Pregenerated sensors for LRRC52 (Homo sapiens)
Ensembl gene IDs: ENSG00000162763Ensembl transcript IDs: ENST00000294818.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATGCCGCCCAGCTTGGTaGCTCTGTCGCTCGCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGCRPAW*LCRSLP Trigger: TGGGAGCGAGCGACAGAGCCACCAAGCTGGGCGGCA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGCGGGCTCTGTCCTCTaGTCCGAAGGCTGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWAGSVL*SEGCRW Trigger: CCACCGGCAGCCTTCGGATCAGAGGACAGAGCCCGC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGTTCCCCACCCGGGTaGTGGGCCACCCTGTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWGSPPG*WATLSA Trigger: AGCTGACAGGGTGGCCCATCACCCGGGTGGGGAACC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGCCCTGCCGCCCAGCTTaGTGGCTCTGTCGCTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWPCRPA*WLCRSL Trigger: GAGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGG...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGCGAGGCTCAATGCCCTaGCGCCCAGCTTGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWRGSMP*RPAWWL Trigger: GAGCCACCAAGCTGGGCGGCAGGGCATTGAGCCTCG...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAAAACGCGAGGCTCAATaGCCTGCCGCCCAGCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGKREAQ*PAAQLG Trigger: ACCAAGCTGGGCGGCAGGGCATTGAGCCTCGCGTTT...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATCGCTCCCAGACTGCTaGTGGAAGCTTGCCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGSLPDC*WKLAHL Trigger: CAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGCGCTCGCTCCCAGACTaGTGCTGGAAGCTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWRSLPD*CWKLAH Trigger: GTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCG...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGACCCACTTGGCAGCTTTaGAAGGTCTCACCCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGPTWQL*KVSPFP Trigger: GGGAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGG...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGCCCAGGGCCAGGGCCTaGAGCAAGGGACATAGTAAG | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWPRARA*SKGHSK Trigger: CTTACTATGTCCCTTGCTTCAGGCCCTGGCCCTGGG...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATGTGGTCCAGGTGCGTaGTGCACATGTATCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGCGPGA*CTCIGV Trigger: CACTCCGATACATGTGCATCACGCACCTGGACCACA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGAGCTCGTCTGGGTTTaGAAAATCCGCCGGCTGACT | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGELVWV*KIRRLT Trigger: AGTCAGCCGGCGGATTTTTCAAACCCAGACGAGCTC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGCACTGTCCAGGGTCTaGAAGCCGGTATTTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGALSRV*KPVFLR Trigger: CCTCAGAAATACCGGCTTGCAGACCCTGGACAGTGC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGACTGCTGCTGGAAGCTTaGCCACTTGGCAGCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGLLLEA*PLGSFE Trigger: TTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAG...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGCACATGTATCGGAGTaGGTTCCCCACCCGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWAHVSE*VPHPGD Trigger: ATCACCCGGGTGGGGAACCCACTCCGATACATGTGC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAAGGTTTCAATCTCTATaGCAGCTCCAAGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGRFQSL*QLQGGG Trigger: CCCACCACCTTGGAGCTGTCATAGAGATTGAAACCT...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATCTTTGTGGTCCAGGTaGGTGATGCACATGTATCGG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGSLWSR*VMHMYR Trigger: CCGATACATGTGCATCACGCACCTGGACCACAAAGA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAACAGGTGAGGGTTGTTaGCAATGTTCAGCTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGTGEGC*QCSAAP Trigger: TGGTGCAGCTGAACATTGCCAACAACCCTCACCTGT...