTGGGGGCCTAAACTGGGTTCCAGCCTCTGCTGCCTCATGGCTTTTATCTGTTaGCCACGTGTGGACACTGAA +
Preference number: 4 (lower is better)
Translates to: PQAKPSWGPKLGSSLCCLMAFIC*PRVDTE
Trigger: TTCAGTGTCCACACGTGGTCAACAGATAAAAGCCAT...GAGGCAGCAGAGGCTGGAACCCAGTTTAGGCCCCCAACTGGGTTTGGCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGTTCAGGGACCCTCCGTaGGCCCCAGGGGGCTACAGC +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWFRDPP*APGGYS
Trigger: GCTGTAGCCCCCTGGGGCCCACGGAGGGTCCCTGAA...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACGCATTTCTGTACACCTaGGAGCTGGAAATGTTGGTT +
Preference number: 4 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDAFLYT*ELEMLV
Trigger: AACCAACATTTCCAGCTCTCAGGTGTACAGAAATGC...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGGGTGGCCCAGAGACGTaGCCAAGTCCCTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWGGPET*PSPSGS
Trigger: GCTCCCTGAGGGACTTGGGCACGTCTCTGGGCCACC...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGGGGACCTTGGGCCACTaGGGCCTAGGAGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWGTLGH*GLGGGS
Trigger: AGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCC...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGTCTCGTGGCCTTGGGTaGTTGGGAGGTGAAGGGACC +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWSRGLG*LGGEGT
Trigger: GGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGA...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGGCTGGTGTTATCTTCTaGGGCCAGGTCCTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWAGVIF*GQVLRK
Trigger: CTTTCTGAGGACCTGGCCCCAGAAGATAACACCAGC...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR TCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGTCCTGGCTAACACGGTaGAACCCTGTCTCTATACGT +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWSWLTR*NPVSIR
Trigger: ACGTATAGAGACAGGGTTTCACCGTGTTAGCCAGGA...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR GCA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGCGCCCAGGTATTCTGTaGTCTGTGACCACATATGTG +
Preference number: 4 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWRPGIL*SVTTYV
Trigger: CACATATGTGGTCACAGAGCACAGAATACCTGGGCG...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGGGGGTTGTGCAGGCCTaGCCAGCTCAGCTCCCGCAC +
Preference number: 5 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGGVVQA*PAQLPH
Trigger: GTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCCC...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
76% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGAGGTCCTCCACGCTGTaGCCCTCCAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGRSSTL*PSRSST
Trigger: GGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACCT...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGGGCTGGAGGGAGTCTaGGGCTCTGCCTGGTGCACT +
Preference number: 5 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLGLEGV*GSAWCT
Trigger: AGTGCACCAGGCAGAGCCCAAGACTCCCTCCAGCCC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp GGGCCTGCCTCGCCCCAGAGCTGTGGGCTGCACGTGGCCTGCACGTaGCCTGCGTGCTCCTCTGCTGTCCACAGTCGCAGGAGGGGATGC +
Preference number: 5 (lower is better)
Translates to: GPASPQSCGLHVACT*PACSSAVHSRRRGC
