RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRRC55 (Homo sapiens)

Ensembl gene IDs: ENSG00000183908

Ensembl transcript IDs: ENST00000497933.3, ENST00000652194.1

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCTGGTGGAAGGAGGCCAGGGGCTGTC +
Preference number: 1 (lower is better)
Translates to: HQLVTFGHMGAVTGR*SHLVAAGGRRPGAV
Trigger: GACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp GGGACCTCACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTaGGAGGTGGTCTCACCTGGTAGCTGCTGGTGGAAGGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: GTSPTGDIWSYGGSH*EVVSPGSCWWKEAR
Trigger: CCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTGAGGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp TATGGGGGCAGTCACTGGGAGGTGGTCTCACCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGTCATAGAGGTGTTCTTACTCCCTGT +
Preference number: 1 (lower is better)
Translates to: YGGSHWEVVSPGSCW*KEARGCHRGVLTPC
Trigger: ACAGGGAGTAAGAACACCTCTATGACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp TCATATGGGGGCAGTCACTGGGAGGTGGTCTCACCTGGTAGCTGCTaGTGGAAGGAGGCCAGGGGCTGTCATAGAGGTGTTCTTACTCCC +
Preference number: 1 (lower is better)
Translates to: SYGGSHWEVVSPGSC*WKEARGCHRGVLTP
Trigger: GGGAGTAAGAACACCTCTATGACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp TGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACCTGGTAGCTaGTGGTGGAAGGAGGCCAGGGGCTGTCATAGAGGTGTTCTTACT +
Preference number: 1 (lower is better)
Translates to: WSYGGSHWEVVSPGS*WWKEARGCHRGVLT
Trigger: AGTAAGAACACCTCTATGACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp ATGGTCATAACTGTGCTGCCTTTGTCCCCTTTTAGCTCTGGGTGCTaGCAGGCTGTGGGTCTGTGGCCCACAGTGCACTTTCCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: MVITVLPLSPFSSGC*QAVGLWPTVHFPGE
Trigger: CTCACCAGGAAAGTGCACTGTGGGCCACAGACCCACAGCCTGGCAGCACCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTATGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp CTGGTGAGACCCTGTGGCATGAGCACTGTGGCAAGAACAGTCACATaGTTAGGATCCCAAGGTGCCAGGACTCTTGCTGCCCCAGTTGCT +
Preference number: 1 (lower is better)
Translates to: LVRPCGMSTVARTVT*LGSQGARTLAAPVA
Trigger: AGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTGACTGTTCTTGCCACAGTGCTCATGCCACAGGGTCTCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp GGCAAGAACAGTCACATGATTAGGATCCCAAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCCTCCTGCCTCTCTCTTCTGAAGCAA +
Preference number: 1 (lower is better)
Translates to: GKNSHMIRIPRCQDS*CPSCWASCLSLLKQ
Trigger: TTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTGACTGTTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp GCTGTGGGTCTGTGGCCCACAGTGCACTTTCCTGGTGAGACCCTGTaGCATGAGCACTGTGGCAAGAACAGTCACATGATTAGGATCCCA +
Preference number: 1 (lower is better)
Translates to: AVGLWPTVHFPGETL*HEHCGKNSHMIRIP
Trigger: TGGGATCCTAATCATGTGACTGTTCTTGCCACAGTGCTCATGCCACAGGGTCTCACCAGGAAAGTGCACTGTGGGCCACAGACCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp CAGTTGCTGGGCCTCCTGCCTCTCTCTTCTGAAGCAAAACTTGAGTaGGAGGCAGGAGCAAGGGCATTGAAAGTGTCCATCCTCAGCCTG +
Preference number: 1 (lower is better)
Translates to: QLLGLLPLSSEAKLE*EAGARALKVSILSL
Trigger: CAGGCTGAGGATGGACACTTTCAATGCCCTTGCTCCTGCCTCTCACTCAAGTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp CACATGATTAGGATCCCAAGGTGCCAGGACTCTTGCTGCCCCAGTTaGTGGGCCTCCTGCCTCTCTCTTCTGAAGCAAAACTTGAGTGAG +
Preference number: 1 (lower is better)
Translates to: HMIRIPRCQDSCCPS*WASCLSLLKQNLSE
Trigger: CTCACTCAAGTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp ATGATTAGGATCCCAAGGTGCCAGGACTCTTGCTGCCCCAGTTGCTaGGCCTCCTGCCTCTCTCTTCTGAAGCAAAACTTGAGTGAGAGG +
Preference number: 1 (lower is better)
Translates to: MIRIPRCQDSCCPSC*ASCLSLLKQNLSER
Trigger: CCTCTCACTCAAGTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp AAGAACAGTCACATGATTAGGATCCCAAGGTGCCAGGACTCTTGCTaGCCCAGTTGCTGGGCCTCCTGCCTCTCTCTTCTGAAGCAAAAC +
Preference number: 1 (lower is better)
Translates to: KNSHMIRIPRCQDSC*PSCWASCLSLLKQN
Trigger: GTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTGACTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp AGCAGATGCTCATACAAAATGAGTGTCCCCACCTTGCTTGAACCATaGCTGAGGCAGCCAGGTCACCATGGAACCAGAGTGAGCAGTCAG +
Preference number: 1 (lower is better)
Translates to: SRCSYKMSVPTLLEP*LRQPGHHGTRVSSQ
Trigger: CTGACTGCTCACTCTGGTTCCATGGTGACCTGGCTGCCTCAGTCATGGTTCAAGCAAGGTGGGGACACTCATTTTGTATGAGCATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp TATTTAGCCACTCAGCCTATGGCTGAGTGGACTATGTCAGAGAACTaGACCCAAGTTCTAGAGAGATCTGTCCCAAGTCAGCGGACAGCC +
Preference number: 1 (lower is better)
Translates to: YLATQPMAEWTMSEN*TQVLERSVPSQRTA
Trigger: GGCTGTCCGCTGACTTGGGACAGATCTCTCTAGAACTTGGGTTCAGTTCTCTGACATAGTCCACTCAGCCATAGGCTGAGTGGCTAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp GGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTaGTCTGTTCAAATTTCATACATGTCCCTCCTCGAAAGGAGCCAT +
Preference number: 1 (lower is better)
Translates to: GSWRSSPMVEDKHLS*SVQISYMSLLERSH
Trigger: ATGGCTCCTTTCGAGGAGGGACATGTATGAAATTTGAACAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp CATATTCTGGCCTCTGCCATGTGCAGACACCCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTGATGACCCAGTTCACAAATCACTCT +
Preference number: 1 (lower is better)
Translates to: HILASAMCRHPSLPT*QSRYFLMTQFTNHS
Trigger: AGAGTGATTTGTGAACTGGGTCATCAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAGAATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp CCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTaGCTTCTATTTAGCTTATCCACTAGCACATTCATGGATGCTGAA +
Preference number: 1 (lower is better)
Translates to: PYREHSSICTADGFG*LLFSLSTSTFMDAE
Trigger: TTCAGCATCCATGAATGTGCTAGTGGATAAGCTAAATAGAAGGCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp TATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTG +
Preference number: 1 (lower is better)
Translates to: YSGVTCVVSVSEPAI*PTVSIVQSVQQMGL
Trigger: CAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp AGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTaGAATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGAT +
Preference number: 1 (lower is better)
Translates to: SLLFRCYLCSLCFRA*NLPYREHSSICTAD
Trigger: ATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp AATCACTCTAATCTTATAATTCTCATGGACATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCCTCCATAATGACGTGCTCAGAGTCC +
Preference number: 1 (lower is better)
Translates to: NHSNLIILMDIARYR*WLLLWASIMTCSES
Trigger: GGACTCTGAGCACGTCATTATGGAGGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAATGTCCATGAGAATTATAAGATTAGAGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp TTGATCTGTTCAAATTTCATACATGTCCCTCCTCGAAAGGAGCCATaGACCTCTGTAGCAACTCTGGAGACCTATTTCTGCAAAGTTCCC +
Preference number: 1 (lower is better)
Translates to: LICSNFIHVPPRKEP*TSVATLETYFCKVP
Trigger: GGGAACTTTGCAGAAATAGGTCTCCAGAGTTGCTACAGAGGTTCATGGCTCCTTTCGAGGAGGGACATGTATGAAATTTGAACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 90 bp TCTCTCACCCTCATGCTTAACGTGGGTAAGTTGCTTAGAAGAAAATaGAAAGCCTCATATGGTCATAACTGTGCTGCCTTTGTCCCCTTT +
Preference number: 1 (lower is better)
Translates to: SLTLMLNVGKLLRRK*KASYGHNCAAFVPF
Trigger: AAAGGGGACAAAGGCAGCACAGTTATGACCATATGAGGCTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGGTGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 90 bp CTCTTAGTATCTCTTGCAACACACGCAGCAGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTCTTGATTCCCAAAGATCTTACTTTT +
Preference number: 1 (lower is better)
Translates to: LLVSLATHAAGLEQE*LTQLPFLIPKDLTF
Trigger: AAAAGTAAGATCTTTGGGAATCAAGAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCCTGCTGCGTGTGTTGCAAGAGATACTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp TTTAGGCATGCTTATTTATGCATATTTAGCCACTCAGCCTATGGCTaGGTGGACTATGTCAGAGAACTGAACCCAAGTTCTAGAGAGATC +
Preference number: 1 (lower is better)
Translates to: FRHAYLCIFSHSAYG*VDYVRELNPSSREI
Trigger: GATCTCTCTAGAACTTGGGTTCAGTTCTCTGACATAGTCCACTCAGCCATAGGCTGAGTGGCTAAATATGCATAAATAAGCATGCCTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 90 bp TGTTTGATTTACCTCCTGCACAGGGATGTGAAAAGTCAAGGAGAATaGTGCAAAAATACTCATGAACTATCCGGTGCTGAACAAATAGAG +
Preference number: 1 (lower is better)
Translates to: CLIYLLHRDVKSQGE*CKNTHELSGAEQIE
Trigger: CTCTATTTGTTCAGCACCGGATAGTTCATGAGTATTTTTGCATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGAGGTAAATCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGAGGGAGGGCGTCTGGTaGCCAGCAGCTGTGGCGGTC +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLREGVW*PAAVAV
Trigger: GACCGCCACAGCTGCTGGCCACCAGACGCCCTCCCT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGGTGGCCAGCAGCTGTaGCGGTCAGCAGCATGGAGG +
Preference number: 2 (lower is better)
Translates to: NLPYREHSSICTADGFGCGGQQL*RSAAWR
Trigger: CCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGACAGAGGGAAGTGCCTTaGGGGCAGGGACTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRQREVP*GQGLSQ
Trigger: CTGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTG...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: NLPYREHSSICTADGFGCRCQDS*CPSCWA
Trigger: GGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGGTGGCCAGCAGCTGTaGCGGTCAGCAGCATGGAGG +
Preference number: 2 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAGGQQL*RSAAWR
Trigger: CCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCTGCCCCAGTTGCTaGGCCTCCTGCCTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRCCPSC*ASCLSL
Trigger: AAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGGTGCTGCCAGGCTGTaGGTCTGTGGCCCACAGTGC +
Preference number: 2 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAGAARL*VCGPQC
Trigger: GCACTGTGGGCCACAGACCCACAGCCTGGCAGCACC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGTCAGGGAAGCACGAGTaGGGGATGCCTTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLSGKHE*GMPSWK
Trigger: CTTCCAGGAAGGCATCCCTCACTCGTGCTTCCCTGA...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAGTCTCACCTGGTAGCTaGTGGTGGAAGGAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKVSPGS*WWKEAR
Trigger: CCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGAC...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTGCCAGGACTCTTGCTaGCCCAGTTGCTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCCQDSC*PSCWAS
Trigger: GGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQAVTGR*SHLVAA
Trigger: AGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCCTGGTGAGACCCTGTaGCATGAGCACTGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLPGETL*HEHCGK
Trigger: CTTGCCACAGTGCTCATGCCACAGGGTCTCACCAGG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp AGGTTGCTGGCCTGGCTTGTAGAGAACAACTTGAGTTCACCATCCTaGGTCATCACAGAAGGAGAGAGCAGGGCACAGTTCTGCTTCGGA +
Preference number: 2 (lower is better)
Translates to: RLLAWLVENNLSSPS*VITEGESRAQFCFG
Trigger: TCCGAAGCAGAACTGTGCCCTGCTCTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAAGTTGTTCTCTACAAGCCAGGCCAGCAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGTGCTTGAACCATGACTaGGGCAGCCAGGTCACCATG +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQCLNHD*GSQVTM
Trigger: CATGGTGACCTGGCTGCCTCAGTCATGGTTCAAGCA...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCAGGGAAGCACGAGTaGGGGATGCCTTCCTGGAAG +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSGKHE*GMPSWK
Trigger: CTTCCAGGAAGGCATCCCTCACTCGTGCTTCCCTGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATTTAGCTCTGGGTGCTaGCAGGCTGTGGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKFSSGC*QAVGLW
Trigger: CCACAGACCCACAGCCTGGCAGCACCCAGAGCTAAA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAACTCCCTGTAGGCAGTaGCTGGCATTGCTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRTPCRQ*LALLRA
Trigger: AGCTCTCAGCAATGCCAGCCACTGCCTACAGGGAGT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATCCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: IPKDLTFHMTATMATIADPGSCW*KEARGC
Trigger: ACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGG...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACCTGGTGAGACCCTGTaGCATGAGCACTGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKPGETL*HEHCGK
Trigger: CTTGCCACAGTGCTCATGCCACAGGGTCTCACCAGG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACAGGCTGTGGGTCTGTaGCCCACAGTGCACTTTCCT +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKQAVGL*PTVHFP
Trigger: AGGAAAGTGCACTGTGGGCCACAGACCCACAGCCTG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAATACCGCTGGAGCTTaGGGCAAGGGAGGTGTGGAA +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQNTAGA*GKGGVE
Trigger: TTCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTTGTCCCCACCTTGCTTaGACCATGACTGAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPCPHLA*TMTEAA
Trigger: GGCTGCCTCAGTCATGGTTCAAGCAAGGTGGGGACA...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACAGAGGGAAGTGCCTTaGGGGCAGGGACTGAGTCAG +
Preference number: 2 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLQREVP*GQGLSQ
Trigger: CTGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACACGTGCTCAGAGTCCTaGCATATAGTCTTAAAGGGA +
Preference number: 2 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHTCSES*HIVLKG
Trigger: TCCCTTTAAGACTATATGTCAGGACTCTGAGCACGT...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLIARYR*WLLLWA
Trigger: GGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAAT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAGTGGCTGGCATTGCTaGGAGCTGACAGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRSGWHC*ELTVLV
Trigger: CACCAAAACTGTCAGCTCTCAGCAATGCCAGCCACT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACCATCCTCAGCCTGCTaGCTGGGACCTCACCAACTG +
Preference number: 2 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLPSSAC*LGPHQL
Trigger: CAGTTGGTGAGGTCCCAGGCAGCAGGCTGAGGATGG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCCATCCTCAGCCTGCTaGCTGGGACCTCACCAACTG +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNPSSAC*LGPHQL
Trigger: CAGTTGGTGAGGTCCCAGGCAGCAGGCTGAGGATGG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGTTGCTGGGCCTCCTaGCTCTCTCTTCTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQSCWAS*LSLLKQ
Trigger: TTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVRCQDS*CPSCWA
Trigger: GGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGTCTGTGGCCCACAGTaGACTTTCCTGGTGAGACCC +
Preference number: 2 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPVCGPQ*TFLVRP
Trigger: GGGTCTCACCAGGAAAGTGCACTGTGGGCCACAGAC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGCCTTTTAGCTCTGGGTaGTGCCAGGCTGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKPFSSG*CQAVGL
Trigger: CAGACCCACAGCCTGGCAGCACCCAGAGCTAAAAGG...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGT +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMPGSCW*KEARGC
Trigger: ACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCT +
Preference number: 2 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPAVTGR*SHLVAA
Trigger: AGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCTGCAGTTTCCCTGAATaGAGCTGCCTACCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: NLPYREHSSICTADGFGCCSFPE*SCLPPS
Trigger: GGAAGGCGGTAGGCAGCTCCATTCAGGGAAACTGCA...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGGCTTTCCAGGAGGATaGGCTGATAGAATACCGCTG +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRGFPGG*ADRIPL
Trigger: CAGCGGTATTCTATCAGCCCATCCTCCTGGAAAGCC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp CCTCTCCAAGTATTTAGGTTGCTGGCCTGGCTTGTAGAGAACAACTaGAGTTCACCATCCTTGGTCATCACAGAAGGAGAGAGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: PLQVFRLLAWLVENN*SSPSLVITEGESRA
Trigger: TGCCCTGCTCTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAAGTTGTTCTCTACAAGCCAGGCCAGCAACCTAAATACTTGGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCACCATGGAACCAGAGTaGGCAGTCAGGGAGGGCGTC +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPTMEPE*AVREGV
Trigger: GACGCCCTCCCTGACTGCTCACTCTGGTTCCATGGT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTGCTTGAACCATGACTaGGGCAGCCAGGTCACCATG +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCCLNHD*GSQVTM
Trigger: CATGGTGACCTGGCTGCCTCAGTCATGGTTCAAGCA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGTTTGGTGTCAGGAGGTaGGGGGTAGGTTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLFGVRR*GVGLSS
Trigger: AGAACTCAAACCTACCCCTCACCTCCTGACACCAAA...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCACATTCATGGATGCTaGATTCCAGGGCCCCACTAC +
Preference number: 2 (lower is better)
Translates to: NLPYREHSSICTADGFGCHIHGC*IPGPHY
Trigger: GTAGTGGGGCCCTGGAATTCAGCATCCATGAATGTG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACAGCAGGGCACAGTTCTaGTTCGGATGTCACAGGGCC +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNSRAQF*FGCHRA
Trigger: GGCCCTGTGACATCCGAAGCAGAACTGTGCCCTGCT...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTGGCGGTCAGCAGCATaGAGGGATGAGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSWRSAA*RDERQA
Trigger: TGCCTGCCTCTCATCCCTCCATGCTGCTGACCGCCA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGACTCCCTGTAGGCAGTaGCTGGCATTGCTGAGAGCT +
Preference number: 2 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKTPCRQ*LALLRA
Trigger: AGCTCTCAGCAATGCCAGCCACTGCCTACAGGGAGT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTATGGGGGCAGTCACTaGGAGGTGGTCTCACCTGGT +
Preference number: 2 (lower is better)
Translates to: IPKDLTFHMTATMATIADYGGSH*EVVSPG
Trigger: ACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGGTGCTGCCAGGCTGTaGGTCTGTGGCCCACAGTGC +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDGAARL*VCGPQC
Trigger: GCACTGTGGGCCACAGACCCACAGCCTGGCAGCACC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATACCTTGCTTGAACCATaGCTGAGGCAGCCAGGTCAC +
Preference number: 2 (lower is better)
Translates to: IPKDLTFHMTATMATIADTLLEP*LRQPGH
Trigger: GTGACCTGGCTGCCTCAGTCATGGTTCAAGCAAGGT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTGTCCCCACCTTGCTTaGACCATGACTGAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSCPHLA*TMTEAA
Trigger: GGCTGCCTCAGTCATGGTTCAAGCAAGGTGGGGACA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCCTGAGTCAGTTCATCTaGTGTTCCCAATTCCTAGCG +
Preference number: 2 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLLSQFI*CSQFLA
Trigger: CGCTAGGAATTGGGAACATCAGATGAACTGACTCAG...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGGCATTGCTGAGAGCTaGCAGTTTTGGTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCGIAES*QFWCQE