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATCCAGAGTAGTGAGGTaGTATAAGGCAGCACTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGSRVVR*YKAALS Trigger: GGACAGTGCTGCCTTATACCACCTCACTACTCTGGA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGACCCTGTCAGCTCTGTaGGCTCCACACATGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWTLSAL*APHMWH Trigger: ATGCCACATGTGTGGAGCCCACAGAGCTGACAGGGT...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGAACTGAACAGAAATTaGAACGCGAGGCTCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGELNRN*NARLNA Trigger: GGCATTGAGCCTCGCGTTTCAATTTCTGTTCAGTTC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGCAAGCCGGTATTTCTaGGGTCCAGGTACCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWASRYF*GPGTSK Trigger: CTTTGAGGTACCTGGACCTCAGAAATACCGGCTTGC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGACTGAGGAGTCCTAGATaGATTGCTGGCAAACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGLRSPR*IAGKLV Trigger: CACTAGTTTGCCAGCAATGCATCTAGGACTCCTCAG...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGTTGGCAATGTTCAGCTaGACCAGGTTGCTGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWLAMFS*TRLLST Trigger: GGTGCTCAGCAACCTGGTGCAGCTGAACATTGCCAA...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGCCAGGAAAGAGCAGTTaGACTTCCAGGGGTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWPGKSS*TSRGFH Trigger: GTGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGG...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATGGGCTCCACACATGTaGCATTTAGATCATCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGWAPHM*HLDHLR Trigger: CCTCAGATGATCTAAATGCCACATGTGTGGAGCCCA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGAGATGCAGAAGCCGATaGGCAGCAGGAAGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWRCRSR*AAGRCS Trigger: ACTACATCTTCCTGCTGCTCATCGGCTTCTGCATCT...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGGGTATTCGGTTAACTaGTTCCCTGTGCAGATTACT | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGGYSVN*FPVQIT Trigger: AGTAATCTGCACAGGGAAGCAGTTAACCGAATACCC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGACCATTACAGGAGAACTaGACAGAAATTGAAACGCGA | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGPLQEN*TEIETR Trigger: TCGCGTTTCAATTTCTGTTCAGTTCTCCTGTAATGG...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAAATAAACAAGGTCACTaGGGAGTCCTAGATGCATTG | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGNKQGH*GVLDAL Trigger: CAATGCATCTAGGACTCCTCAGTGACCTTGTTTATT...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR GCA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATTAACTGCTTCCCTGTaGAGATTACTTCTTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGLTASL*RLLLGL Trigger: AAGCCCAAGAAGTAATCTGCACAGGGAAGCAGTTAA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGTGGTGTTGGCAAAGGTaGACTTGTGAAGCGATAACA | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWWCWQR*TCEAIT Trigger: TGTTATCGCTTCACAAGTTCACCTTTGCCAACACCA...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGACACTATTAAGAAGATaGCGAAGTCCAGGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWTLLRR*RSPGKS Trigger: GCTCTTTCCTGGACTTCGCCATCTTCTTAATAGTGT...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGTCTGAGGGGTCCATATaGAACACTATTAAGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWSEGSI*NTIKKM Trigger: CATCTTCTTAATAGTGTTCCATATGGACCCCTCAGA...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR TCA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGATTACTTCTTGGGCTTaGCACAGACAATTATTTGGA | + |
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Preference number: 4 (lower is better) Translates to: FILLEGFNLYDSSKVVGWITSWA*HRQLFG Trigger: TCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAAT...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 90 bp | CCCTGCCGCCCAGCTTGGTGGCTCTGTCGCTCGCTCCCAGACTGCTaGTGGAAGCTTGCCCACTTGGCAGCTTTGAAAGGTCTCACCCTT | + |