Trigger: GCATCCCCTCCTGCGACTGTGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGAGGCAGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGTTCAGTTGGTCCAGGTaGGGCAGGTGCACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGFSWSR*GRCTPK
Trigger: CTTTGGGGTGCACCTGCCCAACCTGGACCAACTGAA...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGTGTAGGCACACCAGGTaGCCCTCCAGGGTGAGCATG +
Preference number: 5 (lower is better)
Translates to: QIPRRREAWTAPPAASGECRHTR*PSRVSM
Trigger: CATGCTCACCCTGGAGGGCAACCTGGTGTGCCTACA...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGAGGCCGTTGCCCTTCTaGATGGCCTCCTTCACCGCA +
Preference number: 5 (lower is better)
Translates to: QIPRRREAWTAPPAASGERPLPF*MASFTA
Trigger: TGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCT...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGCAGAATCTCGTGGCCTaGGGTGCTTGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: PETGGLDRTPGGLRRAAGQNLVA*GAWEVK
Trigger: CTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTG...CCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 90 bp GGGCTCCACGGGGACAGTCCAGCGGGGGAAGGCCGTTGCCCTTCTTaGTGGCCTCCTTCACCGCAAGCCAGTCCTGGCTCAGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: GLHGDSPAGEGRCPS*WPPSPQASPGSAAG
Trigger: CCCCGCGGCTGAGCCAGGACTGGCTTGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCTGGACTGTCCCCGTGGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp AGGGGTTGTGCAGGCCTTGCCAGCTCAGCTCCCGCACCCGGACGCTaGAGGTGCTCCGCCGAGGCCCACGGGATCTGTCCCAGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: RGCAGLASSAPAPGR*RCSAEAHGICPSPD
Trigger: ATCTGGGCTGGGACAGATCCCGTGGGCCTCGGCGGAGCACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp GGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCTTCAGTTGGTCCAGGTaGGGCAGGTGCACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GGLDRTPGGLRRAAGTLGFSWSR*GRCTPK
Trigger: CTTTGGGGTGCACCTGCCCAACCTGGACCAACTGAA...GCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGGCTGGAAATGTTGGTTaGGGTTCCGGGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLAGNVG*GSGASC
Trigger: GCAGGACGCCCCGGAACCCAAACCAACATTTCCAGC...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp TGTGCAGGCCTTGCCAGCTCAGCTCCCGCACCCGGACGCTGGAGGTaGTCCGCCGAGGCCCACGGGATCTGTCCCAGCCCAGATCCATTC +
Preference number: 5 (lower is better)
Translates to: CAGLASSAPAPGRWR*SAEAHGICPSPDPF
Trigger: GAATGGATCTGGGCTGGGACAGATCCCGTGGGCCTCGGCGGAGCACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAGGCCTGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCTCTGTGGGCAGGGGTaGTGCAGGCCTTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTLCGQG*CRPCQL
Trigger: GAGCTGGCAAGGCCTGCACAACCCCTGCCCACAGAG...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCAGCGGGGGAAGGCCGTaGCCCTTCTTGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTSGGRP*PFLMAS
Trigger: GGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCT...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp GTCGACCACCGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTaGTTGGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: VDHRGELLPESRGLG*LGGEGTRCWLEVPE
Trigger: CTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp GCCGACGCCCCCTGGACTGCAGGTCTGTCGACCACCGCGGGGAGCTaGTGCCAGAATCTCGTGGCCTTGGGTGCTTGGGAGGTGAAGGGA +
Preference number: 5 (lower is better)