Trigger: CTCCTGACACCAAAACTGTCAGCTCTCAGCAATGCC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAAGTGGCTGGCATTGCTaGGAGCTGACAGTTTTGGTG +
Preference number: 2 (lower is better)
Translates to: QLGWGSRKSTDFILLIVASGWHC*ELTVLV
Trigger: CACCAAAACTGTCAGCTCTCAGCAATGCCAGCCACT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCGAAGACTCTTTTGGTTaGCTAGCTCAGGGAAGCACG +
Preference number: 2 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTEDSFG*LAQGST
Trigger: CGTGCTTCCCTGAGCTAGTCAACCAAAAGAGTCTTC...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGTGGCCCAAAGTGATGTaGTTCAGATATGAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLWPKVM*FRYEGS
Trigger: AGAGCCCTCATATCTGAATCACATCACTTTGGGCCA...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTGCCAGGACTCTTGCTaGCCCAGTTGCTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDCQDSC*PSCWAS
Trigger: GGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGTCTGTGGCCCACAGTaGACTTTCCTGGTGAGACCC +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMVCGPQ*TFLVRP
Trigger: GGGTCTCACCAGGAAAGTGCACTGTGGGCCACAGAC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTTTAGCTCTGGGTGCTaGCAGGCTGTGGGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPFSSGC*QAVGLW
Trigger: CCACAGACCCACAGCCTGGCAGCACCCAGAGCTAAA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCCTTTTAGCTCTGGGTaGTGCCAGGCTGTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMPFSSG*CQAVGL
Trigger: CAGACCCACAGCCTGGCAGCACCCAGAGCTAAAAGG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGACACTATGCATATTCTaGCCTCTGCCATGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQTLCIF*PLPCAD
Trigger: GTCTGCACATGGCAGAGGCCAGAATATGCATAGTGT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTGCAGTTTCCCTGAATaGAGCTGCCTACCGCCTTCC +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNCSFPE*SCLPPS
Trigger: GGAAGGCGGTAGGCAGCTCCATTCAGGGAAACTGCA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCGATGCTCATACAAAATaGGTGTCCCCACCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTDAHTK*VSPPCL
Trigger: CAAGCAAGGTGGGGACACTCATTTTGTATGAGCATC...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAACGTGCTCAGAGTCCTaGCATATAGTCTTAAAGGGA +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRTCSES*HIVLKG
Trigger: TCCCTTTAAGACTATATGTCAGGACTCTGAGCACGT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACGACCTCACCAACTGGTaGCATTTGGTCATATGGGGG +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNDLTNW*HLVIWG
Trigger: CCCCCATATGACCAAATGTCACCAGTTGGTGAGGTC...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGACAGGCAGTGTTGCTGTaGGAATTGAAAGAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRQAVLL*ELKEVS
Trigger: ACTCACTTCTTTCAATTCTCACAGCAACACTGCCTG...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAGGATTACTGATGTTTaGTTTACCTCCTGCACAGGG +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRRITDV*FTSCTG
Trigger: CCCTGTGCAGGAGGTAAATCAAACATCAGTAATCCT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCACTACCCAGCCTTCTaGGGCATTCTCTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMHYPAF*GILFPK
Trigger: CTTGGGGAAGAGAATGCCTCAGAAGGCTGGGTAGTG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAACACGCAGCAGGGCTTaGGCAGGAGTGGTTAACACA +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVTRSRA*AGVVNT
Trigger: TGTGTTAACCACTCCTGCTCAAGCCCTGCTGCGTGT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCTGGCCTCTGCCATGTaGAGACACCCTTCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSLASAM*RHPSLP
Trigger: AGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACTGGCCTCTGCCATGTaGAGACACCCTTCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVLASAM*RHPSLP
Trigger: AGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGCTCTCTCACCCTCATaGTTAACGTGGGTAAGTTGC +
Preference number: 2 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAALSPS*LTWVSC
Trigger: GCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGTCTCTGAGCCTTAGTTaGCTCATCCGTAAAATGGGA +
Preference number: 2 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQSLSLS*LIRKMG
Trigger: TCCCATTTTACGGATGAGGCAACTAAGGCTCAGAGA...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTT +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSEPAI*PTVSIV
Trigger: AACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATACTTTTCACATGACTaGCACCATGGCCACCATTGC +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKYFSHD*HHGHHC
Trigger: GCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAAACTGAGAGCTCTGTaGATCCAGCTCTCCGCCCAG +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPKLRAL*IQLSAQ
Trigger: CTGGGCGGAGAGCTGGATCCACAGAGCTCTCAGTTT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAACCATGGAACCAGAGTaGGCAGTCAGGGAGGGCGTC +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLTMEPE*AVREGV
Trigger: GACGCCCTCCCTGACTGCTCACTCTGGTTCCATGGT...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCTGAGTCAGTTCATCTaGTGTTCCCAATTCCTAGCG +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCLSQFI*CSQFLA
Trigger: CGCTAGGAATTGGGAACATCAGATGAACTGACTCAG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATCTTGAGGGCAGGGACTaGGTCAGTTCATCTGATGTT +
Preference number: 2 (lower is better)
Translates to: IPKDLTFHMTATMATIADLEGRD*VSSSDV
Trigger: AACATCAGATGAACTGACTCAGTCCCTGCCCTCAAG...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCC +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMIARYR*WLLLWA
Trigger: GGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAAT...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCCCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTG +
Preference number: 2 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLPSLPT*QSRYFL
Trigger: CAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGG...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGACCTCACCAACTGGTaGCATTTGGTCATATGGGGG +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSDLTNW*HLVIWG
Trigger: CCCCCATATGACCAAATGTCACCAGTTGGTGAGGTC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGCAAGAACAGTCACATaGTTAGGATCCCAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: IPKDLTFHMTATMATIADARTVT*LGSQGA
Trigger: GGCACCTTGGGATCCTAATCATGTGACTGTTCTTGC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCCTGCACAGGGATGTaGAAAGTCAAGGAGAATGAT +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSCTGM*KVKEND
Trigger: ATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATGCCTTCCTGGAAGATaGCTTATTAGCCTCCTTCAT +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKCLPGR*LISLLH
Trigger: ATGAAGGAGGCTAATAAGTCATCTTCCAGGAAGGCA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCTCTGAGCCTTAGTTaGCTCATCCGTAAAATGGGA +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSLSLS*LIRKMG
Trigger: TCCCATTTTACGGATGAGGCAACTAAGGCTCAGAGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAGCAGATGGGTTTGGCTaGCTTCTATTTAGCTTATCC +
Preference number: 2 (lower is better)
Translates to: SSASDVTGPGICPRCCKKADGFG*LLFSLS
Trigger: GGATAAGCTAAATAGAAGGCAGCCAAACCCATCTGC...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATGGCGGTCAGCAGCATaGAGGGATGAGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLWRSAA*RDERQA
Trigger: TGCCTGCCTCTCATCCCTCCATGCTGCTGACCGCCA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAGGAAGCTTCTGCAATaGGGACAAGTCTCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPRKLLQ*GQVSEA
Trigger: CGCCTCAGAGACTTGTCCCCATTGCAGAAGCTTCCT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp ATGGAGCTGCCTACCGCCTTCCTTCTAGGGCTTATCCAGACAACCTaGGGTAAGTCACTCAACTCTCTACGATTAATTCATCTGTCAAAT +
Preference number: 2 (lower is better)
Translates to: MELPTAFLLGLIQTT*GKSLNSLRLIHLSN
Trigger: ATTTGACAGATGAATTAATCGTAGAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAAGCCCTAGAAGGAAGGCGGTAGGCAGCTCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp CTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGCAATTaGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTT +
Preference number: 2 (lower is better)
Translates to: LFRCYLCSLCFRACN*PYREHSSICTADGF
Trigger: AAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp GACATACAGATGCAGAGATACCCCATCACATACATGTTAACCAGTTaGGACAATTTGAATGAAGCCTGTGGTCACCAGGGATATGGGAGC +
Preference number: 2 (lower is better)
Translates to: DIQMQRYPITYMLTS*DNLNEACGHQGYGS
Trigger: GCTCCCATATCCCTGGTGACCACAGGCTTCATTCAAATTGTCCAAACTGGTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTCTATACAAGTAAGTaGCCAGGAACTGTTCACTCT +
Preference number: 2 (lower is better)
Translates to: NLPYREHSSICTADGFGCLYTSK*PGTVHS
Trigger: AGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATTTGGTGTCAGGAGGTaGGGGGTAGGTTTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVFGVRR*GVGLSS
Trigger: AGAACTCAAACCTACCCCTCACCTCCTGACACCAAA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGAAGACTCTTTTGGTTaGCTAGCTCAGGGAAGCACG +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSEDSFG*LAQGST
Trigger: CGTGCTTCCCTGAGCTAGTCAACCAAAAGAGTCTTC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCACTCAGCCTATGGCTaGGTGGACTATGTCAGAGAA +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPHSAYG*VDYVRE
Trigger: TTCTCTGACATAGTCCACTCAGCCATAGGCTGAGTG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGCAGACACCCTTCTTTaGCTACCTGACAAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAADTLL*LPDKVD
Trigger: ATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGCTCTCTCACCCTCATaGTTAACGTGGGTAAGTTGC +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSALSPS*LTWVSC
Trigger: GCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTT +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNSEPAI*PTVSIV
Trigger: AACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATCTCTTAGTATCTCTTaGAACACACGCAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLSLSIS*NTRSRA
Trigger: AGCCCTGCTGCGTGTGTTGCAAGAGATACTAAGAGA...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCCCTCATGCTTAACGTaGGTAAGTTGCTTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTPSCLT*VSCLEE
Trigger: TTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVGLEQE*LTQLPF
Trigger: GAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSGLEQE*LTQLPF
Trigger: GAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp AGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATaGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: RLGINGDQIVPLERT*MSRGHLVSFLVLVL
Trigger: TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGGCATTGCTGAGAGCTaGCAGTTTTGGTGTCAGGAG +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDGIAES*QFWCQE
Trigger: CTCCTGACACCAAAACTGTCAGCTCTCAGCAATGCC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGCTTTTCAAAGTACCTaGCACTGGCAAGGGCTTAGT +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSAFQST*HWQGLS
Trigger: ACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGTAAAACAGGATTACTaGTGTTTGATTTACCTCCTG +
Preference number: 2 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRVKQDY*CLIYLL
Trigger: CAGGAGGTAAATCAAACATCAGTAATCCTGTTTTAC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCCAGTTTGGACAATTTaGATGAAGCCTGTGGTCACC +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPPVWTI*MKPVVT
Trigger: GGTGACCACAGGCTTCATTCAAATTGTCCAAACTGG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTGGCCCAAAGTGATGTaGTTCAGATATGAGGGCTCT +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPWPKVM*FRYEGS
Trigger: AGAGCCCTCATATCTGAATCACATCACTTTGGGCCA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCAAAGGGAATAGTTTTTaGATCTCTCTCCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTKGNSF*ISLLDQ
Trigger: CTGGTCAAGGAGAGAGATCCAAAAACTATTCCCTTT...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGACACTATGCATATTCTaGCCTCTGCCATGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMTLCIF*PLPCAD
Trigger: GTCTGCACATGGCAGAGGCCAGAATATGCATAGTGT...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCCAACTGGTGACATTTaGTCATATGGGGGCAGTCAC +
Preference number: 2 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNPTGDI*SYGGSH
Trigger: GTGACTGCCCCCATATGACCAAATGTCACCAGTTGG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGTGTGTCAAAGGGAATaGTTTGTGCAGAGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCVCQRE*FVQRAF
Trigger: AAAAGCTCTCTGCACAAACCATTCCCTTTGACACAC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCACTTGAGAAAGCACTaGAAAGAGAACTGTGTTAGG +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCHLRKH*KENCVR
Trigger: CCTAACACAGTTCTCTTTCCAGTGCTTTCTCAAGTG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACAGGAAGCTTCTGCAATaGGGACAAGTCTCTGAGGCG +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDRKLLQ*GQVSEA
Trigger: CGCCTCAGAGACTTGTCCCCATTGCAGAAGCTTCCT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTCCTCTGGCCTAGCATaGAGGAAGCTTCTGCAATGG +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSSGLA*RKLLQW
Trigger: CCATTGCAGAAGCTTCCTCCATGCTAGGCCAGAGGA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCAGGCAGTGTTGCTGTaGGAATTGAAAGAAGTGAGT +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMQAVLL*ELKEVS
Trigger: ACTCACTTCTTTCAATTCTCACAGCAACACTGCCTG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGTCCTGCACAGGGATGTaGAAAGTCAAGGAGAATGAT +
Preference number: 2 (lower is better)
Translates to: ERLGINGDQIVPLERTLMSCTGM*KVKEND
Trigger: ATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGA...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAAGTTGCTGGGCCTCCTaGCTCTCTCTTCTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLSCWAS*LSLLKQ
Trigger: TTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACT...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCCACTAGCACATTCATaGATGCTGAATTCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDPLAHS*MLNSRA
Trigger: GGCCCTGGAATTCAGCATCCATGAATGTGCTAGTGG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACAATCTGTACAGCAGATaGGTTTGGCTGCCTTCTATT +
Preference number: 2 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNNLYSR*VWLPSI
Trigger: AATAGAAGGCAGCCAAACCCATCTGCTGTACAGATT...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp ATGCAGAGATACCCCATCACATACATGTTAACCAGTTTGGACAATTaGAATGAAGCCTGTGGTCACCAGGGATATGGGAGCAATTCTAAT +
Preference number: 2 (lower is better)
Translates to: MQRYPITYMLTSLDN*NEACGHQGYGSNSN
Trigger: ATTAGAATTGCTCCCATATCCCTGGTGACCACAGGCTTCATTCAAATTGTCCAAACTGGTTAACATGTATGTGATGGGGTATCTCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTG +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVPSLPT*QSRYFL
Trigger: CAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAGCAAGAACAGTCACATaGTTAGGATCCCAAGGTGCC +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLARTVT*LGSQGA
Trigger: GGCACCTTGGGATCCTAATCATGTGACTGTTCTTGC...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCATGGCCACCATTGCTaGTGTTTTATCTACACATTG +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSHGHHC*CFIYTL
Trigger: CAATGTGTAGATAAAACATCAGCAATGGTGGCCATG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCAAAGGGAATGGTTTGTaGAGAGAGCTTTTCAAAGTA +
Preference number: 2 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCKGNGL*RELFKV
Trigger: TACTTTGAAAAGCTCTCTGCACAAACCATTCCCTTT...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATTATCCAGACAACCTTaGGTAAGTCACTCAACTCTC +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVLSRQP*VSHSTL
Trigger: GAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTTATCCAGACAACCTTaGGTAAGTCACTCAACTCTC +
Preference number: 2 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSLSRQP*VSHSTL
Trigger: GAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAATCTGTACAGCAGATaGGTTTGGCTGCCTTCTATT +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPNLYSR*VWLPSI
Trigger: AATAGAAGGCAGCCAAACCCATCTGCTGTACAGATT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAGATGCTCATACAAAATaGGTGTCCCCACCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLDAHTK*VSPPCL
Trigger: CAAGCAAGGTGGGGACACTCATTTTGTATGAGCATC...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAAAAGGGAATAGTTTTTaGATCTCTCTCCTTGACCAG +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVKGNSF*ISLLDQ
Trigger: CTGGTCAAGGAGAGAGATCCAAAAACTATTCCCTTT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCTCTATACAAGTAAGTaGCCAGGAACTGTTCACTCT +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLYTSK*PGTVHS
Trigger: AGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGTAAAACAGGATTACTaGTGTTTGATTTACCTCCTG +
Preference number: 2 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVVKQDY*CLIYLL
Trigger: CAGGAGGTAAATCAAACATCAGTAATCCTGTTTTAC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAGCAGACACCCTTCTTTaGCTACCTGACAAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLADTLL*LPDKVD
Trigger: ATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGC...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATTAACGTGGGTAAGTTaGTTAGAAGAAAATGCAAAG +
Preference number: 2 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLLTWVS*LEENAK
Trigger: CTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAA...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGTGTGTCAAAGGGAATaGTTTGTGCAGAGAGCTTTT +
Preference number: 2 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDVCQRE*FVQRAF
Trigger: AAAAGCTCTCTGCACAAACCATTCCCTTTGACACAC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 90 bp TTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTaGCTTAGAAGAAAATGCAAAGCCTCATATGGTCATAACTGTGCT +
Preference number: 2 (lower is better)
Translates to: LVFNSSLTLMLNVGK*LRRKCKASYGHNCA
Trigger: AGCACAGTTATGACCATATGAGGCTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTTAACGTGGGTAAGTTaGTTAGAAGAAAATGCAAAG +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPLTWVS*LEENAK
Trigger: CTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR GCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTATAGTATTATGGTATaGCCCTATGGGAAACTTTTC +
Preference number: 2 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPYSIMV*PYGKLF
Trigger: GAAAAGTTTCCCATAGGGGCATACCATAATACTATA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp GGGGGCAGTCACTGGGAGGTGGTCTCACCTGGTAGCTaGTGGTGGAAGGAGGCCAGGGGCTGTCATAGAGGT +
Preference number: 3 (lower is better)
Translates to: GGSHWEVVSPGS*WWKEARGCHRG