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Preference number: 5 (lower is better) Translates to: PCRPAWWLCRSLPDC*WKLAHLAALKGLTL Trigger: AAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 90 bp | ATGCCCTGCCGCCCAGCTTGGTGGCTCTGTCGCTCGCTCCCAGACTaGTGCTGGAAGCTTGCCCACTTGGCAGCTTTGAAAGGTCTCACC | + |
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Preference number: 5 (lower is better) Translates to: MPCRPAWWLCRSLPD*CWKLAHLAALKGLT Trigger: GGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 90 bp | GATGTAGTCTTTGTGGTCCAGGTGCGTGATGCACATGTATCGGAGTaGGTTCCCCACCCGGGTGATGGGCCACCCTGTCAGCTCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: DVVFVVQVRDAHVSE*VPHPGDGPPCQLCG Trigger: CCCACAGAGCTGACAGGGTGGCCCATCACCCGGGTGGGGAACCCACTCCGATACATGTGCATCACGCACCTGGACCACAAAGACTACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 90 bp | AGCTTGGTGGCTCTGTCGCTCGCTCCCAGACTGCTGCTGGAAGCTTaGCCACTTGGCAGCTTTGAAAGGTCTCACCCTTTCCCTGCGTTT | + |
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Preference number: 5 (lower is better) Translates to: SLVALSLAPRLLLEA*PLGSFERSHPFPAF Trigger: AAACGCAGGGAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCACCAAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGCCCTGCCGCCCAGCTaGGTGGCTCTGTCGCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGALPPS*VALSLA Trigger: AGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGGC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 90 bp | GTCTCCAGAGTAGTGAGGTGGTATAAGGCAGCACTGTCCAGGGTCTaGAAGCCGGTATTTCTGAGGTCCAGGTACCTCAAAGAGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VSRVVRWYKAALSRV*KPVFLRSRYLKEVV Trigger: CACCACCTCTTTGAGGTACCTGGACCTCAGAAATACCGGCTTGCAGACCCTGGACAGTGCTGCCTTATACCACCTCACTACTCTGGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS TCA 90 bp | CTTTGTGCAAAGCAATTTTCCATTACAGGAGAACTGAACAGAAATTaGAACGCGAGGCTCAATGCCCTGCCGCCCAGCTTGGTGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LCAKQFSITGELNRN*NARLNALPPSLVAL Trigger: CAGAGCCACCAAGCTGGGCGGCAGGGCATTGAGCCTCGCGTTTCAATTTCTGTTCAGTTCTCCTGTAATGGAAAATTGCTTTGCACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGACGAGCTCGTCTGGGTTaGAAAAATCCGCCGGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGRARLG*KNPPAD Trigger: GTCAGCCGGCGGATTTTTCAAACCCAGACGAGCTCG...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATTCAGCTGCACCAGGTaGCTGAGCACCGAGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGFSCTR*LSTEKV Trigger: CACTTTCTCGGTGCTCAGCAACCTGGTGCAGCTGAA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS TCA 90 bp | GGGTATTCGGTTAACTGCTTCCCTGTGCAGATTACTTCTTGGGCTTaGCACAGACAATTATTTGGACACTTTGACCCTGATACCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: GYSVNCFPVQITSWA*HRQLFGHFDPDTSP Trigger: GGGGCTGGTATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATCTGCACAGGGAAGCAGTTAACCGAATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATGGAAGCTTGCCCACTaGGCAGCTTTGAAAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGWKLAH*AALKGL Trigger: GAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAGAGATCGAGGTTAGGTaGTTGGAGCTGAGGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGEIEVR*LELRSR Trigger: CCTTGACCTCAGCTCCAACAACCTAACCTCGATCTC...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGATCCAGGAAAGAGCAGTaGCACTTCCAGGGGTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGSRKEQ*HFQGFP Trigger: TGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGGA...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 90 bp | CATTTAGATCATCTGAGGGGTCCATATGGAACACTATTAAGAAGATaGCGAAGTCCAGGAAAGAGCAGTTGCACTTCCAGGGGTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: HLDHLRGPYGTLLRR*RSPGKSSCTSRGFH Trigger: GTGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGGACTTCGCCATCTTCTTAATAGTGTTCCATATGGACCCCTCAGATGATCTAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGCCCACTTGGCAGCTTaGAAAGGTCTCACCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FILLEGFNLYDSSKVVGWAHLAA*KGLTLS Trigger: GGAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 90 bp | TGTTCAGGGGTATGTCAAGGGGGTATTCGGTTAACTGCTTCCCTGTaGAGATTACTTCTTGGGCTTGACACAGACAATTATTTGGACACT | + |