Translates to: ADAPWTAGLSTTAGS*CQNLVALGAWEVKG
Trigger: TCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp ACCACCGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTGCTTaGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTCCCGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: TTAGSCCQNLVALGA*EVKGPGAGSRSRRA
Trigger: AGCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGCTCTGTGGGCAGGGGTaGTGCAGGCCTTGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGLCGQG*CRPCQL
Trigger: GAGCTGGCAAGGCCTGCACAACCCCTGCCCACAGAG...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAAGCGGGGGAAGGCCGTaGCCCTTCTTGATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGSGGRP*PFLMAS
Trigger: GGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCT...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp TGCCTCGCCCCAGAGCTGTGGGCTGCACGTGGCCTGCACGTGGCCTaGGTGCTCCTCTGCTGTCCACAGTCGCAGGAGGGGATGCTCAAA +
Preference number: 5 (lower is better)
Translates to: CLAPELWAARGLHVA*VLLCCPQSQEGMLK
Trigger: TTTGAGCATCCCCTCCTGCGACTGTGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGAGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp GACGCCCCCTGGACTGCAGGTCTGTCGACCACCGCGGGGAGCTGCTaGCAGAATCTCGTGGCCTTGGGTGCTTGGGAGGTGAAGGGACCA +
Preference number: 5 (lower is better)
Translates to: DAPWTAGLSTTAGSC*QNLVALGAWEVKGP
Trigger: TGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp CCCAGCCAAGGCCAGGAAGTCAGAGCTGTCTGCAGGGTCAGGCTCTaGGGTGGAAGTGCTGGCGGCCGGATCTCCTGGCCTGTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PSQGQEVRAVCRVRL*GGSAGGRISWPVLG
Trigger: CCCCAACACAGGCCAGGAGATCCGGCCGCCAGCACTTCCACCCCAGAGCCTGACCCTGCAGACAGCTCTGACTTCCTGGCCTTGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGACATGTCACCTGGTGTaGCCCCTTAAAGATGCAGAC +
Preference number: 5 (lower is better)
Translates to: QIPRRREAWTAPPAASGETCHLV*PLKDAD
Trigger: GTCTGCATCTTTAAGGGGCAACACCAGGTGACATGT...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCGTTCCCACAGAGGACTaGGCCAGCACCATGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SQCGNPTDPPETGGLDRTVPTED*ASTMGE
Trigger: CTCACCCATGGTGCTGGCCAAGTCCTCTGTGGGAAC...GGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCCTCTGCCTGGTGCACTaGCTCTTCAGGGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTLCLVH*LFRDPP
Trigger: CGGAGGGTCCCTGAAGAGCAAGTGCACCAGGCAGAG...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCTCTGCCTGGTGCACTaGCTCTTCAGGGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHLCLVH*LFRDPP
Trigger: CGGAGGGTCCCTGAAGAGCAAGTGCACCAGGCAGAG...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGGGCCGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCAGAATCTCGTGGCCTaGGGTGCTTGGGAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: RAALSQCGNPTDPPETGGQNLVA*GAWEVK
Trigger: CTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTG...GCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCGGCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp GTCTCTATACGTGTTCGGTTGAGGGCCTGCCTCGCCCCAGAGCTGTaGGCTGCACGTGGCCTGCACGTGGCCTGCGTGCTCCTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VSIRVRLRACLAPEL*AARGLHVACVLLCC
Trigger: ACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGAGGCAGGCCCTCAACCGAACACGTATAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCAGCTGGGACCTTGGGCCACTGACATGTCACCTGGTGTaGCCCCTTAAAGATGCAGAC +