Trigger: ACCTCTATGACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp CAGGCTTTCCAGGAGGATGGGCTGATAGAATACCGCTaGAGCTTGGGGCAAGGGAGGTGTGGAAAGCCCCTG +
Preference number: 3 (lower is better)
Translates to: QAFQEDGLIEYR*SLGQGRCGKPL
Trigger: CAGGGGCTTTCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATTCTATCAGCCCATCCTCCTGGAAAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp AGGATCCCAAGGTGCCAGGACTCTTGCTGCCCCAGTTaGTGGGCCTCCTGCCTCTCTCTTCTGAAGCAAAAC +
Preference number: 3 (lower is better)
Translates to: RIPRCQDSCCPS*WASCLSLLKQN
Trigger: GTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp AGTCACTGGGAGGTGGTCTCACCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGTCATAGAGGTGTTCTT +
Preference number: 3 (lower is better)
Translates to: SHWEVVSPGSCW*KEARGCHRGVL
Trigger: AAGAACACCTCTATGACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp GTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCTGGTGGAAGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: VTFGHMGAVTGR*SHLVAAGGRRP
Trigger: TGGCCTCCTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp AGTCACATGATTAGGATCCCAAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCCTCCTGCCTCTCTCTT +
Preference number: 3 (lower is better)
Translates to: SHMIRIPRCQDS*CPSCWASCLSL
Trigger: AAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp CCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTaGGAGGTGGTCTCACCTGGTAGCTGCTGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: PTGDIWSYGGSH*EVVSPGSCWWK
Trigger: CTTCCACCAGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp ATCCCAAGGTGCCAGGACTCTTGCTGCCCCAGTTGCTaGGCCTCCTGCCTCTCTCTTCTGAAGCAAAACTTG +
Preference number: 3 (lower is better)
Translates to: IPRCQDSCCPSC*ASCLSLLKQNL
Trigger: CAAGTTTTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCTTGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp GTGTTCTTACTCCCTGTAGGCAGTGGCTGGCATTGCTaGGAGCTGACAGTTTTGGTGTCAGGAGGTGAGGGG +
Preference number: 3 (lower is better)
Translates to: VFLLPVGSGWHC*ELTVLVSGGEG
Trigger: CCCCTCACCTCCTGACACCAAAACTGTCAGCTCTCAGCAATGCCAGCCACTGCCTACAGGGAGTAAGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp CCCTGTGGCATGAGCACTGTGGCAAGAACAGTCACATaGTTAGGATCCCAAGGTGCCAGGACTCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: PCGMSTVARTVT*LGSQGARTLAA
Trigger: GGCAGCAAGAGTCCTGGCACCTTGGGATCCTAATCATGTGACTGTTCTTGCCACAGTGCTCATGCCACAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp TTGGTCATCACAGAAGGAGAGAGCAGGGCACAGTTCTaGTTCGGATGTCACAGGGCCAGGGATTTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: LVITEGESRAQF*FGCHRARDLSQ
Trigger: CTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACTGTGCCCTGCTCTCTCCTTCTGTGATGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp ATATCCTCTGGCCTAGCATGGAGGAAGCTTCTGCAATaGGGACAAGTCTCTGAGGCGCAGGAGAGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: ISSGLAWRKLLQ*GQVSEAQERAE
Trigger: CTCTGCTCTCTCCTGCGCCTCAGAGACTTGTCCCCATTGCAGAAGCTTCCTCCATGCTAGGCCAGAGGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAGAATACCGCTGGAGCTaGGGGCAAGGGAGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: SSASDVTGPGICPRCCKKEYRWS*GQGRCG
Trigger: TCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATTC...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp TCCCAATTCCTAGCGTGCCGCCTGGCCCAAAGCAGATaGTCATACAAAATGAGTGTCCCCACCTTGCTTGAA +
Preference number: 3 (lower is better)
Translates to: SQFLACRLAQSR*SYKMSVPTLLE
Trigger: TTCAAGCAAGGTGGGGACACTCATTTTGTATGAGCATCTGCTTTGGGCCAGGCGGCACGCTAGGAATTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACCAGAGGGAAGTGCCTaGAGGGCAGGGACTGAGTCA +
Preference number: 3 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLPEGSA*RAGTES
Trigger: TGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTGG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCCAGAGGGAAGTGCCTaGAGGGCAGGGACTGAGTCA +
Preference number: 3 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSPEGSA*RAGTES
Trigger: TGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTGG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGAATACCGCTGGAGCTaGGGGCAAGGGAGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVEYRWS*GQGRCG
Trigger: TCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATTC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGTTGCTTCTGATAGCTaGGACAAGATGATGGCGGTG +
Preference number: 3 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQVASDS*DKMMAV
Trigger: CACCGCCATCATCTTGTCCAAGCTATCAGAAGCAAC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp CTTCTCAACACAGCACACTATGCATATTCTGGCCTCTaGCATGTGCAGACACCCTTCTTTGCCTACCTGACA +
Preference number: 3 (lower is better)
Translates to: LLNTAHYAYSGL*HVQTPFFAYLT
Trigger: TGTCAGGTAGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAGAATATGCATAGTGTGCTGTGTTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp GCTGCCTTCTATTTAGCTTATCCACTAGCACATTCATaGATGCTGAATTCCAGGGCCCCACTACCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: AAFYLAYPLAHS*MLNSRAPLPSL
Trigger: AAGGCTGGGTAGTGGGGCCCTGGAATTCAGCATCCATGAATGTGCTAGTGGATAAGCTAAATAGAAGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCATAACTGTGCTGCCTTaGTCCCCTTTTAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTITVLP*SPFSSG
Trigger: CCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTAT...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAGTGATGTTCCCCAACTaGGATGGGGCAGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: SSASDVTGPGICPRCCKKVMFPN*DGAVER
Trigger: TCTTTCTACTGCCCCATCCAAGTTGGGGAACATCAC...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGACCACCATGGCCACCATaGCTGATGTTTTATCTACAC +
Preference number: 3 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRPPWPP*LMFYLH
Trigger: GTGTAGATAAAACATCAGCAATGGTGGCCATGGTGG...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGCCACCATGGCCACCATaGCTGATGTTTTATCTACAC +
Preference number: 3 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQPPWPP*LMFYLH
Trigger: GTGTAGATAAAACATCAGCAATGGTGGCCATGGTGG...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp GCCTCTGCCATGTGCAGACACCCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTGATGACCCAGTTCACA +
Preference number: 3 (lower is better)
Translates to: ASAMCRHPSLPT*QSRYFLMTQFT
Trigger: TGTGAACTGGGTCATCAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGCACATGGCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp TCCTGGCCAGACTTATCAGCATGTTGGACTGTGCCTTaGTGTTCTTCTCCTAAACTGCAGAGGTTCTCACCT +
Preference number: 3 (lower is better)
Translates to: SWPDLSACWTVP*CSSPKLQRFSP
Trigger: AGGTGAGAACCTCTGCAGTTTAGGAGAAGAACATCAAGGCACAGTCCAACATGCTGATAAGTCTGGCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp ACTCAGCCTATGGCTGAGTGGACTATGTCAGAGAACTaGACCCAAGTTCTAGAGAGATCTGTCCCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: TQPMAEWTMSEN*TQVLERSVPSQ
Trigger: CTGACTTGGGACAGATCTCTCTAGAACTTGGGTTCAGTTCTCTGACATAGTCCACTCAGCCATAGGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp TCTCCTCCTGGCCAGACTTATCAGCATGTTGGACTGTaGCTTGATGTTCTTCTCCTAAACTGCAGAGGTTCT +
Preference number: 3 (lower is better)
Translates to: SPPGQTYQHVGL*LDVLLLNCRGS
Trigger: AGAACCTCTGCAGTTTAGGAGAAGAACATCAAGGCACAGTCCAACATGCTGATAAGTCTGGCCAGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp GTTCACTCTTCTCAACACAGCACACTATGCATATTCTaGCCTCTGCCATGTGCAGACACCCTTCTTTGCCTA +
Preference number: 3 (lower is better)
Translates to: VHSSQHSTLCIF*PLPCADTLLCL
Trigger: TAGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAGAATATGCATAGTGTGCTGTGTTGAGAAGAGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CCA 72 bp TCTCTTGCAACACACGCAGCAGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTCTTGATTCCCAAAGAT +
Preference number: 3 (lower is better)
Translates to: SLATHAAGLEQE*LTQLPFLIPKD
Trigger: ATCTTTGGGAATCAAGAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCCTGCTGCGTGTGTTGCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATAGGCAGTGGCTGGCATaGCTGAGAGCTGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: IPKDLTFHMTATMATIADRQWLA*LRADSF
Trigger: AAAACTGTCAGCTCTCAGCAATGCCAGCCACTGCCT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCTTCTGAAGCAAAACTaGAGTGAGAGGCAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTLLKQN*SERQEQ
Trigger: TTGCTCCTGCCTCTCACTCAAGTTTTGCTTCAGAAG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTATAACTGTGCTGCCTTaGTCCCCTTTTAGCTCTGGG +
Preference number: 3 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPITVLP*SPFSSG
Trigger: CCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTAT...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCTTGAGTTCACCATCCTaGGTCATCACAGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTLSSPS*VITEGE
Trigger: CTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAA...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGATGTCAAGGGGGCATTaGGTGTCTTTTCTGGTTCTA +
Preference number: 3 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQMSRGH*VSFLVL
Trigger: TAGAACCAGAAAAGACACCAAATGCCCCCTTGACAT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGTCAAAGGGAATGGTTaGTGCAGAGAGCTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRVKGNG*CRELFK
Trigger: TTTGAAAAGCTCTCTGCACAAACCATTCCCTTTGAC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAAGCACAGACTTTATCTaGCTCATAGTGGCATGTGAC +
Preference number: 3 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSTDFI*LIVACD
Trigger: GTCACATGCCACTATGAGCAAGATAAAGTCTGTGCT...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCTCTTCCCCAAGCACTaGAGAAAGCACTGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNLFPKH*RKHWKE
Trigger: CTCTTTCCAGTGCTTTCTCAAGTGCTTGGGGAAGAG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCTTGGCAGTAGGGAGGTaGAATACTTTCCTCATTGTG +
Preference number: 3 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTLAVGR*NTFLIV
Trigger: CACAATGAGGAAAGTATTCAACCTCCCTACTGCCAA...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACGTTGCTTCTGATAGCTaGGACAAGATGATGGCGGTG +
Preference number: 3 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNVASDS*DKMMAV
Trigger: CACCGCCATCATCTTGTCCAAGCTATCAGAAGCAAC...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp GTTACCTGTGTAGTCTCTGTTTCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTTCAATCTGTACAGCAG +
Preference number: 3 (lower is better)
Translates to: VTCVVSVSEPAI*PTVSIVQSVQQ
Trigger: CTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTTTGGATCTCTCTCCTaGACCAGAGGGAAGTGCCTT +
Preference number: 3 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPFGSLS*TRGKCL
Trigger: AAGGCACTTCCCTCTGGTCAAGGAGAGAGATCCAAA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTTTGGATCTCTCTCCTaGACCAGAGGGAAGTGCCTT +
Preference number: 3 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSFGSLS*TRGKCL
Trigger: AAGGCACTTCCCTCTGGTCAAGGAGAGAGATCCAAA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGTTCACCTCAAAAGATTaGTGTGTGTGTGTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLFTSKD*CVCVSK
Trigger: CTTTGACACACACACACACAAATCTTTTGAGGTGAA...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGTGATGTTCCCCAACTaGGATGGGGCAGTAGAAAGA +
Preference number: 3 (lower is better)
Translates to: ERLGINGDQIVPLERTLMVMFPN*DGAVER
Trigger: TCTTTCTACTGCCCCATCCAAGTTGGGGAACATCAC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCTCTTCCCCAAGCACTaGAGAAAGCACTGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSLFPKH*RKHWKE
Trigger: CTCTTTCCAGTGCTTTCTCAAGTGCTTGGGGAAGAG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTTCAGAGCCTGCAATTaGCCCTACCGTGAGCATAGT +
Preference number: 3 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPFRACN*PYREHS
Trigger: ACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCTCCAAGTATTTAGGTaGCTGGCCTGGCTTGTAGAG +
Preference number: 3 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPLQVFR*LAWLVE
Trigger: CTCTACAAGCCAGGCCAGCAACCTAAATACTTGGAG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAATTATCTCTAGAAGGTaGCTTCTGATAGCTTGGACA +
Preference number: 3 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRIISRR*LLIAWT
Trigger: TGTCCAAGCTATCAGAAGCAACCTTCTAGAGATAAT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAAAAGAGACGAGGGTTaGTCTGAGGGTGACCAGAGA +
Preference number: 3 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPKRDEG*SEGDQR
Trigger: TCTCTGGTCACCCTCAGACAAACCCTCGTCTCTTTT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp TCAAATTTCATACATGTCCCTCCTCGAAAGGAGCCATaGACCTCTGTAGCAACTCTGGAGACCTATTTCTGC +
Preference number: 3 (lower is better)
Translates to: SNFIHVPPRKEP*TSVATLETYFC
Trigger: GCAGAAATAGGTCTCCAGAGTTGCTACAGAGGTTCATGGCTCCTTTCGAGGAGGGACATGTATGAAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp TTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTaGAATTTGCCCTACCGTGAGCATAGTTCAATCTGT +
Preference number: 3 (lower is better)
Translates to: FRCYLCSLCFRA*NLPYREHSSIC
Trigger: ACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAACACCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATAGCACAGACTTTATCTaGCTCATAGTGGCATGTGAC +
Preference number: 3 (lower is better)
Translates to: IPKDLTFHMTATMATIADSTDFI*LIVACD
Trigger: GTCACATGCCACTATGAGCAAGATAAAGTCTGTGCT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATTGAGTTCACCATCCTaGGTCATCACAGAAGGAGAG +
Preference number: 3 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVLSSPS*VITEGE
Trigger: CTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACATGTCAAGGGGGCATTaGGTGTCTTTTCTGGTTCTA +
Preference number: 3 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNMSRGH*VSFLVL
Trigger: TAGAACCAGAAAAGACACCAAATGCCCCCTTGACAT...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACCACTAGAAAGGACATaGATGTCAAGGGGGCATTTG +
Preference number: 3 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVPLERT*MSRGHL
Trigger: CAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp AATCTTATAATTCTCATGGACATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCCTCCATAATGACGTGC +
Preference number: 3 (lower is better)
Translates to: NLIILMDIARYR*WLLLWASIMTC
Trigger: GCACGTCATTATGGAGGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAATGTCCATGAGAATTATAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp AGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTaGTCTGTTCAAATTTCATACATGTCCCTCCTCGAA +
Preference number: 3 (lower is better)
Translates to: RSSPMVEDKHLS*SVQISYMSLLE
Trigger: TTCGAGGAGGGACATGTATGAAATTTGAACAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCTTCTGAAGCAAAACTaGAGTGAGAGGCAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNLLKQN*SERQEQ
Trigger: TTGCTCCTGCCTCTCACTCAAGTTTTGCTTCAGAAG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp TACCTCCTGCACAGGGATGTGAAAAGTCAAGGAGAATaGTGCAAAAATACTCATGAACTATCCGGTGCTGAA +
Preference number: 3 (lower is better)
Translates to: YLLHRDVKSQGE*CKNTHELSGAE
Trigger: TTCAGCACCGGATAGTTCATGAGTATTTTTGCATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp CTGAGGGTGACCAGAGATAACTGGCCCAAAGTGATGTaGTTCAGATATGAGGGCTCTTCTAAAAAGGAATTT +
Preference number: 3 (lower is better)
Translates to: LRVTRDNWPKVM*FRYEGSSKKEF
Trigger: AAATTCCTTTTTAGAAGAGCCCTCATATCTGAATCACATCACTTTGGGCCAGTTATCTCTGGTCACCCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp GAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTaGCTTCTATTTAGCTTATCCACTAGCACATTCATG +
Preference number: 3 (lower is better)
Translates to: EHSSICTADGFG*LLFSLSTSTFM
Trigger: CATGAATGTGCTAGTGGATAAGCTAAATAGAAGGCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGTCAAAGGGAATGGTTaGTGCAGAGAGCTTTTCAAA +
Preference number: 3 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVVKGNG*CRELFK
Trigger: TTTGAAAAGCTCTCTGCACAAACCATTCCCTTTGAC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp CTCATGCTTAACGTGGGTAAGTTGCTTAGAAGAAAATaGAAAGCCTCATATGGTCATAACTGTGCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: LMLNVGKLLRRK*KASYGHNCAAF
Trigger: AAAGGCAGCACAGTTATGACCATATGAGGCTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAGCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR GCA 72 bp ATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTTaGTTAGAAGAAAATGCAAAGCCTCATATGGTCATA +
Preference number: 3 (lower is better)
Translates to: IALSPSCLTWVS*LEENAKPHMVI
Trigger: TATGACCATATGAGGCTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACTTAACGTGGGTAAGTaGCTTAGAAGAAAATGCAAA +
Preference number: 3 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVLNVGK*LRRKCK
Trigger: TTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACTTATCCAGACAACCTaGGGTAAGTCACTCAACTCT +
Preference number: 3 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLLIQTT*GKSLNS
Trigger: AGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAAG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR TCA 72 bp AGATATAAAAGTGCCCAGAGGAGTGCCTGGACCTTATaGGGAACTTTGTCAGCTCTAGTTGAATTTGAATTT +
Preference number: 3 (lower is better)
Translates to: RYKSAQRSAWTL*GTLSALVEFEF
Trigger: AAATTCAAATTCAACTAGAGCTGACAAAGTTCCTCATAAGGTCCAGGCACTCCTCTGGGCACTTTTATATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATTCACCTCAAAAGATTaGTGTGTGTGTGTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLFTSKD*CVCVSK
Trigger: CTTTGACACACACACACACAAATCTTTTGAGGTGAA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACCCGGGCCAGGGAAGCTaGGCCCAAGTGTCACCCATC +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHPGQGS*AQVSPI
Trigger: GATGGGTGACACTTGGGCCCAGCTTCCCTGGCCCGG...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACAGCTGCATGAGGCCCTaGAAGGCCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHSCMRP*KAWGCT
Trigger: GGTGCATCCCCAGGCCTTTCAGGGCCTCATGCAGCT...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACCCAGGCCCCCATAACTaGGGTCCAGGTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHPGPHN*GPGLGA
Trigger: AGCTCCGAGACCTGGACCTCAGTTATGGGGGCCTGG...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGTGCCGGCATCCGAGTaGATCAACCCGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHVPASE*INPAAK
Trigger: CTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCAC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAGGGAGGGCGTCTGGTaGCCAGCAGCTGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRREGVW*PAAVAV