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Preference number: 5 (lower is better) Translates to: CSGVCQGGIRLTASL*RLLLGLDTDNYLDT Trigger: AGTGTCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATCTGCACAGGGAAGCAGTTAACCGAATACCCCCTTGACATACCCCTGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | ATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGGAAGAACTGAACAGAAATaGAAACGCGAGGCTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: ILLEGFNLYDSSKVVGWGRTEQK*KREAQC Trigger: GCATTGAGCCTCGCGTTTCAATTTCTGTTCAGTTCT...TCCCCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGACACAGACAATTATTaGGACACTTTGACCCTGATA | + |
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Preference number: 5 (lower is better) Translates to: FILLEGFNLYDSSKVVGWDTDNY*DTLTLI Trigger: TATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGTC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTTACTAGAAGGTTTCAATCTCTATGACAGCTCCAAGGTGGTGGGATGGGATTACTTCTTGGGCTaGACACAGACAATTATTTGG | + |
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Preference number: 5 (lower is better) Translates to: FILLEGFNLYDSSKVVGWDYFLG*TQTIIW Trigger: CCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATC...CCATCCCACCACCTTGGAGCTGTCATAGAGATTGAAACCTTCTAGTAAAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 72 bp | GAAACGCGAGGCTCAATGCCCTGCCGCCCAGCTTGGTaGCTCTGTCGCTCGCTCCCAGACTGCTGCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ETRGSMPCRPAW*LCRSLPDCCWK Trigger: CTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGGCATTGAGCCTCGCGTTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 72 bp | ATTGAAACGCGAGGCTCAATGCCCTGCCGCCCAGCTTaGTGGCTCTGTCGCTCGCTCCCAGACTGCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IETRGSMPCRPA*WLCRSLPDCCW Trigger: CCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCACCAAGCTGGGCGGCAGGGCATTGAGCCTCGCGTTTCAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 72 bp | TTTGTGGTCCAGGTGCGTGATGCACATGTATCGGAGTaGGTTCCCCACCCGGGTGATGGGCCACCCTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FVVQVRDAHVSE*VPHPGDGPPCQ Trigger: CTGACAGGGTGGCCCATCACCCGGGTGGGGAACCCACTCCGATACATGTGCATCACGCACCTGGACCACAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 72 bp | CGCTCGCTCCCAGACTGCTGCTGGAAGCTTGCCCACTaGGCAGCTTTGAAAGGTCTCACCCTTTCCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: RSLPDCCWKLAH*AALKGLTLSLR Trigger: ACGCAGGGAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 90 bp | TGGCTCTGTCGCTCGCTCCCAGACTGCTGCTGGAAGCTTGCCCACTaGGCAGCTTTGAAAGGTCTCACCCTTTCCCTGCGTTTGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: WLCRSLPDCCWKLAH*AALKGLTLSLRLQV Trigger: CACTTGCAAACGCAGGGAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 72 bp | GCTCTGTCGCTCGCTCCCAGACTGCTGCTGGAAGCTTaGCCACTTGGCAGCTTTGAAAGGTCTCACCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ALSLAPRLLLEA*PLGSFERSHPF Trigger: GAAAGGGTGAGACCTTTCAAAGCTGCCAAGTGGGCAAGCTTCCAGCAGCAGTCTGGGAGCGAGCGACAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 72 bp | AAGCTGAGGGAACTCCTGGACCGAGCTCGTCTGGGTTaGAAAAATCCGCCGGCTGACTTCCACCCTAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: KLRELLDRARLG*KNPPADFHPSP Trigger: GGGACTAGGGTGGAAGTCAGCCGGCGGATTTTTCAAACCCAGACGAGCTCGGTCCAGGAGTTCCCTCAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 90 bp | CAACTAAATAAGCTGAGGGAACTCCTGGACCGAGCTCGTCTGGGTTaGAAAAATCCGCCGGCTGACTTCCACCCTAGTCCCGGCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: QLNKLRELLDRARLG*KNPPADFHPSPGLV Trigger: GACGAGGCCGGGACTAGGGTGGAAGTCAGCCGGCGGATTTTTCAAACCCAGACGAGCTCGGTCCAGGAGTTCCCTCAGCTTATTTAGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS TCA 72 bp | AGGCAGCACTGTCCAGGGTCTGCAAGCCGGTATTTCTaGGGTCCAGGTACCTCAAAGAGGTGGTGTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: RQHCPGSASRYF*GPGTSKRWCWQ Trigger: TTGCCAACACCACCTCTTTGAGGTACCTGGACCTCAGAAATACCGGCTTGCAGACCCTGGACAGTGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 72 bp | TTTCCACTCAGAAACAGGGTCTCCAGAGTAGTGAGGTaGTATAAGGCAGCACTGTCCAGGGTCTGCAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: FPLRNRVSRVVR*YKAALSRVCKP Trigger: CGGCTTGCAGACCCTGGACAGTGCTGCCTTATACCACCTCACTACTCTGGAGACCCTGTTTCTGAGTGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CCA 72 bp | TGGGCCACCCTGTCAGCTCTGTGGGCTCCACACATGTaGCATTTAGATCATCTGAGGGGTCCATATGGAACA | + |
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Preference number: 6 (lower is better) Translates to: WATLSALWAPHM*HLDHLRGPYGT Trigger: TGTTCCATATGGACCCCTCAGATGATCTAAATGCCACATGTGTGGAGCCCACAGAGCTGACAGGGTGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 72 bp | GTAGTGAGGTGGTATAAGGCAGCACTGTCCAGGGTCTaGAAGCCGGTATTTCTGAGGTCCAGGTACCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VVRWYKAALSRV*KPVFLRSRYLK Trigger: TTTGAGGTACCTGGACCTCAGAAATACCGGCTTGCAGACCCTGGACAGTGCTGCCTTATACCACCTCACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 90 bp | GCTTTGTGCAAAGCAATTTTCCATTACAGGAGAACTGAACAGAAATaGAAACGCGAGGCTCAATGCCCTGCCGCCCAGCTTGGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ALCKAIFHYRRTEQK*KREAQCPAAQLGGS Trigger: AGAGCCACCAAGCTGGGCGGCAGGGCATTGAGCCTCGCGTTTCAATTTCTGTTCAGTTCTCCTGTAATGGAAAATTGCTTTGCACAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 72 bp | CTATTAAGAAGATGGCGAAGTCCAGGAAAGAGCAGTTaGACTTCCAGGGGTTTCCACTCAGAAACAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLRRWRSPGKSS*TSRGFHSETGS Trigger: AGACCCTGTTTCTGAGTGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGGACTTCGCCATCTTCTTAATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 72 bp | ACTATTAAGAAGATGGCGAAGTCCAGGAAAGAGCAGTaGCACTTCCAGGGGTTTCCACTCAGAAACAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: TIKKMAKSRKEQ*HFQGFPLRNRV Trigger: GACCCTGTTTCTGAGTGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGGACTTCGCCATCTTCTTAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 90 bp | ATATGGAACACTATTAAGAAGATGGCGAAGTCCAGGAAAGAGCAGTaGCACTTCCAGGGGTTTCCACTCAGAAACAGGGTCTCCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: IWNTIKKMAKSRKEQ*HFQGFPLRNRVSRV Trigger: TACTCTGGAGACCCTGTTTCTGAGTGGAAACCCCTGGAAGTGCAACTGCTCTTTCCTGGACTTCGCCATCTTCTTAATAGTGTTCCATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 90 bp | GCTTCCCTGTGCAGATTACTTCTTGGGCTTGACACAGACAATTATTaGGACACTTTGACCCTGATACCAGCCCCATTCCAAAGGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ASLCRLLLGLDTDNY*DTLTLIPAPFQRKR Trigger: TCTTTTCCTTTGGAATGGGGCTGGTATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATCTGCACAGGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS CAA 72 bp | TGCAGATTACTTCTTGGGCTTGACACAGACAATTATTaGGACACTTTGACCCTGATACCAGCCCCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CRLLLGLDTDNY*DTLTLIPAPFQ Trigger: TTGGAATGGGGCTGGTATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS TCA 72 bp | GTTAACTGCTTCCCTGTGCAGATTACTTCTTGGGCTTaGCACAGACAATTATTTGGACACTTTGACCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: VNCFPVQITSWA*HRQLFGHFDPD Trigger: ATCAGGGTCAAAGTGTCCAAATAATTGTCTGTGTCAAGCCCAAGAAGTAATCTGCACAGGGAAGCAGTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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| CDS GCA 72 bp | AGGGGCTCTGGAAAGAACTGTAACACTTTAGCTTTGTaGAAAGCAATTTTCCATTACAGGAGAACTGAACAG | + |
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Preference number: 6 (lower is better) Translates to: RGSGKNCNTLAL*KAIFHYRRTEQ Trigger: CTGTTCAGTTCTCCTGTAATGGAAAATTGCTTTGCACAAAGCTAAAGTGTTACAGTTCTTTCCAGAGCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000294818.2 |
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