Preference number: 5 (lower is better)
Translates to: PGPHPRRPQASSWDLGPLTCHLV*PLKDAD
Trigger: GTCTGCATCTTTAAGGGGCAACACCAGGTGACATGT...CAGTGGCCCAAGGTCCCAGCTGCTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGAGTTCCCACAGAGGACTaGGCCAGCACCATGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGVPTED*ASTMGE
Trigger: CTCACCCATGGTGCTGGCCAAGTCCTCTGTGGGAAC...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGAGCAGCTGGGACCTTGGGCCACTGCGGCCTAGGAGGTGGCTCTTACCCTGGGGCTGGAAATGTTGGTTaGGGTTCCGGGGCGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RAAGTLGHCGLGGGSYPGAGNVG*GSGASC
Trigger: GCAGGACGCCCCGGAACCCAAACCAACATTTCCAGC...CCCAGGGTAAGAGCCACCTCCTAGGCCGCAGTGGCCCAAGGTCCCAGCTGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGCCGCTGCATCATTTATaGAACCAACGTGGCCTACAA +
Preference number: 5 (lower is better)
Translates to: QIPRRREAWTAPPAASGEPLHHL*NQRGLQ
Trigger: TTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGG...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CAGATCCCCCGGAGACGGGAGGCCTGGACCGCACCCCCGGCGGCCTCAGGCGAGGGGATGCTCAAATATTaGTCGAAGGAATCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: QIPRRREAWTAPPAASGEGMLKY*SKESVN
Trigger: GTTCACGGATTCCTTCGACAAATATTTGAGCATCCC...CTCGCCTGAGGCCGCCGGGGGTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACAGGTCCTCCACGCTGTaGCCCTCCAGGTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDRSSTL*PSRSST
Trigger: GGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACCT...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CGCCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGATACAGCCCCTTCCTGTaGGGACTCCGGGTGCCTATA +
Preference number: 5 (lower is better)
Translates to: RPIAVREPYRSPGDGRPGYSPFL*GLRVPI
Trigger: TATAGGCACCCGGAGTCCCAACAGGAAGGGGCTGTA...TCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp ATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCGCACTACAGCCCCTTCCTGTaGGGACTCCGGGTGCCTATA +
Preference number: 5 (lower is better)
Translates to: IAVREPYRSPGDGRPGPHYSPFL*GLRVPI
Trigger: TATAGGCACCCGGAGTCCCAACAGGAAGGGGCTGTA...GTGCGGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 90 bp GGCACAGCTGCAAGTAGCGCACCTGCCCCAGGTCCTCCACGCTGTTaGCCTCCAGGTCCAGCACCTCCAATTGTTCCAGCAGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: GTAASSAPAPGPPRC*PPGPAPPIVPAGTV
Trigger: CACTGTGCCTGCTGGAACAATTGGAGGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACCTGGGGCAGGTGCGCTACTTGCAGCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCGCGGGAAAGCCTGGCCCTAAGGAAGGGCTGGGGAGCCGGACCCTCCCTCCCCGGGATGCTCAAATATTaGTCGAAGGAATCCGTGAAC +
Preference number: 5 (lower is better)
Translates to: PRESLALRKGWGAGPSLPGMLKY*SKESVN
Trigger: GTTCACGGATTCCTTCGACAAATATTTGAGCATCCC...GGGGAGGGAGGGTCCGGCTCCCCAGCCCTTCCTTAGGGCCAGGCTTTCCCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACAGGCCGTTGCCCTTCTaGATGGCCTCCTTCACCGCA +
Preference number: 5 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDRPLPF*MASFTA
Trigger: TGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCT...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TCGGCCATGCCCAATTCTAGCAGGAGAGGCCTCTCACAGGCCTGCTCGGGTGACGTCCAGCACCTCCAATaGTTCCAGCAGGCACAGTGG +