Trigger: GACCGCCACAGCTGCTGGCCACCAGACGCCCTCCCT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGCTCTCCTCAGTGAGTaGGAAGAGCGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRALLSE*EERGAL
Trigger: GAGGGCGCCCCGCTCTTCTCACTCACTGAGGAGAGC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGATCAGCAGCATTGCTaGGTGGGGTGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQDQQHC*VGWPGP
Trigger: TGGCCCGGGCCACCCCACCCAGCAATGCTGCTGATC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACTCTGCTGTACAGCGCTaGATCCGGTTTCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHSAVQR*IRFRSH
Trigger: GTGGCTGCGAAACCGGATCCAGCGCTGTACAGCAGA...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGGTGGCCAGCAGCTGTaGCGGTCAGCAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRGGQQL*RSAAWR
Trigger: CCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGTAGCCAGGCGGCACTaGTGTGATGCGGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQVARRH*CDAVVG
Trigger: GCCCACAACCGCATCACAGCAGTGCCGCCTGGCTAC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLRCQDS*CPSCWA
Trigger: GGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCATTGCTGGGTGGGGTaGCCCGGGCCAGGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCHCWVG*PGPGKL
Trigger: CAGCTTCCCTGGCCCGGGCCACCCCACCCAGCAATG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLPGSCW*KEARGC
Trigger: ACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCCCTGGTAGCTGCTGGTaGAAGGAGGCCAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLPGSCW*KEARGC
Trigger: ACAGCCCCTGGCCTCCTTCCACCAGCAGCTACCAGG...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGGTGCTGCCAGGCTGTaGGTCTGTGGCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCGAARL*VCGPQC
Trigger: GCACTGTGGGCCACAGACCCACAGCCTGGCAGCACC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGGTTGTGGGCCAGGCTaGGGTTTCGGGTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRGCGPG*GFGCPL
Trigger: CAATGGACACCCGAAACCTCAGCCTGGCCCACAACC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGGCATTGCTGAGAGCTaGCAGTTTTGGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHGIAES*QFWCQE
Trigger: CTCCTGACACCAAAACTGTCAGCTCTCAGCAATGCC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGGAGATCAGCAGCATTaGTGGGTGGGGTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPGDQQH*WVGWPG
Trigger: CCCGGGCCACCCCACCCAGCAATGCTGCTGATCTCC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCGTGCCGGCATCCGAGTaGATCAACCCGGCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTVPASE*INPAAK
Trigger: CTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCAC...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGGACGGGGCAGCTGGTaGCGGCATCCGAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCGRGSW*RHPSAS
Trigger: TGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGTCTCACCTGGTAGCTaGTGGTGGAAGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQVSPGS*WWKEAR
Trigger: CCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGAC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGACCATCCTCAGCCTGCTaGCTGGGACCTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRPSSAC*LGPHQL
Trigger: CAGTTGGTGAGGTCCCAGGCAGCAGGCTGAGGATGG...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCTGCCAGGACTCTTGCTaGCCCAGTTGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCCQDSC*PSCWAS
Trigger: GGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCA...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAGTGTGCCAAGCGCTTaGCATGGAGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRSVPSA*HGGRGP
Trigger: GGGGCCTCTTCCTCCATGCCAAGCGCTTGGCACACT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGTGGCTCAGGTCGATGTaGACTAGCCCATGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQWLRSM*TSPWAS
Trigger: GGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCA...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGACGCAGCCAGGGGTTGTaGCTCAGGTCGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRRSQGL*LRSMWT
Trigger: AGTCCACATCGACCTGAGCCACAACCCCTGGCTGCG...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGGTGCTGCCAGGCTGTaGGTCTGTGGCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPGAARL*VCGPQC
Trigger: GCACTGTGGGCCACAGACCCACAGCCTGGCAGCACC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGCTGGAGGGAGCCCATaGGGACTGTGTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQAGGSP*GLCPWN
Trigger: ATTCCATGGACACAGTCCTCATGGGCTCCCTCCAGC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACAGGCGGCACTGCTGTaGTGCGGTTGTGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVQAALL*CGCGPG
Trigger: GCCTGGCCCACAACCGCATCACAGCAGTGCCGCCTG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCGCTCCATGTAGCATGTaGGGTAGCCAGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTAPCSM*GSQAAL
Trigger: CAGTGCCGCCTGGCTACCTCACATGCTACATGGAGC...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCGGCACTCAGCCAGCTaGGAATCTGCTGTACAGCGC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCRHSAS*ESAVQR
Trigger: GCGCTGTACAGCAGATTCTCAGCTGGCTGAGTGCCG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACAGCCCACGAACGCAATaGATAGGTAATCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHSPRTQ*IGNHPG
Trigger: CCCTGGATGATTACCTATTCATTGCGTTCGTGGGCT...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCTGTCCCCACCTTGCTTaGACCATGACTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLCPHLA*TMTEAA
Trigger: GGCTGCCTCAGTCATGGTTCAAGCAAGGTGGGGACA...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGTCTTCCCCCATGGTTaGAGACAAACACCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHVFPHG*RQTPVL
Trigger: CAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGAC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATCACCAGAGGGCTTCCTaGGATCCACGGGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADHQRAS*DPREVP
Trigger: GGGGACCTCCCGTGGATCTCAGGAAGCCCTCTGGTG...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR GCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGGAGATCAGCAGCATTaGTGGGTGGGGTGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADGDQQH*WVGWPG
Trigger: CCCGGGCCACCCCACCCAGCAATGCTGCTGATCTCC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAGGACGGGGCAGCTGGTaGCGGCATCCGAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLGRGSW*RHPSAS
Trigger: TGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCC...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCGCTCAGGTCCAAGTGTaGCAAGCGCTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLAQVQV*QALGME
Trigger: CTCCATGCCAAGCGCTTGGCACACTTGGACCTGAGC...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGGGATTGCCACCGATCTaGAGGGTCACCAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKGLPPI*RVTSPG
Trigger: ACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCC...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCACACACCCAGGGATTaGCACCGATCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLHTPRD*HRSAGS
Trigger: TGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTGCCAGGACTCTTGCTaGCCCAGTTGCTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKCQDSC*PSCWAS
Trigger: GGAGGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCA...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGTTTAGCTCTGGGTGCTaGCAGGCTGTGGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQFSSGC*QAVGLW
Trigger: CCACAGACCCACAGCCTGGCAGCACCCAGAGCTAAA...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAAAAGGACGGGGCAGCTaGTGCCGGCATCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAKGRGS*CRHPSA
Trigger: TGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCCAAGCGCTTGGCATaGAGGAAGAGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMAKRLA*RKRPRG
Trigger: GCCCCGGGGCCTCTTCCTCCATGCCAAGCGCTTGGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATCTGCTGTACAGCGCTaGATCCGGTTTCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRSAVQR*IRFRSH
Trigger: GTGGCTGCGAAACCGGATCCAGCGCTGTACAGCAGA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGGTGGCCAGCAGCTGTaGCGGTCAGCAGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADGGQQL*RSAAWR
Trigger: CCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAGGGAGGGCGTCTGGTaGCCAGCAGCTGTGGCGGTC +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPREGVW*PAAVAV
Trigger: GACCGCCACAGCTGCTGGCCACCAGACGCCCTCCCT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCCCTGGTGAGACCCTGTaGCATGAGCACTGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLPGETL*HEHCGK
Trigger: CTTGCCACAGTGCTCATGCCACAGGGTCTCACCAGG...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGCTGGAGGGAGCCCATaGGGACTGTGTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCAGGSP*GLCPWN
Trigger: ATTCCATGGACACAGTCCTCATGGGCTCCCTCCAGC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGCTCCATGTAGCATGTaGGGTAGCCAGGCGGCACTG +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCAPCSM*GSQAAL
Trigger: CAGTGCCGCCTGGCTACCTCACATGCTACATGGAGC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAACCATGGAACCAGAGTaGGCAGTCAGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVATMEPE*AVREGV
Trigger: GACGCCCTCCCTGACTGCTCACTCTGGTTCCATGGT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCACTACCCAGCCTTCTaGGGCATTCTCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLHYPAF*GILFPK
Trigger: CTTGGGGAAGAGAATGCCTCAGAAGGCTGGGTAGTG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACTTTGGACAATTTGAATaGAGCCTGTGGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHFGQFE*SLWSPG
Trigger: CCCTGGTGACCACAGGCTTCATTCAAATTGTCCAAA...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGTGCATCAACCCGGCTaGCAAGAGGAGGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCVHQPG*QEEGDQ
Trigger: CTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCAC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGCCTGGTTACGGCATGTaGAAAGGACGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKPGYGM*KGRGSW
Trigger: CCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGG...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGCAGGGGTTCCATGGTaGAGCCACACACCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCAGVPW*SHTPRD
Trigger: ATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGCAGGGGTTCCATGGTaGAGCCACACACCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAAGVPW*SHTPRD
Trigger: ATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACCTCTTCACTGGCCTTaGTCCAGCGGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAPLHWP*SSGGSS
Trigger: ACTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATAGGTGCCAGGACTCTTaGTGCCCCAGTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADRCQDS*CPSCWA
Trigger: GGCCCAGCAACTGGGGCAGCAAGAGTCCTGGCACCT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGATCAGCAGCATTGCTaGGTGGGGTGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVDQQHC*VGWPGP
Trigger: TGGCCCGGGCCACCCCACCCAGCAATGCTGCTGATC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAAAAGGACGGGGCAGCTaGTGCCGGCATCCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLKGRGS*CRHPSA
Trigger: TGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTT...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCGTTTCGGGTGTCCATTaGCAGGTCTGGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCVSGVH*QVWGHG
Trigger: TCCGTGCCCCCAGACCTGCCAATGGACACCCGAAAC...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACCTGGAACATGTCGGCTaGCACATGGCTGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHLEHVG*HMAEIV
Trigger: AACAATTTCAGCCATGTGCCAGCCGACATGTTCCAG...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCAGCCCATGGGCCTCCTaGAACATGTCGGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCSPWAS*NMSAGT
Trigger: TGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCT...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAAGCCCATGGGCCTCCTaGAACATGTCGGCTGGCACA +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVASPWAS*NMSAGT
Trigger: TGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACGCAGCCAGGGGTTGTaGCTCAGGTCGATGTGGACT +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVARSQGL*LRSMWT
Trigger: AGTCCACATCGACCTGAGCCACAACCCCTGGCTGCG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTGGCGGTCAGCAGCATaGAGGGATGAGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKWRSAA*RDERQA
Trigger: TGCCTGCCTCTCATCCCTCCATGCTGCTGACCGCCA...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCACTCCCTGTAGGCAGTaGCTGGCATTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLTPCRQ*LALLRA
Trigger: AGCTCTCAGCAATGCCAGCCACTGCCTACAGGGAGT...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACCAGGCCCCCATAACTaGGGTCCAGGTCTCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVPGPHN*GPGLGA
Trigger: AGCTCCGAGACCTGGACCTCAGTTATGGGGGCCTGG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATGCTCTCCTCAGTGAGTaGGAAGAGCGGGGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNALLSE*EERGAL
Trigger: GAGGGCGCCCCGCTCTTCTCACTCACTGAGGAGAGC...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAACCATGGAACCAGAGTaGGCAGTCAGGGAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLTMEPE*AVREGV
Trigger: GACGCCCTCCCTGACTGCTCACTCTGGTTCCATGGT...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCTGCTTGAACCATGACTaGGGCAGCCAGGTCACCATG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCCLNHD*GSQVTM
Trigger: CATGGTGACCTGGCTGCCTCAGTCATGGTTCAAGCA...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTGTCCCCACCTTGCTTaGACCATGACTGAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKCPHLA*TMTEAA
Trigger: GGCTGCCTCAGTCATGGTTCAAGCAAGGTGGGGACA...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGAGTGGCTGGCATTGCTaGGAGCTGACAGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLSGWHC*ELTVLV
Trigger: CACCAAAACTGTCAGCTCTCAGCAATGCCAGCCACT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCACACGCAGCAGGGCTTaGGCAGGAGTGGTTAACACA +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCTRSRA*AGVVNT
Trigger: TGTGTTAACCACTCCTGCTCAAGCCCTGCTGCGTGT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGATGGGGACAAGTCTCTaGGGCGCAGGAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKMGTSL*GAGESR
Trigger: TCTGCTCTCTCCTGCGCCTCAGAGACTTGTCCCCAT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATTTCCCAGGAGCCTCTaGGCACCAGAGGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLFPRSL*APEGFL
Trigger: CAGGAAGCCCTCTGGTGCTCAGAGGCTCCTGGGAAA...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGTGCATCAACCCGGCTaGCAAGAGGAGGGAGATCAG +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAVHQPG*QEEGDQ
Trigger: CTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCAC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGAGAATAGCCGCTGGCTaGTACAATCCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLRIAAG*YNPPPG
Trigger: ACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGTAGCCAGGCGGCACTaGTGTGATGCGGTTGTGGGC +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSVARRH*CDAVVG
Trigger: GCCCACAACCGCATCACAGCAGTGCCGCCTGGCTAC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGGATTGCCACCGATCTaGAGGGTCACCAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMGLPPI*RVTSPG
Trigger: ACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCCTTTTAGCTCTGGGTaGTGCCAGGCTGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCPFSSG*CQAVGL
Trigger: CAGACCCACAGCCTGGCAGCACCCAGAGCTAAAAGG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGAGGCAACAGCAGTGCTaGAGGGAGCCCATGAGGACT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKRQQQC*REPMRT
Trigger: AGTCCTCATGGGCTCCCTCCAGCACTGCTGTTGCCT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCAGGCAACAGCAGTGCTaGAGGGAGCCCATGAGGACT +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCRQQQC*REPMRT
Trigger: AGTCCTCATGGGCTCCCTCCAGCACTGCTGTTGCCT...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCACGGAGAATAGCCGCTaGCTGCTACAATCCACCACC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCTENSR*LLQSTT
Trigger: GGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGTTTCGGGTGTCCATTaGCAGGTCTGGGGGCACGGA +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADVSGVH*QVWGHG
Trigger: TCCGTGCCCCCAGACCTGCCAATGGACACCCGAAAC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCATGTGGACTAGCCCATaGGCCTCCTGGAACATGTCG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCMWTSP*ASWNMS
Trigger: CGACATGTTCCAGGAGGCCCATGGGCTAGTCCACAT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTGGCTCAGGTCGATGTaGACTAGCCCATGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADWLRSM*TSPWAS
Trigger: GGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATGCCCAGGAGGAAGTTaGTGGCCACAGAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKCPGGS*WPQKQW
Trigger: CCATTGCTTCTGTGGCCACCAACTTCCTCCTGGGCA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTATGGGGGCAGTCACTaGGAGGTGGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKYGGSH*EVVSPG
Trigger: ACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATA...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCAGGCTGTGGGTCTGTaGCCCACAGTGCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCQAVGL*PTVHFP
Trigger: AGGAAAGTGCACTGTGGGCCACAGACCCACAGCCTG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAAATACCGCTGGAGCTTaGGGCAAGGGAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKNTAGA*GKGGVE
Trigger: TTCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATT...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGGAAGCTTCTGCAATaGGGACAAGTCTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQRKLLQ*GQVSEA
Trigger: CGCCTCAGAGACTTGTCCCCATTGCAGAAGCTTCCT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAGGAAGCTTCTGCAATaGGGACAAGTCTCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRRKLLQ*GQVSEA
Trigger: CGCCTCAGAGACTTGTCCCCATTGCAGAAGCTTCCT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACCTTTTGCCTCTTCCTaGGGTGGGGAAGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAPFASS*GGEAQT
Trigger: TGTCTGCGCTTCCCCACCCCAGGAAGAGGCAAAAGG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCAAACTGAGAGCTCTGTaGATCCAGCTCTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTKLRAL*IQLSAQ
Trigger: CTGGGCGGAGAGCTGGATCCACAGAGCTCTCAGTTT...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp AATGCAAAGCCTCATATGGTCATAACTGTGCTGCCTTaGTCCCCTTTTAGCTCTGGGTGCTGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: NAKPHMVITVLP*SPFSSGCCQAV
Trigger: CACAGCCTGGCAGCACCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTATGACCATATGAGGCTTTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp GCCTGGCTTGTAGAGAACAACTTGAGTTCACCATCCTaGGTCATCACAGAAGGAGAGAGCAGGGCACAGTTC +
Preference number: 4 (lower is better)
Translates to: AWLVENNLSSPS*VITEGESRAQF
Trigger: GAACTGTGCCCTGCTCTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAAGTTGTTCTCTACAAGCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTGTGGGCCAGGCTaGGGTTTCGGGTGTCCATTG +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSGCGPG*GFGCPL
Trigger: CAATGGACACCCGAAACCTCAGCCTGGCCCACAACC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGACCTTGCTTGAACCATaGCTGAGGCAGCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKTLLEP*LRQPGH
Trigger: GTGACCTGGCTGCCTCAGTCATGGTTCAAGCAAGGT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCACTACCCAGCCTTCTaGGGCATTCTCTTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCHYPAF*GILFPK
Trigger: CTTGGGGAAGAGAATGCCTCAGAAGGCTGGGTAGTG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAACACGCAGCAGGGCTTaGGCAGGAGTGGTTAACACA +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVATRSRA*AGVVNT
Trigger: TGTGTTAACCACTCCTGCTCAAGCCCTGCTGCGTGT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTCAGGGAAGCACGAGTaGGGGATGCCTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADSGKHE*GMPSWK
Trigger: CTTCCAGGAAGGCATCCCTCACTCGTGCTTCCCTGA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTCAGGGAAGCACGAGTaGGGGATGCCTTCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNSGKHE*GMPSWK
Trigger: CTTCCAGGAAGGCATCCCTCACTCGTGCTTCCCTGA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCATAGCTTGGACAAGATaGTGGCGGTGGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCIAWTR*WRWGRS
Trigger: GCTTCTCCCCCACCGCCATCATCTTGTCCAAGCTAT...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCACTCAGCCTATGGCTaGGTGGACTATGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLHSAYG*VDYVRE
Trigger: TTCTCTGACATAGTCCACTCAGCCATAGGCTGAGTG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGGTCTTCCCCCATGGTTaGAGACAAACACCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLVFPHG*RQTPVL
Trigger: CAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGAC...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGCAAGACACCCAGTTaGGGTCCCCTAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSGKTPS*GPLGSG
Trigger: TCCAGACCCTAGGGGACCTCAACTGGGTGTCTTGCC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCCTCTTCACTGGCCTTaGTCCAGCGGTGGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMPLHWP*SSGGSS
Trigger: ACTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGTCTCACCTGGTAGCTaGTGGTGGAAGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSVSPGS*WWKEAR
Trigger: CCTGGCCTCCTTCCACCAGCAGCTACCAGGTGAGAC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACCATCCTCAGCCTGCTaGCTGGGACCTCACCAACTG +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVPSSAC*LGPHQL
Trigger: CAGTTGGTGAGGTCCCAGGCAGCAGGCTGAGGATGG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCCGGGCCAGGGAAGCTaGGCCCAAGTGTCACCCATC +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDPGQGS*AQVSPI
Trigger: GATGGGTGACACTTGGGCCCAGCTTCCCTGGCCCGG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAGCCAAGCGCTTGGCATaGAGGAAGAGGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLAKRLA*RKRPRG
Trigger: GCCCCGGGGCCTCTTCCTCCATGCCAAGCGCTTGGC...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTGCTGCCCCAGTTGCTaGGCCTCCTGCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSCCPSC*ASCLSL
Trigger: AAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATGCTGCCCCAGTTGCTaGGCCTCCTGCCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVCCPSC*ASCLSL
Trigger: AAGAGAGAGGCAGGAGGCCCAGCAACTGGGGCAGCA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATCCTGGTGAGACCCTGTaGCATGAGCACTGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADPGETL*HEHCGK
Trigger: CTTGCCACAGTGCTCATGCCACAGGGTCTCACCAGG...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGTGTGTCAAAGGGAATaGTTTGTGCAGAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHVCQRE*FVQRAF
Trigger: AAAAGCTCTCTGCACAAACCATTCCCTTTGACACAC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTTGCAGTTTCCCTGAATaGAGCTGCCTACCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPCSFPE*SCLPPS
Trigger: GGAAGGCGGTAGGCAGCTCCATTCAGGGAAACTGCA...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTGCAGTTTCCCTGAATaGAGCTGCCTACCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCCSFPE*SCLPPS
Trigger: GGAAGGCGGTAGGCAGCTCCATTCAGGGAAACTGCA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCTGATAGAATACCGCTaGAGCTTGGGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCLIEYR*SLGQGR
Trigger: CCTCCCTTGCCCCAAGCTCCAGCGGTATTCTATCAG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCTGCCTCTTCCTGGGGTaGGGAAGCGCAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTCLFLG*GSADNF
Trigger: AAAATTGTCTGCGCTTCCCCACCCCAGGAAGAGGCA...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGAAACTGAGAGCTCTGTaGATCCAGCTCTCCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKKLRAL*IQLSAQ
Trigger: CTGGGCGGAGAGCTGGATCCACAGAGCTCTCAGTTT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACAGCTGCATGAGGCCCTaGAAGGCCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSCMRP*KAWGCT
Trigger: GGTGCATCCCCAGGCCTTTCAGGGCCTCATGCAGCT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACACCTTGCTTGAACCATaGCTGAGGCAGCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNTLLEP*LRQPGH
Trigger: GTGACCTGGCTGCCTCAGTCATGGTTCAAGCAAGGT...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCTTGAGGGCAGGGACTaGGTCAGTTCATCTGATGTT +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTLEGRD*VSSSDV
Trigger: AACATCAGATGAACTGACTCAGTCCCTGCCCTCAAG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCAGAGGGAAGTGCCTTaGGGGCAGGGACTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNQREVP*GQGLSQ
Trigger: CTGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGACCTCACCAACTGGTaGCATTTGGTCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPDLTNW*HLVIWG
Trigger: CCCCCATATGACCAAATGTCACCAGTTGGTGAGGTC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGAAGACTCTTTTGGTTaGCTAGCTCAGGGAAGCACG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCEDSFG*LAQGST
Trigger: CGTGCTTCCCTGAGCTAGTCAACCAAAAGAGTCTTC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCCAGTTTGGACAATTTaGATGAAGCCTGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLPVWTI*MKPVVT
Trigger: GGTGACCACAGGCTTCATTCAAATTGTCCAAACTGG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAATGGGGACAAGTCTCTaGGGCGCAGGAGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVMGTSL*GAGESR
Trigger: TCTGCTCTCTCCTGCGCCTCAGAGACTTGTCCCCAT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGGCCCAAAGTGATGTaGTTCAGATATGAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRWPKVM*FRYEGS
Trigger: AGAGCCCTCATATCTGAATCACATCACTTTGGGCCA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTCCTCGAAAGGAGCCATaGACCTCTGTAGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPPRKEP*TSVATL
Trigger: CAGAGTTGCTACAGAGGTTCATGGCTCCTTTCGAGG...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACCTCGAAAGGAGCCATaGACCTCTGTAGCAACTCTG +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAPRKEP*TSVATL
Trigger: CAGAGTTGCTACAGAGGTTCATGGCTCCTTTCGAGG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCTCAGGTCCAAGTGTaGCAAGCGCTTGGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMAQVQV*QALGME
Trigger: CTCCATGCCAAGCGCTTGGCACACTTGGACCTGAGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGTCTGTGGCCCACAGTaGACTTTCCTGGTGAGACCC +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVVCGPQ*TFLVRP
Trigger: GGGTCTCACCAGGAAAGTGCACTGTGGGCCACAGAC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCCTTTTAGCTCTGGGTaGTGCCAGGCTGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPPFSSG*CQAVGL
Trigger: CAGACCCACAGCCTGGCAGCACCCAGAGCTAAAAGG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTCTGTTTCAGAGCCTaGAATTTGCCCTACCGTGAG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCLCFRA*NLPYRE
Trigger: CTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATACTTTTCACATGACTaGCACCATGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRYFSHD*HHGHHC
Trigger: GCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTACAATCCACCACCTaGTTACGGCATGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCLQSTT*LRHVQR
Trigger: CCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATATGTGGACTAGCCCATaGGCCTCCTGGAACATGTCG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADMWTSP*ASWNMS
Trigger: CGACATGTTCCAGGAGGCCCATGGGCTAGTCCACAT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTCTCTTCCTCTTCACTaGCCTTGCTCCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPSLPLH*PCSSGG
Trigger: GCCACCGCTGGAGCAAGGCCAGTGAAGAGGAAGAGA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCACACTATGCATATTCTaGCCTCTGCCATGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLTLCIF*PLPCAD
Trigger: GTCTGCACATGGCAGAGGCCAGAATATGCATAGTGT...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMAVTGR*SHLVAA
Trigger: AGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGCAGTCACTGGGAGGTaGTCTCACCTGGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSAVTGR*SHLVAA
Trigger: AGCAGCTACCAGGTGAGACCACCTCCCAGTGACTGC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATATGGGGGCAGTCACTaGGAGGTGGTCTCACCTGGT +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVYGGSH*EVVSPG
Trigger: ACCAGGTGAGACCACCTCCCAGTGACTGCCCCCATA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCGLEQE*LTQLPF
Trigger: GAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACTGATAGAATACCGCTaGAGCTTGGGGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLLIEYR*SLGQGR
Trigger: CCTCCCTTGCCCCAAGCTCCAGCGGTATTCTATCAG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCGGAGGTCTTCCCCCATaGTTGAAGACAAACACCTGT +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTGGLPP*LKTNTC
Trigger: ACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCC...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCGGCTGGCACATGGCTaGAATTGTTGTAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNRLAHG*NCCSSG
Trigger: ACCTGAGCTACAACAATTTCAGCCATGTGCCAGCCG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTGCTTGAACCATGACTaGGGCAGCCAGGTCACCATG +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPCLNHD*GSQVTM
Trigger: CATGGTGACCTGGCTGCCTCAGTCATGGTTCAAGCA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTGAGTCAGTTCATCTaGTGTTCCCAATTCCTAGCG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCLSQFI*CSQFLA
Trigger: CGCTAGGAATTGGGAACATCAGATGAACTGACTCAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCACGTGCTCAGAGTCCTaGCATATAGTCTTAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLTCSES*HIVLKG
Trigger: TCCCTTTAAGACTATATGTCAGGACTCTGAGCACGT...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTTTGGTGTCAGGAGGTaGGGGGTAGGTTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCFGVRR*GVGLSS
Trigger: AGAACTCAAACCTACCCCTCACCTCCTGACACCAAA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCAGTGCCTGGACCTTATaGGGAACTTTGTCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTSAWTL*GTLSAL
Trigger: TAGAGCTGACAAAGTTCCTCATAAGGTCCAGGCACT...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGGATTACTGATGTTTaGTTTACCTCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQRITDV*FTSCTG
Trigger: CCCTGTGCAGGAGGTAAATCAAACATCAGTAATCCT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCCTTCCTGGAAGATaGCTTATTAGCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRCLPGR*LISLLH
Trigger: ATGAAGGAGGCTAATAAGTCATCTTCCAGGAAGGCA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCCAGTTTGGACAATTTaGATGAAGCCTGTGGTCACC +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTPVWTI*MKPVVT
Trigger: GGTGACCACAGGCTTCATTCAAATTGTCCAAACTGG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGTTACAAAAGACCTTGTaGCGCCCTCACTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLLQKTL*RPHFPF
Trigger: AAAAGGGAAGTGAGGGCGTCACAAGGTCTTTTGTAA...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACAGCAGGCAACAGCAGTaGTGGAGGGAGCCCATGAGG +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSRQQQ*WREPMR
Trigger: CCTCATGGGCTCCCTCCAGCACTGCTGTTGCCTGCT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCCTGGTTACGGCATGTaGAAAGGACGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDPGYGM*KGRGSW
Trigger: CCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCTGGCCTCTGCCATGTaGAGACACCCTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPLASAM*RHPSLP
Trigger: AGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATAGTTGCTGGGCCTCCTaGCTCTCTCTTCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADSCWAS*LSLLKQ
Trigger: TTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACAGTTGCTGGGCCTCCTaGCTCTCTCTTCTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNSCWAS*LSLLKQ
Trigger: TTGCTTCAGAAGAGAGAGGCAGGAGGCCCAGCAACT...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCTCTCTGAGCCTTAGTTaGCTCATCCGTAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLSLSLS*LIRKMG
Trigger: TCCCATTTTACGGATGAGGCAACTAAGGCTCAGAGA...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGCAGATGGGTTTGGCTaGCTTCTATTTAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQADGFG*LLFSLS
Trigger: GGATAAGCTAAATAGAAGGCAGCCAAACCCATCTGC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCTACTTTTCACATGACTaGCACCATGGCCACCATTGC +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTYFSHD*HHGHHC
Trigger: GCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTA...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCTCTTAGTATCTCTTaGAACACACGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSLSIS*NTRSRA
Trigger: AGCCCTGCTGCGTGTGTTGCAAGAGATACTAAGAGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTCAGCTCTCCGCCCAGTaGTGTGACAAACACAATAGT +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPQLSAQ*CDKHNS
Trigger: ACTATTGTGTTTGTCACAGCACTGGGCGGAGAGCTG...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCACGGAGAATAGCCGCTaGCTGCTACAATCCACCACC +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPTENSR*LLQSTT
Trigger: GGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACAGTGTGCCAAGCGCTTaGCATGGAGGAAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSVPSA*HGGRGP
Trigger: GGGGCCTCTTCCTCCATGCCAAGCGCTTGGCACACT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTGGAACATGTCGGCTaGCACATGGCTGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCLEHVG*HMAEIV
Trigger: AACAATTTCAGCCATGTGCCAGCCGACATGTTCCAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCCCAACTGGTGACATTTaGTCATATGGGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCPTGDI*SYGGSH
Trigger: GTGACTGCCCCCATATGACCAAATGTCACCAGTTGG...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAGGCTTTCCAGGAGGATaGGCTGATAGAATACCGCTG +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLGFPGG*ADRIPL
Trigger: CAGCGGTATTCTATCAGCCCATCCTCCTGGAAAGCC...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACGGCTTTCCAGGAGGATaGGCTGATAGAATACCGCTG +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNGFPGG*ADRIPL
Trigger: CAGCGGTATTCTATCAGCCCATCCTCCTGGAAAGCC...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTCCTCTGGCCTAGCATaGAGGAAGCTTCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNSSGLA*RKLLQW
Trigger: CCATTGCAGAAGCTTCCTCCATGCTAGGCCAGAGGA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAACGTATAGGGGAAAATaGAAGCTGGAGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVATYRGK*KLEVFP
Trigger: GGGGAAGACCTCCAGCTTCCATTTTCCCCTATACGT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTACGTATAGGGGAAAATaGAAGCTGGAGGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPTYRGK*KLEVFP
Trigger: GGGGAAGACCTCCAGCTTCCATTTTCCCCTATACGT...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCTCTCCATACAAAGGTTaGCATCTTCCCTCTAACCCC +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCSPYKG*HLPSNP
Trigger: GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGA...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCAGGTCCCCTAGGGTCTaGAATGATGATCAAAACCTG +
Preference number: 4 (lower is better)
Translates to: NLPYREHSSICTADGFGCRSPRV*NDDQNL
Trigger: CAGGTTTTGATCATCATTCCAGACCCTAGGGGACCT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCGGCTGGCACATGGCTaGAATTGTTGTAGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMRLAHG*NCCSSG
Trigger: ACCTGAGCTACAACAATTTCAGCCATGTGCCAGCCG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACGGCACTCAGCCAGCTaGGAATCTGCTGTACAGCGC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLRHSAS*ESAVQR
Trigger: GCGCTGTACAGCAGATTCTCAGCTGGCTGAGTGCCG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGATGCTCATACAAAATaGGTGTCCCCACCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPDAHTK*VSPPCL
Trigger: CAAGCAAGGTGGGGACACTCATTTTGTATGAGCATC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVIARYR*WLLLWA
Trigger: GGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAAT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCAGTGGCTGGCATTGCTaGGAGCTGACAGTTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPSGWHC*ELTVLV
Trigger: CACCAAAACTGTCAGCTCTCAGCAATGCCAGCCACT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTAGTGCCTGGACCTTATaGGGAACTTTGTCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPSAWTL*GTLSAL
Trigger: TAGAGCTGACAAAGTTCCTCATAAGGTCCAGGCACT...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCACATTCATGGATGCTaGATTCCAGGGCCCCACTAC +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMHIHGC*IPGPHY
Trigger: GTAGTGGGGCCCTGGAATTCAGCATCCATGAATGTG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACACATTCATGGATGCTaGATTCCAGGGCCCCACTAC +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVHIHGC*IPGPHY
Trigger: GTAGTGGGGCCCTGGAATTCAGCATCCATGAATGTG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATATAGCTTGGACAAGATaGTGGCGGTGGGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNIAWTR*WRWGRS
Trigger: GCTTCTCCCCCACCGCCATCATCTTGTCCAAGCTAT...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGGAATCGAGAGTCTGTaGCACAGGAAGGCAGCTACA +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMGIESL*HRKAAT
Trigger: TGTAGCTGCCTTCCTGTGTCACAGACTCTCGATTCC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR GCA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCATTAAGGAGTTGTTGTaGAAATCCAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTIKELL*KSSTWS