Preference number: 5 (lower is better)
Translates to: SAMPNSSRRGLSQACSGDVQHLQ*FQQAQW
Trigger: CCACTGTGCCTGCTGGAACAATTGGAGGTGCTGGAC...GTCACCCGAGCAGGCCTGTGAGAGGCCTCTCCTGCTAGAATTGGGCATGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp CCCTATCGCAGTGCGGGAACCCTACAGATCCCCCGGAGACGGGAGGCCTGGACCCCGCTGCATCATTTATaGAACCAACGTGGCCTACAA +
Preference number: 5 (lower is better)
Translates to: PYRSAGTLQIPRRREAWTPLHHL*NQRGLQ
Trigger: TTGTAGGCCACGTTGGTTCAATAAATGATGCAGCGG...GGTCCAGGCCTCCCGTCTCCGGGGGATCTGTAGGGTTCCCGCACTGCGATAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 90 bp GTTGCCCTCCAGGTCCAGCACCTCCAATTGTTCCAGCAGGCACAGTaGGCTCAGGTCCGAGATGTTGTTGTAGGAGGCGTAGAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VALQVQHLQLFQQAQ*AQVRDVVVGGVEFL
Trigger: AAGGAACTCTACGCCTCCTACAACAACATCTCGGACCTGAGCCCACTGTGCCTGCTGGAACAATTGGAGGTGCTGGACCTGGAGGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 90 bp GAACGTTCTGGCCATGGCTTTTATCTGTTGACCACGTGTGGACACTaGAGATGCATCCTCTCCATCCCGTCTAGAGCTGCCCCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: ERSGHGFYLLTTCGH*RCILSIPSRAAPVP
Trigger: TGGCACAGGGGCAGCTCTAGACGGGATGGAGAGGATGCATCTTCAGTGTCCACACGTGGTCAACAGATAAAAGCCATGGCCAGAACGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS-3UTR CAA 90 bp TTGAACCAACGTGGCCTACAAAGTAAACCGCATTTCTGTACACCTGAGAGCTGGTGTAGGCACACCAGGTaGCCCTCCAGGGTGAGCATG +
Preference number: 5 (lower is better)
Translates to: LNQRGLQSKPHFCTPESWCRHTR*PSRVSM
Trigger: CATGCTCACCCTGGAGGGCAACCTGGTGTGCCTACA...CCAGCTCTCAGGTGTACAGAAATGCGGTTTACTTTGTAGGCCACGTTGGTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 90 bp CACAGTCGCAGGAGGGGATGCTCAAATATTTGTCGAAGGAATCCGTaGACAGGCAGATGCACATGTAGCCACTTAGAACGTTCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: HSRRRGCSNICRRNP*TGRCTCSHLERSGH
Trigger: ATGGCCAGAACGTTCTAAGTGGCTACATGTGCATCTGCCTGTTCACGGATTCCTTCGACAAATATTTGAGCATCCCCTCCTGCGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CTTGCCAGCTCAGCTCCCGCACCCGGACGCTGGAGGTaGTCCGCCGAGGCCCACGGGATCTGTCCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: LASSAPAPGRWR*SAEAHGICPSP
Trigger: TGGGCTGGGACAGATCCCGTGGGCCTCGGCGGAGCACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CAGCTGCCCAGGACTCGGAGCCGACGCCCCCTGGACTaGAGGTCTGTCGACCACCGCGGGGAGCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: QLPRTRSRRPLD*RSVDHRGELLP
Trigger: TGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCAGGGGGCGTCGGCTCCGAGTCCTGGGCAGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 90 bp CTGACTGCCAGGGCCCTTGCTCTGTGGGCAGGGGTTGTGCAGGCCTaGCCAGCTCAGCTCCCGCACCCGGACGCTGGAGGTGCTCCGCCG +
Preference number: 6 (lower is better)
Translates to: LTARALALWAGVVQA*PAQLPHPDAGGAPP
Trigger: CGGCGGAGCACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCCCTGCCCACAGAGCAAGGGCCCTGGCAGTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 90 bp GACCACCGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTGCTaGGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTCCCGGAGGGC +
Preference number: 6 (lower is better)
Translates to: DHRGELLPESRGLGC*GGEGTRCWLEVPEG
Trigger: GCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CCAGAGCTGTGGGCTGCACGTGGCCTGCACGTGGCCTaGGTGCTCCTCTGCTGTCCACAGTCGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: PELWAARGLHVA*VLLCCPQSQEG
Trigger: CCCCTCCTGCGACTGTGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGCCCACAGCTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CGTGGCCTTGGGTGCTTGGGAGGTGAAGGGACCAGGTaGTGGCTCGAGGTCCCGGAGGGCTCTGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: RGLGCLGGEGTR*WLEVPEGSEAR
Trigger: CCTGGCCTCAGAGCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp TCGCCCCAGAGCTGTGGGCTGCACGTGGCCTGCACGTaGCCTGCGTGCTCCTCTGCTGTCCACAGTCGCAGG +
Preference number: 6 (lower is better)
Translates to: SPQSCGLHVACT*PACSSAVHSRR
Trigger: CCTGCGACTGTGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGCCCACAGCTCTGGGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 72 bp AGGGCCCTTGCTCTGTGGGCAGGGGTTGTGCAGGCCTaGCCAGCTCAGCTCCCGCACCCGGACGCTGGAGGT +
Preference number: 6 (lower is better)
Translates to: RALALWAGVVQA*PAQLPHPDAGG
Trigger: ACCTCCAGCGTCCGGGTGCGGGAGCTGAGCTGGCAAGGCCTGCACAACCCCTGCCCACAGAGCAAGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp CCTGGCACTGGTGCCTACGCTCCCGCAGGCCCTTGGTaGGGTTCCCACAGAGGACTTGGCCAGCACCATGGG +
Preference number: 6 (lower is better)
Translates to: PGTGAYAPAGPW*GSHRGLGQHHG
Trigger: CCCATGGTGCTGGCCAAGTCCTCTGTGGGAACCCCACCAAGGGCCTGCGGGAGCGTAGGCACCAGTGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp GGCCTTGGGTGCTTGGGAGGTGAAGGGACCAGGTGCTaGCTCGAGGTCCCGGAGGGCTCTGAGGCCAGGCTT +
Preference number: 6 (lower is better)
Translates to: GLGCLGGEGTRC*LEVPEGSEARL
Trigger: AAGCCTGGCCTCAGAGCCCTCCGGGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 90 bp GGTCTGTCGACCACCGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTaGGGTGCTTGGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLSTTAGSCCQNLVA*GAWEVKGPGAGSRS
Trigger: GGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTaGTTGGGAGGTGAAGGGACCAGGTGCTGGCTCGAG +
Preference number: 6 (lower is better)
Translates to: RGELLPESRGLG*LGGEGTRCWLE
Trigger: CTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CCCTGGACTGCAGGTCTGTCGACCACCGCGGGGAGCTaGTGCCAGAATCTCGTGGCCTTGGGTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PWTAGLSTTAGS*CQNLVALGAWE
Trigger: CTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 72 bp CGGGGACAGTCCAGCGGGGGAAGGCCGTTGCCCTTCTaGATGGCCTCCTTCACCGCAAGCCAGTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: RGQSSGGRPLPF*MASFTASQSWL
Trigger: GAGCCAGGACTGGCTTGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCTGGACTGTCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 72 bp ACCACCGCGGGGAGCTGCTGCCAGAATCTCGTGGCCTaGGGTGCTTGGGAGGTGAAGGGACCAGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TTAGSCCQNLVA*GAWEVKGPGAG
Trigger: GCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 72 bp GGGGACAGTCCAGCGGGGGAAGGCCGTTGCCCTTCTTaGTGGCCTCCTTCACCGCAAGCCAGTCCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: GDSPAGEGRCPS*WPPSPQASPGS
Trigger: TGAGCCAGGACTGGCTTGCGGTGAAGGAGGCCATCAAGAAGGGCAACGGCCTTCCCCCGCTGGACTGTCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp TGGACTGCAGGTCTGTCGACCACCGCGGGGAGCTGCTaGCAGAATCTCGTGGCCTTGGGTGCTTGGGAGGTG +
Preference number: 6 (lower is better)
Translates to: WTAGLSTTAGSC*QNLVALGAWEV