Trigger: GCTCCAGGTGCTGGATTTGCACAACAACTCCTTAAT...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCTGGCCTCTGCCATGTaGAGACACCCTTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNLASAM*RHPSLP
Trigger: AGGCAAAGAAGGGTGTCTGCACATGGCAGAGGCCAG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGTCTGTGGCCCACAGTaGACTTTCCTGGTGAGACCC +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDVCGPQ*TFLVRP
Trigger: GGGTCTCACCAGGAAAGTGCACTGTGGGCCACAGAC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCSEPAI*PTVSIV
Trigger: AACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACAGCATGTTGGACTGTaGCTTGATGTTCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKQHVGL*LDVLLL
Trigger: TAGGAGAAGAACATCAAGGCACAGTCCAACATGCTG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCTCATTAGGATGCCTCTaGCACAGATTTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLSLGCL*HRFFSF
Trigger: GAAGGAGAAAAATCTGTGGCAGAGGCATCCTAATGA...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATCATTAGGATGCCTCTaGCACAGATTTTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRSLGCL*HRFFSF
Trigger: GAAGGAGAAAAATCTGTGGCAGAGGCATCCTAATGA...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACCACTAGCACATTCATaGATGCTGAATTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLPLAHS*MLNSRA
Trigger: GGCCCTGGAATTCAGCATCCATGAATGTGCTAGTGG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCAATCTGTACAGCAGATaGGTTTGGCTGCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLNLYSR*VWLPSI
Trigger: AATAGAAGGCAGCCAAACCCATCTGCTGTACAGATT...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGGGCTTGAGCAGGAGTaGTTAACACAGCTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADGLEQE*LTQLPF
Trigger: GAAAGGAAGCTGTGTTAACCACTCCTGCTCAAGCCC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATAATACCGCTGGAGCTTaGGGCAAGGGAGGTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNNTAGA*GKGGVE
Trigger: TTCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATT...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAGGAGGTCTTCCCCCATaGTTGAAGACAAACACCTGT +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLGGLPP*LKTNTC
Trigger: ACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCC...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTGCCTCTTCCTGGGGTaGGGAAGCGCAGACAATTTT +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSCLFLG*GSADNF
Trigger: AAAATTGTCTGCGCTTCCCCACCCCAGGAAGAGGCA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCCTTTTGCCTCTTCCTaGGGTGGGGAAGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDPFASS*GGEAQT
Trigger: TGTCTGCGCTTCCCCACCCCAGGAAGAGGCAAAAGG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCACGTGCTCAGAGTCCTaGCATATAGTCTTAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCTCSES*HIVLKG
Trigger: TCCCTTTAAGACTATATGTCAGGACTCTGAGCACGT...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATATTGCTAGATACAGATaGTGGCTCCTCCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNIARYR*WLLLWA
Trigger: GGCCCAGAGGAGGAGCCATCATCTGTATCTAGCAAT...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCGCAAGAACAGTCACATaGTTAGGATCCCAAGGTGCC +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPARTVT*LGSQGA
Trigger: GGCACCTTGGGATCCTAATCATGTGACTGTTCTTGC...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGCAGGCAGTGTTGCTGTaGGAATTGAAAGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKQAVLL*ELKEVS
Trigger: ACTCACTTCTTTCAATTCTCACAGCAACACTGCCTG...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCACTCAGCCTATGGCTaGGTGGACTATGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSHSAYG*VDYVRE
Trigger: TTCTCTGACATAGTCCACTCAGCCATAGGCTGAGTG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAATAACTGGCCCAAAGTaGTGTGATTCAGATATGAGG +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKITGPK*CDSDMR
Trigger: CCTCATATCTGAATCACATCACTTTGGGCCAGTTAT...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAATTAAGGAGTTGTTGTaGAAATCCAGCACCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAIKELL*KSSTWS
Trigger: GCTCCAGGTGCTGGATTTGCACAACAACTCCTTAAT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACACACACCCAGGGATTaGCACCGATCTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLHTPRD*HRSAGS
Trigger: TGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGGCAGACACCCTTCTTTaGCTACCTGACAAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKADTLL*LPDKVD
Trigger: ATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGC...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCTCTCTCACCCTCATaGTTAACGTGGGTAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMALSPS*LTWVSC
Trigger: GCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTCTCTTAGTATCTCTTaGAACACACGCAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADSLSIS*NTRSRA
Trigger: AGCCCTGCTGCGTGTGTTGCAAGAGATACTAAGAGA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAAGCAGGGCACAGTTCTaGTTCGGATGTCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLSRAQF*FGCHRA
Trigger: GGCCCTGTGACATCCGAAGCAGAACTGTGCCCTGCT...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCAGCTCTCCGCCCAGTaGTGTGACAAACACAATAGT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMQLSAQ*CDKHNS
Trigger: ACTATTGTGTTTGTCACAGCACTGGGCGGAGAGCTG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCTACAATCCACCACCTaGTTACGGCATGTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPLQSTT*LRHVQR
Trigger: CCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATCTCTTCCTCTTCACTaGCCTTGCTCCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLSLPLH*PCSSGG
Trigger: GCCACCGCTGGAGCAAGGCCAGTGAAGAGGAAGAGA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACCCTCATGCTTAACGTaGGTAAGTTGCTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKPSCLT*VSCLEE
Trigger: TTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAAGTGTGTCAAAGGGAATaGTTTGTGCAGAGAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKVCQRE*FVQRAF
Trigger: AAAAGCTCTCTGCACAAACCATTCCCTTTGACACAC...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATTATCCAGACAACCTTaGGTAAGTCACTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKLSRQP*VSHSTL
Trigger: GAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACACTTGAGAAAGCACTaGAAAGAGAACTGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SSASDVTGPGICPRCCKKHLRKH*KENCVR
Trigger: CCTAACACAGTTCTCTTTCCAGTGCTTTCTCAAGTG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCCCACTAGCACATTCATaGATGCTGAATTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPPLAHS*MLNSRA
Trigger: GGCCCTGGAATTCAGCATCCATGAATGTGCTAGTGG...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp CCTACCGCCTTCCTTCTAGGGCTTATCCAGACAACCTaGGGTAAGTCACTCAACTCTCTACGATTAATTCAT +
Preference number: 4 (lower is better)
Translates to: PTAFLLGLIQTT*GKSLNSLRLIH
Trigger: ATGAATTAATCGTAGAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAAGCCCTAGAAGGAAGGCGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp TGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGCAATTaGCCCTACCGTGAGCATAGTTCAATCTGTACAGCA +
Preference number: 4 (lower is better)
Translates to: CYLCSLCFRACN*PYREHSSICTA
Trigger: TGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAGACTACACAGGTAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGATGCTCATACAAAATaGGTGTCCCCACCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSDAHTK*VSPPCL
Trigger: CAAGCAAGGTGGGGACACTCATTTTGTATGAGCATC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCTGAGTCAGTTCATCTaGTGTTCCCAATTCCTAGCG +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSLSQFI*CSQFLA
Trigger: CGCTAGGAATTGGGAACATCAGATGAACTGACTCAG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCTTGAGGGCAGGGACTaGGTCAGTTCATCTGATGTT +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNLEGRD*VSSSDV
Trigger: AACATCAGATGAACTGACTCAGTCCCTGCCCTCAAG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCGCTTTTCAAAGTACCTaGCACTGGCAAGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPAFQST*HWQGLS
Trigger: ACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGC...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCTTTTCAAAGTACCTaGCACTGGCAAGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMAFQST*HWQGLS
Trigger: ACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTCCTGCACAGGGATGTaGAAAGTCAAGGAGAATGAT +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADSCTGM*KVKEND
Trigger: ATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAAGGATTACTGATGTTTaGTTTACCTCCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLRITDV*FTSCTG
Trigger: CCCTGTGCAGGAGGTAAATCAAACATCAGTAATCCT...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGTAAAACAGGATTACTaGTGTTTGATTTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQVKQDY*CLIYLL
Trigger: CAGGAGGTAAATCAAACATCAGTAATCCTGTTTTAC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACATGGCCACCATTGCTaGTGTTTTATCTACACATTG +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAHGHHC*CFIYTL
Trigger: CAATGTGTAGATAAAACATCAGCAATGGTGGCCATG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATGAAGACTCTTTTGGTTaGCTAGCTCAGGGAAGCACG +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNEDSFG*LAQGST
Trigger: CGTGCTTCCCTGAGCTAGTCAACCAAAAGAGTCTTC...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGATAACTGGCCCAAAGTaGTGTGATTCAGATATGAGG +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKITGPK*CDSDMR
Trigger: CCTCATATCTGAATCACATCACTTTGGGCCAGTTAT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTTACAAAAGACCTTGTaGCGCCCTCACTTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADLQKTL*RPHFPF
Trigger: AAAAGGGAAGTGAGGGCGTCACAAGGTCTTTTGTAA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACAGAATAGCCGCTGGCTaGTACAATCCACCACCTGGT +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDRIAAG*YNPPPG
Trigger: ACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGAAAGGGAATGGTTTGTaGAGAGAGCTTTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLKGNGL*RELFKV
Trigger: TACTTTGAAAAGCTCTCTGCACAAACCATTCCCTTT...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCCAGGAGGAAGTTGGTaGCCACAGAAGCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDPGGSW*PQKQWR
Trigger: TCTCCATTGCTTCTGTGGCCACCAACTTCCTCCTGG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATGCCCAGGAGGAAGTTaGTGGCCACAGAAGCAATGG +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLCPGGS*WPQKQW
Trigger: CCATTGCTTCTGTGGCCACCAACTTCCTCCTGGGCA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTACACTATGCATATTCTaGCCTCTGCCATGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSTLCIF*PLPCAD
Trigger: GTCTGCACATGGCAGAGGCCAGAATATGCATAGTGT...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGCCCTCATGCTTAACGTaGGTAAGTTGCTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKPSCLT*VSCLEE
Trigger: TTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGG...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATGCTTAGTCTTCTACTGCTaGAAAGGATGTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RTLMSRGHLVSFLVLVLCLVFYC*KGCQHR
Trigger: TCTGTGCTGACATCCTTTCCAGCAGTAGAAGACTAA...GCATAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTATCTCCATACAAAGGTTaGCATCTTCCCTCTAACCCC +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVSPYKG*HLPSNP
Trigger: GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGA...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTG +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLPSLPT*QSRYFL
Trigger: CAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTACTCTATACAAGTAAGTaGCCAGGAACTGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLLYTSK*PGTVHS
Trigger: AGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAG...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAGACCTCACCAACTGGTaGCATTTGGTCATATGGGGG +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLDLTNW*HLVIWG
Trigger: CCCCCATATGACCAAATGTCACCAGTTGGTGAGGTC...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTCAGGCAGTGTTGCTGTaGGAATTGAAAGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSQAVLL*ELKEVS
Trigger: ACTCACTTCTTTCAATTCTCACAGCAACACTGCCTG...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCATGGCCACCATTGCTaGTGTTTTATCTACACATTG +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNHGHHC*CFIYTL
Trigger: CAATGTGTAGATAAAACATCAGCAATGGTGGCCATG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGTGCCTTCCTGGAAGATaGCTTATTAGCCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMCLPGR*LISLLH
Trigger: ATGAAGGAGGCTAATAAGTCATCTTCCAGGAAGGCA...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGCAGACACCCTTCTTTaGCTACCTGACAAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSADTLL*LPDKVD
Trigger: ATCTACTTTGTCAGGTAGGCAAAGAAGGGTGTCTGC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGCAGATGGGTTTGGCTaGCTTCTATTTAGCTTATCC +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMADGFG*LLFSLS
Trigger: GGATAAGCTAAATAGAAGGCAGCCAAACCCATCTGC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCTCTGTTTCAGAGCCTaGAATTTGCCCTACCGTGAG +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLCFRA*NLPYRE
Trigger: CTCACGGTAGGGCAAATTGCAGGCTCTGAAACAGAG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTACAGCATGTTGGACTGTaGCTTGATGTTCTTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVQHVGL*LDVLLL
Trigger: TAGGAGAAGAACATCAAGGCACAGTCCAACATGCTG...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTTATCCAGACAACCTTaGGTAAGTCACTCAACTCTC +
Preference number: 4 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNLSRQP*VSHSTL
Trigger: GAGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp AAAAGATTTGTGTGTGTGTGTGTCAAAGGGAATGGTTaGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGC +
Preference number: 4 (lower is better)
Translates to: KRFVCVCVKGNG*CRELFKVPDTG
Trigger: GCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAAACCATTCCCTTTGACACACACACACACAAATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp CGTAAAATGGGAACAACAGCGTTCACCTCAAAAGATTaGTGTGTGTGTGTGTCAAAGGGAATGGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RKMGTTAFTSKD*CVCVSKGMVCA
Trigger: TGCACAAACCATTCCCTTTGACACACACACACACAAATCTTTTGAGGTGAACGCTGTTGTTCCCATTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAAGCCCACGAACGCAATaGATAGGTAATCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLSPRTQ*IGNHPG
Trigger: CCCTGGATGATTACCTATTCATTGCGTTCGTGGGCT...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCTCTATACAAGTAAGTaGCCAGGAACTGTTCACTCT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMLYTSK*PGTVHS
Trigger: AGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATTTGGTGTCAGGAGGTaGGGGGTAGGTTTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLFGVRR*GVGLSS
Trigger: AGAACTCAAACCTACCCCTCACCTCCTGACACCAAA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATTCCTGCACAGGGATGTaGAAAGTCAAGGAGAATGAT +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNSCTGM*KVKEND
Trigger: ATCATTCTCCTTGACTTTTCACATCCCTGTGCAGGA...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTTTGGACAATTTGAATaGAGCCTGTGGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDFGQFE*SLWSPG
Trigger: CCCTGGTGACCACAGGCTTCATTCAAATTGTCCAAA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTACTATGTCAGAGAACTaGACCCAAGTTCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSTMSEN*TQVLER
Trigger: TCTCTCTAGAACTTGGGTTCAGTTCTCTGACATAGT...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCACTATGTCAGAGAACTaGACCCAAGTTCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPTMSEN*TQVLER
Trigger: TCTCTCTAGAACTTGGGTTCAGTTCTCTGACATAGT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTCAGAGCCTGCAATTTaGCCTACCGTGAGCATAGTT +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSEPAI*PTVSIV
Trigger: AACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGATACTTTCCTCATTGTaGTCTAGTAAACTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKILSSL*SSKLRN
Trigger: GTTCCTCAGTTTACTAGAGCACAATGAGGAAAGTAT...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGGCACCAACCTATATATaGCTATTTAGGCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKAPTYI*LFRHAY
Trigger: ATAAGCATGCCTAAATAGGCATATATAGGTTGGTGC...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATAAAGGGAATAGTTTTTaGATCTCTCTCCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADKGNSF*ISLLDQ
Trigger: CTGGTCAAGGAGAGAGATCCAAAAACTATTCCCTTT...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACCAACTGGTGACATTTaGTCATATGGGGGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLPTGDI*SYGGSH
Trigger: GTGACTGCCCCCATATGACCAAATGTCACCAGTTGG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGAATCTGTACAGCAGATaGGTTTGGCTGCCTTCTATT +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMNLYSR*VWLPSI
Trigger: AATAGAAGGCAGCCAAACCCATCTGCTGTACAGATT...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp AATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTaGCTTAGAAGAAAATGCAAAGCCTCATATGGTCAT +
Preference number: 4 (lower is better)
Translates to: NSSLTLMLNVGK*LRRKCKASYGH
Trigger: ATGACCATATGAGGCTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
3UTR CAA 72 bp ATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATaGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTT +
Preference number: 4 (lower is better)
Translates to: INGDQIVPLERT*MSRGHLVSFLV
Trigger: AACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCCTTCTTTGCCTACCTaGCAAAGTAGATATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNPSLPT*QSRYFL
Trigger: CAGGAAATATCTACTTTGTCAGGTAGGCAAAGAAGG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGACAAACACCTGTCTTaGTCTGTTCAAATTTCATAC +
Preference number: 4 (lower is better)
Translates to: IPKDLTFHMTATMATIADDKHLS*SVQISY
Trigger: GTATGAAATTTGAACAGATCAAGACAGGTGTTTGTC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTCTCTGAGCCTTAGTTaGCTCATCCGTAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDSLSLS*LIRKMG
Trigger: TCCCATTTTACGGATGAGGCAACTAAGGCTCAGAGA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCATATAGTATTATGGTATaGCCCTATGGGAAACTTTTC +
Preference number: 4 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAYSIMV*PYGKLF
Trigger: GAAAAGTTTCCCATAGGGGCATACCATAATACTATA...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTTTTTAGTCTTCTACTaGTGGAAAGGATGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSFLVFY*WKGCQH