Trigger: CACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCCGCGGTGGTCGACAGACCTGCAGTCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp CCCAGAGACGTGCCCAAGTCCCTCAGGGAGCCCAGGTaGCTGCCGTTCAGCTTCAGTTGGTCCAGGTTGGGC +
Preference number: 6 (lower is better)
Translates to: PRDVPKSLREPR*LPFSFSWSRLG
Trigger: GCCCAACCTGGACCAACTGAAGCTGAACGGCAGCCACCTGGGCTCCCTGAGGGACTTGGGCACGTCTCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp GGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTGCTTaGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GSCCQNLVALGA*EVKGPGAGSRS
Trigger: GGACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 72 bp GGGGAGCTGCTGCCAGAATCTCGTGGCCTTGGGTGCTaGGGAGGTGAAGGGACCAGGTGCTGGCTCGAGGTC +
Preference number: 6 (lower is better)
Translates to: GELLPESRGLGC*GGEGTRCWLEV
Trigger: GACCTCGAGCCAGCACCTGGTCCCTTCACCTCCCAAGCACCCAAGGCCACGAGATTCTGGCAGCAGCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp CCAGGTTGGGCAGGTGCACCCCAAAGTTCCCCAGGCTaGCCTCACGAGTGTCCACACACATCTCCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: PGWAGAPQSSPG*PHECPHTSPAS
Trigger: GGACGCTGGAGATGTGTGTGGACACTCGTGAGGGCAGCCTGGGGAACTTTGGGGTGCACCTGCCCAACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp GAGACGTGCCCAAGTCCCTCAGGGAGCCCAGGTGGCTaGCGTTCAGCTTCAGTTGGTCCAGGTTGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ETCPSPSGSPGG*RSASVGPGWAG
Trigger: ACCTGCCCAACCTGGACCAACTGAAGCTGAACGGCAGCCACCTGGGCTCCCTGAGGGACTTGGGCACGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp GCTGCACGTGGCCTGCACGTGGCCTGCGTGCTCCTCTaGTGTCCACAGTCGCAGGAGGGGATGCTCAAATAT +
Preference number: 6 (lower is better)
Translates to: AARGLHVACVLL*CPQSQEGMLKY
Trigger: ATATTTGAGCATCCCCTCCTGCGACTGTGGACAGCAGAGGAGCACGCAGGCCACGTGCAGGCCACGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS GCA 72 bp GCAAGTAGCGCACCTGCCCCAGGTCCTCCACGCTGTTaGCCTCCAGGTCCAGCACCTCCAATTGTTCCAGCA +
Preference number: 6 (lower is better)
Translates to: ASSAPAPGPPRC*PPGPAPPIVPA
Trigger: TGCTGGAACAATTGGAGGTGCTGGACCTGGAGGGCAACAGCGTGGAGGACCTGGGGCAGGTGCGCTACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CCA 72 bp CAGGTCCAGCACCTCCAATTGTTCCAGCAGGCACAGTaGGCTCAGGTCCGAGATGTTGTTGTAGGAGGCGTA +
Preference number: 6 (lower is better)
Translates to: QVQHLQLFQQAQ*AQVRDVVVGGV
Trigger: TACGCCTCCTACAACAACATCTCGGACCTGAGCCCACTGTGCCTGCTGGAACAATTGGAGGTGCTGGACCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 72 bp GGCCATGGCTTTTATCTGTTGACCACGTGTGGACACTaGAGATGCATCCTCTCCATCCCGTCTAGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: GHGFYLLTTCGH*RCILSIPSRAA
Trigger: GGCAGCTCTAGACGGGATGGAGAGGATGCATCTTCAGTGTCCACACGTGGTCAACAGATAAAAGCCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS CAA 72 bp TGCTGTCCACAGTCGCAGGAGGGGATGCTCAAATATTaGTCGAAGGAATCCGTGAACAGGCAGATGCACATG +
Preference number: 6 (lower is better)
Translates to: CCPQSQEGMLKY*SKESVNRQMHM
Trigger: CATGTGCATCTGCCTGTTCACGGATTCCTTCGACAAATATTTGAGCATCCCCTCCTGCGACTGTGGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2
CDS TCA 72 bp AGGAGGGGATGCTCAAATATTTGTCGAAGGAATCCGTaGACAGGCAGATGCACATGTAGCCACTTAGAACGT +
Preference number: 6 (lower is better)
Translates to: RRGCSNICRRNP*TGRCTCSHLER
Trigger: ACGTTCTAAGTGGCTACATGTGCATCTGCCTGTTCACGGATTCCTTCGACAAATATTTGAGCATCCCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270115.8
ENST00000611111.2