Trigger: GTGCTGACATCCTTTCCAGCAGTAGAAGACTAAAAA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTAAAGGGAATAGTTTTTaGATCTCTCTCCTTGACCAG +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSKGNSF*ISLLDQ
Trigger: CTGGTCAAGGAGAGAGATCCAAAAACTATTCCCTTT...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCACTTGAGAAAGCACTaGAAAGAGAACTGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNHLRKH*KENCVR
Trigger: CCTAACACAGTTCTCTTTCCAGTGCTTTCTCAAGTG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGGTAAAACAGGATTACTaGTGTTTGATTTACCTCCTG +
Preference number: 4 (lower is better)
Translates to: ERLGINGDQIVPLERTLMVKQDY*CLIYLL
Trigger: CAGGAGGTAAATCAAACATCAGTAATCCTGTTTTAC...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR TCA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGACAAACACCTGTCTTaGTCTGTTCAAATTTCATAC +
Preference number: 4 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSDKHLS*SVQISY
Trigger: GTATGAAATTTGAACAGATCAAGACAGGTGTTTGTC...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTTAGTCTTCTACTGCTaGAAAGGATGTCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLVFYC*KGCQHR
Trigger: TCTGTGCTGACATCCTTTCCAGCAGTAGAAGACTAA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATAAAGGGAATGGTTTGTaGAGAGAGCTTTTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNKGNGL*RELFKV
Trigger: TACTTTGAAAAGCTCTCTGCACAAACCATTCCCTTT...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGCACCAACCTATATATaGCTATTTAGGCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDAPTYI*LFRHAY
Trigger: ATAAGCATGCCTAAATAGGCATATATAGGTTGGTGC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATTTTTAGTCTTCTACTaGTGGAAAGGATGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLFLVFY*WKGCQH
Trigger: GTGCTGACATCCTTTCCAGCAGTAGAAGACTAAAAA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTTAACGTGGGTAAGTTaGTTAGAAGAAAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLTWVS*LEENAK
Trigger: CTTTGCATTTTCTTCTAAGCAACTTACCCACGTTAA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR GCA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTAATACTTTCCTCATTGTaGTCTAGTAAACTGAGGAAC +
Preference number: 4 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLILSSL*SSKLRN
Trigger: GTTCCTCAGTTTACTAGAGCACAATGAGGAAAGTAT...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 90 bp CAGGGTCAGGGTCAGGTGGCAGGCCTTGAAGCTCTCCTCAGTGAGTaGGAAGAGCGGGGCGCCCTCGACTTCAGGAGGGCCCCGGCACTC +
Preference number: 5 (lower is better)
Translates to: QGQGQVAGLEALLSE*EERGALDFRRAPAL
Trigger: GAGTGCCGGGGCCCTCCTGAAGTCGAGGGCGCCCCGCTCTTCTCACTCACTGAGGAGAGCTTCAAGGCCTGCCACCTGACCCTGACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp AAGGACGGGGCAGCTGGTGCCGGCATCCGAGTGCATCAACCCGGCTaGCAAGAGGAGGGAGATCAGCAGCATTGCTGGGTGGGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: KDGAAGAGIRVHQPG*QEEGDQQHCWVGWP
Trigger: GGGCCACCCCACCCAGCAATGCTGCTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp CCCGGCTGCCAAGAGGAGGGAGATCAGCAGCATTGCTGGGTGGGGTaGCCCGGGCCAGGGAAGCTGGGCCCAAGTGTCACCCATCTTAGG +
Preference number: 5 (lower is better)
Translates to: PGCQEEGDQQHCWVG*PGPGKLGPSVTHLR
Trigger: CCTAAGATGGGTGACACTTGGGCCCAGCTTCCCTGGCCCGGGCCACCCCACCCAGCAATGCTGCTGATCTCCCTCCTCTTGGCAGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp AGGGGTTCCATGGTGCAGCCACACACCCAGGGATTGCCACCGATCTaGAGGGTCACCAGCCCCGGTAGGCCCTCAAGAGCCTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: RGSMVQPHTQGLPPI*RVTSPGRPSRASRL
Trigger: CAGCCTGGAGGCTCTTGAGGGCCTACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCATGGAACCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp GCCACTTCAGCAGGGGTTCCATGGTGCAGCCACACACCCAGGGATTaGCACCGATCTGCAGGGTCACCAGCCCCGGTAGGCCCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: ATSAGVPWCSHTPRD*HRSAGSPAPVGPQE
Trigger: CTCTTGAGGGCCTACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGCTGAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp GAGATCAGCAGCATTGCTGGGTGGGGTGGCCCGGGCCAGGGAAGCTaGGCCCAAGTGTCACCCATCTTAGGCAGCAGGCAACAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: EISSIAGWGGPGQGS*AQVSPILGSRQQQC
Trigger: GCACTGCTGTTGCCTGCTGCCTAAGATGGGTGACACTTGGGCCCAGCTTCCCTGGCCCGGGCCACCCCACCCAGCAATGCTGCTGATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp TGGGGATGCACCCTCCGCAGCCAGGGGTTGTGGCTCAGGTCGATGTaGACTAGCCCATGGGCCTCCTGGAACATGTCGGCTGGCACATGG +
Preference number: 5 (lower is better)
Translates to: WGCTLRSQGLWLRSM*TSPWASWNMSAGTW
Trigger: CCATGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCACAACCCCTGGCTGCGGAGGGTGCATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 90 bp TGGCTAGGGACTTTCCCAGGAGCCTCTGAGCACCAGAGGGCTTCCTaGGATCCACGGGAGGTCCCCTTCCGGAGCCTAGGGGGCAAGACA +
Preference number: 5 (lower is better)
Translates to: WLGTFPGASEHQRAS*DPREVPFRSLGGKT
Trigger: TGTCTTGCCCCCTAGGCTCCGGAAGGGGACCTCCCGTGGATCTCAGGAAGCCCTCTGGTGCTCAGAGGCTCCTGGGAAAGTCCCTAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS CCA 90 bp TCTGGGGGCACGGAGAATAGCCGCTGGCTGCTACAATCCACCACCTaGTTACGGCATGTGCAAAGGACGGGGCAGCTGGTGCCGGCATCC +
Preference number: 5 (lower is better)
Translates to: SGGTENSRWLLQSTT*LRHVQRTGQLVPAS
Trigger: GGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGTGCCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp AATCCACCACCTGGTTACGGCATGTGCAAAGGACGGGGCAGCTGGTaGCGGCATCCGAGTGCATCAACCCGGCTGCCAAGAGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: NPPPGYGMCKGRGSW*RHPSASTRLPRGGR
Trigger: TCTCCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp GGGTGTCCATTGGCAGGTCTGGGGGCACGGAGAATAGCCGCTGGCTaGTACAATCCACCACCTGGTTACGGCATGTGCAAAGGACGGGGC +
Preference number: 5 (lower is better)
Translates to: GCPLAGLGARRIAAG*YNPPPGYGMCKGRG
Trigger: GCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGTGCCCCCAGACCTGCCAATGGACACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp TACAATCCACCACCTGGTTACGGCATGTGCAAAGGACGGGGCAGCTaGTGCCGGCATCCGAGTGCATCAACCCGGCTGCCAAGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YNPPPGYGMCKGRGS*CRHPSASTRLPRGG
Trigger: CCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp TTACGGCATGTGCAAAGGACGGGGCAGCTGGTGCCGGCATCCGAGTaGATCAACCCGGCTGCCAAGAGGAGGGAGATCAGCAGCATTGCT +
Preference number: 5 (lower is better)
Translates to: LRHVQRTGQLVPASE*INPAAKRREISSIA
Trigger: AGCAATGCTGCTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp CAGCACCTGGAGCTCCATGTAGCATGTGAGGTAGCCAGGCGGCACTaGTGTGATGCGGTTGTGGGCCAGGCTGAGGTTTCGGGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: QHLELHVACEVARRH*CDAVVGQAEVSGVH
Trigger: ATGGACACCCGAAACCTCAGCCTGGCCCACAACCGCATCACAGCAGTGCCGCCTGGCTACCTCACATGCTACATGGAGCTCCAGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp TACAGCGCTGGATCCGGTTTCGCAGCCACTTCAGCAGGGGTTCCATaGTGCAGCCACACACCCAGGGATTGCCACCGATCTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: YSAGSGFAATSAGVP*CSHTPRDCHRSAGS
Trigger: TGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGCTGAAGTGGCTGCGAAACCGGATCCAGCGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp TCAGGGAGGGCGTCTGGTGGCCAGCAGCTGTGGCGGTCAGCAGCATaGAGGGATGAGAGGCAGGCATGTCAGATCTCTTCCTCTTCACTG +
Preference number: 5 (lower is better)
Translates to: SGRASGGQQLWRSAA*RDERQACQISSSSL
Trigger: CAGTGAAGAGGAAGAGATCTGACATGCCTGCCTCTCATCCCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACCAGACGCCCTCCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGGGAGATCAGCAGCATaGCTGGGTGGGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHGRSAA*LGGVAR
Trigger: CCGGGCCACCCCACCCAGCAATGCTGCTGATCTCCC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp AGAATAGCCGCTGGCTGCTACAATCCACCACCTGGTTACGGCATGTaGAAAGGACGGGGCAGCTGGTGCCGGCATCCGAGTGCATCAACC +
Preference number: 5 (lower is better)
Translates to: RIAAGCYNPPPGYGM*KGRGSWCRHPSAST
Trigger: GGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp GTCGGCTGGCACATGGCTGAAATTGTTGTAGCTCAGGTCCAAGTGTaGCAAGCGCTTGGCATGGAGGAAGAGGCCCCGGGGCAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: VGWHMAEIVVAQVQV*QALGMEEEAPGQLH
Trigger: ATGGAGCTGCCCCGGGGCCTCTTCCTCCATGCCAAGCGCTTGGCACACTTGGACCTGAGCTACAACAATTTCAGCCATGTGCCAGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp CTCCGCAGCCAGGGGTTGTGGCTCAGGTCGATGTGGACTAGCCCATaGGCCTCCTGGAACATGTCGGCTGGCACATGGCTGAAATTGTTG +
Preference number: 5 (lower is better)
Translates to: LRSQGLWLRSMWTSP*ASWNMSAGTWLKLL
Trigger: CAACAATTTCAGCCATGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCACAACCCCTGGCTGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACGGTTTCGGGTGTCCATaGGCAGGTCTGGGGGCACGG +
Preference number: 5 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHGFGCP*AGLGAR
Trigger: CCGTGCCCCCAGACCTGCCAATGGACACCCGAAACC...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 90 bp AGCTGGGCCCAAGTGTCACCCATCTTAGGCAGCAGGCAACAGCAGTaGTGGAGGGAGCCCATGAGGACTGTGTCCATGGAATCGAGAGTC +
Preference number: 5 (lower is better)
Translates to: SWAQVSPILGSRQQQ*WREPMRTVSMESRV
Trigger: GACTCTCGATTCCATGGACACAGTCCTCATGGGCTCCCTCCAGCACTGCTGTTGCCTGCTGCCTAAGATGGGTGACACTTGGGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp TTTCGGGTGTCCATTGGCAGGTCTGGGGGCACGGAGAATAGCCGCTaGCTGCTACAATCCACCACCTGGTTACGGCATGTGCAAAGGACG +
Preference number: 5 (lower is better)
Translates to: FRVSIGRSGGTENSR*LLQSTTWLRHVQRT
Trigger: CGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGTGCCCCCAGACCTGCCAATGGACACCCGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 90 bp CAGGCATGTCAGATCTCTTCCTCTTCACTGGCCTTGCTCCAGCGGTaGCAGCAGTTGGCAGTGATGCCCAGGAGGAAGTTGGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: QACQISSSSLALLQR*QQLAVMPRRKLVAT
Trigger: TGTGGCCACCAACTTCCTCCTGGGCATCACTGCCAACTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGGAAGAGATCTGACATGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 90 bp CTGGAGGGAGCCCATGAGGACTGTGTCCATGGAATCGAGAGTCTGTaGCACAGGAAGGCAGCTACATCTGGGGCCAGCGTCTGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: LEGAHEDCVHGIESL*HRKAATSGASVCEG
Trigger: ACCTTCACAGACGCTGGCCCCAGATGTAGCTGCCTTCCTGTGTCACAGACTCTCGATTCCATGGACACAGTCCTCATGGGCTCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR CAA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCGGGAGATCAGCAGCATaGCTGGGTGGGGTGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLGRSAA*LGGVAR
Trigger: CCGGGCCACCCCACCCAGCAATGCTGCTGATCTCCC...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 90 bp GGACTAGCCCATGGGCCTCCTGGAACATGTCGGCTGGCACATGGCTaGAATTGTTGTAGCTCAGGTCCAAGTGTGCCAAGCGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: GLAHGPPGTCRLAHG*NCCSSGPSVPSAWH
Trigger: ATGCCAAGCGCTTGGCACACTTGGACCTGAGCTACAACAATTTCAGCCATGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGCTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATGTGG +
Preference number: 5 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQLRSQG*WLRSMW
Trigger: CCACATCGACCTGAGCCACAACCCCTGGCTGCGGAG...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCAGCGGTGGCAGCAGTaGGCAGTGATGCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTQRWQQ*AVMPRR
Trigger: CCTCCTGGGCATCACTGCCAACTGCTGCCACCGCTG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAATCCTCTTCACTGGCCTaGCTCCAGCGGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSASDVTGPGICPRCCKKSSSLA*LQRWQQ
Trigger: CTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGGA...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGAATACCGCTGGAGCTaGGGGCAAGGGAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYREYRWS*GQGRCG
Trigger: TCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATTC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCGCCCTCACTTCCCTTTaGCCTCTTCCTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: NLPYREHSSICTADGFGCALTSL*PLPGVG
Trigger: CCCCACCCCAGGAAGAGGCAAAAGGGAAGTGAGGGC...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATGGTTTCGGGTGTCCATaGGCAGGTCTGGGGGCACGG +
Preference number: 5 (lower is better)
Translates to: IPKDLTFHMTATMATIADGFGCP*AGLGAR
Trigger: CCGTGCCCCCAGACCTGCCAATGGACACCCGAAACC...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATCTCCGCAGCCAGGGGTaGTGGCTCAGGTCGATGTGG +
Preference number: 5 (lower is better)
Translates to: IPKDLTFHMTATMATIADLRSQG*WLRSMW
Trigger: CCACATCGACCTGAGCCACAACCCCTGGCTGCGGAG...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGGTCAGGTGGCAGGCCTaGAAGCTCTCCTCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQVRWQA*KLSSVS
Trigger: ACTCACTGAGGAGAGCTTCAAGGCCTGCCACCTGAC...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCCAGAGGGAAGTGCCTaGAGGGCAGGGACTGAGTCA +
Preference number: 5 (lower is better)
Translates to: NLPYREHSSICTADGFGCPEGSA*RAGTES
Trigger: TGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTGG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACTTCAGAGCCTGCAATTaGCCCTACCGTGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHFRACN*PYREHS
Trigger: ACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAA...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGGGCAAGACACCCAGTaGAGGTCCCCTAGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAGQDTQ*RSPRVW
Trigger: CCAGACCCTAGGGGACCTCAACTGGGTGTCTTGCCC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS-3UTR CAA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACAGCTCCATTAAGGAGTaGTTGTGCAAATCCAGCACC +
Preference number: 5 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHSSIKE*LCKSST
Trigger: GGTGCTGGATTTGCACAACAACTCCTTAATGGAGCT...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTCCAGAGGGAAGTGCCTaGAGGGCAGGGACTGAGTCA +
Preference number: 5 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPPEGSA*RAGTES
Trigger: TGACTCAGTCCCTGCCCTCAAGGCACTTCCCTCTGG...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAGAATACCGCTGGAGCTaGGGGCAAGGGAGGTGTGGA +
Preference number: 5 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAEYRWS*GQGRCG
Trigger: TCCACACCTCCCTTGCCCCAAGCTCCAGCGGTATTC...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCCACACACCCAGGGATaGCCACCGATCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ERLGINGDQIVPLERTLMPHTQG*PPICRV
Trigger: GACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCTCCTCTTCACTGGCCTaGCTCCAGCGGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPSSSLA*LQRWQQ
Trigger: CTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGGA...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CACCAACTGGTGACATTTGGTCATATGGGGGCAGTCACTGGGAGGTGGTCTCACACCAGTTTGGACAATTaGAATGAAGCCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: HQLVTFGHMGAVTGRWSHTSLDN*NEACGH
Trigger: GTGACCACAGGCTTCATTCAAATTGTCCAAACTGGT...GTGAGACCACCTCCCAGTGACTGCCCCCATATGACCAAATGTCACCAGTTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCAGCGGTGGCAGCAGTaGGCAGTGATGCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDQRWQQ*AVMPRR
Trigger: CCTCCTGGGCATCACTGCCAACTGCTGCCACCGCTG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CTGTGCCACACCCCCTCTATACAAGTAAGTGACCAGGAACTGTTCACTCTTCTCTTTGGATCTCTCTCCTaGACCAGAGGGAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LCHTPSIQVSDQELFTLLFGSLS*TRGKCL
Trigger: AAGGCACTTCCCTCTGGTCAAGGAGAGAGATCCAAA...GAGAAGAGTGAACAGTTCCTGGTCACTTACTTGTATAGAGGGGGTGTGGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGATAACTGTGCTGCCTTaGTCCCCTTTTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: SQRTANIQGTSQTDIQMQITVLP*SPFSSG
Trigger: CCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTAT...CTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAGTGATGTTCCCCAACTaGGATGGGGCAGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRVMFPN*DGAVER
Trigger: TCTTTCTACTGCCCCATCCAAGTTGGGGAACATCAC...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAAAAAGAGACGAGGGTTaGTCTGAGGGTGACCAGAGA +
Preference number: 5 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRKRDEG*SEGDQR
Trigger: TCTCTGGTCACCCTCAGACAAACCCTCGTCTCTTTT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATGCCCTCACTTCCCTTTaGCCTCTTCCTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNALTSL*PLPGVG
Trigger: CCCCACCCCAGGAAGAGGCAAAAGGGAAGTGAGGGC...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAGTCAGGTGGCAGGCCTaGAAGCTCTCCTCAGTGAGT +
Preference number: 5 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVVRWQA*KLSSVS
Trigger: ACTCACTGAGGAGAGCTTCAAGGCCTGCCACCTGAC...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AGTTCTGCTTCGGATGTCACAGGGCCAGGGATTTGTCCCAGATGTTGTAAGAAACTCTTCCCCAAGCACTaGAGAAAGCACTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SSASDVTGPGICPRCCKKLFPKH*RKHWKE
Trigger: CTCTTTCCAGTGCTTTCTCAAGTGCTTGGGGAAGAG...TTTCTTACAACATCTGGGACAAATCCCTGGCCCTGTGACATCCGAAGCAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTCCAAGTATTTAGGTaGCTGGCCTGGCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: NLPYREHSSICTADGFGCLQVFR*LAWLVE
Trigger: CTCTACAAGCCAGGCCAGCAACCTAAATACTTGGAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACCACACACCCAGGGATaGCCACCGATCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLPHTQG*PPICRV
Trigger: GACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCCTTCTGAAGCAAAACTaGAGTGAGAGGCAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: NLPYREHSSICTADGFGCLLKQN*SERQEQ
Trigger: TTGCTCCTGCCTCTCACTCAAGTTTTGCTTCAGAAG...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGCTTATCCAGACAACCTaGGGTAAGTCACTCAACTCT +
Preference number: 5 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLLIQTT*GKSLNS
Trigger: AGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAAG...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTCTCTTCCCCAAGCACTaGAGAAAGCACTGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPLFPKH*RKHWKE
Trigger: CTCTTTCCAGTGCTTTCTCAAGTGCTTGGGGAAGAG...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGATGCAGAGATACCCCACCATGGCCACCATaGCTGATGTTTTATCTACAC +
Preference number: 5 (lower is better)
Translates to: GQPIYKEPRRQTYRCRDTPPWPP*LMFYLH
Trigger: GTGTAGATAAAACATCAGCAATGGTGGCCATGGTGG...GGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCCAAGTCAGCGGACAGCCAATATACAAGGAACCTCGCAGACAGACATACAGAATGTCAAGGGGGCATTaGGTGTCTTTTCTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: SQVSGQPIYKEPRRQTYRMSRGH*VSFLVL
Trigger: TAGAACCAGAAAAGACACCAAATGCCCCCTTGACAT...TCTGTATGTCTGTCTGCGAGGTTCCTTGTATATTGGCTGTCCGCTGACTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGGTTGCTTCTGATAGCTaGGACAAGATGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKVASDS*DKMMAV
Trigger: CACCGCCATCATCTTGTCCAAGCTATCAGAAGCAAC...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTGGTCTTCCCCCATGGTaGAAGACAAACACCTGTCTT +
Preference number: 5 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPGLPPW*KTNTCL
Trigger: AAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACC...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCAAGCTCCATTAAGGAGTaGTTGTGCAAATCCAGCACC +
Preference number: 5 (lower is better)
Translates to: QLGWGSRKSTDFILLIVASSIKE*LCKSST
Trigger: GGTGCTGGATTTGCACAACAACTCCTTAATGGAGCT...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp ATGGAAGCTGGAGGTCTTCCCCCATGGTTGAAGACAAACACCTGTCTTGATCTGGTCAAAGGGAATGGTTaGTGCAGAGAGCTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: MEAGGLPPWLKTNTCLDLVKGNG*CRELFK
Trigger: TTTGAAAAGCTCTCTGCACAAACCATTCCCTTTGAC...CAGATCAAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACCTCCAGCTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAGTGATGTTCCCCAACTaGGATGGGGCAGTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLVMFPN*DGAVER
Trigger: TCTTTCTACTGCCCCATCCAAGTTGGGGAACATCAC...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTATTCAGAGCCTGCAATTaGCCCTACCGTGAGCATAGT +
Preference number: 5 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLFRACN*PYREHS
Trigger: ACTATGCTCACGGTAGGGCAAATTGCAGGCTCTGAA...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTCCACCATGGCCACCATaGCTGATGTTTTATCTACAC +
Preference number: 5 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPPPWPP*LMFYLH
Trigger: GTGTAGATAAAACATCAGCAATGGTGGCCATGGTGG...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGCCACTAGAAAGGACATaGATGTCAAGGGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKPLERT*MSRGHL
Trigger: CAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGG...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp CAACTTGGATGGGGCAGTAGAAAGAGCACAGACTTTATCTTGCTCATAGTGGCACCACTAGAAAGGACATaGATGTCAAGGGGGCATTTG +
Preference number: 5 (lower is better)
Translates to: QLGWGSRKSTDFILLIVAPLERT*MSRGHL
Trigger: CAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGG...TGCCACTATGAGCAAGATAAAGTCTGTGCTCTTTCTACTGCCCCATCCAAGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACGAAGCAGGGAATTCCTaGGCAGTAGGGAGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNEAGNS*AVGRLN
Trigger: ATTCAACCTCCCTACTGCCAAGGAATTCCCTGCTTC...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTGGTTCTAGTCCTAAAAAGAGACGAGGGTTaGTCTGAGGGTGACCAGAGA +
Preference number: 5 (lower is better)
Translates to: ERTLMSRGHLVSFLVLVLKRDEG*SEGDQR
Trigger: TCTCTGGTCACCCTCAGACAAACCCTCGTCTCTTTT...TAGGACTAGAACCAGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACGGTCTTCCCCCATGGTaGAAGACAAACACCTGTCTT +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNGLPPW*KTNTCL
Trigger: AAGACAGGTGTTTGTCTTCAACCATGGGGGAAGACC...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp ATTCCCAAAGATCTTACTTTTCACATGACTGCCACCATGGCCACCATTGCTGATTCCATTAAGGAGTTGTaGTGCAAATCCAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: IPKDLTFHMTATMATIADSIKEL*CKSSTW
Trigger: CCAGGTGCTGGATTTGCACAACAACTCCTTAATGGA...ATCAGCAATGGTGGCCATGGTGGCAGTCATGTGAAAAGTAAGATCTTTGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATAGGCAGTGGCTGGCATaGCTGAGAGCTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNRQWLA*LRADSF
Trigger: AAAACTGTCAGCTCTCAGCAATGCCAGCCACTGCCT...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGATAACTGTGCTGCCTTaGTCCCCTTTTAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ERLGINGDQIVPLERTLMITVLP*SPFSSG
Trigger: CCCAGAGCTAAAAGGGGACAAAGGCAGCACAGTTAT...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCTTGTAGAGAACAACTaGAGTTCACCATCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNLVENN*SSPSLV
Trigger: GACCAAGGATGGTGAACTCAAGTTGTTCTCTACAAG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TTGTGCAGAGAGCTTTTCAAAGTACCTGACACTGGCAAGGGCTTAGTATTTAATCTCCAAGTATTTAGGTaGCTGGCCTGGCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: LCRELFKVPDTGKGLVFNLQVFR*LAWLVE
Trigger: CTCTACAAGCCAGGCCAGCAACCTAAATACTTGGAG...ATTAAATACTAAGCCCTTGCCAGTGTCAGGTACTTTGAAAAGCTCTCTGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTTGGCAGTAGGGAGGTaGAATACTTTCCTCATTGTG +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNLAVGR*NTFLIV
Trigger: CACAATGAGGAAAGTATTCAACCTCCCTACTGCCAA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTTGCCCTACCGTGAGCATAGTTCAATCTGTACAGCAGATGGGTTTGGCTGCATTATCTCTAGAAGGTaGCTTCTGATAGCTTGGACA +
Preference number: 5 (lower is better)
Translates to: NLPYREHSSICTADGFGCIISRR*LLIAWT
Trigger: TGTCCAAGCTATCAGAAGCAACCTTCTAGAGATAAT...GCAGCCAAACCCATCTGCTGTACAGATTGAACTATGCTCACGGTAGGGCAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GGCAAGGGCTTAGTATTTAATAGCTCTCTCACCCTCATGCTTAACGTGGGTAAGTTCACCTCAAAAGATTaGTGTGTGTGTGTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: GKGLVFNSSLTLMLNVGKFTSKD*CVCVSK
Trigger: CTTTGACACACACACACACAAATCTTTTGAGGTGAA...CTTACCCACGTTAAGCATGAGGGTGAGAGAGCTATTAAATACTAAGCCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TCCAGTCCTACCCTAAACCTGGTGGGATTCCATCTTAATCTATCAAGCAATGTAAGCACAGACTTTATCTaGCTCATAGTGGCATGTGAC +
Preference number: 5 (lower is better)
Translates to: SSPTLNLVGFHLNLSSNVSTDFI*LIVACD
Trigger: GTCACATGCCACTATGAGCAAGATAAAGTCTGTGCT...TACATTGCTTGATAGATTAAGATGGAATCCCACCAGGTTTAGGGTAGGACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTAGCACAGACTTTATCTaGCTCATAGTGGCATGTGAC +
Preference number: 5 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSSTDFI*LIVACD
Trigger: GTCACATGCCACTATGAGCAAGATAAAGTCTGTGCT...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp TGCATGGTTATAAAATCATCTCCATACAAAGGTTGGCATCTTCCCTCTAACCCCATGTCAAGGGGGCATTaGGTGTCTTTTCTGGTTCTA +
Preference number: 5 (lower is better)
Translates to: CMVIKSSPYKGWHLPSNPMSRGH*VSFLVL
Trigger: TAGAACCAGAAAAGACACCAAATGCCCCCTTGACAT...GGGGTTAGAGGGAAGATGCCAACCTTTGTATGGAGATGATTTTATAACCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTTTGGCAGTAGGGAGGTaGAATACTTTCCTCATTGTG +
Preference number: 5 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSLAVGR*NTFLIV
Trigger: CACAATGAGGAAAGTATTCAACCTCCCTACTGCCAA...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGAAGCAGGGAATTCCTaGGCAGTAGGGAGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDEAGNS*AVGRLN
Trigger: ATTCAACCTCCCTACTGCCAAGGAATTCCCTGCTTC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGTTGCTTCTGATAGCTaGGACAAGATGATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDVASDS*DKMMAV
Trigger: CACCGCCATCATCTTGTCCAAGCTATCAGAAGCAAC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AATTGTCCCACTAGAAAGGACATTGATGTCAAGGGGGCATTTGGTGTCTTTTCTACCAGTTTGGACAATTaGAATGAAGCCTGTGGTCAC +
Preference number: 5 (lower is better)
Translates to: NCPTRKDIDVKGAFGVFSTSLDN*NEACGH
Trigger: GTGACCACAGGCTTCATTCAAATTGTCCAAACTGGT...AGAAAAGACACCAAATGCCCCCTTGACATCAATGTCCTTTCTAGTGGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTATTTGGATCTCTCTCCTaGACCAGAGGGAAGTGCCTT +
Preference number: 5 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLFGSLS*TRGKCL
Trigger: AAGGCACTTCCCTCTGGTCAAGGAGAGAGATCCAAA...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACTTGAGTTCACCATCCTaGGTCATCACAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLSSPS*VITEGE
Trigger: CTCTCCTTCTGTGATGACCAAGGATGGTGAACTCAA...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AAAGCAGGAGTCTCCTATTCAGGTGTTACCTGTGTAGTCTCTGTTTCAGAGCCTTTCTTGGCCCAAATCTaGACCAAACTAAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: KAGVSYSGVTCVVSVSEPFLAQI*TKLNFD
Trigger: ATCAAAGTTTAGTTTGGTCAAGATTTGGGCCAAGAA...AGGCTCTGAAACAGAGACTACACAGGTAACACCTGAATAGGAGACTCCTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACTTCTGAAGCAAAACTaGAGTGAGAGGCAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLLLKQN*SERQEQ
Trigger: TTGCTCCTGCCTCTCACTCAAGTTTTGCTTCAGAAG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACCTTAACGTGGGTAAGTaGCTTAGAAGAAAATGCAAA +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNLNVGK*LRRKCK
Trigger: TTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAG...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGTTCACCTCAAAAGATTaGTGTGTGTGTGTGTCAAAG +
Preference number: 5 (lower is better)
Translates to: ERLGINGDQIVPLERTLMFTSKD*CVCVSK
Trigger: CTTTGACACACACACACACAAATCTTTTGAGGTGAA...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACCTTATCCAGACAACCTaGGGTAAGTCACTCAACTCT +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDLIQTT*GKSLNS
Trigger: AGAGTTGAGTGACTTACCCAAGGTTGTCTGGATAAG...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp AACCTCGCAGACAGACATACAGATGCAGAGATACCCCATCACATACATGTTAACTTCTTGGCCCAAATCTaGACCAAACTAAACTTTGAT +
Preference number: 5 (lower is better)
Translates to: NLADRHTDAEIPHHIHVNFLAQI*TKLNFD
Trigger: ATCAAAGTTTAGTTTGGTCAAGATTTGGGCCAAGAA...GTTAACATGTATGTGATGGGGTATCTCTGCATCTGTATGTCTGTCTGCGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAAGGCTTGGCATTAATGGAGACCAAATTGTCCCACTAGAAAGGACATTGATGCTTAACGTGGGTAAGTaGCTTAGAAGAAAATGCAAA +
Preference number: 5 (lower is better)
Translates to: ERLGINGDQIVPLERTLMLNVGK*LRRKCK
Trigger: TTTGCATTTTCTTCTAAGCAACTTACCCACGTTAAG...CATCAATGTCCTTTCTAGTGGGACAATTTGGTCTCCATTAATGCCAAGCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACGTCAAAGGGAATGGTTaGTGCAGAGAGCTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDVKGNG*CRELFK
Trigger: TTTGAAAAGCTCTCTGCACAAACCATTCCCTTTGAC...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GAAACTGATGAAGAAGACCACGATGATGATAATTGTGCTTTGCTCGTAAAGTTACTTGTAGAGAACAACTaGAGTTCACCATCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: ETDEEDHDDDNCALLVKLLVENN*SSPSLV
Trigger: GACCAAGGATGGTGAACTCAAGTTGTTCTCTACAAG...TAACTTTACGAGCAAAGCACAATTATCATCATCGTGGTCTTCTTCATCAGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS-3UTR CAA 90 bp GATTCAGATATGAGGGCTCTTCTAAAAAGGAATTTTCTTGGCCCAAATCTTGACATTATCTCTAGAAGGTaGCTTCTGATAGCTTGGACA +
Preference number: 5 (lower is better)
Translates to: DSDMRALLKRNFLGPNLDIISRR*LLIAWT
Trigger: TGTCCAAGCTATCAGAAGCAACCTTCTAGAGATAAT...GTCAAGATTTGGGCCAAGAAAATTCCTTTTTAGAAGAGCCCTCATATCTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp AAGGCCTGGGGATGCACCCTCCGCAGCCAGGGGTTGTaGCTCAGGTCGATGTGGACTAGCCCATGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: KAWGCTLRSQGL*LRSMWTSPWAS
Trigger: GGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCACAACCCCTGGCTGCGGAGGGTGCATCCCCAGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 72 bp GGTCAGGTGGCAGGCCTTGAAGCTCTCCTCAGTGAGTaGGAAGAGCGGGGCGCCCTCGACTTCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GQVAGLEALLSE*EERGALDFRRA
Trigger: GGCCCTCCTGAAGTCGAGGGCGCCCCGCTCTTCTCACTCACTGAGGAGAGCTTCAAGGCCTGCCACCTGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp GTGCAAAGGACGGGGCAGCTGGTGCCGGCATCCGAGTaGATCAACCCGGCTGCCAAGAGGAGGGAGATCAGC +
Preference number: 6 (lower is better)
Translates to: VQRTGQLVPASE*INPAAKRREIS
Trigger: GCTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp ATGGTGCAGCCACACACCCAGGGATTGCCACCGATCTaGAGGGTCACCAGCCCCGGTAGGCCCTCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: MVQPHTQGLPPI*RVTSPGRPSRA
Trigger: GGCTCTTGAGGGCCTACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp CCACCTGGTTACGGCATGTGCAAAGGACGGGGCAGCTaGTGCCGGCATCCGAGTGCATCAACCCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: PPGYGMCKGRGS*CRHPSASTRLP
Trigger: TGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 72 bp ACTTTCCCAGGAGCCTCTGAGCACCAGAGGGCTTCCTaGGATCCACGGGAGGTCCCCTTCCGGAGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: TFPGASEHQRAS*DPREVPFRSLG
Trigger: CCCTAGGCTCCGGAAGGGGACCTCCCGTGGATCTCAGGAAGCCCTCTGGTGCTCAGAGGCTCCTGGGAAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS GCA 72 bp GCAGCTGGTGCCGGCATCCGAGTGCATCAACCCGGCTaGCAAGAGGAGGGAGATCAGCAGCATTGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: AAGAGIRVHQPG*QEEGDQQHCWV
Trigger: CACCCAGCAATGCTGCTGATCTCCCTCCTCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp CCTGGTTACGGCATGTGCAAAGGACGGGGCAGCTGGTaGCGGCATCCGAGTGCATCAACCCGGCTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: PGYGMCKGRGSW*RHPSASTRLPR
Trigger: TCTTGGCAGCCGGGTTGATGCACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp ACCCTCCGCAGCCAGGGGTTGTGGCTCAGGTCGATGTaGACTAGCCCATGGGCCTCCTGGAACATGTCGGCT +
Preference number: 6 (lower is better)
Translates to: TLRSQGLWLRSM*TSPWASWNMSA
Trigger: AGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCACAACCCCTGGCTGCGGAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CAA 90 bp AGCCACTTCAGCAGGGGTTCCATGGTGCAGCCACACACCCAGGGATaGCCACCGATCTGCAGGGTCACCAGCCCCGGTAGGCCCTCAAGA +
Preference number: 6 (lower is better)
Translates to: SHFSRGSMVQPHTQG*PPICRVTSPGRPSR
Trigger: TCTTGAGGGCCTACCGGGGCTGGTGACCCTGCAGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGCTGAAGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp GCTGGCTGCTACAATCCACCACCTGGTTACGGCATGTaGAAAGGACGGGGCAGCTGGTGCCGGCATCCGAGT +
Preference number: 6 (lower is better)
Translates to: AGCYNPPPGYGM*KGRGSWCRHPS
Trigger: ACTCGGATGCCGGCACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp CAGGGGTTGTGGCTCAGGTCGATGTGGACTAGCCCATaGGCCTCCTGGAACATGTCGGCTGGCACATGGCTG +
Preference number: 6 (lower is better)
Translates to: QGLWLRSMWTSP*ASWNMSAGTWL
Trigger: CAGCCATGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCACAACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp GCGTCTGGTGGCCAGCAGCTGTGGCGGTCAGCAGCATaGAGGGATGAGAGGCAGGCATGTCAGATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: ASGGQQLWRSAA*RDERQACQISS
Trigger: GGAAGAGATCTGACATGCCTGCCTCTCATCCCTCCATGCTGCTGACCGCCACAGCTGCTGGCCACCAGACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp GAGCTCCATGTAGCATGTGAGGTAGCCAGGCGGCACTaGTGTGATGCGGTTGTGGGCCAGGCTGAGGTTTCG +
Preference number: 6 (lower is better)
Translates to: ELHVACEVARRH*CDAVVGQAEVS
Trigger: CGAAACCTCAGCCTGGCCCACAACCGCATCACAGCAGTGCCGCCTGGCTACCTCACATGCTACATGGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp GGATCCGGTTTCGCAGCCACTTCAGCAGGGGTTCCATaGTGCAGCCACACACCCAGGGATTGCCACCGATCT +
Preference number: 6 (lower is better)
Translates to: GSGFAATSAGVP*CSHTPRDCHRS
Trigger: AGATCGGTGGCAATCCCTGGGTGTGTGGCTGCACCATGGAACCCCTGCTGAAGTGGCTGCGAAACCGGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CAA 90 bp TTGCTCCAGCGGTGGCAGCAGTTGGCAGTGATGCCCAGGAGGAAGTaGGTGGCCACAGAAGCAATGGAGACCACGAAGCCCACGAACGCA +
Preference number: 6 (lower is better)
Translates to: LLQRWQQLAVMPRRK*VATEAMETTKPTNA
Trigger: TGCGTTCGTGGGCTTCGTGGTCTCCATTGCTTCTGTGGCCACCAACTTCCTCCTGGGCATCACTGCCAACTGCTGCCACCGCTGGAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp ACGGAGAATAGCCGCTGGCTGCTACAATCCACCACCTaGTTACGGCATGTGCAAAGGACGGGGCAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TENSRWLLQSTT*LRHVQRTGQLV
Trigger: CACCAGCTGCCCCGTCCTTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp TCCATTGGCAGGTCTGGGGGCACGGAGAATAGCCGCTaGCTGCTACAATCCACCACCTGGTTACGGCATGTG +
Preference number: 6 (lower is better)
Translates to: SIGRSGGTENSR*LLQSTTWLRHV
Trigger: CACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGTGCCCCCAGACCTGCCAATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CAA 72 bp AGGCAGGCATGTCAGATCTCTTCCTCTTCACTGGCCTaGCTCCAGCGGTGGCAGCAGTTGGCAGTGATGCCC +
Preference number: 6 (lower is better)
Translates to: RQACQISSSSLA*LQRWQQLAVMP
Trigger: GGGCATCACTGCCAACTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGGAAGAGATCTGACATGCCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CAA 90 bp AGGGATGAGAGGCAGGCATGTCAGATCTCTTCCTCTTCACTGGCCTaGCTCCAGCGGTGGCAGCAGTTGGCAGTGATGCCCAGGAGGAAG +
Preference number: 6 (lower is better)
Translates to: RDERQACQISSSSLA*LQRWQQLAVMPRRK
Trigger: CTTCCTCCTGGGCATCACTGCCAACTGCTGCCACCGCTGGAGCAAGGCCAGTGAAGAGGAAGAGATCTGACATGCCTGCCTCTCATCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 72 bp TGTGGTATCATGGCTAGGGACTTTCCCAGGAGCCTCTaGGCACCAGAGGGCTTCCTGAGATCCACGGGAGGT +
Preference number: 6 (lower is better)
Translates to: CGIMARDFPRSL*APEGFLRSTGG
Trigger: ACCTCCCGTGGATCTCAGGAAGCCCTCTGGTGCTCAGAGGCTCCTGGGAAAGTCCCTAGCCATGATACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS TCA 72 bp GCCCATGAGGACTGTGTCCATGGAATCGAGAGTCTGTaGCACAGGAAGGCAGCTACATCTGGGGCCAGCGTC +
Preference number: 6 (lower is better)
Translates to: AHEDCVHGIESL*HRKAATSGASV
Trigger: GACGCTGGCCCCAGATGTAGCTGCCTTCCTGTGTCACAGACTCTCGATTCCATGGACACAGTCCTCATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652194.1
CDS GCA 72 bp TTGGCAGGTCTGGGGGCACGGAGAATAGCCGCTGGCTaGTACAATCCACCACCTGGTTACGGCATGTGCAAA +
Preference number: 6 (lower is better)
Translates to: LAGLGARRIAAG*YNPPPGYGMCK
Trigger: TTTGCACATGCCGTAACCAGGTGGTGGATTGTAGCAGCCAGCGGCTATTCTCCGTGCCCCCAGACCTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS GCA 72 bp CACATGGCTGAAATTGTTGTAGCTCAGGTCCAAGTGTaGCAAGCGCTTGGCATGGAGGAAGAGGCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: HMAEIVVAQVQV*QALGMEEEAPG
Trigger: CCCCGGGGCCTCTTCCTCCATGCCAAGCGCTTGGCACACTTGGACCTGAGCTACAACAATTTCAGCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp AATTGTTGTAGCTCAGGTCCAAGTGTGCCAAGCGCTTaGCATGGAGGAAGAGGCCCCGGGGCAGCTCCATTA +
Preference number: 6 (lower is better)
Translates to: NCCSSGPSVPSA*HGGRGPGAAPL
Trigger: TAATGGAGCTGCCCCGGGGCCTCTTCCTCCATGCCAAGCGCTTGGCACACTTGGACCTGAGCTACAACAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS CCA 72 bp TGGCTCAGGTCGATGTGGACTAGCCCATGGGCCTCCTaGAACATGTCGGCTGGCACATGGCTGAAATTGTTG +
Preference number: 6 (lower is better)
Translates to: WLRSMWTSPWAS*NMSAGTWLKLL
Trigger: CAACAATTTCAGCCATGTGCCAGCCGACATGTTCCAGGAGGCCCATGGGCTAGTCCACATCGACCTGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 72 bp CATGGGCCTCCTGGAACATGTCGGCTGGCACATGGCTaGAATTGTTGTAGCTCAGGTCCAAGTGTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: HGPPGTCRLAHG*NCCSSGPSVPS
Trigger: GCTTGGCACACTTGGACCTGAGCTACAACAATTTCAGCCATGTGCCAGCCGACATGTTCCAGGAGGCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1
CDS TCA 72 bp CAGAAGCAATGGAGACCACGAAGCCCACGAACGCAATaGATAGGTAATCATCCAGGGTCAGGGTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: QKQWRPRSPRTQ*IGNHPGSGSGG
Trigger: GCCACCTGACCCTGACCCTGGATGATTACCTATTCATTGCGTTCGTGGGCTTCGTGGTCTCCATTGCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000497933.3
ENST00000652194.1